Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:18:17 (468979): wrapper (7.7.26015): starting
22:18:17 (468979): wrapper: running run_atlas (--nthreads 4)
[2024-04-27 22:18:17] Arguments: --nthreads 4
[2024-04-27 22:18:17] Threads: 4
[2024-04-27 22:18:17] Checking for CVMFS
[2024-04-27 22:18:17] No cvmfs_config command found, will try listing directly
[2024-04-27 22:18:17] CVMFS is ok
[2024-04-27 22:18:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-27 22:18:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-27 22:18:17] Further information can be found at the LHC@home message board.
[2024-04-27 22:18:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-27 22:18:17] Checking for apptainer binary...
[2024-04-27 22:18:17] which: no apptainer in ((null))
[2024-04-27 22:18:17] apptainer is not installed, using version from CVMFS
[2024-04-27 22:18:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-27 22:18:18] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot76/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2024-04-27 22:18:18] apptainer works
[2024-04-27 22:18:18] Set ATHENA_PROC_NUMBER=4
[2024-04-27 22:18:18] Set ATHENA_CORE_NUMBER=4
[2024-04-27 22:18:18] Starting ATLAS job with PandaID=6181372490
[2024-04-27 22:18:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot76/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-28 01:16:52]  *** The last 200 lines of the pilot log: ***
[2024-04-28 01:16:52]  filesize=292719
[2024-04-28 01:16:52]  filetype=log
[2024-04-28 01:16:52]  guid=26ea60af-9ff3-4c46-9231-22925eb4edde
[2024-04-28 01:16:52]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-28 01:16:52]  is_tar=False
[2024-04-28 01:16:52]  lfn=log.38204279._017085.job.log.tgz.1
[2024-04-28 01:16:52]  mtime=0
[2024-04-28 01:16:52]  protocol_id=None
[2024-04-28 01:16:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-28 01:16:52]  replicas=None
[2024-04-28 01:16:52]  scope=mc23_13p6TeV
[2024-04-28 01:16:52]  status=None
[2024-04-28 01:16:52]  status_code=0
[2024-04-28 01:16:52]  storage_token=
[2024-04-28 01:16:52]  surl=/scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6181372490/log.38204279._017085.job.log.tgz.1
[2024-04-28 01:16:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ce/6a/log.38204279._017085.job.log.tgz.1
[2024-04-28 01:16:52]  workdir=None
[2024-04-28 01:16:52] ]
[2024-04-28 01:16:52] 2024-04-27 23:16:28,581 | INFO     | transferring file log.38204279._017085.job.log.tgz.1 from /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6181372490/log.38204279._017085.job.log.tgz.1 to /scratch/b
[2024-04-28 01:16:52] 2024-04-27 23:16:28,581 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6181372490/log.38204279._017085.job.log.tgz.1 /scratch/boinc/var/slot76/slots/0/lo
[2024-04-28 01:16:52] 2024-04-27 23:16:28,598 | INFO     | adding to output.list: log.38204279._017085.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ce/6a/log.38204279._017085.job.log.tg
[2024-04-28 01:16:52] 2024-04-27 23:16:28,598 | INFO     | summary of transferred files:
[2024-04-28 01:16:52] 2024-04-27 23:16:28,599 | INFO     |  -- lfn=log.38204279._017085.job.log.tgz.1, status_code=0, status=transferred
[2024-04-28 01:16:52] 2024-04-27 23:16:28,599 | INFO     | stage-out finished correctly
[2024-04-28 01:16:52] 2024-04-27 23:16:28,886 | INFO     | monitor loop #808: job 0:6181372490 is in state 'finished'
[2024-04-28 01:16:52] 2024-04-27 23:16:28,887 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-28 01:16:52] 2024-04-27 23:16:31,389 | INFO     | monitor loop #809: job 0:6181372490 is in state 'finished'
[2024-04-28 01:16:52] 2024-04-27 23:16:31,390 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-28 01:16:52] 2024-04-27 23:16:31,611 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-28 01:16:52] 2024-04-27 23:16:31,710 | INFO     | job 6181372490 has state=finished
[2024-04-28 01:16:52] 2024-04-27 23:16:31,710 | INFO     | preparing for final server update for job 6181372490 in state='finished'
[2024-04-28 01:16:52] 2024-04-27 23:16:31,711 | INFO     | this job has now completed (state=finished)
[2024-04-28 01:16:52] 2024-04-27 23:16:31,711 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-28 01:16:52] 2024-04-27 23:16:31,711 | INFO     | job 6181372490 has finished - writing final server update
[2024-04-28 01:16:52] 2024-04-27 23:16:31,711 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_37024/.job.ad'
[2024-04-28 01:16:52] 2024-04-27 23:16:31,711 | INFO     | total number of processed events: 400 (read)
[2024-04-28 01:16:52] 2024-04-27 23:16:31,719 | INFO     | executing command: lscpu
[2024-04-28 01:16:52] 2024-04-27 23:16:31,759 | INFO     | found 64 cores (32 cores per socket, 2 sockets)
[2024-04-28 01:16:52] 2024-04-27 23:16:31,760 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-28 01:16:52] 2024-04-27 23:16:31,799 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-28 01:16:52] 2024-04-27 23:16:33,894 | INFO     | monitor loop #810: job 0:6181372490 is in state 'finished'
[2024-04-28 01:16:52] 2024-04-27 23:16:33,894 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-28 01:16:52] 2024-04-27 23:16:36,396 | INFO     | monitor loop #811: job 0:6181372490 is in state 'finished'
[2024-04-28 01:16:52] 2024-04-27 23:16:36,397 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-28 01:16:52] 2024-04-27 23:16:36,743 | INFO     | CPU arch script returned: x86-64-v3
[2024-04-28 01:16:52] 2024-04-27 23:16:36,744 | INFO     | using path: /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6181372490/memory_monitor_summary.json (trf name=prmon)
[2024-04-28 01:16:52] 2024-04-27 23:16:36,745 | INFO     | extracted standard info from prmon json
[2024-04-28 01:16:52] 2024-04-27 23:16:36,745 | INFO     | extracted standard memory fields from prmon json
[2024-04-28 01:16:52] 2024-04-27 23:16:36,745 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-28 01:16:52] 2024-04-27 23:16:36,745 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-28 01:16:52] 2024-04-27 23:16:36,749 | INFO     | fitting pss+swap vs Time
[2024-04-28 01:16:52] 2024-04-27 23:16:36,751 | INFO     | current chi2=3.924840210281183 (change=0.022909521643848553 %)
[2024-04-28 01:16:52] 2024-04-27 23:16:36,751 | INFO     | right removable region: 169
[2024-04-28 01:16:52] 2024-04-27 23:16:36,752 | INFO     | current chi2=1.5110871633347827 (change=61.50821690685318 %)
[2024-04-28 01:16:52] 2024-04-27 23:16:36,754 | INFO     | current chi2=0.05075925314451339 (change=96.64087854253927 %)
[2024-04-28 01:16:52] 2024-04-27 23:16:36,755 | INFO     | current chi2=0.0015943309712657078 (change=96.85903382635165 %)
[2024-04-28 01:16:52] 2024-04-27 23:16:36,756 | INFO     | current chi2=0.001531524963958873 (change=3.93933307693159 %)
[2024-04-28 01:16:52] 2024-04-27 23:16:36,756 | INFO     | left removable region: 40
[2024-04-28 01:16:52] 2024-04-27 23:16:36,757 | INFO     | current memory leak: -0.46 B/s (using 129 data points, chi2=0.00)
[2024-04-28 01:16:52] 2024-04-27 23:16:36,757 | INFO     | ..............................
[2024-04-28 01:16:52] 2024-04-27 23:16:36,757 | INFO     | . Timing measurements:
[2024-04-28 01:16:52] 2024-04-27 23:16:36,757 | INFO     | . get job = 0 s
[2024-04-28 01:16:52] 2024-04-27 23:16:36,757 | INFO     | . initial setup = 1 s
[2024-04-28 01:16:52] 2024-04-27 23:16:36,757 | INFO     | . payload setup = 7 s
[2024-04-28 01:16:52] 2024-04-27 23:16:36,758 | INFO     | . stage-in = 0 s
[2024-04-28 01:16:52] 2024-04-27 23:16:36,758 | INFO     | . payload execution = 10649 s
[2024-04-28 01:16:52] 2024-04-27 23:16:36,758 | INFO     | . stage-out = 0 s
[2024-04-28 01:16:52] 2024-04-27 23:16:36,758 | INFO     | . log creation = 0 s
[2024-04-28 01:16:52] 2024-04-27 23:16:36,758 | INFO     | ..............................
[2024-04-28 01:16:52] 2024-04-27 23:16:36,836 | INFO     | 
[2024-04-28 01:16:52] 2024-04-27 23:16:36,836 | INFO     | job summary report
[2024-04-28 01:16:52] 2024-04-27 23:16:36,837 | INFO     | --------------------------------------------------
[2024-04-28 01:16:52] 2024-04-27 23:16:36,837 | INFO     | PanDA job id: 6181372490
[2024-04-28 01:16:52] 2024-04-27 23:16:36,837 | INFO     | task id: 38204279
[2024-04-28 01:16:52] 2024-04-27 23:16:36,837 | INFO     | errors: (none)
[2024-04-28 01:16:52] 2024-04-27 23:16:36,837 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-28 01:16:52] 2024-04-27 23:16:36,837 | INFO     | pilot state: finished 
[2024-04-28 01:16:52] 2024-04-27 23:16:36,837 | INFO     | transexitcode: 0
[2024-04-28 01:16:52] 2024-04-27 23:16:36,837 | INFO     | exeerrorcode: 0
[2024-04-28 01:16:52] 2024-04-27 23:16:36,837 | INFO     | exeerrordiag: 
[2024-04-28 01:16:52] 2024-04-27 23:16:36,837 | INFO     | exitcode: 0
[2024-04-28 01:16:52] 2024-04-27 23:16:36,837 | INFO     | exitmsg: OK
[2024-04-28 01:16:52] 2024-04-27 23:16:36,837 | INFO     | cpuconsumptiontime: 39922 s
[2024-04-28 01:16:52] 2024-04-27 23:16:36,837 | INFO     | nevents: 400
[2024-04-28 01:16:52] 2024-04-27 23:16:36,838 | INFO     | neventsw: 0
[2024-04-28 01:16:52] 2024-04-27 23:16:36,838 | INFO     | pid: 494783
[2024-04-28 01:16:52] 2024-04-27 23:16:36,838 | INFO     | pgrp: 494783
[2024-04-28 01:16:52] 2024-04-27 23:16:36,838 | INFO     | corecount: 4
[2024-04-28 01:16:52] 2024-04-27 23:16:36,838 | INFO     | event service: False
[2024-04-28 01:16:52] 2024-04-27 23:16:36,838 | INFO     | sizes: {0: 2375640, 1: 2375640, 6: 2375874, 11: 2375902, 10660: 2404844, 10662: 2413826, 10665: 2414010, 10670: 2414180}
[2024-04-28 01:16:52] 2024-04-27 23:16:36,838 | INFO     | --------------------------------------------------
[2024-04-28 01:16:52] 2024-04-27 23:16:36,838 | INFO     | 
[2024-04-28 01:16:52] 2024-04-27 23:16:36,838 | INFO     | executing command: ls -lF /scratch/boinc/var/slot76/slots/0
[2024-04-28 01:16:52] 2024-04-27 23:16:36,862 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-28 01:16:52] 2024-04-27 23:16:36,863 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-28 01:16:52] 2024-04-27 23:16:36,863 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-28 01:16:52] 2024-04-27 23:16:36,863 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-28 01:16:52] 2024-04-27 23:16:36,863 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-28 01:16:52] 2024-04-27 23:16:36,863 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-28 01:16:52] 2024-04-27 23:16:36,863 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-28 01:16:52] 2024-04-27 23:16:36,863 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-28 01:16:52] 2024-04-27 23:16:36,863 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-28 01:16:52] 2024-04-27 23:16:36,863 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-28 01:16:52] 2024-04-27 23:16:36,864 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-28 01:16:52] 2024-04-27 23:16:36,864 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-28 01:16:52] 2024-04-27 23:16:36,864 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-28 01:16:52] 2024-04-27 23:16:36,864 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-28 01:16:52] 2024-04-27 23:16:36,864 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-28 01:16:52] 2024-04-27 23:16:36,864 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-28 01:16:52] 2024-04-27 23:16:36,864 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-28 01:16:52] 2024-04-27 23:16:36,864 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-28 01:16:52] 2024-04-27 23:16:36,864 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-28 01:16:52] 2024-04-27 23:16:36,864 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-28 01:16:52] 2024-04-27 23:16:36,865 | INFO     | job 6181372490 has completed (purged errors)
[2024-04-28 01:16:52] 2024-04-27 23:16:36,865 | INFO     | overall cleanup function is called
[2024-04-28 01:16:52] 2024-04-27 23:16:37,872 | INFO     | --- collectZombieJob: --- 10, [494783]
[2024-04-28 01:16:52] 2024-04-27 23:16:37,873 | INFO     | zombie collector waiting for pid 494783
[2024-04-28 01:16:52] 2024-04-27 23:16:37,873 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-28 01:16:52] 2024-04-27 23:16:38,877 | INFO     | collected zombie processes
[2024-04-28 01:16:52] 2024-04-27 23:16:38,878 | INFO     | will now attempt to kill all subprocesses of pid=494783
[2024-04-28 01:16:52] 2024-04-27 23:16:39,104 | INFO     | process IDs to be killed: [494783] (in reverse order)
[2024-04-28 01:16:52] 2024-04-27 23:16:39,293 | WARNING  | found no corresponding commands to process id(s)
[2024-04-28 01:16:52] 2024-04-27 23:16:39,293 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-28 01:16:52] 2024-04-27 23:16:39,309 | INFO     | did not find any defunct processes belonging to 494783
[2024-04-28 01:16:52] 2024-04-27 23:16:39,318 | INFO     | did not find any defunct processes belonging to 494783
[2024-04-28 01:16:52] 2024-04-27 23:16:39,318 | INFO     | ready for new job
[2024-04-28 01:16:52] 2024-04-27 23:16:39,318 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-28 01:16:52] 2024-04-27 23:16:39,320 | INFO     | *************************************
[2024-04-28 01:16:52] 2024-04-27 23:16:39,320 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-28 01:16:52] 2024-04-27 23:16:39,320 | INFO     | *************************************
[2024-04-28 01:16:52] 2024-04-27 23:16:39,320 | INFO     | 
[2024-04-28 01:16:52] 2024-04-27 23:16:39,325 | INFO     | architecture information:
[2024-04-28 01:16:52] 2024-04-27 23:16:39,325 | INFO     | executing command: cat /etc/os-release
[2024-04-28 01:16:52] 2024-04-27 23:16:39,343 | INFO     | cat /etc/os-release:
[2024-04-28 01:16:52] NAME="CentOS Linux"
[2024-04-28 01:16:52] VERSION="7 (Core)"
[2024-04-28 01:16:52] ID="centos"
[2024-04-28 01:16:52] ID_LIKE="rhel fedora"
[2024-04-28 01:16:52] VERSION_ID="7"
[2024-04-28 01:16:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-28 01:16:52] ANSI_COLOR="0;31"
[2024-04-28 01:16:52] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-28 01:16:52] HOME_URL="https://www.centos.org/"
[2024-04-28 01:16:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-28 01:16:52] 
[2024-04-28 01:16:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-28 01:16:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-28 01:16:52] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-28 01:16:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-28 01:16:52] 
[2024-04-28 01:16:52] 2024-04-27 23:16:39,344 | INFO     | *************************************
[2024-04-28 01:16:52] 2024-04-27 23:16:39,847 | INFO     | executing command: df -mP /scratch/boinc/var/slot76/slots/0
[2024-04-28 01:16:52] 2024-04-27 23:16:39,870 | INFO     | sufficient remaining disk space (3024075358208 B)
[2024-04-28 01:16:52] 2024-04-27 23:16:39,870 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-28 01:16:52] 2024-04-27 23:16:39,871 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-28 01:16:52] 2024-04-27 23:16:39,871 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-28 01:16:52] 2024-04-27 23:16:39,871 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-28 01:16:52] 2024-04-27 23:16:39,872 | INFO     | found 0 job(s) in 20 queues
[2024-04-28 01:16:52] 2024-04-27 23:16:39,872 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-28 01:16:52] 2024-04-27 23:16:39,872 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-28 01:16:52] 2024-04-27 23:16:39,904 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-28 01:16:52] 2024-04-27 23:16:39,905 | INFO     | aborting loop
[2024-04-28 01:16:52] 2024-04-27 23:16:40,472 | INFO     | all payload control threads have been joined
[2024-04-28 01:16:52] 2024-04-27 23:16:40,567 | INFO     | all job control threads have been joined
[2024-04-28 01:16:52] 2024-04-27 23:16:40,875 | INFO     | [job] retrieve thread has finished
[2024-04-28 01:16:52] 2024-04-27 23:16:40,910 | INFO     | [job] job monitor thread has finished
[2024-04-28 01:16:52] 2024-04-27 23:16:40,921 | INFO     | all data control threads have been joined
[2024-04-28 01:16:52] 2024-04-27 23:16:41,153 | INFO     | [job] create_data_payload thread has finished
[2024-04-28 01:16:52] 2024-04-27 23:16:41,200 | INFO     | [payload] execute_payloads thread has finished
[2024-04-28 01:16:52] 2024-04-27 23:16:41,471 | INFO     | [data] copytool_in thread has finished
[2024-04-28 01:16:52] 2024-04-27 23:16:41,477 | INFO     | [payload] control thread has finished
[2024-04-28 01:16:52] 2024-04-27 23:16:41,572 | INFO     | [job] control thread has finished
[2024-04-28 01:16:52] 2024-04-27 23:16:41,837 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-28 01:16:52] 2024-04-27 23:16:41,845 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-28 01:16:52] 2024-04-27 23:16:41,877 | INFO     | [data] copytool_out thread has finished
[2024-04-28 01:16:52] 2024-04-27 23:16:41,927 | INFO     | [data] control thread has finished
[2024-04-28 01:16:52] 2024-04-27 23:16:41,951 | INFO     | [payload] failed_post thread has finished
[2024-04-28 01:16:52] 2024-04-27 23:16:42,158 | INFO     | [job] validate thread has finished
[2024-04-28 01:16:52] 2024-04-27 23:16:42,221 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-28 01:16:52] 2024-04-27 23:16:42,236 | INFO     | [payload] validate_post thread has finished
[2024-04-28 01:16:52] 2024-04-27 23:16:42,239 | INFO     | [payload] validate_pre thread has finished
[2024-04-28 01:16:52] 2024-04-27 23:16:42,850 | INFO     | [job] queue monitor thread has finished
[2024-04-28 01:16:52] 2024-04-27 23:16:46,226 | INFO     | [data] queue_monitor thread has finished
[2024-04-28 01:16:52] 2024-04-27 23:16:46,504 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47429719979072)>', '<ExcThread(monitor, started 47429887010560)>']
[2024-04-28 01:16:52] 2024-04-27 23:16:46,907 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-28 01:16:52] 2024-04-27 23:16:46,908 | INFO     | [monitor] control thread has ended
[2024-04-28 01:16:52] 2024-04-27 23:16:51,530 | INFO     | all workflow threads have been joined
[2024-04-28 01:16:52] 2024-04-27 23:16:51,530 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-28 01:16:52] 2024-04-27 23:16:51,530 | INFO     | traces error code: 0
[2024-04-28 01:16:52] 2024-04-27 23:16:51,531 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-28 01:16:52] 2024-04-27 23:16:51,643 [wrapper] ==== pilot stdout END ====
[2024-04-28 01:16:52] 2024-04-27 23:16:51,646 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-28 01:16:52] 2024-04-27 23:16:51,648 [wrapper] pilotpid: 476706
[2024-04-28 01:16:52] 2024-04-27 23:16:51,651 [wrapper] Pilot exit status: 0
[2024-04-28 01:16:52] 2024-04-27 23:16:51,689 [wrapper] pandaids: 6181372490
[2024-04-28 01:16:52] 2024-04-27 23:16:51,799 [wrapper] cleanup: SIGTERM to supervisor_pilot 1495891 476708
[2024-04-28 01:16:52] 2024-04-27 23:16:51,800 [wrapper] Test setup, not cleaning
[2024-04-28 01:16:52] 2024-04-27 23:16:51,802 [wrapper] ==== wrapper stdout END ====
[2024-04-28 01:16:52] 2024-04-27 23:16:51,804 [wrapper] ==== wrapper stderr END ====
[2024-04-28 01:16:52] 2024-04-27 23:16:51,808 [wrapper] apfmon messages muted
[2024-04-28 01:16:52]  *** Error codes and diagnostics ***
[2024-04-28 01:16:52]     "exeErrorCode": 0,
[2024-04-28 01:16:52]     "exeErrorDiag": "",
[2024-04-28 01:16:52]     "pilotErrorCode": 0,
[2024-04-28 01:16:52]     "pilotErrorDiag": "",
[2024-04-28 01:16:52]  *** Listing of results directory ***
[2024-04-28 01:16:52] total 618540
[2024-04-28 01:16:52] -rw-r--r-- 1 boinc boinc    462745 Apr 20 20:09 pilot3.tar.gz
[2024-04-28 01:16:52] -rw-r--r-- 1 boinc boinc      6720 Apr 20 20:19 queuedata.json
[2024-04-28 01:16:52] -rwx------ 1 boinc boinc     32211 Apr 20 20:19 runpilot2-wrapper.sh
[2024-04-28 01:16:52] -rw-r--r-- 1 boinc boinc       100 Apr 27 22:18 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-28 01:16:52] -rwxr-xr-x 1 boinc boinc      7986 Apr 27 22:18 run_atlas
[2024-04-28 01:16:52] -rw-r--r-- 1 boinc boinc       105 Apr 27 22:18 job.xml
[2024-04-28 01:16:52] -rw-r--r-- 1 boinc boinc      6642 Apr 27 22:18 init_data.xml
[2024-04-28 01:16:52] -rw-r--r-- 2 boinc boinc 451444038 Apr 27 22:18 EVNT.38204277._000662.pool.root.1
[2024-04-28 01:16:52] drwxrwx--x 2 boinc boinc      4096 Apr 27 22:18 shared
[2024-04-28 01:16:52] -rw-r--r-- 2 boinc boinc    474801 Apr 27 22:18 input.tar.gz
[2024-04-28 01:16:52] -rw-r--r-- 2 boinc boinc     17537 Apr 27 22:18 start_atlas.sh
[2024-04-28 01:16:52] -rw-r--r-- 1 boinc boinc         0 Apr 27 22:18 boinc_lockfile
[2024-04-28 01:16:52] -rw-r--r-- 1 boinc boinc      2583 Apr 27 22:18 pandaJob.out
[2024-04-28 01:16:52] -rw------- 1 boinc boinc       424 Apr 27 22:18 setup.sh.local
[2024-04-28 01:16:52] -rw------- 1 boinc boinc    997146 Apr 27 22:18 agis_schedconf.cvmfs.json
[2024-04-28 01:16:52] -rw------- 1 boinc boinc         0 Apr 27 22:18 agis_ddmendpoints.agis.ALL.json
[2024-04-28 01:16:52] -rw------- 1 boinc boinc   1315307 Apr 27 22:18 cric_ddmendpoints.json
[2024-04-28 01:16:52] drwx------ 4 boinc boinc      4096 Apr 27 22:18 pilot3
[2024-04-28 01:16:52] -rw------- 1 boinc boinc 175868827 Apr 28 01:16 HITS.38204279._017085.pool.root.1
[2024-04-28 01:16:52] -rw------- 1 boinc boinc        95 Apr 28 01:16 pilot_heartbeat.json
[2024-04-28 01:16:52] -rw-r--r-- 1 boinc boinc       532 Apr 28 01:16 boinc_task_state.xml
[2024-04-28 01:16:52] -rw------- 1 boinc boinc      1041 Apr 28 01:16 memory_monitor_summary.json
[2024-04-28 01:16:52] -rw------- 1 boinc boinc    292719 Apr 28 01:16 log.38204279._017085.job.log.tgz.1
[2024-04-28 01:16:52] -rw-r--r-- 1 boinc boinc      8192 Apr 28 01:16 boinc_mmap_file
[2024-04-28 01:16:52] -rw-r--r-- 1 boinc boinc        28 Apr 28 01:16 wrapper_checkpoint.txt
[2024-04-28 01:16:52] -rw------- 1 boinc boinc      7695 Apr 28 01:16 heartbeat.json
[2024-04-28 01:16:52] -rw------- 1 boinc boinc      4345 Apr 28 01:16 pilotlog.txt
[2024-04-28 01:16:52] -rw------- 1 boinc boinc    999516 Apr 28 01:16 log.38204279._017085.job.log.1
[2024-04-28 01:16:52] -rw------- 1 boinc boinc       357 Apr 28 01:16 output.list
[2024-04-28 01:16:52] -rw-r--r-- 1 boinc boinc       620 Apr 28 01:16 runtime_log
[2024-04-28 01:16:52] -rw------- 1 boinc boinc   1310720 Apr 28 01:16 result.tar.gz
[2024-04-28 01:16:52] -rw-r--r-- 1 boinc boinc     11410 Apr 28 01:16 runtime_log.err
[2024-04-28 01:16:52] -rw------- 1 boinc boinc       658 Apr 28 01:16 5QfMDmkUUI5n9Rq4apoT9bVoABFKDmABFKDmtztZDmOiJKDmjBvKln.diag
[2024-04-28 01:16:52] -rw-r--r-- 1 boinc boinc     21350 Apr 28 01:16 stderr.txt
[2024-04-28 01:16:52] HITS file was successfully produced:
[2024-04-28 01:16:52] -rw------- 1 boinc boinc 175868827 Apr 28 01:16 shared/HITS.pool.root.1
[2024-04-28 01:16:52]  *** Contents of shared directory: ***
[2024-04-28 01:16:52] total 614384
[2024-04-28 01:16:52] -rw-r--r-- 2 boinc boinc 451444038 Apr 27 22:18 ATLAS.root_0
[2024-04-28 01:16:52] -rw-r--r-- 2 boinc boinc    474801 Apr 27 22:18 input.tar.gz
[2024-04-28 01:16:52] -rw-r--r-- 2 boinc boinc     17537 Apr 27 22:18 start_atlas.sh
[2024-04-28 01:16:52] -rw------- 1 boinc boinc 175868827 Apr 28 01:16 HITS.pool.root.1
[2024-04-28 01:16:52] -rw------- 1 boinc boinc   1310720 Apr 28 01:16 result.tar.gz
01:16:54 (468979): run_atlas exited; CPU time 39655.881483
01:16:54 (468979): called boinc_finish(0)

</stderr_txt>
]]>

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