Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:54:21 (1799098): wrapper (7.7.26015): starting
01:54:21 (1799098): wrapper: running run_atlas (--nthreads 4)
[2024-04-25 01:54:21] Arguments: --nthreads 4
[2024-04-25 01:54:21] Threads: 4
[2024-04-25 01:54:21] Checking for CVMFS
[2024-04-25 01:54:21] No cvmfs_config command found, will try listing directly
[2024-04-25 01:54:22] CVMFS is ok
[2024-04-25 01:54:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-25 01:54:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-25 01:54:22] Further information can be found at the LHC@home message board.
[2024-04-25 01:54:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-25 01:54:22] Checking for apptainer binary...
[2024-04-25 01:54:22] which: no apptainer in ((null))
[2024-04-25 01:54:22] apptainer is not installed, using version from CVMFS
[2024-04-25 01:54:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-25 01:54:23] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2024-04-25 01:54:23] apptainer works
[2024-04-25 01:54:23] Set ATHENA_PROC_NUMBER=4
[2024-04-25 01:54:23] Set ATHENA_CORE_NUMBER=4
[2024-04-25 01:54:23] Starting ATLAS job with PandaID=6180863514
[2024-04-25 01:54:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-25 05:09:48]  *** The last 200 lines of the pilot log: ***
[2024-04-25 05:09:48]  ddm_activity=['write_lan', 'write_wan']
[2024-04-25 05:09:48]  ddmendpoint=NDGF-T1_DATADISK
[2024-04-25 05:09:48]  direct_access_lan=False
[2024-04-25 05:09:48]  direct_access_wan=False
[2024-04-25 05:09:48]  domain=
[2024-04-25 05:09:48]  filesize=299754
[2024-04-25 05:09:48]  filetype=log
[2024-04-25 05:09:48]  guid=a352b036-86ad-457c-a622-df9d0c5a2f60
[2024-04-25 05:09:48]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-25 05:09:48]  is_tar=False
[2024-04-25 05:09:48]  lfn=log.38204343._001756.job.log.tgz.1
[2024-04-25 05:09:48]  mtime=0
[2024-04-25 05:09:48]  protocol_id=None
[2024-04-25 05:09:48]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-25 05:09:48]  replicas=None
[2024-04-25 05:09:48]  scope=mc23_13p6TeV
[2024-04-25 05:09:48]  status=None
[2024-04-25 05:09:48]  status_code=0
[2024-04-25 05:09:48]  storage_token=
[2024-04-25 05:09:48]  surl=/scratch/boinc/var/slot20/slots/0/PanDA_Pilot-6180863514/log.38204343._001756.job.log.tgz.1
[2024-04-25 05:09:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ba/e1/log.38204343._001756.job.log.tgz.1
[2024-04-25 05:09:48]  workdir=None
[2024-04-25 05:09:48] ]
[2024-04-25 05:09:48] 2024-04-25 03:09:27,255 | INFO     | transferring file log.38204343._001756.job.log.tgz.1 from /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-6180863514/log.38204343._001756.job.log.tgz.1 to /scratch/b
[2024-04-25 05:09:48] 2024-04-25 03:09:27,255 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-6180863514/log.38204343._001756.job.log.tgz.1 /scratch/boinc/var/slot20/slots/0/lo
[2024-04-25 05:09:48] 2024-04-25 03:09:27,269 | INFO     | adding to output.list: log.38204343._001756.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ba/e1/log.38204343._001756.job.log.tg
[2024-04-25 05:09:48] 2024-04-25 03:09:27,270 | INFO     | summary of transferred files:
[2024-04-25 05:09:48] 2024-04-25 03:09:27,270 | INFO     |  -- lfn=log.38204343._001756.job.log.tgz.1, status_code=0, status=transferred
[2024-04-25 05:09:48] 2024-04-25 03:09:27,270 | INFO     | stage-out finished correctly
[2024-04-25 05:09:48] 2024-04-25 03:09:27,490 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-25 05:09:48] 2024-04-25 03:09:28,824 | WARNING  | process 1810714 is no longer using CPU - aborting
[2024-04-25 05:09:48] 2024-04-25 03:09:28,824 | INFO     | will not send any job update
[2024-04-25 05:09:48] 2024-04-25 03:09:29,435 | INFO     | job 6180863514 has state=finished
[2024-04-25 05:09:48] 2024-04-25 03:09:29,435 | INFO     | preparing for final server update for job 6180863514 in state='finished'
[2024-04-25 05:09:48] 2024-04-25 03:09:29,435 | INFO     | this job has now completed (state=finished)
[2024-04-25 05:09:48] 2024-04-25 03:09:29,435 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-25 05:09:48] 2024-04-25 03:09:29,435 | INFO     | job 6180863514 has finished - writing final server update
[2024-04-25 05:09:48] 2024-04-25 03:09:29,436 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1730015/.job.ad'
[2024-04-25 05:09:48] 2024-04-25 03:09:29,436 | INFO     | total number of processed events: 400 (read)
[2024-04-25 05:09:48] 2024-04-25 03:09:29,439 | INFO     | executing command: lscpu
[2024-04-25 05:09:48] 2024-04-25 03:09:29,480 | INFO     | found 32 cores (16 cores per socket, 2 sockets)
[2024-04-25 05:09:48] 2024-04-25 03:09:29,480 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-25 05:09:48] 2024-04-25 03:09:29,509 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-25 05:09:48] 2024-04-25 03:09:31,326 | INFO     | monitor loop #898: job 0:6180863514 is in state 'finished'
[2024-04-25 05:09:48] 2024-04-25 03:09:31,327 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-25 05:09:48] 2024-04-25 03:09:32,567 | INFO     | CPU arch script returned: x86-64-v4
[2024-04-25 05:09:48] 2024-04-25 03:09:32,568 | INFO     | using path: /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-6180863514/memory_monitor_summary.json (trf name=prmon)
[2024-04-25 05:09:48] 2024-04-25 03:09:32,568 | INFO     | extracted standard info from prmon json
[2024-04-25 05:09:48] 2024-04-25 03:09:32,569 | INFO     | extracted standard memory fields from prmon json
[2024-04-25 05:09:48] 2024-04-25 03:09:32,569 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-25 05:09:48] 2024-04-25 03:09:32,569 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-25 05:09:48] 2024-04-25 03:09:32,571 | INFO     | fitting pss+swap vs Time
[2024-04-25 05:09:48] 2024-04-25 03:09:32,573 | INFO     | current chi2=1.1064411214925216 (change=42.78056453954293 %)
[2024-04-25 05:09:48] 2024-04-25 03:09:32,574 | INFO     | current chi2=1.1070838773588378 (change=-0.058092188895618534 %)
[2024-04-25 05:09:48] 2024-04-25 03:09:32,574 | INFO     | right removable region: 181
[2024-04-25 05:09:48] 2024-04-25 03:09:32,575 | INFO     | current chi2=0.8513398070211505 (change=55.97309048216358 %)
[2024-04-25 05:09:48] 2024-04-25 03:09:32,575 | INFO     | current chi2=0.8514220889888223 (change=-0.00966499710141584 %)
[2024-04-25 05:09:48] 2024-04-25 03:09:32,575 | INFO     | left removable region: 20
[2024-04-25 05:09:48] 2024-04-25 03:09:32,576 | INFO     | current memory leak: 1.29 B/s (using 161 data points, chi2=0.00)
[2024-04-25 05:09:48] 2024-04-25 03:09:32,576 | INFO     | ..............................
[2024-04-25 05:09:48] 2024-04-25 03:09:32,577 | INFO     | . Timing measurements:
[2024-04-25 05:09:48] 2024-04-25 03:09:32,577 | INFO     | . get job = 0 s
[2024-04-25 05:09:48] 2024-04-25 03:09:32,577 | INFO     | . initial setup = 1 s
[2024-04-25 05:09:48] 2024-04-25 03:09:32,577 | INFO     | . payload setup = 4 s
[2024-04-25 05:09:48] 2024-04-25 03:09:32,577 | INFO     | . stage-in = 0 s
[2024-04-25 05:09:48] 2024-04-25 03:09:32,577 | INFO     | . payload execution = 11672 s
[2024-04-25 05:09:48] 2024-04-25 03:09:32,577 | INFO     | . stage-out = 0 s
[2024-04-25 05:09:48] 2024-04-25 03:09:32,577 | INFO     | . log creation = 0 s
[2024-04-25 05:09:48] 2024-04-25 03:09:32,577 | INFO     | ..............................
[2024-04-25 05:09:48] 2024-04-25 03:09:32,644 | INFO     | 
[2024-04-25 05:09:48] 2024-04-25 03:09:32,644 | INFO     | job summary report
[2024-04-25 05:09:48] 2024-04-25 03:09:32,644 | INFO     | --------------------------------------------------
[2024-04-25 05:09:48] 2024-04-25 03:09:32,644 | INFO     | PanDA job id: 6180863514
[2024-04-25 05:09:48] 2024-04-25 03:09:32,645 | INFO     | task id: 38204343
[2024-04-25 05:09:48] 2024-04-25 03:09:32,645 | INFO     | errors: (none)
[2024-04-25 05:09:48] 2024-04-25 03:09:32,645 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-25 05:09:48] 2024-04-25 03:09:32,645 | INFO     | pilot state: finished 
[2024-04-25 05:09:48] 2024-04-25 03:09:32,645 | INFO     | transexitcode: 0
[2024-04-25 05:09:48] 2024-04-25 03:09:32,645 | INFO     | exeerrorcode: 0
[2024-04-25 05:09:48] 2024-04-25 03:09:32,645 | INFO     | exeerrordiag: 
[2024-04-25 05:09:48] 2024-04-25 03:09:32,645 | INFO     | exitcode: 0
[2024-04-25 05:09:48] 2024-04-25 03:09:32,645 | INFO     | exitmsg: OK
[2024-04-25 05:09:48] 2024-04-25 03:09:32,645 | INFO     | cpuconsumptiontime: 45852 s
[2024-04-25 05:09:48] 2024-04-25 03:09:32,645 | INFO     | nevents: 400
[2024-04-25 05:09:48] 2024-04-25 03:09:32,645 | INFO     | neventsw: 0
[2024-04-25 05:09:48] 2024-04-25 03:09:32,645 | INFO     | pid: 1810714
[2024-04-25 05:09:48] 2024-04-25 03:09:32,645 | INFO     | pgrp: 1810714
[2024-04-25 05:09:48] 2024-04-25 03:09:32,645 | INFO     | corecount: 4
[2024-04-25 05:09:48] 2024-04-25 03:09:32,645 | INFO     | event service: False
[2024-04-25 05:09:48] 2024-04-25 03:09:32,645 | INFO     | sizes: {0: 2374610, 1: 2375545, 4: 2375751, 11: 2375779, 11680: 2405278, 11682: 2414444, 11688: 2414558}
[2024-04-25 05:09:48] 2024-04-25 03:09:32,645 | INFO     | --------------------------------------------------
[2024-04-25 05:09:48] 2024-04-25 03:09:32,645 | INFO     | 
[2024-04-25 05:09:48] 2024-04-25 03:09:32,645 | INFO     | executing command: ls -lF /scratch/boinc/var/slot20/slots/0
[2024-04-25 05:09:48] 2024-04-25 03:09:32,663 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-25 05:09:48] 2024-04-25 03:09:32,664 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-25 05:09:48] 2024-04-25 03:09:32,664 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-25 05:09:48] 2024-04-25 03:09:32,664 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-25 05:09:48] 2024-04-25 03:09:32,664 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-25 05:09:48] 2024-04-25 03:09:32,664 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-25 05:09:48] 2024-04-25 03:09:32,664 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-25 05:09:48] 2024-04-25 03:09:32,664 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-25 05:09:48] 2024-04-25 03:09:32,664 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-25 05:09:48] 2024-04-25 03:09:32,664 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-25 05:09:48] 2024-04-25 03:09:32,664 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-25 05:09:48] 2024-04-25 03:09:32,664 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-25 05:09:48] 2024-04-25 03:09:32,664 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-25 05:09:48] 2024-04-25 03:09:32,664 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-25 05:09:48] 2024-04-25 03:09:32,664 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-25 05:09:48] 2024-04-25 03:09:32,664 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-25 05:09:48] 2024-04-25 03:09:32,665 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-25 05:09:48] 2024-04-25 03:09:32,665 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-25 05:09:48] 2024-04-25 03:09:32,665 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-25 05:09:48] 2024-04-25 03:09:32,665 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-25 05:09:48] 2024-04-25 03:09:32,665 | INFO     | job 6180863514 has completed (purged errors)
[2024-04-25 05:09:48] 2024-04-25 03:09:32,665 | INFO     | overall cleanup function is called
[2024-04-25 05:09:48] 2024-04-25 03:09:33,667 | INFO     | --- collectZombieJob: --- 10, [1810714]
[2024-04-25 05:09:48] 2024-04-25 03:09:33,667 | INFO     | zombie collector waiting for pid 1810714
[2024-04-25 05:09:48] 2024-04-25 03:09:33,668 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-25 05:09:48] 2024-04-25 03:09:34,673 | INFO     | collected zombie processes
[2024-04-25 05:09:48] 2024-04-25 03:09:34,673 | INFO     | will now attempt to kill all subprocesses of pid=1810714
[2024-04-25 05:09:48] 2024-04-25 03:09:34,815 | INFO     | process IDs to be killed: [1810714] (in reverse order)
[2024-04-25 05:09:48] 2024-04-25 03:09:34,906 | WARNING  | found no corresponding commands to process id(s)
[2024-04-25 05:09:48] 2024-04-25 03:09:34,906 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-25 05:09:48] 2024-04-25 03:09:34,912 | INFO     | did not find any defunct processes belonging to 1810714
[2024-04-25 05:09:48] 2024-04-25 03:09:34,918 | INFO     | did not find any defunct processes belonging to 1810714
[2024-04-25 05:09:48] 2024-04-25 03:09:34,918 | INFO     | ready for new job
[2024-04-25 05:09:48] 2024-04-25 03:09:34,918 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-25 05:09:48] 2024-04-25 03:09:34,919 | INFO     | *************************************
[2024-04-25 05:09:48] 2024-04-25 03:09:34,920 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-25 05:09:48] 2024-04-25 03:09:34,920 | INFO     | *************************************
[2024-04-25 05:09:48] 2024-04-25 03:09:34,920 | INFO     | 
[2024-04-25 05:09:48] 2024-04-25 03:09:34,922 | INFO     | architecture information:
[2024-04-25 05:09:48] 2024-04-25 03:09:34,922 | INFO     | executing command: cat /etc/os-release
[2024-04-25 05:09:48] 2024-04-25 03:09:34,938 | INFO     | cat /etc/os-release:
[2024-04-25 05:09:48] NAME="CentOS Linux"
[2024-04-25 05:09:48] VERSION="7 (Core)"
[2024-04-25 05:09:48] ID="centos"
[2024-04-25 05:09:48] ID_LIKE="rhel fedora"
[2024-04-25 05:09:48] VERSION_ID="7"
[2024-04-25 05:09:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-25 05:09:48] ANSI_COLOR="0;31"
[2024-04-25 05:09:48] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-25 05:09:48] HOME_URL="https://www.centos.org/"
[2024-04-25 05:09:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-25 05:09:48] 
[2024-04-25 05:09:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-25 05:09:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-25 05:09:48] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-25 05:09:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-25 05:09:48] 
[2024-04-25 05:09:48] 2024-04-25 03:09:34,939 | INFO     | *************************************
[2024-04-25 05:09:48] 2024-04-25 03:09:35,442 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2024-04-25 05:09:48] 2024-04-25 03:09:35,463 | INFO     | sufficient remaining disk space (634642235392 B)
[2024-04-25 05:09:48] 2024-04-25 03:09:35,464 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-25 05:09:48] 2024-04-25 03:09:35,464 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-25 05:09:48] 2024-04-25 03:09:35,464 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-25 05:09:48] 2024-04-25 03:09:35,465 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-25 05:09:48] 2024-04-25 03:09:35,465 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-25 05:09:48] 2024-04-25 03:09:35,465 | INFO     | found 0 job(s) in 20 queues
[2024-04-25 05:09:48] 2024-04-25 03:09:35,465 | INFO     | aborting loop
[2024-04-25 05:09:48] 2024-04-25 03:09:35,466 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-25 05:09:48] 2024-04-25 03:09:35,466 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-25 05:09:48] 2024-04-25 03:09:35,555 | INFO     | all payload control threads have been joined
[2024-04-25 05:09:48] 2024-04-25 03:09:35,659 | INFO     | all job control threads have been joined
[2024-04-25 05:09:48] 2024-04-25 03:09:36,212 | INFO     | all data control threads have been joined
[2024-04-25 05:09:48] 2024-04-25 03:09:36,465 | INFO     | [job] retrieve thread has finished
[2024-04-25 05:09:48] 2024-04-25 03:09:36,471 | INFO     | [job] job monitor thread has finished
[2024-04-25 05:09:48] 2024-04-25 03:09:36,488 | INFO     | [payload] validate_pre thread has finished
[2024-04-25 05:09:48] 2024-04-25 03:09:36,496 | INFO     | [job] create_data_payload thread has finished
[2024-04-25 05:09:48] 2024-04-25 03:09:36,560 | INFO     | [payload] control thread has finished
[2024-04-25 05:09:48] 2024-04-25 03:09:36,664 | INFO     | [job] control thread has finished
[2024-04-25 05:09:48] 2024-04-25 03:09:36,802 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-25 05:09:48] 2024-04-25 03:09:36,860 | INFO     | [payload] failed_post thread has finished
[2024-04-25 05:09:48] 2024-04-25 03:09:36,918 | INFO     | [payload] execute_payloads thread has finished
[2024-04-25 05:09:48] 2024-04-25 03:09:37,216 | INFO     | [data] control thread has finished
[2024-04-25 05:09:48] 2024-04-25 03:09:37,470 | INFO     | [data] copytool_out thread has finished
[2024-04-25 05:09:48] 2024-04-25 03:09:37,619 | INFO     | [data] copytool_in thread has finished
[2024-04-25 05:09:48] 2024-04-25 03:09:37,654 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-25 05:09:48] 2024-04-25 03:09:37,683 | INFO     | [payload] validate_post thread has finished
[2024-04-25 05:09:48] 2024-04-25 03:09:37,807 | INFO     | [job] validate thread has finished
[2024-04-25 05:09:48] 2024-04-25 03:09:38,049 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-25 05:09:48] 2024-04-25 03:09:38,659 | INFO     | [job] queue monitor thread has finished
[2024-04-25 05:09:48] 2024-04-25 03:09:42,054 | INFO     | [data] queue_monitor thread has finished
[2024-04-25 05:09:48] 2024-04-25 03:09:42,571 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47117808215104)>', '<ExcThread(monitor, started 47117979449088)>']
[2024-04-25 05:09:48] 2024-04-25 03:09:43,502 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-25 05:09:48] 2024-04-25 03:09:43,503 | INFO     | [monitor] control thread has ended
[2024-04-25 05:09:48] 2024-04-25 03:09:47,596 | INFO     | all workflow threads have been joined
[2024-04-25 05:09:48] 2024-04-25 03:09:47,596 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-25 05:09:48] 2024-04-25 03:09:47,597 | INFO     | traces error code: 0
[2024-04-25 05:09:48] 2024-04-25 03:09:47,597 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-25 05:09:48] 2024-04-25 03:09:47,710 [wrapper] ==== pilot stdout END ====
[2024-04-25 05:09:48] 2024-04-25 03:09:47,714 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-25 05:09:48] 2024-04-25 03:09:47,716 [wrapper] pilotpid: 1803447
[2024-04-25 05:09:48] 2024-04-25 03:09:47,718 [wrapper] Pilot exit status: 0
[2024-04-25 05:09:48] 2024-04-25 03:09:47,726 [wrapper] pandaids: 6180863514
[2024-04-25 05:09:48] 2024-04-25 03:09:47,803 [wrapper] cleanup: SIGTERM to supervisor_pilot 2491818 1803448
[2024-04-25 05:09:48] 2024-04-25 03:09:47,805 [wrapper] Test setup, not cleaning
[2024-04-25 05:09:48] 2024-04-25 03:09:47,807 [wrapper] ==== wrapper stdout END ====
[2024-04-25 05:09:48] 2024-04-25 03:09:47,809 [wrapper] ==== wrapper stderr END ====
[2024-04-25 05:09:48] 2024-04-25 03:09:47,813 [wrapper] apfmon messages muted
[2024-04-25 05:09:48]  *** Error codes and diagnostics ***
[2024-04-25 05:09:48]     "exeErrorCode": 0,
[2024-04-25 05:09:48]     "exeErrorDiag": "",
[2024-04-25 05:09:48]     "pilotErrorCode": 0,
[2024-04-25 05:09:48]     "pilotErrorDiag": "",
[2024-04-25 05:09:48]  *** Listing of results directory ***
[2024-04-25 05:09:48] total 619636
[2024-04-25 05:09:48] -rw-r--r-- 1 boinc boinc    462745 Apr 19 04:05 pilot3.tar.gz
[2024-04-25 05:09:48] -rwx------ 1 boinc boinc     32211 Apr 19 04:07 runpilot2-wrapper.sh
[2024-04-25 05:09:48] -rw-r--r-- 1 boinc boinc      6185 Apr 19 04:07 queuedata.json
[2024-04-25 05:09:48] -rw-r--r-- 1 boinc boinc       100 Apr 25 01:54 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-25 05:09:48] -rwxr-xr-x 1 boinc boinc      7986 Apr 25 01:54 run_atlas
[2024-04-25 05:09:48] -rw-r--r-- 1 boinc boinc       105 Apr 25 01:54 job.xml
[2024-04-25 05:09:48] -rw-r--r-- 2 boinc boinc 450264749 Apr 25 01:54 EVNT.38204341._000072.pool.root.1
[2024-04-25 05:09:48] drwxrwx--x 2 boinc boinc      4096 Apr 25 01:54 shared
[2024-04-25 05:09:48] -rw-r--r-- 2 boinc boinc    474762 Apr 25 01:54 input.tar.gz
[2024-04-25 05:09:48] -rw-r--r-- 1 boinc boinc      6663 Apr 25 01:54 init_data.xml
[2024-04-25 05:09:48] -rw-r--r-- 2 boinc boinc     17537 Apr 25 01:54 start_atlas.sh
[2024-04-25 05:09:48] -rw-r--r-- 1 boinc boinc         0 Apr 25 01:54 boinc_lockfile
[2024-04-25 05:09:48] -rw-r--r-- 1 boinc boinc      2609 Apr 25 01:54 pandaJob.out
[2024-04-25 05:09:48] -rw------- 1 boinc boinc       424 Apr 25 01:54 setup.sh.local
[2024-04-25 05:09:48] -rw------- 1 boinc boinc    990246 Apr 25 01:54 agis_schedconf.cvmfs.json
[2024-04-25 05:09:48] -rw------- 1 boinc boinc   1315027 Apr 25 01:54 cric_ddmendpoints.json
[2024-04-25 05:09:48] drwx------ 4 boinc boinc      4096 Apr 25 01:54 pilot3
[2024-04-25 05:09:48] -rw------- 1 boinc boinc 177937658 Apr 25 05:08 HITS.38204343._001756.pool.root.1
[2024-04-25 05:09:48] -rw------- 1 boinc boinc        95 Apr 25 05:09 pilot_heartbeat.json
[2024-04-25 05:09:48] -rw-r--r-- 1 boinc boinc       532 Apr 25 05:09 boinc_task_state.xml
[2024-04-25 05:09:48] -rw------- 1 boinc boinc      1049 Apr 25 05:09 memory_monitor_summary.json
[2024-04-25 05:09:48] -rw------- 1 boinc boinc         0 Apr 25 05:09 agis_ddmendpoints.agis.ALL.json
[2024-04-25 05:09:48] -rw------- 1 boinc boinc    299754 Apr 25 05:09 log.38204343._001756.job.log.tgz.1
[2024-04-25 05:09:48] -rw------- 1 boinc boinc      7734 Apr 25 05:09 heartbeat.json
[2024-04-25 05:09:48] -rw-r--r-- 1 boinc boinc      8192 Apr 25 05:09 boinc_mmap_file
[2024-04-25 05:09:48] -rw-r--r-- 1 boinc boinc        28 Apr 25 05:09 wrapper_checkpoint.txt
[2024-04-25 05:09:48] -rw------- 1 boinc boinc      4344 Apr 25 05:09 pilotlog.txt
[2024-04-25 05:09:48] -rw------- 1 boinc boinc   1110108 Apr 25 05:09 log.38204343._001756.job.log.1
[2024-04-25 05:09:48] -rw------- 1 boinc boinc       357 Apr 25 05:09 output.list
[2024-04-25 05:09:48] -rw-r--r-- 1 boinc boinc       620 Apr 25 05:09 runtime_log
[2024-04-25 05:09:48] -rw------- 1 boinc boinc   1433600 Apr 25 05:09 result.tar.gz
[2024-04-25 05:09:48] -rw------- 1 boinc boinc       657 Apr 25 05:09 x3ALDmFqsH5nfZGDcpSWOuwoABFKDmABFKDmtxRSDmvHHKDm6wwVRm.diag
[2024-04-25 05:09:48] -rw-r--r-- 1 boinc boinc     11410 Apr 25 05:09 runtime_log.err
[2024-04-25 05:09:48] -rw-r--r-- 1 boinc boinc     20892 Apr 25 05:09 stderr.txt
[2024-04-25 05:09:48] HITS file was successfully produced:
[2024-04-25 05:09:48] -rw------- 1 boinc boinc 177937658 Apr 25 05:08 shared/HITS.pool.root.1
[2024-04-25 05:09:48]  *** Contents of shared directory: ***
[2024-04-25 05:09:48] total 615372
[2024-04-25 05:09:48] -rw-r--r-- 2 boinc boinc 450264749 Apr 25 01:54 ATLAS.root_0
[2024-04-25 05:09:48] -rw-r--r-- 2 boinc boinc    474762 Apr 25 01:54 input.tar.gz
[2024-04-25 05:09:48] -rw-r--r-- 2 boinc boinc     17537 Apr 25 01:54 start_atlas.sh
[2024-04-25 05:09:48] -rw------- 1 boinc boinc 177937658 Apr 25 05:08 HITS.pool.root.1
[2024-04-25 05:09:48] -rw------- 1 boinc boinc   1433600 Apr 25 05:09 result.tar.gz
05:09:49 (1799098): run_atlas exited; CPU time 45606.785514
05:09:49 (1799098): called boinc_finish(0)

</stderr_txt>
]]>

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