Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<message>
process exited with code 195 (0xc3, -61)</message>
<stderr_txt>
16:33:58 (3443141): wrapper (7.7.26015): starting
16:33:58 (3443141): wrapper: running run_atlas (--nthreads 4)
[2024-04-21 16:33:58] Arguments: --nthreads 4
[2024-04-21 16:33:58] Threads: 4
[2024-04-21 16:33:58] Checking for CVMFS
[2024-04-21 16:33:58] No cvmfs_config command found, will try listing directly
[2024-04-21 16:33:58] CVMFS is ok
[2024-04-21 16:33:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-21 16:33:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-21 16:33:58] Further information can be found at the LHC@home message board.
[2024-04-21 16:33:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-21 16:33:58] Checking for apptainer binary...
[2024-04-21 16:33:58] which: no apptainer in ((null))
[2024-04-21 16:33:58] apptainer is not installed, using version from CVMFS
[2024-04-21 16:33:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-21 16:33:59] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2024-04-21 16:33:59] apptainer works
[2024-04-21 16:33:59] Set ATHENA_PROC_NUMBER=4
[2024-04-21 16:33:59] Set ATHENA_CORE_NUMBER=4
[2024-04-21 16:33:59] Starting ATLAS job with PandaID=6180915437
[2024-04-21 16:33:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
22:48:03 (916054): wrapper (7.7.26015): starting
22:48:03 (916054): wrapper: running run_atlas (--nthreads 4)
[2024-04-22 22:48:03] Arguments: --nthreads 4
[2024-04-22 22:48:03] Threads: 4
[2024-04-22 22:48:03] This job has been restarted, cleaning up previous attempt
[2024-04-22 22:48:03] Checking for CVMFS
[2024-04-22 22:48:03] No cvmfs_config command found, will try listing directly
[2024-04-22 22:48:03] CVMFS is ok
[2024-04-22 22:48:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-22 22:48:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-22 22:48:03] Further information can be found at the LHC@home message board.
[2024-04-22 22:48:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-22 22:48:03] Checking for apptainer binary...
[2024-04-22 22:48:03] which: no apptainer in ((null))
[2024-04-22 22:48:03] apptainer is not installed, using version from CVMFS
[2024-04-22 22:48:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-22 22:48:04] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2024-04-22 22:48:04] apptainer works
[2024-04-22 22:48:04] Set ATHENA_PROC_NUMBER=4
[2024-04-22 22:48:04] Set ATHENA_CORE_NUMBER=4
[2024-04-22 22:48:04] Starting ATLAS job with PandaID=6180915437
[2024-04-22 22:48:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
19:45:40 (1957546): wrapper (7.7.26015): starting
19:45:40 (1957546): wrapper: running run_atlas (--nthreads 4)
[2024-04-23 19:45:40] Arguments: --nthreads 4
[2024-04-23 19:45:40] Threads: 4
[2024-04-23 19:45:40] This job has been restarted, cleaning up previous attempt
[2024-04-23 19:45:40] Checking for CVMFS
[2024-04-23 19:45:40] No cvmfs_config command found, will try listing directly
[2024-04-23 19:45:40] CVMFS is ok
[2024-04-23 19:45:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-23 19:45:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-23 19:45:40] Further information can be found at the LHC@home message board.
[2024-04-23 19:45:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-23 19:45:40] Checking for apptainer binary...
[2024-04-23 19:45:40] which: no apptainer in ((null))
[2024-04-23 19:45:40] apptainer is not installed, using version from CVMFS
[2024-04-23 19:45:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-23 19:45:41] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2024-04-23 19:45:41] apptainer works
[2024-04-23 19:45:41] Set ATHENA_PROC_NUMBER=4
[2024-04-23 19:45:41] Set ATHENA_CORE_NUMBER=4
[2024-04-23 19:45:41] Starting ATLAS job with PandaID=6180915437
[2024-04-23 19:45:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-23 19:51:41] Job failed
[2024-04-23 19:51:41] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2024-04-23 19:51:41] ++ pwd
[2024-04-23 19:51:41] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot32/slots/0/
[2024-04-23 19:51:41] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot32/slots/0/
[2024-04-23 19:51:41] + mv ATLAS.root_0 EVNT.38204341._000184.pool.root.1
[2024-04-23 19:51:41] mv: 'ATLAS.root_0' and 'EVNT.38204341._000184.pool.root.1' are the same file
[2024-04-23 19:51:41] + tar --strip-components=5 -xvf input.tar.gz
[2024-04-23 19:51:41] + umask 077
[2024-04-23 19:51:41] ++ date +%s
[2024-04-23 19:51:41] + ACCOUNTING_STARTTIME=1713894342
[2024-04-23 19:51:41] + echo 'Detecting resource accounting method available for the job.'
[2024-04-23 19:51:41] Detecting resource accounting method available for the job.
[2024-04-23 19:51:41] + JOB_ACCOUNTING=
[2024-04-23 19:51:41] + command -v arc-job-cgroup
[2024-04-23 19:51:41] + '[' -z '' ']'
[2024-04-23 19:51:41] + GNU_TIME=/usr/bin/time
[2024-04-23 19:51:41] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2024-04-23 19:51:41] Looking for /usr/bin/time tool for accounting measurements
[2024-04-23 19:51:41] + '[' '!' -z /usr/bin/time ']'
[2024-04-23 19:51:41] + /usr/bin/time --version
[2024-04-23 19:51:41] + echo 'GNU time found and will be used for job accounting.'
[2024-04-23 19:51:41] GNU time found and will be used for job accounting.
[2024-04-23 19:51:41] + JOB_ACCOUNTING=gnutime
[2024-04-23 19:51:41] + '[' -z gnutime ']'
[2024-04-23 19:51:41] + export PANDA_JSID=harvester-CERN_central_ACTA
[2024-04-23 19:51:41] + PANDA_JSID=harvester-CERN_central_ACTA
[2024-04-23 19:51:41] + export GTAG=http://aipanda403.cern.ch/data/jobs/2024-04-19/BOINC_MCORE/6180915437.out
[2024-04-23 19:51:41] + GTAG=http://aipanda403.cern.ch/data/jobs/2024-04-19/BOINC_MCORE/6180915437.out
[2024-04-23 19:51:41] + export PILOT_NOKILL=YES
[2024-04-23 19:51:41] + PILOT_NOKILL=YES
[2024-04-23 19:51:41] + export GRID_GLOBAL_JOBID=tHXKDmN50H5n9Rq4apoT9bVoABFKDmABFKDmtztZDmEeIKDm6iBagm
[2024-04-23 19:51:41] + GRID_GLOBAL_JOBID=tHXKDmN50H5n9Rq4apoT9bVoABFKDmABFKDmtztZDmEeIKDm6iBagm
[2024-04-23 19:51:41] + export GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/tHXKDmN50H5n9Rq4apoT9bVoABFKDmABFKDmtztZDmEeIKDm6iBagm
[2024-04-23 19:51:41] + GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/tHXKDmN50H5n9Rq4apoT9bVoABFKDmABFKDmtztZDmEeIKDm6iBagm
[2024-04-23 19:51:41] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2024-04-23 19:51:41] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2024-04-23 19:51:41] + export GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2024-04-23 19:51:41] + GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2024-04-23 19:51:41] ++ pwd
[2024-04-23 19:51:41] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot32/slots/0
[2024-04-23 19:51:41] + RUNTIME_JOB_STDIN=/dev/null
[2024-04-23 19:51:41] ++ pwd
[2024-04-23 19:51:41] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot32/slots/0/log.38204343._004469.job.log.1
[2024-04-23 19:51:41] ++ pwd
[2024-04-23 19:51:41] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot32/slots/0/log.38204343._004469.job.log.1
[2024-04-23 19:51:41] ++ pwd
[2024-04-23 19:51:41] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot32/slots/0.diag
[2024-04-23 19:51:41] + '[' '!' -z '' ']'
[2024-04-23 19:51:41] + RUNTIME_LOCAL_SCRATCH_DIR=
[2024-04-23 19:51:41] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2024-04-23 19:51:41] + RUNTIME_FRONTEND_SEES_NODE=
[2024-04-23 19:51:41] + RUNTIME_NODE_SEES_FRONTEND=yes
[2024-04-23 19:51:41] + '[' '!' -z '' ']'
[2024-04-23 19:51:41] + '[' -z yes ']'
[2024-04-23 19:51:41] ++ pwd
[2024-04-23 19:51:41] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot32/slots/0/tHXKDmN50H5n9Rq4apoT9bVoABFKDmABFKDmtztZDmEeIKDm6iBagm.diag
[2024-04-23 19:51:41] + runtimeenvironments=
[2024-04-23 19:51:41] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2024-04-23 19:51:41] + RTE_function_0 1
[2024-04-23 19:51:41] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-04-23 19:51:41] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-04-23 19:51:41] + export BOINC_APP=ATLAS
[2024-04-23 19:51:41] + BOINC_APP=ATLAS
[2024-04-23 19:51:41] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-04-23 19:51:41] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-04-23 19:51:41] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-04-23 19:51:41] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-04-23 19:51:41] + '[' -z 1 ']'
[2024-04-23 19:51:41] + '[' 1 == 1 ']'
[2024-04-23 19:51:41] + shift
[2024-04-23 19:51:41] + FRONTIER_SQUID_NDGF='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)'
[2024-04-23 19:51:41] + FRONTIER_BACKUP='(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-04-23 19:51:41] + FRONTIER_WPAD='(proxyconfigurl=http://grid-wpad/wpad.dat)'
[2024-04-23 19:51:41] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot32/slots/0/
[2024-04-23 19:51:41] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot32/slots/0/
[2024-04-23 19:51:41] + '[' -e /scratch/boinc/var/slot32/slots/0/init_data.xml ']'
[2024-04-23 19:51:41] + grep '<use_http_proxy/>' /scratch/boinc/var/slot32/slots/0/init_data.xml
[2024-04-23 19:51:41] + '[' -e /scratch/boinc/var/slot32/slots/0/init_data.xml ']'
[2024-04-23 19:51:41] + grep '.cern.ch</domain_name>' /scratch/boinc/var/slot32/slots/0/init_data.xml
[2024-04-23 19:51:41] + FRONTIER_SERVER_URLS='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)'
[2024-04-23 19:51:41] + FRONTIER_PROXY_URLS='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-04-23 19:51:41] + echo 'export FRONTIER_SERVER="(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)"'
[2024-04-23 19:51:41] + export 'FRONTIER_SERVER=(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-04-23 19:51:41] + FRONTIER_SERVER='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-04-23 19:51:41] + '[' 0 -ne 0 ']'
[2024-04-23 19:51:41] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2024-04-23 19:51:41] + '[' -f /etc/os-release ']'
[2024-04-23 19:51:41] +++ cat /etc/os-release
[2024-04-23 19:51:41] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2024-04-23 19:51:41] +++ NAME='CentOS Linux'
[2024-04-23 19:51:41] +++ VERSION='7 (Core)'
[2024-04-23 19:51:41] +++ ID=centos
[2024-04-23 19:51:41] +++ ID_LIKE='rhel fedora'
[2024-04-23 19:51:41] +++ VERSION_ID=7
[2024-04-23 19:51:41] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2024-04-23 19:51:41] +++ ANSI_COLOR='0;31'
[2024-04-23 19:51:41] +++ CPE_NAME=cpe:/o:centos:centos:7
[2024-04-23 19:51:41] +++ HOME_URL=https://www.centos.org/
[2024-04-23 19:51:41] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2024-04-23 19:51:41] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2024-04-23 19:51:41] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2024-04-23 19:51:41] +++ REDHAT_SUPPORT_PRODUCT=centos
[2024-04-23 19:51:41] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2024-04-23 19:51:41] ++ echo 'CentOS Linux 7 (Core)'
[2024-04-23 19:51:41] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2024-04-23 19:51:41] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2024-04-23 19:51:41] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2024-04-23 19:51:41] + HOME=/scratch/boinc/var/slot32/slots/0
[2024-04-23 19:51:41] + export HOME
[2024-04-23 19:51:41] + cd /scratch/boinc/var/slot32/slots/0
[2024-04-23 19:51:41] + '[' '!' -z '' ']'
[2024-04-23 19:51:41] + '[' -z '' ']'
[2024-04-23 19:51:41] ++ /bin/hostname -f
[2024-04-23 19:51:41] + nodename=skurut29.grid.cesnet.cz
[2024-04-23 19:51:41] + echo nodename=skurut29.grid.cesnet.cz
[2024-04-23 19:51:41] + echo Processors=1
[2024-04-23 19:51:41] + echo Benchmark=HEPSPEC:1.0
[2024-04-23 19:51:41] + executable=./runpilot2-wrapper.sh
[2024-04-23 19:51:41] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2024-04-23 19:51:41] ++ dd if=./runpilot2-wrapper.sh count=1
[2024-04-23 19:51:41] ++ tr -d '\0'
[2024-04-23 19:51:41] ++ head -n 1
[2024-04-23 19:51:41] + line1='#!/bin/bash'
[2024-04-23 19:51:41] ++ echo '#!/bin/bash'
[2024-04-23 19:51:41] ++ sed -n 's/^#! *//p'
[2024-04-23 19:51:41] + shebang=/bin/bash
[2024-04-23 19:51:41] ++ awk '{print $1}'
[2024-04-23 19:51:41] ++ echo /bin/bash
[2024-04-23 19:51:41] + interpreter=/bin/bash
[2024-04-23 19:51:41] + '[' /bin/bash = /usr/bin/env ']'
[2024-04-23 19:51:41] + '[' x/bin/bash = x ']'
[2024-04-23 19:51:41] + type /bin/bash
[2024-04-23 19:51:41] + '[' xgnutime = xgnutime ']'
[2024-04-23 19:51:41] + /usr/bin/time -o /scratch/boinc/var/slot32/slots/0/tHXKDmN50H5n9Rq4apoT9bVoABFKDmABFKDmtztZDmEeIKDm6iBagm.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type SCORE_HIMEM --pilotversion 3.7.2.4 -z -t --piloturl local --mute --container
[2024-04-23 19:51:41] + RESULT=2
[2024-04-23 19:51:41] + sed -i -e /nodename=/d /scratch/boinc/var/slot32/slots/0/tHXKDmN50H5n9Rq4apoT9bVoABFKDmABFKDmtztZDmEeIKDm6iBagm.diag
[2024-04-23 19:51:41] ++ grep domain_name init_data.xml
[2024-04-23 19:51:41] ++ awk -F '>' '{print $2}'
[2024-04-23 19:51:41] ++ awk -F '<' '{print $1}'
[2024-04-23 19:51:41] ++ sed -e 's# #_#g'
[2024-04-23 19:51:41] + hostname=skurut29.grid.cesnet.cz
[2024-04-23 19:51:41] ++ grep user_name init_data.xml
[2024-04-23 19:51:41] ++ awk -F '>' '{print $2}'
[2024-04-23 19:51:41] ++ awk -F '<' '{print $1}'
[2024-04-23 19:51:41] ++ sed -e 's# #_#g'
[2024-04-23 19:51:41] + username=praguelcg2
[2024-04-23 19:51:41] + nodename=praguelcg2@skurut29.grid.cesnet.cz
[2024-04-23 19:51:41] + echo nodename=praguelcg2@skurut29.grid.cesnet.cz
[2024-04-23 19:51:41] + '[' -n 4 ']'
[2024-04-23 19:51:41] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot32/slots/0/tHXKDmN50H5n9Rq4apoT9bVoABFKDmABFKDmtztZDmEeIKDm6iBagm.diag
[2024-04-23 19:51:41] + echo exitcode=2
[2024-04-23 19:51:41] + runtimeenvironments=
[2024-04-23 19:51:41] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2024-04-23 19:51:41] + RTE_function_0 2
[2024-04-23 19:51:41] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-04-23 19:51:41] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-04-23 19:51:41] + export BOINC_APP=ATLAS
[2024-04-23 19:51:41] + BOINC_APP=ATLAS
[2024-04-23 19:51:41] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-04-23 19:51:41] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-04-23 19:51:41] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-04-23 19:51:41] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-04-23 19:51:41] + '[' -z 2 ']'
[2024-04-23 19:51:41] + '[' 2 == 1 ']'
[2024-04-23 19:51:41] + '[' 0 -ne 0 ']'
[2024-04-23 19:51:41] + echo 'zip all output files'
[2024-04-23 19:51:41] + flist='*.diag '
[2024-04-23 19:51:41] + for f in ./heartbeat.json ./output.list ./log.38204343._004469.job.log.1 ./log.38204343._004469.job.log.1 ./gmlog/
[2024-04-23 19:51:41] + '[' -e ./heartbeat.json ']'
[2024-04-23 19:51:41] + flist='*.diag  ./heartbeat.json'
[2024-04-23 19:51:41] + for f in ./heartbeat.json ./output.list ./log.38204343._004469.job.log.1 ./log.38204343._004469.job.log.1 ./gmlog/
[2024-04-23 19:51:41] + '[' -e ./output.list ']'
[2024-04-23 19:51:41] + for f in ./heartbeat.json ./output.list ./log.38204343._004469.job.log.1 ./log.38204343._004469.job.log.1 ./gmlog/
[2024-04-23 19:51:41] + '[' -e ./log.38204343._004469.job.log.1 ']'
[2024-04-23 19:51:41] + flist='*.diag  ./heartbeat.json ./log.38204343._004469.job.log.1'
[2024-04-23 19:51:41] + for f in ./heartbeat.json ./output.list ./log.38204343._004469.job.log.1 ./log.38204343._004469.job.log.1 ./gmlog/
[2024-04-23 19:51:41] + '[' -e ./log.38204343._004469.job.log.1 ']'
[2024-04-23 19:51:41] + flist='*.diag  ./heartbeat.json ./log.38204343._004469.job.log.1 ./log.38204343._004469.job.log.1'
[2024-04-23 19:51:41] + for f in ./heartbeat.json ./output.list ./log.38204343._004469.job.log.1 ./log.38204343._004469.job.log.1 ./gmlog/
[2024-04-23 19:51:41] + '[' -e ./gmlog/ ']'
[2024-04-23 19:51:41] + '[' -f output.list ']'
[2024-04-23 19:51:41] + tar cvf result.tar.gz tHXKDmN50H5n9Rq4apoT9bVoABFKDmABFKDmtztZDmEeIKDm6iBagm.diag ./heartbeat.json ./log.38204343._004469.job.log.1 ./log.38204343._004469.job.log.1
[2024-04-23 19:51:41] + '[' xgnutime = xcgroup ']'
[2024-04-23 19:51:41] + '[' -n '' ']'
[2024-04-23 19:51:41] + '[' -n '' ']'
[2024-04-23 19:51:41] ++ date +%s
[2024-04-23 19:51:41] + ACCOUNTING_ENDTIME=1713894546
[2024-04-23 19:51:41] ++ date -d '1970-01-01 UTC 1713894342 seconds' +%Y%m%d%H%M%SZ
[2024-04-23 19:51:41] + echo LRMSStartTime=20240423194542Z
[2024-04-23 19:51:41] ++ date -d '1970-01-01 UTC 1713894546 seconds' +%Y%m%d%H%M%SZ
[2024-04-23 19:51:41] + echo LRMSEndTime=20240423194906Z
[2024-04-23 19:51:41] + echo walltime=204
[2024-04-23 19:51:41] + echo exitcode=2
[2024-04-23 19:51:41] + exit 2
[2024-04-23 19:51:41] ./runtime_log.err
[2024-04-23 19:51:41] ./PanDA_Pilot-6180915437/log.EVNTtoHITS
[2024-04-23 19:51:41] ./PanDA_Pilot-6180915437/prmon.log
[2024-04-23 19:51:41] ./PanDA_Pilot-6180915437/pilotlog.txt
[2024-04-23 19:51:41] ./PanDA_Pilot-6180915437/PoolFileCatalog.xml
[2024-04-23 19:51:41] ./log.38204343._004469.job.log.1
[2024-04-23 19:51:41] ./pilotlog.txt
[2024-04-23 19:51:41] ./runtime_log
[2024-04-23 19:51:41] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2024-04-23 19:51:41] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2024-04-23 19:51:41] ./pilot3/pilot/util/realtimelogger.py
[2024-04-23 19:51:41] ./pilot3/pilot/util/loggingsupport.py
07:23:47 (2482261): wrapper (7.7.26015): starting
07:23:47 (2482261): wrapper: running run_atlas (--nthreads 4)
[2024-04-24 07:23:47] Arguments: --nthreads 4
[2024-04-24 07:23:47] Threads: 4
[2024-04-24 07:23:47] This job has been restarted, cleaning up previous attempt
[2024-04-24 07:23:47] Checking for CVMFS
[2024-04-24 07:23:47] No cvmfs_config command found, will try listing directly
[2024-04-24 07:23:47] CVMFS is ok
[2024-04-24 07:23:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-24 07:23:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-24 07:23:47] Further information can be found at the LHC@home message board.
[2024-04-24 07:23:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-24 07:23:47] Checking for apptainer binary...
[2024-04-24 07:23:47] which: no apptainer in ((null))
[2024-04-24 07:23:47] apptainer is not installed, using version from CVMFS
[2024-04-24 07:23:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-24 07:23:48] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2024-04-24 07:23:48] apptainer works
[2024-04-24 07:23:48] Set ATHENA_PROC_NUMBER=4
[2024-04-24 07:23:48] Set ATHENA_CORE_NUMBER=4
[2024-04-24 07:23:48] Starting ATLAS job with PandaID=6180915437
[2024-04-24 07:23:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-24 07:29:19] Job failed
[2024-04-24 07:29:19] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2024-04-24 07:29:19] ++ pwd
[2024-04-24 07:29:19] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot32/slots/0/
[2024-04-24 07:29:19] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot32/slots/0/
[2024-04-24 07:29:19] + mv ATLAS.root_0 EVNT.38204341._000184.pool.root.1
[2024-04-24 07:29:19] mv: 'ATLAS.root_0' and 'EVNT.38204341._000184.pool.root.1' are the same file
[2024-04-24 07:29:19] + tar --strip-components=5 -xvf input.tar.gz
[2024-04-24 07:29:19] + umask 077
[2024-04-24 07:29:19] ++ date +%s
[2024-04-24 07:29:19] + ACCOUNTING_STARTTIME=1713936228
[2024-04-24 07:29:19] + echo 'Detecting resource accounting method available for the job.'
[2024-04-24 07:29:19] Detecting resource accounting method available for the job.
[2024-04-24 07:29:19] + JOB_ACCOUNTING=
[2024-04-24 07:29:19] + command -v arc-job-cgroup
[2024-04-24 07:29:19] + '[' -z '' ']'
[2024-04-24 07:29:19] + GNU_TIME=/usr/bin/time
[2024-04-24 07:29:19] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2024-04-24 07:29:19] Looking for /usr/bin/time tool for accounting measurements
[2024-04-24 07:29:19] + '[' '!' -z /usr/bin/time ']'
[2024-04-24 07:29:19] + /usr/bin/time --version
[2024-04-24 07:29:19] + echo 'GNU time found and will be used for job accounting.'
[2024-04-24 07:29:19] GNU time found and will be used for job accounting.
[2024-04-24 07:29:19] + JOB_ACCOUNTING=gnutime
[2024-04-24 07:29:19] + '[' -z gnutime ']'
[2024-04-24 07:29:19] + export PANDA_JSID=harvester-CERN_central_ACTA
[2024-04-24 07:29:19] + PANDA_JSID=harvester-CERN_central_ACTA
[2024-04-24 07:29:19] + export GTAG=http://aipanda403.cern.ch/data/jobs/2024-04-19/BOINC_MCORE/6180915437.out
[2024-04-24 07:29:19] + GTAG=http://aipanda403.cern.ch/data/jobs/2024-04-19/BOINC_MCORE/6180915437.out
[2024-04-24 07:29:19] + export PILOT_NOKILL=YES
[2024-04-24 07:29:19] + PILOT_NOKILL=YES
[2024-04-24 07:29:19] + export GRID_GLOBAL_JOBID=tHXKDmN50H5n9Rq4apoT9bVoABFKDmABFKDmtztZDmEeIKDm6iBagm
[2024-04-24 07:29:19] + GRID_GLOBAL_JOBID=tHXKDmN50H5n9Rq4apoT9bVoABFKDmABFKDmtztZDmEeIKDm6iBagm
[2024-04-24 07:29:19] + export GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/tHXKDmN50H5n9Rq4apoT9bVoABFKDmABFKDmtztZDmEeIKDm6iBagm
[2024-04-24 07:29:19] + GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/tHXKDmN50H5n9Rq4apoT9bVoABFKDmABFKDmtztZDmEeIKDm6iBagm
[2024-04-24 07:29:19] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2024-04-24 07:29:19] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2024-04-24 07:29:19] + export GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2024-04-24 07:29:19] + GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2024-04-24 07:29:19] ++ pwd
[2024-04-24 07:29:19] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot32/slots/0
[2024-04-24 07:29:19] + RUNTIME_JOB_STDIN=/dev/null
[2024-04-24 07:29:19] ++ pwd
[2024-04-24 07:29:19] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot32/slots/0/log.38204343._004469.job.log.1
[2024-04-24 07:29:19] ++ pwd
[2024-04-24 07:29:19] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot32/slots/0/log.38204343._004469.job.log.1
[2024-04-24 07:29:19] ++ pwd
[2024-04-24 07:29:19] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot32/slots/0.diag
[2024-04-24 07:29:19] + '[' '!' -z '' ']'
[2024-04-24 07:29:19] + RUNTIME_LOCAL_SCRATCH_DIR=
[2024-04-24 07:29:19] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2024-04-24 07:29:19] + RUNTIME_FRONTEND_SEES_NODE=
[2024-04-24 07:29:19] + RUNTIME_NODE_SEES_FRONTEND=yes
[2024-04-24 07:29:19] + '[' '!' -z '' ']'
[2024-04-24 07:29:19] + '[' -z yes ']'
[2024-04-24 07:29:19] ++ pwd
[2024-04-24 07:29:19] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot32/slots/0/tHXKDmN50H5n9Rq4apoT9bVoABFKDmABFKDmtztZDmEeIKDm6iBagm.diag
[2024-04-24 07:29:19] + runtimeenvironments=
[2024-04-24 07:29:19] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2024-04-24 07:29:19] + RTE_function_0 1
[2024-04-24 07:29:19] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-04-24 07:29:19] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-04-24 07:29:19] + export BOINC_APP=ATLAS
[2024-04-24 07:29:19] + BOINC_APP=ATLAS
[2024-04-24 07:29:19] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-04-24 07:29:19] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-04-24 07:29:19] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-04-24 07:29:19] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-04-24 07:29:19] + '[' -z 1 ']'
[2024-04-24 07:29:19] + '[' 1 == 1 ']'
[2024-04-24 07:29:19] + shift
[2024-04-24 07:29:19] + FRONTIER_SQUID_NDGF='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)'
[2024-04-24 07:29:19] + FRONTIER_BACKUP='(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-04-24 07:29:19] + FRONTIER_WPAD='(proxyconfigurl=http://grid-wpad/wpad.dat)'
[2024-04-24 07:29:19] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot32/slots/0/
[2024-04-24 07:29:19] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot32/slots/0/
[2024-04-24 07:29:19] + '[' -e /scratch/boinc/var/slot32/slots/0/init_data.xml ']'
[2024-04-24 07:29:19] + grep '<use_http_proxy/>' /scratch/boinc/var/slot32/slots/0/init_data.xml
[2024-04-24 07:29:19] + '[' -e /scratch/boinc/var/slot32/slots/0/init_data.xml ']'
[2024-04-24 07:29:19] + grep '.cern.ch</domain_name>' /scratch/boinc/var/slot32/slots/0/init_data.xml
[2024-04-24 07:29:19] + FRONTIER_SERVER_URLS='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)'
[2024-04-24 07:29:19] + FRONTIER_PROXY_URLS='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-04-24 07:29:19] + echo 'export FRONTIER_SERVER="(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)"'
[2024-04-24 07:29:19] + export 'FRONTIER_SERVER=(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-04-24 07:29:19] + FRONTIER_SERVER='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-04-24 07:29:19] + '[' 0 -ne 0 ']'
[2024-04-24 07:29:19] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2024-04-24 07:29:19] + '[' -f /etc/os-release ']'
[2024-04-24 07:29:19] +++ cat /etc/os-release
[2024-04-24 07:29:19] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2024-04-24 07:29:19] +++ NAME='CentOS Linux'
[2024-04-24 07:29:19] +++ VERSION='7 (Core)'
[2024-04-24 07:29:19] +++ ID=centos
[2024-04-24 07:29:19] +++ ID_LIKE='rhel fedora'
[2024-04-24 07:29:19] +++ VERSION_ID=7
[2024-04-24 07:29:19] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2024-04-24 07:29:19] +++ ANSI_COLOR='0;31'
[2024-04-24 07:29:19] +++ CPE_NAME=cpe:/o:centos:centos:7
[2024-04-24 07:29:19] +++ HOME_URL=https://www.centos.org/
[2024-04-24 07:29:19] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2024-04-24 07:29:19] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2024-04-24 07:29:19] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2024-04-24 07:29:19] +++ REDHAT_SUPPORT_PRODUCT=centos
[2024-04-24 07:29:19] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2024-04-24 07:29:19] ++ echo 'CentOS Linux 7 (Core)'
[2024-04-24 07:29:19] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2024-04-24 07:29:19] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2024-04-24 07:29:19] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2024-04-24 07:29:19] + HOME=/scratch/boinc/var/slot32/slots/0
[2024-04-24 07:29:19] + export HOME
[2024-04-24 07:29:19] + cd /scratch/boinc/var/slot32/slots/0
[2024-04-24 07:29:19] + '[' '!' -z '' ']'
[2024-04-24 07:29:19] + '[' -z '' ']'
[2024-04-24 07:29:19] ++ /bin/hostname -f
[2024-04-24 07:29:19] + nodename=skurut29.grid.cesnet.cz
[2024-04-24 07:29:19] + echo nodename=skurut29.grid.cesnet.cz
[2024-04-24 07:29:19] + echo Processors=1
[2024-04-24 07:29:19] + echo Benchmark=HEPSPEC:1.0
[2024-04-24 07:29:19] + executable=./runpilot2-wrapper.sh
[2024-04-24 07:29:19] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2024-04-24 07:29:19] ++ dd if=./runpilot2-wrapper.sh count=1
[2024-04-24 07:29:19] ++ head -n 1
[2024-04-24 07:29:19] ++ tr -d '\0'
[2024-04-24 07:29:19] + line1='#!/bin/bash'
[2024-04-24 07:29:19] ++ echo '#!/bin/bash'
[2024-04-24 07:29:19] ++ sed -n 's/^#! *//p'
[2024-04-24 07:29:19] + shebang=/bin/bash
[2024-04-24 07:29:19] ++ echo /bin/bash
[2024-04-24 07:29:19] ++ awk '{print $1}'
[2024-04-24 07:29:19] + interpreter=/bin/bash
[2024-04-24 07:29:19] + '[' /bin/bash = /usr/bin/env ']'
[2024-04-24 07:29:19] + '[' x/bin/bash = x ']'
[2024-04-24 07:29:19] + type /bin/bash
[2024-04-24 07:29:19] + '[' xgnutime = xgnutime ']'
[2024-04-24 07:29:19] + /usr/bin/time -o /scratch/boinc/var/slot32/slots/0/tHXKDmN50H5n9Rq4apoT9bVoABFKDmABFKDmtztZDmEeIKDm6iBagm.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type SCORE_HIMEM --pilotversion 3.7.2.4 -z -t --piloturl local --mute --container
[2024-04-24 07:29:19] + RESULT=2
[2024-04-24 07:29:19] + sed -i -e /nodename=/d /scratch/boinc/var/slot32/slots/0/tHXKDmN50H5n9Rq4apoT9bVoABFKDmABFKDmtztZDmEeIKDm6iBagm.diag
[2024-04-24 07:29:19] ++ grep domain_name init_data.xml
[2024-04-24 07:29:19] ++ awk -F '>' '{print $2}'
[2024-04-24 07:29:19] ++ awk -F '<' '{print $1}'
[2024-04-24 07:29:19] ++ sed -e 's# #_#g'
[2024-04-24 07:29:19] + hostname=skurut29.grid.cesnet.cz
[2024-04-24 07:29:19] ++ grep user_name init_data.xml
[2024-04-24 07:29:19] ++ awk -F '>' '{print $2}'
[2024-04-24 07:29:19] ++ awk -F '<' '{print $1}'
[2024-04-24 07:29:19] ++ sed -e 's# #_#g'
[2024-04-24 07:29:19] + username=praguelcg2
[2024-04-24 07:29:19] + nodename=praguelcg2@skurut29.grid.cesnet.cz
[2024-04-24 07:29:19] + echo nodename=praguelcg2@skurut29.grid.cesnet.cz
[2024-04-24 07:29:19] + '[' -n 4 ']'
[2024-04-24 07:29:19] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot32/slots/0/tHXKDmN50H5n9Rq4apoT9bVoABFKDmABFKDmtztZDmEeIKDm6iBagm.diag
[2024-04-24 07:29:19] + echo exitcode=2
[2024-04-24 07:29:19] + runtimeenvironments=
[2024-04-24 07:29:19] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2024-04-24 07:29:19] + RTE_function_0 2
[2024-04-24 07:29:19] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-04-24 07:29:19] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-04-24 07:29:19] + export BOINC_APP=ATLAS
[2024-04-24 07:29:19] + BOINC_APP=ATLAS
[2024-04-24 07:29:19] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-04-24 07:29:19] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-04-24 07:29:19] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-04-24 07:29:19] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-04-24 07:29:19] + '[' -z 2 ']'
[2024-04-24 07:29:19] + '[' 2 == 1 ']'
[2024-04-24 07:29:19] + '[' 0 -ne 0 ']'
[2024-04-24 07:29:19] + echo 'zip all output files'
[2024-04-24 07:29:19] + flist='*.diag '
[2024-04-24 07:29:19] + for f in ./heartbeat.json ./output.list ./log.38204343._004469.job.log.1 ./log.38204343._004469.job.log.1 ./gmlog/
[2024-04-24 07:29:19] + '[' -e ./heartbeat.json ']'
[2024-04-24 07:29:19] + flist='*.diag  ./heartbeat.json'
[2024-04-24 07:29:19] + for f in ./heartbeat.json ./output.list ./log.38204343._004469.job.log.1 ./log.38204343._004469.job.log.1 ./gmlog/
[2024-04-24 07:29:19] + '[' -e ./output.list ']'
[2024-04-24 07:29:19] + for f in ./heartbeat.json ./output.list ./log.38204343._004469.job.log.1 ./log.38204343._004469.job.log.1 ./gmlog/
[2024-04-24 07:29:19] + '[' -e ./log.38204343._004469.job.log.1 ']'
[2024-04-24 07:29:19] + flist='*.diag  ./heartbeat.json ./log.38204343._004469.job.log.1'
[2024-04-24 07:29:19] + for f in ./heartbeat.json ./output.list ./log.38204343._004469.job.log.1 ./log.38204343._004469.job.log.1 ./gmlog/
[2024-04-24 07:29:19] + '[' -e ./log.38204343._004469.job.log.1 ']'
[2024-04-24 07:29:19] + flist='*.diag  ./heartbeat.json ./log.38204343._004469.job.log.1 ./log.38204343._004469.job.log.1'
[2024-04-24 07:29:19] + for f in ./heartbeat.json ./output.list ./log.38204343._004469.job.log.1 ./log.38204343._004469.job.log.1 ./gmlog/
[2024-04-24 07:29:19] + '[' -e ./gmlog/ ']'
[2024-04-24 07:29:19] + '[' -f output.list ']'
[2024-04-24 07:29:19] + tar cvf result.tar.gz tHXKDmN50H5n9Rq4apoT9bVoABFKDmABFKDmtztZDmEeIKDm6iBagm.diag ./heartbeat.json ./log.38204343._004469.job.log.1 ./log.38204343._004469.job.log.1
[2024-04-24 07:29:19] + '[' xgnutime = xcgroup ']'
[2024-04-24 07:29:19] + '[' -n '' ']'
[2024-04-24 07:29:19] + '[' -n '' ']'
[2024-04-24 07:29:19] ++ date +%s
[2024-04-24 07:29:19] + ACCOUNTING_ENDTIME=1713936416
[2024-04-24 07:29:19] ++ date -d '1970-01-01 UTC 1713936228 seconds' +%Y%m%d%H%M%SZ
[2024-04-24 07:29:19] + echo LRMSStartTime=20240424072348Z
[2024-04-24 07:29:19] ++ date -d '1970-01-01 UTC 1713936416 seconds' +%Y%m%d%H%M%SZ
[2024-04-24 07:29:19] + echo LRMSEndTime=20240424072656Z
[2024-04-24 07:29:19] + echo walltime=188
[2024-04-24 07:29:19] + echo exitcode=2
[2024-04-24 07:29:19] + exit 2
[2024-04-24 07:29:19] ./runtime_log.err
[2024-04-24 07:29:19] ./PanDA_Pilot-6180915437/log.EVNTtoHITS
[2024-04-24 07:29:19] ./PanDA_Pilot-6180915437/prmon.log
[2024-04-24 07:29:19] ./PanDA_Pilot-6180915437/pilotlog.txt
[2024-04-24 07:29:19] ./PanDA_Pilot-6180915437/PoolFileCatalog.xml
[2024-04-24 07:29:19] ./log.38204343._004469.job.log.1
[2024-04-24 07:29:19] ./pilotlog.txt
[2024-04-24 07:29:19] ./runtime_log
[2024-04-24 07:29:19] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2024-04-24 07:29:19] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2024-04-24 07:29:19] ./pilot3/pilot/util/realtimelogger.py
[2024-04-24 07:29:19] ./pilot3/pilot/util/loggingsupport.py
08:18:29 (2482261): run_atlas exited; CPU time 12.543023
08:18:29 (2482261): app exit status: 0x1
08:18:29 (2482261): called boinc_finish(195)

</stderr_txt>
]]>

©2024 CERN