Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:50:06 (2631511): wrapper (7.7.26015): starting
19:50:06 (2631511): wrapper: running run_atlas (--nthreads 4)
[2024-04-25 19:50:06] Arguments: --nthreads 4
[2024-04-25 19:50:06] Threads: 4
[2024-04-25 19:50:06] Checking for CVMFS
[2024-04-25 19:50:06] No cvmfs_config command found, will try listing directly
[2024-04-25 19:50:06] CVMFS is ok
[2024-04-25 19:50:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-25 19:50:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-25 19:50:06] Further information can be found at the LHC@home message board.
[2024-04-25 19:50:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-25 19:50:06] Checking for apptainer binary...
[2024-04-25 19:50:06] which: no apptainer in ((null))
[2024-04-25 19:50:06] apptainer is not installed, using version from CVMFS
[2024-04-25 19:50:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-25 19:50:07] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2024-04-25 19:50:07] apptainer works
[2024-04-25 19:50:07] Set ATHENA_PROC_NUMBER=4
[2024-04-25 19:50:07] Set ATHENA_CORE_NUMBER=4
[2024-04-25 19:50:07] Starting ATLAS job with PandaID=6181371825
[2024-04-25 19:50:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-26 00:00:00]  *** The last 200 lines of the pilot log: ***
[2024-04-26 00:00:00]  domain=
[2024-04-26 00:00:00]  filesize=331911
[2024-04-26 00:00:00]  filetype=log
[2024-04-26 00:00:00]  guid=597c0ac4-d1ce-4b92-8d7d-77a7f4bf1362
[2024-04-26 00:00:00]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-26 00:00:00]  is_tar=False
[2024-04-26 00:00:00]  lfn=log.38204279._017027.job.log.tgz.1
[2024-04-26 00:00:00]  mtime=0
[2024-04-26 00:00:00]  protocol_id=None
[2024-04-26 00:00:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-26 00:00:00]  replicas=None
[2024-04-26 00:00:00]  scope=mc23_13p6TeV
[2024-04-26 00:00:00]  status=None
[2024-04-26 00:00:00]  status_code=0
[2024-04-26 00:00:00]  storage_token=
[2024-04-26 00:00:00]  surl=/scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6181371825/log.38204279._017027.job.log.tgz.1
[2024-04-26 00:00:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/36/0d/log.38204279._017027.job.log.tgz.1
[2024-04-26 00:00:00]  workdir=None
[2024-04-26 00:00:00] ]
[2024-04-26 00:00:00] 2024-04-25 21:59:32,803 | INFO     | transferring file log.38204279._017027.job.log.tgz.1 from /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6181371825/log.38204279._017027.job.log.tgz.1 to /scratch/b
[2024-04-26 00:00:00] 2024-04-25 21:59:32,803 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6181371825/log.38204279._017027.job.log.tgz.1 /scratch/boinc/var/slot32/slots/0/lo
[2024-04-26 00:00:00] 2024-04-25 21:59:32,818 | INFO     | adding to output.list: log.38204279._017027.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/36/0d/log.38204279._017027.job.log.tg
[2024-04-26 00:00:00] 2024-04-25 21:59:32,819 | INFO     | summary of transferred files:
[2024-04-26 00:00:00] 2024-04-25 21:59:32,819 | INFO     |  -- lfn=log.38204279._017027.job.log.tgz.1, status_code=0, status=transferred
[2024-04-26 00:00:00] 2024-04-25 21:59:32,819 | INFO     | stage-out finished correctly
[2024-04-26 00:00:00] 2024-04-25 21:59:32,876 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-26 00:00:00] 2024-04-25 21:59:35,204 | INFO     | job 6181371825 has state=finished
[2024-04-26 00:00:00] 2024-04-25 21:59:35,204 | INFO     | preparing for final server update for job 6181371825 in state='finished'
[2024-04-26 00:00:00] 2024-04-25 21:59:35,224 | INFO     | executing command: curl --connect-timeout 20 --max-time 120 -H "Content-Type: application/json" -X POST --upload-file /scratch/boinc/var/slot32/slots/0/PanDA_Pilot
[2024-04-26 00:00:00] 2024-04-25 21:59:36,544 | INFO     | this job has now completed (state=finished)
[2024-04-26 00:00:00] 2024-04-25 21:59:36,545 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-26 00:00:00] 2024-04-25 21:59:36,545 | INFO     | job 6181371825 has finished - writing final server update
[2024-04-26 00:00:00] 2024-04-25 21:59:36,545 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4090184/.job.ad'
[2024-04-26 00:00:00] 2024-04-25 21:59:36,545 | INFO     | total number of processed events: 400 (read)
[2024-04-26 00:00:00] 2024-04-25 21:59:36,548 | INFO     | executing command: lscpu
[2024-04-26 00:00:00] 2024-04-25 21:59:36,579 | INFO     | found 20 cores (10 cores per socket, 2 sockets)
[2024-04-26 00:00:00] 2024-04-25 21:59:36,580 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-26 00:00:00] 2024-04-25 21:59:36,606 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-26 00:00:00] 2024-04-25 21:59:39,750 | INFO     | CPU arch script returned: x86-64-v3
[2024-04-26 00:00:00] 2024-04-25 21:59:39,750 | INFO     | using path: /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6181371825/memory_monitor_summary.json (trf name=prmon)
[2024-04-26 00:00:00] 2024-04-25 21:59:39,751 | INFO     | extracted standard info from prmon json
[2024-04-26 00:00:00] 2024-04-25 21:59:39,751 | INFO     | extracted standard memory fields from prmon json
[2024-04-26 00:00:00] 2024-04-25 21:59:39,756 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-26 00:00:00] 2024-04-25 21:59:39,757 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-26 00:00:00] 2024-04-25 21:59:39,761 | INFO     | fitting pss+swap vs Time
[2024-04-26 00:00:00] 2024-04-25 21:59:39,764 | INFO     | current chi2=3.770976231590298 (change=0.01478572954025014 %)
[2024-04-26 00:00:00] 2024-04-25 21:59:39,764 | INFO     | right removable region: 239
[2024-04-26 00:00:00] 2024-04-25 21:59:39,767 | INFO     | current chi2=1.4064003876894735 (change=62.710121868392775 %)
[2024-04-26 00:00:00] 2024-04-25 21:59:39,769 | INFO     | current chi2=0.06267796881175537 (change=95.54337659741925 %)
[2024-04-26 00:00:00] 2024-04-25 21:59:39,771 | INFO     | current chi2=0.0033930013330960647 (change=94.58661249332046 %)
[2024-04-26 00:00:00] 2024-04-25 21:59:39,773 | INFO     | current chi2=0.0009485290634078216 (change=72.04454197657793 %)
[2024-04-26 00:00:00] 2024-04-25 21:59:39,775 | INFO     | current chi2=0.0005843012909160254 (change=38.39922112488775 %)
[2024-04-26 00:00:00] 2024-04-25 21:59:39,776 | INFO     | current chi2=0.00032237584161050103 (change=44.82712144874719 %)
[2024-04-26 00:00:00] 2024-04-25 21:59:39,778 | INFO     | current chi2=0.00011396349779430349 (change=64.64887157022275 %)
[2024-04-26 00:00:00] 2024-04-25 21:59:39,780 | INFO     | current chi2=9.827241357443424e-05 (change=13.768517572346372 %)
[2024-04-26 00:00:00] 2024-04-25 21:59:39,780 | INFO     | left removable region: 80
[2024-04-26 00:00:00] 2024-04-25 21:59:39,781 | INFO     | current memory leak: 0.88 B/s (using 159 data points, chi2=0.00)
[2024-04-26 00:00:00] 2024-04-25 21:59:39,782 | INFO     | ..............................
[2024-04-26 00:00:00] 2024-04-25 21:59:39,782 | INFO     | . Timing measurements:
[2024-04-26 00:00:00] 2024-04-25 21:59:39,783 | INFO     | . get job = 0 s
[2024-04-26 00:00:00] 2024-04-25 21:59:39,783 | INFO     | . initial setup = 1 s
[2024-04-26 00:00:00] 2024-04-25 21:59:39,783 | INFO     | . payload setup = 4 s
[2024-04-26 00:00:00] 2024-04-25 21:59:39,783 | INFO     | . stage-in = 0 s
[2024-04-26 00:00:00] 2024-04-25 21:59:39,783 | INFO     | . payload execution = 14934 s
[2024-04-26 00:00:00] 2024-04-25 21:59:39,783 | INFO     | . stage-out = 0 s
[2024-04-26 00:00:00] 2024-04-25 21:59:39,783 | INFO     | . log creation = 0 s
[2024-04-26 00:00:00] 2024-04-25 21:59:39,783 | INFO     | ..............................
[2024-04-26 00:00:00] 2024-04-25 21:59:39,842 | INFO     | 
[2024-04-26 00:00:00] 2024-04-25 21:59:39,842 | INFO     | job summary report
[2024-04-26 00:00:00] 2024-04-25 21:59:39,842 | INFO     | --------------------------------------------------
[2024-04-26 00:00:00] 2024-04-25 21:59:39,842 | INFO     | PanDA job id: 6181371825
[2024-04-26 00:00:00] 2024-04-25 21:59:39,842 | INFO     | task id: 38204279
[2024-04-26 00:00:00] 2024-04-25 21:59:39,842 | INFO     | errors: (none)
[2024-04-26 00:00:00] 2024-04-25 21:59:39,842 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-26 00:00:00] 2024-04-25 21:59:39,842 | INFO     | pilot state: finished 
[2024-04-26 00:00:00] 2024-04-25 21:59:39,842 | INFO     | transexitcode: 0
[2024-04-26 00:00:00] 2024-04-25 21:59:39,842 | INFO     | exeerrorcode: 0
[2024-04-26 00:00:00] 2024-04-25 21:59:39,842 | INFO     | exeerrordiag: 
[2024-04-26 00:00:00] 2024-04-25 21:59:39,842 | INFO     | exitcode: 0
[2024-04-26 00:00:00] 2024-04-25 21:59:39,843 | INFO     | exitmsg: OK
[2024-04-26 00:00:00] 2024-04-25 21:59:39,843 | INFO     | cpuconsumptiontime: 56760 s
[2024-04-26 00:00:00] 2024-04-25 21:59:39,843 | INFO     | nevents: 400
[2024-04-26 00:00:00] 2024-04-25 21:59:39,843 | INFO     | neventsw: 0
[2024-04-26 00:00:00] 2024-04-25 21:59:39,843 | INFO     | pid: 2642824
[2024-04-26 00:00:00] 2024-04-25 21:59:39,843 | INFO     | pgrp: 2642824
[2024-04-26 00:00:00] 2024-04-25 21:59:39,843 | INFO     | corecount: 4
[2024-04-26 00:00:00] 2024-04-25 21:59:39,843 | INFO     | event service: False
[2024-04-26 00:00:00] 2024-04-25 21:59:39,843 | INFO     | sizes: {0: 2375641, 3: 2375847, 11: 2375875, 14942: 2406803, 14943: 2415841, 14950: 2415955}
[2024-04-26 00:00:00] 2024-04-25 21:59:39,843 | INFO     | --------------------------------------------------
[2024-04-26 00:00:00] 2024-04-25 21:59:39,843 | INFO     | 
[2024-04-26 00:00:00] 2024-04-25 21:59:39,843 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2024-04-26 00:00:00] 2024-04-25 21:59:39,856 | WARNING  | process 2642824 is no longer using CPU - aborting
[2024-04-26 00:00:00] 2024-04-25 21:59:39,856 | INFO     | aborting job monitoring since job object (job id=6181371825) has expired
[2024-04-26 00:00:00] 2024-04-25 21:59:39,869 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-26 00:00:00] 2024-04-25 21:59:39,870 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-26 00:00:00] 2024-04-25 21:59:39,870 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-26 00:00:00] 2024-04-25 21:59:39,870 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-26 00:00:00] 2024-04-25 21:59:39,870 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-26 00:00:00] 2024-04-25 21:59:39,870 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-26 00:00:00] 2024-04-25 21:59:39,870 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-26 00:00:00] 2024-04-25 21:59:39,870 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-26 00:00:00] 2024-04-25 21:59:39,870 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-26 00:00:00] 2024-04-25 21:59:39,870 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-26 00:00:00] 2024-04-25 21:59:39,870 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-26 00:00:00] 2024-04-25 21:59:39,871 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-26 00:00:00] 2024-04-25 21:59:39,871 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-26 00:00:00] 2024-04-25 21:59:39,871 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-26 00:00:00] 2024-04-25 21:59:39,871 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-26 00:00:00] 2024-04-25 21:59:39,871 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-26 00:00:00] 2024-04-25 21:59:39,871 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-26 00:00:00] 2024-04-25 21:59:39,871 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-26 00:00:00] 2024-04-25 21:59:39,871 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-26 00:00:00] 2024-04-25 21:59:39,871 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-26 00:00:00] 2024-04-25 21:59:39,871 | INFO     | job 6181371825 has completed (purged errors)
[2024-04-26 00:00:00] 2024-04-25 21:59:39,871 | INFO     | overall cleanup function is called
[2024-04-26 00:00:00] 2024-04-25 21:59:40,878 | INFO     | --- collectZombieJob: --- 10, [2642824]
[2024-04-26 00:00:00] 2024-04-25 21:59:40,878 | INFO     | zombie collector waiting for pid 2642824
[2024-04-26 00:00:00] 2024-04-25 21:59:40,879 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-26 00:00:00] 2024-04-25 21:59:41,881 | INFO     | collected zombie processes
[2024-04-26 00:00:00] 2024-04-25 21:59:41,881 | INFO     | will now attempt to kill all subprocesses of pid=2642824
[2024-04-26 00:00:00] 2024-04-25 21:59:41,978 | INFO     | process IDs to be killed: [2642824] (in reverse order)
[2024-04-26 00:00:00] 2024-04-25 21:59:42,049 | WARNING  | found no corresponding commands to process id(s)
[2024-04-26 00:00:00] 2024-04-25 21:59:42,050 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-26 00:00:00] 2024-04-25 21:59:42,054 | INFO     | did not find any defunct processes belonging to 2642824
[2024-04-26 00:00:00] 2024-04-25 21:59:42,057 | INFO     | did not find any defunct processes belonging to 2642824
[2024-04-26 00:00:00] 2024-04-25 21:59:42,057 | INFO     | ready for new job
[2024-04-26 00:00:00] 2024-04-25 21:59:42,057 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-26 00:00:00] 2024-04-25 21:59:42,058 | INFO     | *************************************
[2024-04-26 00:00:00] 2024-04-25 21:59:42,058 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-26 00:00:00] 2024-04-25 21:59:42,058 | INFO     | *************************************
[2024-04-26 00:00:00] 2024-04-25 21:59:42,058 | INFO     | 
[2024-04-26 00:00:00] 2024-04-25 21:59:42,060 | INFO     | architecture information:
[2024-04-26 00:00:00] 2024-04-25 21:59:42,060 | INFO     | executing command: cat /etc/os-release
[2024-04-26 00:00:00] 2024-04-25 21:59:42,070 | INFO     | cat /etc/os-release:
[2024-04-26 00:00:00] NAME="CentOS Linux"
[2024-04-26 00:00:00] VERSION="7 (Core)"
[2024-04-26 00:00:00] ID="centos"
[2024-04-26 00:00:00] ID_LIKE="rhel fedora"
[2024-04-26 00:00:00] VERSION_ID="7"
[2024-04-26 00:00:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-26 00:00:00] ANSI_COLOR="0;31"
[2024-04-26 00:00:00] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-26 00:00:00] HOME_URL="https://www.centos.org/"
[2024-04-26 00:00:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-26 00:00:00] 
[2024-04-26 00:00:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-26 00:00:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-26 00:00:00] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-26 00:00:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-26 00:00:00] 
[2024-04-26 00:00:00] 2024-04-25 21:59:42,070 | INFO     | *************************************
[2024-04-26 00:00:00] 2024-04-25 21:59:42,572 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2024-04-26 00:00:00] 2024-04-25 21:59:42,588 | INFO     | sufficient remaining disk space (1641873932288 B)
[2024-04-26 00:00:00] 2024-04-25 21:59:42,588 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-26 00:00:00] 2024-04-25 21:59:42,588 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-26 00:00:00] 2024-04-25 21:59:43,000 | INFO     | found 0 job(s) in 20 queues
[2024-04-26 00:00:00] 2024-04-25 21:59:43,001 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-26 00:00:00] 2024-04-25 21:59:43,001 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-26 00:00:00] 2024-04-25 21:59:43,066 | INFO     | all data control threads have been joined
[2024-04-26 00:00:00] 2024-04-25 21:59:43,267 | INFO     | all payload control threads have been joined
[2024-04-26 00:00:00] 2024-04-25 21:59:43,364 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-26 00:00:00] 2024-04-25 21:59:43,364 | INFO     | aborting loop
[2024-04-26 00:00:00] 2024-04-25 21:59:43,388 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-26 00:00:00] 2024-04-25 21:59:43,391 | INFO     | all job control threads have been joined
[2024-04-26 00:00:00] 2024-04-25 21:59:43,439 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-26 00:00:00] 2024-04-25 21:59:43,593 | INFO     | [job] retrieve thread has finished
[2024-04-26 00:00:00] 2024-04-25 21:59:44,071 | INFO     | [data] control thread has finished
[2024-04-26 00:00:00] 2024-04-25 21:59:44,164 | INFO     | [data] copytool_in thread has finished
[2024-04-26 00:00:00] 2024-04-25 21:59:44,194 | INFO     | [payload] validate_pre thread has finished
[2024-04-26 00:00:00] 2024-04-25 21:59:44,272 | INFO     | [payload] control thread has finished
[2024-04-26 00:00:00] 2024-04-25 21:59:44,304 | INFO     | [payload] validate_post thread has finished
[2024-04-26 00:00:00] 2024-04-25 21:59:44,369 | INFO     | [job] job monitor thread has finished
[2024-04-26 00:00:00] 2024-04-25 21:59:44,396 | INFO     | [job] control thread has finished
[2024-04-26 00:00:00] 2024-04-25 21:59:44,485 | INFO     | [job] validate thread has finished
[2024-04-26 00:00:00] 2024-04-25 21:59:44,519 | INFO     | [payload] execute_payloads thread has finished
[2024-04-26 00:00:00] 2024-04-25 21:59:44,852 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-26 00:00:00] 2024-04-25 21:59:45,002 | INFO     | [job] create_data_payload thread has finished
[2024-04-26 00:00:00] 2024-04-25 21:59:45,133 | INFO     | [payload] failed_post thread has finished
[2024-04-26 00:00:00] 2024-04-25 21:59:45,393 | INFO     | [data] copytool_out thread has finished
[2024-04-26 00:00:00] 2024-04-25 21:59:45,856 | INFO     | [job] queue monitor thread has finished
[2024-04-26 00:00:00] 2024-04-25 21:59:47,444 | INFO     | [data] queue_monitor thread has finished
[2024-04-26 00:00:00] 2024-04-25 21:59:53,038 | INFO     | job.realtimelogging is not enabled
[2024-04-26 00:00:00] 2024-04-25 21:59:54,041 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-26 00:00:00] 2024-04-25 21:59:54,857 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 46952387163200)>', '<ExcThread(monitor, started 46952558397184)>']
[2024-04-26 00:00:00] 2024-04-25 21:59:55,055 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-26 00:00:00] 2024-04-25 21:59:55,055 | INFO     | [monitor] control thread has ended
[2024-04-26 00:00:00] 2024-04-25 21:59:59,882 | INFO     | all workflow threads have been joined
[2024-04-26 00:00:00] 2024-04-25 21:59:59,882 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-26 00:00:00] 2024-04-25 21:59:59,883 | INFO     | traces error code: 0
[2024-04-26 00:00:00] 2024-04-25 21:59:59,883 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-26 00:00:00] 2024-04-25 21:59:59,944 [wrapper] ==== pilot stdout END ====
[2024-04-26 00:00:00] 2024-04-25 21:59:59,946 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-26 00:00:00] 2024-04-25 21:59:59,948 [wrapper] pilotpid: 2635721
[2024-04-26 00:00:00] 2024-04-25 21:59:59,950 [wrapper] Pilot exit status: 0
[2024-04-26 00:00:00] 2024-04-25 21:59:59,957 [wrapper] pandaids: 6181371825
[2024-04-26 00:00:00] 2024-04-25 22:00:00,000 [wrapper] cleanup: SIGTERM to supervisor_pilot 3062244 2635722
[2024-04-26 00:00:00] 2024-04-25 22:00:00,002 [wrapper] Test setup, not cleaning
[2024-04-26 00:00:00] 2024-04-25 22:00:00,005 [wrapper] ==== wrapper stdout END ====
[2024-04-26 00:00:00] 2024-04-25 22:00:00,007 [wrapper] ==== wrapper stderr END ====
[2024-04-26 00:00:00] 2024-04-25 22:00:00,012 [wrapper] apfmon messages muted
[2024-04-26 00:00:00]  *** Error codes and diagnostics ***
[2024-04-26 00:00:00]     "exeErrorCode": 0,
[2024-04-26 00:00:00]     "exeErrorDiag": "",
[2024-04-26 00:00:00]     "pilotErrorCode": 0,
[2024-04-26 00:00:00]     "pilotErrorDiag": "",
[2024-04-26 00:00:00]  *** Listing of results directory ***
[2024-04-26 00:00:00] total 618404
[2024-04-26 00:00:00] -rw-r--r-- 1 boinc boinc    462745 Apr 20 20:09 pilot3.tar.gz
[2024-04-26 00:00:00] -rw-r--r-- 1 boinc boinc      6720 Apr 20 20:11 queuedata.json
[2024-04-26 00:00:00] -rwx------ 1 boinc boinc     32211 Apr 20 20:12 runpilot2-wrapper.sh
[2024-04-26 00:00:00] -rw-r--r-- 1 boinc boinc       100 Apr 25 19:49 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-26 00:00:00] -rwxr-xr-x 1 boinc boinc      7986 Apr 25 19:49 run_atlas
[2024-04-26 00:00:00] -rw-r--r-- 1 boinc boinc       105 Apr 25 19:49 job.xml
[2024-04-26 00:00:00] -rw-r--r-- 1 boinc boinc      6457 Apr 25 19:50 init_data.xml
[2024-04-26 00:00:00] -rw-r--r-- 2 boinc boinc 454464725 Apr 25 19:50 EVNT.38204277._000660.pool.root.1
[2024-04-26 00:00:00] drwxrwx--x 2 boinc boinc      4096 Apr 25 19:50 shared
[2024-04-26 00:00:00] -rw-r--r-- 2 boinc boinc    474801 Apr 25 19:50 input.tar.gz
[2024-04-26 00:00:00] -rw-r--r-- 2 boinc boinc     17537 Apr 25 19:50 start_atlas.sh
[2024-04-26 00:00:00] -rw-r--r-- 1 boinc boinc         0 Apr 25 19:50 boinc_lockfile
[2024-04-26 00:00:00] -rw-r--r-- 1 boinc boinc      2584 Apr 25 19:50 pandaJob.out
[2024-04-26 00:00:00] -rw------- 1 boinc boinc       424 Apr 25 19:50 setup.sh.local
[2024-04-26 00:00:00] -rw------- 1 boinc boinc    993235 Apr 25 19:50 agis_schedconf.cvmfs.json
[2024-04-26 00:00:00] -rw------- 1 boinc boinc   1315307 Apr 25 19:50 cric_ddmendpoints.json
[2024-04-26 00:00:00] drwx------ 4 boinc boinc      4096 Apr 25 19:50 pilot3
[2024-04-26 00:00:00] -rw-r--r-- 1 boinc boinc       531 Apr 25 23:59 boinc_task_state.xml
[2024-04-26 00:00:00] -rw------- 1 boinc boinc        95 Apr 25 23:59 pilot_heartbeat.json
[2024-04-26 00:00:00] -rw------- 1 boinc boinc 171810693 Apr 25 23:59 HITS.38204279._017027.pool.root.1
[2024-04-26 00:00:00] -rw------- 1 boinc boinc      1051 Apr 25 23:59 memory_monitor_summary.json
[2024-04-26 00:00:00] -rw------- 1 boinc boinc         0 Apr 25 23:59 agis_ddmendpoints.agis.ALL.json
[2024-04-26 00:00:00] -rw------- 1 boinc boinc    331911 Apr 25 23:59 log.38204279._017027.job.log.tgz.1
[2024-04-26 00:00:00] -rw-r--r-- 1 boinc boinc      8192 Apr 25 23:59 boinc_mmap_file
[2024-04-26 00:00:00] -rw-r--r-- 1 boinc boinc        28 Apr 25 23:59 wrapper_checkpoint.txt
[2024-04-26 00:00:00] -rw------- 1 boinc boinc      7745 Apr 25 23:59 heartbeat.json
[2024-04-26 00:00:00] -rw------- 1 boinc boinc      4294 Apr 25 23:59 pilotlog.txt
[2024-04-26 00:00:00] -rw------- 1 boinc boinc   1412435 Apr 26 00:00 log.38204279._017027.job.log.1
[2024-04-26 00:00:00] -rw------- 1 boinc boinc       357 Apr 26 00:00 output.list
[2024-04-26 00:00:00] -rw-r--r-- 1 boinc boinc       620 Apr 26 00:00 runtime_log
[2024-04-26 00:00:00] -rw------- 1 boinc boinc   1761280 Apr 26 00:00 result.tar.gz
[2024-04-26 00:00:00] -rw------- 1 boinc boinc       658 Apr 26 00:00 vCLODmaNUI5nsSi4apGgGQJmABFKDmABFKDmRLXKDmBKLKDmug6zVn.diag
[2024-04-26 00:00:00] -rw-r--r-- 1 boinc boinc     11410 Apr 26 00:00 runtime_log.err
[2024-04-26 00:00:00] -rw-r--r-- 1 boinc boinc     21248 Apr 26 00:00 stderr.txt
[2024-04-26 00:00:00] HITS file was successfully produced:
[2024-04-26 00:00:00] -rw------- 1 boinc boinc 171810693 Apr 25 23:59 shared/HITS.pool.root.1
[2024-04-26 00:00:00]  *** Contents of shared directory: ***
[2024-04-26 00:00:00] total 613812
[2024-04-26 00:00:00] -rw-r--r-- 2 boinc boinc 454464725 Apr 25 19:50 ATLAS.root_0
[2024-04-26 00:00:00] -rw-r--r-- 2 boinc boinc    474801 Apr 25 19:50 input.tar.gz
[2024-04-26 00:00:00] -rw-r--r-- 2 boinc boinc     17537 Apr 25 19:50 start_atlas.sh
[2024-04-26 00:00:00] -rw------- 1 boinc boinc 171810693 Apr 25 23:59 HITS.pool.root.1
[2024-04-26 00:00:00] -rw------- 1 boinc boinc   1761280 Apr 26 00:00 result.tar.gz
00:00:02 (2631511): run_atlas exited; CPU time 56524.805052
00:00:02 (2631511): called boinc_finish(0)

</stderr_txt>
]]>

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