Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:19:47 (572402): wrapper (7.7.26015): starting
17:19:47 (572402): wrapper: running run_atlas (--nthreads 4)
[2024-04-25 17:19:47] Arguments: --nthreads 4
[2024-04-25 17:19:47] Threads: 4
[2024-04-25 17:19:47] Checking for CVMFS
[2024-04-25 17:19:47] No cvmfs_config command found, will try listing directly
[2024-04-25 17:19:47] CVMFS is ok
[2024-04-25 17:19:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-25 17:19:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-25 17:19:47] Further information can be found at the LHC@home message board.
[2024-04-25 17:19:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-25 17:19:47] Checking for apptainer binary...
[2024-04-25 17:19:47] which: no apptainer in ((null))
[2024-04-25 17:19:47] apptainer is not installed, using version from CVMFS
[2024-04-25 17:19:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-25 17:19:48] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2024-04-25 17:19:48] apptainer works
[2024-04-25 17:19:48] Set ATHENA_PROC_NUMBER=4
[2024-04-25 17:19:48] Set ATHENA_CORE_NUMBER=4
[2024-04-25 17:19:48] Starting ATLAS job with PandaID=6181231024
[2024-04-25 17:19:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-25 20:37:52]  *** The last 200 lines of the pilot log: ***
[2024-04-25 20:37:52]  ddm_activity=['write_lan', 'write_wan']
[2024-04-25 20:37:52]  ddmendpoint=NDGF-T1_DATADISK
[2024-04-25 20:37:52]  direct_access_lan=False
[2024-04-25 20:37:52]  direct_access_wan=False
[2024-04-25 20:37:52]  domain=
[2024-04-25 20:37:52]  filesize=308530
[2024-04-25 20:37:52]  filetype=log
[2024-04-25 20:37:52]  guid=c33efb56-0dc1-48cb-9d28-2c79da2a14cc
[2024-04-25 20:37:52]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-25 20:37:52]  is_tar=False
[2024-04-25 20:37:52]  lfn=log.38204279._016634.job.log.tgz.1
[2024-04-25 20:37:52]  mtime=0
[2024-04-25 20:37:52]  protocol_id=None
[2024-04-25 20:37:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-25 20:37:52]  replicas=None
[2024-04-25 20:37:52]  scope=mc23_13p6TeV
[2024-04-25 20:37:52]  status=None
[2024-04-25 20:37:52]  status_code=0
[2024-04-25 20:37:52]  storage_token=
[2024-04-25 20:37:52]  surl=/scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6181231024/log.38204279._016634.job.log.tgz.1
[2024-04-25 20:37:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1e/9b/log.38204279._016634.job.log.tgz.1
[2024-04-25 20:37:52]  workdir=None
[2024-04-25 20:37:52] ]
[2024-04-25 20:37:52] 2024-04-25 18:37:27,526 | INFO     | transferring file log.38204279._016634.job.log.tgz.1 from /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6181231024/log.38204279._016634.job.log.tgz.1 to /scratch/b
[2024-04-25 20:37:52] 2024-04-25 18:37:27,526 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6181231024/log.38204279._016634.job.log.tgz.1 /scratch/boinc/var/slot48/slots/0/lo
[2024-04-25 20:37:52] 2024-04-25 18:37:27,544 | INFO     | adding to output.list: log.38204279._016634.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1e/9b/log.38204279._016634.job.log.tg
[2024-04-25 20:37:52] 2024-04-25 18:37:27,545 | INFO     | summary of transferred files:
[2024-04-25 20:37:52] 2024-04-25 18:37:27,545 | INFO     |  -- lfn=log.38204279._016634.job.log.tgz.1, status_code=0, status=transferred
[2024-04-25 20:37:52] 2024-04-25 18:37:27,545 | INFO     | stage-out finished correctly
[2024-04-25 20:37:52] 2024-04-25 18:37:28,147 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-25 20:37:52] 2024-04-25 18:37:28,200 | INFO     | job 6181231024 has state=finished
[2024-04-25 20:37:52] 2024-04-25 18:37:28,200 | INFO     | preparing for final server update for job 6181231024 in state='finished'
[2024-04-25 20:37:52] 2024-04-25 18:37:28,200 | INFO     | this job has now completed (state=finished)
[2024-04-25 20:37:52] 2024-04-25 18:37:28,200 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-25 20:37:52] 2024-04-25 18:37:28,200 | INFO     | job 6181231024 has finished - writing final server update
[2024-04-25 20:37:52] 2024-04-25 18:37:28,201 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_790524/.job.ad'
[2024-04-25 20:37:52] 2024-04-25 18:37:28,201 | INFO     | total number of processed events: 400 (read)
[2024-04-25 20:37:52] 2024-04-25 18:37:28,204 | INFO     | executing command: lscpu
[2024-04-25 20:37:52] 2024-04-25 18:37:28,250 | INFO     | found 32 cores (16 cores per socket, 2 sockets)
[2024-04-25 20:37:52] 2024-04-25 18:37:28,250 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-25 20:37:52] 2024-04-25 18:37:28,279 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-25 20:37:52] 2024-04-25 18:37:31,461 | INFO     | CPU arch script returned: x86-64-v4
[2024-04-25 20:37:52] 2024-04-25 18:37:31,461 | INFO     | using path: /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6181231024/memory_monitor_summary.json (trf name=prmon)
[2024-04-25 20:37:52] 2024-04-25 18:37:31,466 | INFO     | extracted standard info from prmon json
[2024-04-25 20:37:52] 2024-04-25 18:37:31,467 | INFO     | extracted standard memory fields from prmon json
[2024-04-25 20:37:52] 2024-04-25 18:37:31,467 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-25 20:37:52] 2024-04-25 18:37:31,467 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-25 20:37:52] 2024-04-25 18:37:31,470 | INFO     | fitting pss+swap vs Time
[2024-04-25 20:37:52] 2024-04-25 18:37:31,472 | INFO     | current chi2=3.9083170818660475 (change=-0.1283418048521405 %)
[2024-04-25 20:37:52] 2024-04-25 18:37:31,472 | INFO     | right removable region: 188
[2024-04-25 20:37:52] 2024-04-25 18:37:31,473 | INFO     | current chi2=1.5252988179658016 (change=60.92291433864495 %)
[2024-04-25 20:37:52] 2024-04-25 18:37:31,474 | INFO     | current chi2=0.1897984766494962 (change=87.55663648237669 %)
[2024-04-25 20:37:52] 2024-04-25 18:37:31,475 | INFO     | current chi2=0.12407251277434884 (change=34.62934215037169 %)
[2024-04-25 20:37:52] 2024-04-25 18:37:31,475 | INFO     | current chi2=0.1238341703359879 (change=0.1920993079219904 %)
[2024-04-25 20:37:52] 2024-04-25 18:37:31,475 | INFO     | left removable region: 40
[2024-04-25 20:37:52] 2024-04-25 18:37:31,476 | INFO     | current memory leak: -18.27 B/s (using 148 data points, chi2=0.10)
[2024-04-25 20:37:52] 2024-04-25 18:37:31,476 | INFO     | ..............................
[2024-04-25 20:37:52] 2024-04-25 18:37:31,477 | INFO     | . Timing measurements:
[2024-04-25 20:37:52] 2024-04-25 18:37:31,477 | INFO     | . get job = 0 s
[2024-04-25 20:37:52] 2024-04-25 18:37:31,477 | INFO     | . initial setup = 1 s
[2024-04-25 20:37:52] 2024-04-25 18:37:31,477 | INFO     | . payload setup = 4 s
[2024-04-25 20:37:52] 2024-04-25 18:37:31,477 | INFO     | . stage-in = 0 s
[2024-04-25 20:37:52] 2024-04-25 18:37:31,477 | INFO     | . payload execution = 11828 s
[2024-04-25 20:37:52] 2024-04-25 18:37:31,477 | INFO     | . stage-out = 0 s
[2024-04-25 20:37:52] 2024-04-25 18:37:31,477 | INFO     | . log creation = 0 s
[2024-04-25 20:37:52] 2024-04-25 18:37:31,477 | INFO     | ..............................
[2024-04-25 20:37:52] 2024-04-25 18:37:31,532 | INFO     | 
[2024-04-25 20:37:52] 2024-04-25 18:37:31,533 | INFO     | job summary report
[2024-04-25 20:37:52] 2024-04-25 18:37:31,533 | INFO     | --------------------------------------------------
[2024-04-25 20:37:52] 2024-04-25 18:37:31,533 | INFO     | PanDA job id: 6181231024
[2024-04-25 20:37:52] 2024-04-25 18:37:31,533 | INFO     | task id: 38204279
[2024-04-25 20:37:52] 2024-04-25 18:37:31,533 | INFO     | errors: (none)
[2024-04-25 20:37:52] 2024-04-25 18:37:31,533 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-25 20:37:52] 2024-04-25 18:37:31,533 | INFO     | pilot state: finished 
[2024-04-25 20:37:52] 2024-04-25 18:37:31,533 | INFO     | transexitcode: 0
[2024-04-25 20:37:52] 2024-04-25 18:37:31,534 | INFO     | exeerrorcode: 0
[2024-04-25 20:37:52] 2024-04-25 18:37:31,534 | INFO     | exeerrordiag: 
[2024-04-25 20:37:52] 2024-04-25 18:37:31,534 | INFO     | exitcode: 0
[2024-04-25 20:37:52] 2024-04-25 18:37:31,534 | INFO     | exitmsg: OK
[2024-04-25 20:37:52] 2024-04-25 18:37:31,534 | INFO     | cpuconsumptiontime: 44596 s
[2024-04-25 20:37:52] 2024-04-25 18:37:31,534 | INFO     | nevents: 400
[2024-04-25 20:37:52] 2024-04-25 18:37:31,534 | INFO     | neventsw: 0
[2024-04-25 20:37:52] 2024-04-25 18:37:31,534 | INFO     | pid: 584050
[2024-04-25 20:37:52] 2024-04-25 18:37:31,534 | INFO     | pgrp: 584050
[2024-04-25 20:37:52] 2024-04-25 18:37:31,534 | INFO     | corecount: 4
[2024-04-25 20:37:52] 2024-04-25 18:37:31,534 | INFO     | event service: False
[2024-04-25 20:37:52] 2024-04-25 18:37:31,534 | INFO     | sizes: {0: 2375681, 3: 2375887, 11: 2375915, 11836: 2405543, 11837: 2414581, 11840: 2414695}
[2024-04-25 20:37:52] 2024-04-25 18:37:31,534 | INFO     | --------------------------------------------------
[2024-04-25 20:37:52] 2024-04-25 18:37:31,535 | INFO     | 
[2024-04-25 20:37:52] 2024-04-25 18:37:31,535 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2024-04-25 20:37:52] 2024-04-25 18:37:31,609 | WARNING  | process 584050 is no longer using CPU - aborting
[2024-04-25 20:37:52] 2024-04-25 18:37:31,609 | INFO     | aborting job monitoring since job object (job id=6181231024) has expired
[2024-04-25 20:37:52] 2024-04-25 18:37:31,627 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-25 20:37:52] 2024-04-25 18:37:31,628 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-25 20:37:52] 2024-04-25 18:37:31,628 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-25 20:37:52] 2024-04-25 18:37:31,628 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-25 20:37:52] 2024-04-25 18:37:31,628 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-25 20:37:52] 2024-04-25 18:37:31,628 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-25 20:37:52] 2024-04-25 18:37:31,628 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-25 20:37:52] 2024-04-25 18:37:31,628 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-25 20:37:52] 2024-04-25 18:37:31,628 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-25 20:37:52] 2024-04-25 18:37:31,628 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-25 20:37:52] 2024-04-25 18:37:31,628 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-25 20:37:52] 2024-04-25 18:37:31,628 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-25 20:37:52] 2024-04-25 18:37:31,628 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-25 20:37:52] 2024-04-25 18:37:31,628 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-25 20:37:52] 2024-04-25 18:37:31,628 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-25 20:37:52] 2024-04-25 18:37:31,628 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-25 20:37:52] 2024-04-25 18:37:31,628 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-25 20:37:52] 2024-04-25 18:37:31,629 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-25 20:37:52] 2024-04-25 18:37:31,629 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-25 20:37:52] 2024-04-25 18:37:31,629 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-25 20:37:52] 2024-04-25 18:37:31,629 | INFO     | job 6181231024 has completed (purged errors)
[2024-04-25 20:37:52] 2024-04-25 18:37:31,629 | INFO     | overall cleanup function is called
[2024-04-25 20:37:52] 2024-04-25 18:37:32,635 | INFO     | --- collectZombieJob: --- 10, [584050]
[2024-04-25 20:37:52] 2024-04-25 18:37:32,636 | INFO     | zombie collector waiting for pid 584050
[2024-04-25 20:37:52] 2024-04-25 18:37:32,636 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-25 20:37:52] 2024-04-25 18:37:33,640 | INFO     | collected zombie processes
[2024-04-25 20:37:52] 2024-04-25 18:37:33,641 | INFO     | will now attempt to kill all subprocesses of pid=584050
[2024-04-25 20:37:52] 2024-04-25 18:37:33,789 | INFO     | process IDs to be killed: [584050] (in reverse order)
[2024-04-25 20:37:52] 2024-04-25 18:37:33,882 | WARNING  | found no corresponding commands to process id(s)
[2024-04-25 20:37:52] 2024-04-25 18:37:33,882 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-25 20:37:52] 2024-04-25 18:37:33,889 | INFO     | did not find any defunct processes belonging to 584050
[2024-04-25 20:37:52] 2024-04-25 18:37:33,894 | INFO     | did not find any defunct processes belonging to 584050
[2024-04-25 20:37:52] 2024-04-25 18:37:33,894 | INFO     | ready for new job
[2024-04-25 20:37:52] 2024-04-25 18:37:33,894 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-25 20:37:52] 2024-04-25 18:37:33,895 | INFO     | *************************************
[2024-04-25 20:37:52] 2024-04-25 18:37:33,895 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-25 20:37:52] 2024-04-25 18:37:33,896 | INFO     | *************************************
[2024-04-25 20:37:52] 2024-04-25 18:37:33,896 | INFO     | 
[2024-04-25 20:37:52] 2024-04-25 18:37:33,898 | INFO     | architecture information:
[2024-04-25 20:37:52] 2024-04-25 18:37:33,899 | INFO     | executing command: cat /etc/os-release
[2024-04-25 20:37:52] 2024-04-25 18:37:33,910 | INFO     | cat /etc/os-release:
[2024-04-25 20:37:52] NAME="CentOS Linux"
[2024-04-25 20:37:52] VERSION="7 (Core)"
[2024-04-25 20:37:52] ID="centos"
[2024-04-25 20:37:52] ID_LIKE="rhel fedora"
[2024-04-25 20:37:52] VERSION_ID="7"
[2024-04-25 20:37:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-25 20:37:52] ANSI_COLOR="0;31"
[2024-04-25 20:37:52] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-25 20:37:52] HOME_URL="https://www.centos.org/"
[2024-04-25 20:37:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-25 20:37:52] 
[2024-04-25 20:37:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-25 20:37:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-25 20:37:52] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-25 20:37:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-25 20:37:52] 
[2024-04-25 20:37:52] 2024-04-25 18:37:33,910 | INFO     | *************************************
[2024-04-25 20:37:52] 2024-04-25 18:37:34,413 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2024-04-25 20:37:52] 2024-04-25 18:37:34,433 | INFO     | sufficient remaining disk space (635644674048 B)
[2024-04-25 20:37:52] 2024-04-25 18:37:34,434 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-25 20:37:52] 2024-04-25 18:37:34,434 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-25 20:37:52] 2024-04-25 18:37:34,434 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-25 20:37:52] 2024-04-25 18:37:34,434 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-25 20:37:52] 2024-04-25 18:37:34,435 | INFO     | found 0 job(s) in 20 queues
[2024-04-25 20:37:52] 2024-04-25 18:37:34,435 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-25 20:37:52] 2024-04-25 18:37:34,435 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-25 20:37:52] 2024-04-25 18:37:34,880 | INFO     | all data control threads have been joined
[2024-04-25 20:37:52] 2024-04-25 18:37:34,885 | INFO     | all job control threads have been joined
[2024-04-25 20:37:52] 2024-04-25 18:37:35,120 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-25 20:37:52] 2024-04-25 18:37:35,121 | INFO     | aborting loop
[2024-04-25 20:37:52] 2024-04-25 18:37:35,345 | INFO     | all payload control threads have been joined
[2024-04-25 20:37:52] 2024-04-25 18:37:35,439 | INFO     | [job] retrieve thread has finished
[2024-04-25 20:37:52] 2024-04-25 18:37:35,616 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-25 20:37:52] 2024-04-25 18:37:35,708 | INFO     | [data] copytool_in thread has finished
[2024-04-25 20:37:52] 2024-04-25 18:37:35,834 | INFO     | [payload] failed_post thread has finished
[2024-04-25 20:37:52] 2024-04-25 18:37:35,844 | INFO     | [payload] validate_post thread has finished
[2024-04-25 20:37:52] 2024-04-25 18:37:35,884 | INFO     | [data] control thread has finished
[2024-04-25 20:37:52] 2024-04-25 18:37:35,889 | INFO     | [job] control thread has finished
[2024-04-25 20:37:52] 2024-04-25 18:37:36,126 | INFO     | [job] job monitor thread has finished
[2024-04-25 20:37:52] 2024-04-25 18:37:36,296 | INFO     | [job] create_data_payload thread has finished
[2024-04-25 20:37:52] 2024-04-25 18:37:36,350 | INFO     | [payload] control thread has finished
[2024-04-25 20:37:52] 2024-04-25 18:37:36,406 | INFO     | [job] validate thread has finished
[2024-04-25 20:37:52] 2024-04-25 18:37:36,409 | INFO     | [payload] validate_pre thread has finished
[2024-04-25 20:37:52] 2024-04-25 18:37:36,543 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-25 20:37:52] 2024-04-25 18:37:36,616 | INFO     | [payload] execute_payloads thread has finished
[2024-04-25 20:37:52] 2024-04-25 18:37:37,547 | INFO     | [job] queue monitor thread has finished
[2024-04-25 20:37:52] 2024-04-25 18:37:37,621 | INFO     | [data] copytool_out thread has finished
[2024-04-25 20:37:52] 2024-04-25 18:37:38,439 | INFO     | [data] queue_monitor thread has finished
[2024-04-25 20:37:52] 2024-04-25 18:37:45,221 | INFO     | job.realtimelogging is not enabled
[2024-04-25 20:37:52] 2024-04-25 18:37:46,227 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-25 20:37:52] 2024-04-25 18:37:46,634 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47670686536768)>', '<ExcThread(monitor, started 47671062583040)>']
[2024-04-25 20:37:52] 2024-04-25 18:37:47,499 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-25 20:37:52] 2024-04-25 18:37:47,499 | INFO     | [monitor] control thread has ended
[2024-04-25 20:37:52] 2024-04-25 18:37:51,659 | INFO     | all workflow threads have been joined
[2024-04-25 20:37:52] 2024-04-25 18:37:51,660 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-25 20:37:52] 2024-04-25 18:37:51,660 | INFO     | traces error code: 0
[2024-04-25 20:37:52] 2024-04-25 18:37:51,660 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-25 20:37:52] 2024-04-25 18:37:51,726 [wrapper] ==== pilot stdout END ====
[2024-04-25 20:37:52] 2024-04-25 18:37:51,729 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-25 20:37:52] 2024-04-25 18:37:51,731 [wrapper] pilotpid: 576776
[2024-04-25 20:37:52] 2024-04-25 18:37:51,734 [wrapper] Pilot exit status: 0
[2024-04-25 20:37:52] 2024-04-25 18:37:51,741 [wrapper] pandaids: 6181231024
[2024-04-25 20:37:52] 2024-04-25 18:37:51,813 [wrapper] cleanup: SIGTERM to supervisor_pilot 1113615 576777
[2024-04-25 20:37:52] 2024-04-25 18:37:51,816 [wrapper] Test setup, not cleaning
[2024-04-25 20:37:52] 2024-04-25 18:37:51,818 [wrapper] ==== wrapper stdout END ====
[2024-04-25 20:37:52] 2024-04-25 18:37:51,820 [wrapper] ==== wrapper stderr END ====
[2024-04-25 20:37:52] 2024-04-25 18:37:51,823 [wrapper] apfmon messages muted
[2024-04-25 20:37:52]  *** Error codes and diagnostics ***
[2024-04-25 20:37:52]     "exeErrorCode": 0,
[2024-04-25 20:37:52]     "exeErrorDiag": "",
[2024-04-25 20:37:52]     "pilotErrorCode": 0,
[2024-04-25 20:37:52]     "pilotErrorDiag": "",
[2024-04-25 20:37:52]  *** Listing of results directory ***
[2024-04-25 20:37:52] total 621492
[2024-04-25 20:37:52] -rw-r--r-- 1 boinc boinc    462745 Apr 20 16:30 pilot3.tar.gz
[2024-04-25 20:37:52] -rw-r--r-- 1 boinc boinc      6720 Apr 20 16:54 queuedata.json
[2024-04-25 20:37:52] -rwx------ 1 boinc boinc     32211 Apr 20 16:57 runpilot2-wrapper.sh
[2024-04-25 20:37:52] -rw-r--r-- 1 boinc boinc       100 Apr 25 17:19 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-25 20:37:52] -rwxr-xr-x 1 boinc boinc      7986 Apr 25 17:19 run_atlas
[2024-04-25 20:37:52] -rw-r--r-- 1 boinc boinc       105 Apr 25 17:19 job.xml
[2024-04-25 20:37:52] -rw-r--r-- 1 boinc boinc      6662 Apr 25 17:19 init_data.xml
[2024-04-25 20:37:52] -rw-r--r-- 2 boinc boinc 453854401 Apr 25 17:19 EVNT.38204277._000027.pool.root.1
[2024-04-25 20:37:52] -rw-r--r-- 2 boinc boinc     17537 Apr 25 17:19 start_atlas.sh
[2024-04-25 20:37:52] drwxrwx--x 2 boinc boinc      4096 Apr 25 17:19 shared
[2024-04-25 20:37:52] -rw-r--r-- 2 boinc boinc    474805 Apr 25 17:19 input.tar.gz
[2024-04-25 20:37:52] -rw-r--r-- 1 boinc boinc         0 Apr 25 17:19 boinc_lockfile
[2024-04-25 20:37:52] -rw-r--r-- 1 boinc boinc      2579 Apr 25 17:19 pandaJob.out
[2024-04-25 20:37:52] -rw------- 1 boinc boinc       424 Apr 25 17:19 setup.sh.local
[2024-04-25 20:37:52] -rw------- 1 boinc boinc    989525 Apr 25 17:19 agis_schedconf.cvmfs.json
[2024-04-25 20:37:52] -rw------- 1 boinc boinc   1315307 Apr 25 17:19 cric_ddmendpoints.json
[2024-04-25 20:37:52] drwx------ 4 boinc boinc      4096 Apr 25 17:19 pilot3
[2024-04-25 20:37:52] -rw------- 1 boinc boinc 176198754 Apr 25 20:36 HITS.38204279._016634.pool.root.1
[2024-04-25 20:37:52] -rw-r--r-- 1 boinc boinc       531 Apr 25 20:37 boinc_task_state.xml
[2024-04-25 20:37:52] -rw------- 1 boinc boinc      1048 Apr 25 20:37 memory_monitor_summary.json
[2024-04-25 20:37:52] -rw------- 1 boinc boinc         0 Apr 25 20:37 agis_ddmendpoints.agis.ALL.json
[2024-04-25 20:37:52] -rw------- 1 boinc boinc    308530 Apr 25 20:37 log.38204279._016634.job.log.tgz.1
[2024-04-25 20:37:52] -rw------- 1 boinc boinc        95 Apr 25 20:37 pilot_heartbeat.json
[2024-04-25 20:37:52] -rw------- 1 boinc boinc      7740 Apr 25 20:37 heartbeat.json
[2024-04-25 20:37:52] -rw-r--r-- 1 boinc boinc        28 Apr 25 20:37 wrapper_checkpoint.txt
[2024-04-25 20:37:52] -rw-r--r-- 1 boinc boinc      8192 Apr 25 20:37 boinc_mmap_file
[2024-04-25 20:37:52] -rw------- 1 boinc boinc      4416 Apr 25 20:37 pilotlog.txt
[2024-04-25 20:37:52] -rw------- 1 boinc boinc   1126507 Apr 25 20:37 log.38204279._016634.job.log.1
[2024-04-25 20:37:52] -rw------- 1 boinc boinc       357 Apr 25 20:37 output.list
[2024-04-25 20:37:52] -rw-r--r-- 1 boinc boinc       620 Apr 25 20:37 runtime_log
[2024-04-25 20:37:52] -rw------- 1 boinc boinc   1454080 Apr 25 20:37 result.tar.gz
[2024-04-25 20:37:52] -rw-r--r-- 1 boinc boinc     11410 Apr 25 20:37 runtime_log.err
[2024-04-25 20:37:52] -rw------- 1 boinc boinc       657 Apr 25 20:37 XwnMDmlKRI5nsSi4apGgGQJmABFKDmABFKDmRLXKDmf4KKDmeZDDAn.diag
[2024-04-25 20:37:52] -rw-r--r-- 1 boinc boinc     20866 Apr 25 20:37 stderr.txt
[2024-04-25 20:37:52] HITS file was successfully produced:
[2024-04-25 20:37:52] -rw------- 1 boinc boinc 176198754 Apr 25 20:36 shared/HITS.pool.root.1
[2024-04-25 20:37:52]  *** Contents of shared directory: ***
[2024-04-25 20:37:52] total 617204
[2024-04-25 20:37:52] -rw-r--r-- 2 boinc boinc 453854401 Apr 25 17:19 ATLAS.root_0
[2024-04-25 20:37:52] -rw-r--r-- 2 boinc boinc     17537 Apr 25 17:19 start_atlas.sh
[2024-04-25 20:37:52] -rw-r--r-- 2 boinc boinc    474805 Apr 25 17:19 input.tar.gz
[2024-04-25 20:37:52] -rw------- 1 boinc boinc 176198754 Apr 25 20:36 HITS.pool.root.1
[2024-04-25 20:37:52] -rw------- 1 boinc boinc   1454080 Apr 25 20:37 result.tar.gz
20:37:54 (572402): run_atlas exited; CPU time 44353.982632
20:37:54 (572402): called boinc_finish(0)

</stderr_txt>
]]>

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