1) Message boards : Theory Application : Probing /cvfms/grid.cern.ch... Failed! (Message 48307)
Posted 24 Jul 2023 by [AF>Le_Pommier] Jerome_C2005
Post:
Hi

today I decided to try my luck again on my Intel iMac, I got 8 theory tasks, all started to "crunch" during several minutes and then I noticed they stopped using CPU and saw this in the stderr.log of each task 

2023-07-24 20:26:32 (45394): Guest Log: 00:00:00.000390 main     Log opened 2023-07-24T18:26:33.395987000Z
2023-07-24 20:26:32 (45394): Guest Log: 00:00:00.008490 main     OS Product: Linux
2023-07-24 20:26:32 (45394): Guest Log: 00:00:00.008625 main     OS Release: 4.14.76-13.cernvm.x86_64
2023-07-24 20:26:32 (45394): Guest Log: 00:00:00.008716 main     OS Version: #1 SMP Tue Oct 16 18:26:15 CEST 2018
2023-07-24 20:26:32 (45394): Guest Log: 00:00:00.009195 main     Executable: /usr/sbin/VBoxService
2023-07-24 20:26:32 (45394): Guest Log: 00:00:00.009197 main     Process ID: 3220
2023-07-24 20:26:32 (45394): Guest Log: 00:00:00.009199 main     Package type: LINUX_64BITS_GENERIC
2023-07-24 20:26:32 (45394): Guest Log: 00:00:00.047837 main     5.2.6 r120293 started. Verbose level = 0
2023-07-24 20:28:09 (45394): Guest Log: 20:28:09 CEST +02:00 2023-07-24: cranky: [INFO] Detected Theory App
2023-07-24 20:28:09 (45394): Guest Log: 20:28:09 CEST +02:00 2023-07-24: cranky: [INFO] Checking CVMFS.
2023-07-24 20:28:10 (45394): Guest Log: Probing /cvmfs/sft.cern.ch... Failed!
2023-07-24 20:28:10 (45394): Guest Log: 20:28:11 CEST +02:00 2023-07-24: cranky: [ERROR] 'cvmfs_config probe sft.cern.ch' failed.

and then I found this thread, I had already cancelled them after 15mn idle.

Seems not to be a new issue but I note that the URL is not exactly the same for me than for the topic creator (but it was also 2 years ago, things change).
2) Message boards : ATLAS application : ATLAS vbox v2.03 (Message 47614)
Posted 24 Dec 2022 by [AF>Le_Pommier] Jerome_C2005
Post:
Not working well at all actually : only 2 tasks did complete with actual calculation performed, all the others ran for hours using 0% CPU (the worst : more than 13 hours before I found it), I just cancelled the latest after 6 hours and no CPU usage. Even one theory simulation started the same way (I could see it was not using CPU) and then crashed by itself.

No more work for me...
3) Message boards : ATLAS application : ATLAS vbox v2.03 (Message 47599)
Posted 22 Dec 2022 by [AF>Le_Pommier] Jerome_C2005
Post:
Oh well, now it's working.

https://lhcathome.cern.ch/lhcathome/result.php?resultid=374548244
https://lhcathome.cern.ch/lhcathome/result.php?resultid=374505104
4) Message boards : ATLAS application : ATLAS vbox v2.03 (Message 47596)
Posted 21 Dec 2022 by [AF>Le_Pommier] Jerome_C2005
Post:
Hi

I got one of these on my iMac but failure (with a long log) and I think nothing is calculating : do you know why ?

2022-12-21 09:15:30 (56109): Guest Log: *** Starting ATLAS job. (PandaID=5698725715 taskID=31572108) ***
2022-12-21 09:25:21 (56109): Guest Log: *** Job finished ***

2022-12-21 09:25:21 (56109): Guest Log: *** Error codes and diagnostics ***
2022-12-21 09:25:21 (56109): Guest Log: "exeErrorCode": 0,
2022-12-21 09:25:21 (56109): Guest Log: "exeErrorDiag": "",
2022-12-21 09:25:21 (56109): Guest Log: "pilotErrorCode": 1305,
2022-12-21 09:25:21 (56109): Guest Log: "pilotErrorDiag": "Failed to execute payload",
2022-12-21 09:25:21 (56109): Guest Log: *** Listing of results directory ***


Thanks.
5) Message boards : ATLAS application : Creation of container failed (Message 45329)
Posted 11 Sep 2021 by [AF>Le_Pommier] Jerome_C2005
Post:
Jesus. The wonderful world of Linux :D

We are quite far from the "initial boinc spirit" here : allow anybody to install, subscribe to a project, it works.

I fully agree it is necessary and great to have people involved in such test (I am a humble one of them), but what's the point of all this if it can't be packaged in a "simple a workable" way for boinc users ?
6) Message boards : ATLAS application : Creation of container failed (Message 44771)
Posted 20 Apr 2021 by [AF>Le_Pommier] Jerome_C2005
Post:
@David : Atlas tasks are not failing anymore, thanks a lof for the tip !
7) Message boards : ATLAS application : Creation of container failed (Message 44761)
Posted 16 Apr 2021 by [AF>Le_Pommier] Jerome_C2005
Post:
I have done this (added a 10 GB swap file) and enabled Atlas again, I'll let you know.
8) Message boards : ATLAS application : Creation of container failed (Message 44756)
Posted 15 Apr 2021 by [AF>Le_Pommier] Jerome_C2005
Post:

[2021-04-15 05:54:39] "exeErrorDiag": "Non-zero return code from EVNTtoHITS (65); Logfile error in log.EVNTtoHITS: \"AthMpEvtLoopMgr FATAL makePool failed for AthMpEvtLoopMgr.SharedEvtQueueProvider\"",


This error usually means that the host ran out of memory. I have seen it often with vbox tasks when the VM was not given enough memory, but not in native tasks. However your host has only 4GB of memory which is kind of on the limit for running ATLAS tasks. It could be the latest batch uses slightly more memory and you reached the limit.

Thanks for the info, so I said "ok never mind let's remove atlas from the list", and then I realize that this machine is set to be on school location, and my school parameters precisely request not to run any Atlas ?? I have the checkbox "if no other work available..." ticked BUT there is always "other work" ?? (there is six-track and native theory selected and I have never seen it with no other tasks / forced to get some Atlas...) so I have untick to see if it changes, but I am surprised.

(the machine is a small linux command line hosted VM and I won't even try to put VB on it, I don't even know if it's possible, and as you said it has very limited resources)
9) Message boards : ATLAS application : Creation of container failed (Message 44749)
Posted 15 Apr 2021 by [AF>Le_Pommier] Jerome_C2005
Post:
The latest task that failed for me first says

[2021-04-15 05:40:32] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/images/singularity/x86_64-centos7.img
[2021-04-15 05:40:32] Checking for singularity binary...
[2021-04-15 05:40:32] Using singularity found in PATH at /usr/local/bin/singularity
[2021-04-15 05:40:32] Running /usr/local/bin/singularity --version
[2021-04-15 05:40:32] singularity version 3.7.2+12-g1eba63670
[2021-04-15 05:40:32] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/images/singularity/x86_64-centos7.img hostname
[2021-04-15 05:40:32] vps-3dca72ac
[2021-04-15 05:40:32] Singularity works
[2021-04-15 05:40:33] Set ATHENA_PROC_NUMBER=2
[2021-04-15 05:40:33] Starting ATLAS job with PandaID=5025257188

and then (15mn after)

[2021-04-15 05:54:39] *** Error codes and diagnostics ***
[2021-04-15 05:54:39] "exeErrorCode": 65,
[2021-04-15 05:54:39] "exeErrorDiag": "Non-zero return code from EVNTtoHITS (65); Logfile error in log.EVNTtoHITS: \"AthMpEvtLoopMgr FATAL makePool failed for AthMpEvtLoopMgr.SharedEvtQueueProvider\"",
[2021-04-15 05:54:39] "pilotErrorCode": 1165,
[2021-04-15 05:54:39] "pilotErrorDiag": "Local output file is missing",
[2021-04-15 05:54:39] *** Listing of results directory ***


Few time before another failed but the error log is completely different, and status is different ("error" when the previous is "validate the error") .[/quote]

Before all this I had no problem with Atlas native.
10) Message boards : ATLAS application : Creation of container failed (Message 44735)
Posted 14 Apr 2021 by [AF>Le_Pommier] Jerome_C2005
Post:
Hi

I have a different error with most of my recent Atlas native tasks, with a very interesting "validate the error" status :

[2021-04-14 02:29:47] *** Error codes and diagnostics ***
[2021-04-14 02:29:47] "exeErrorCode": 65,
[2021-04-14 02:29:47] "exeErrorDiag": "Non-zero return code from EVNTtoHITS (65); Logfile error in log.EVNTtoHITS: \"AthMpEvtLoopMgr FATAL makePool failed for AthMpEvtLoopMgr.SharedEvtQueueProvider\"",
[2021-04-14 02:29:47] "pilotErrorCode": 1165,
[2021-04-14 02:29:47] "pilotErrorDiag": "Local output file is missing",
[2021-04-14 02:29:47] *** Listing of results directory ***

See that one for example.
11) Message boards : Theory Application : Cannot run native theory after debian upgrade (Message 44540)
Posted 23 Mar 2021 by [AF>Le_Pommier] Jerome_C2005
Post:
La victoire est en nous ! It's working for native theory again ! (lhcdev tasks) thanks !

(I had to adapt more versions #)

At start the Atlas native were failing, but in the error message I saw something about "singularity" so it rang me a bell and I found instructions on the forum for installation required for Atlas, I could do the installation steps for "go" and "singularity", hopefully it is working !

All this for boinc love... ;)
12) Message boards : Theory Application : Cannot run native theory after debian upgrade (Message 44534)
Posted 22 Mar 2021 by [AF>Le_Pommier] Jerome_C2005
Post:
Et ben c'était ça !! pas de libssl-dev (j'avais vainement cherché quelle librairie il pouvait bien manquer), il manque toujours un paquet dans un coin avec ce merveilleux système :)

And now it's compiling, compiling, compiling... (on the 2 cores...), I'll see where it went tomorrow, thanks !!!
13) Message boards : Theory Application : Cannot run native theory after debian upgrade (Message 44526)
Posted 21 Mar 2021 by [AF>Le_Pommier] Jerome_C2005
Post:
F6FGZ looking for DX ! HAAAAAALP !!

My poor little debian VM died with OVH disaster, so I installed a new one... with buster... and now I can't redo the same configuration again...

The make -j 2 bindeb-pkg is now failing with a new error :

scripts/kconfig/conf --syncconfig Kconfig
/bin/bash ./scripts/package/mkdebian
dpkg-buildpackage -r"fakeroot -u" -a$(cat debian/arch) -b -nc -uc
dpkg-buildpackage: info: source package linux-4.19.171
dpkg-buildpackage: info: source version 4.19.171-1
dpkg-buildpackage: info: source distribution buster
dpkg-buildpackage: info: source changed by jerome <jerome@vps-3dca72ac.vps.ovh.net>
dpkg-buildpackage: info: host architecture amd64
dpkg-source --before-build .
debian/rules build
make KERNELRELEASE=4.19.171 ARCH=x86 KBUILD_BUILD_VERSION=1 KBUILD_SRC=
DESCEND objtool
HOSTCC scripts/sign-file
scripts/sign-file.c:25:10: fatal error: openssl/opensslv.h: No such file or directory
#include <openssl/opensslv.h>
^~~~~~~~~~~~~~~~~~~~
compilation terminated.
make[4]: *** [scripts/Makefile.host:90: scripts/sign-file] Error 1
make[3]: *** [Makefile:1082: scripts] Error 2
make[3]: *** Waiting for unfinished jobs....
make[2]: *** [debian/rules:4: build] Error 2
dpkg-buildpackage: error: debian/rules build subprocess returned exit status 2
make[1]: *** [scripts/package/Makefile:80: bindeb-pkg] Error 2
make: *** [Makefile:1411: bindeb-pkg] Error 2


Also the version have changed, now I had to use

cp -p /boot/config-4.19.0-14-cloud-amd64 .config

I don't know if it has anything to do...

Thanks !
14) Message boards : Theory Application : Cannot run native theory after debian upgrade (Message 44281)
Posted 7 Feb 2021 by [AF>Le_Pommier] Jerome_C2005
Post:
Pour ceux que ça intéresse j'ai essayé de franciser et synthétiser toutes les étapes sur le forum de l'Alliance Francophone :)

Merci encore F6FGZ qui cherche son DX !
15) Message boards : Theory Application : Cannot run native theory after debian upgrade (Message 44260)
Posted 3 Feb 2021 by [AF>Le_Pommier] Jerome_C2005
Post:
OOOPS so it was really a good idea to ask first !! I don't know what file I did display, but the good one is :

~/KERNEL$ cat /etc/systemd/system/multi-user.target.wants/boinc-client.service
[Unit]
Description=Berkeley Open Infrastructure Network Computing Client
Documentation=man:boinc(1)
After=network-online.target

[Service]
ProtectHome=true
Type=simple
Nice=10
User=boinc
WorkingDirectory=/var/lib/boinc
ExecStart=/usr/bin/boinc
ExecStop=/usr/bin/boinccmd --quit
ExecReload=/usr/bin/boinccmd --read_cc_config
ExecStopPost=/bin/rm -f lockfile
IOSchedulingClass=idle

[Install]
WantedBy=multi-user.target

So this one is pretty similar to yours, but with a few less row, I guess it's ok ?

The rest you mention I had done it already.

I did the grub stuff and rebooted.

~$ find /sys/fs/cgroup/ -type d -name boinc -exec ls -ld {} \;|sort -k9,9
drwxrwxr-x 2 root boinc 0 févr. 3 23:33 /sys/fs/cgroup/blkio/boinc
drwxrwxr-x 2 root boinc 0 févr. 3 23:33 /sys/fs/cgroup/cpu,cpuacct/boinc
drwxrwxr-x 2 root boinc 0 févr. 3 23:33 /sys/fs/cgroup/cpuset/boinc
drwxrwxr-x 2 root boinc 0 févr. 3 23:33 /sys/fs/cgroup/devices/boinc
drwxrwxr-x 2 root boinc 0 févr. 3 23:33 /sys/fs/cgroup/freezer/boinc
drwxrwxr-x 2 root boinc 0 févr. 3 23:33 /sys/fs/cgroup/hugetlb/boinc
drwxrwxr-x 2 root boinc 0 févr. 3 23:33 /sys/fs/cgroup/memory/boinc
drwxrwxr-x 2 root boinc 0 févr. 3 23:33 /sys/fs/cgroup/net_cls,net_prio/boinc
drwxrwxr-x 2 root boinc 0 févr. 3 23:33 /sys/fs/cgroup/perf_event/boinc
drwxrwxr-x 2 root boinc 0 févr. 3 23:33 /sys/fs/cgroup/pids/boinc
~$ sudo grep emulate /var/log/syslog
Feb 3 23:33:01 vps400147 kernel: [ 0.000000] Command line: BOOT_IMAGE=/boot/vmlinuz-4.19.160 root=UUID=de672388-3374-460c-a771-f445373320db ro console=ttyS0 vsyscall=emulate
Feb 3 23:33:01 vps400147 kernel: [ 0.376853] Kernel command line: BOOT_IMAGE=/boot/vmlinuz-4.19.160 root=UUID=de672388-3374-460c-a771-f445373320db ro console=ttyS0 vsyscall=emulate

I don't see the "quiet" in the latest since you told me to remove it, which I did.

So I assume I'm good to go ?

Wait & see, only 2 small tasks from another project to finish and we'll see :)

-----------
EDITH :
i wasn't patient, I killed the poor tasks and got some native tasks, one atlas native from LHC and one theory native from LHCdev and it seems to be running, no crash after several minutes and he log file is filling in the slog !!

IT SEEMS TO BE WORKING ! THANKS A LOT FOR ALL YOUR HELP !

mayge i'll find the courage to summarize all that you had me doing (only the parts that worked :) ) because we have a good linux/libriste community at l'Alliance Francophone forum and they'll certainly be very interested by all his !
16) Message boards : Theory Application : Cannot run native theory after debian upgrade (Message 44257)
Posted 3 Feb 2021 by [AF>Le_Pommier] Jerome_C2005
Post:
Wesh ! le rouge de la honte me monte au nez :)

Though I'm afraid I would never have thought about the 4.19.160 value because it was only coming in the output of some of the commands that "I don't really know what they are doing..." :) and also I hadn't noticed that there were several files 4.19.160 generated by the previous steps !! :)

So obviously the 2 dpkg commands did work, and also the rm (delete ?) command for the source (pretty long).

I don't have VB so I pass the optional step, now I'm at the verification step that you mention :

Verify that the /etc/systemd/system/multi-user.target.wants/boinc-client.service file has not been modified by the update process and looks like :

so you mean I have to *replace* the content of mine =
[Unit]
Description=Automounts filesystems on demand
After=network.target ypbind.service sssd.service network-online.target remote-fs.target
Wants=network-online.target

[Service]
Type=forking
PIDFile=/var/run/autofs.pid
EnvironmentFile=-/etc/default/autofs
ExecStart=/usr/sbin/automount $OPTIONS --pid-file /var/run/autofs.pid
ExecReload=/bin/kill -HUP $MAINPID
TimeoutSec=180

[Install]
WantedBy=multi-user.target

by the one you provide above, right ? (I prefer to ask and look dumber x 2)


And then regarding "2 - Add vsyscall emulation to the kernel boot parameters", the parameter I have in the grub file is

GRUB_CMDLINE_LINUX_DEFAULT="console=ttyS0"

so

Just add vsyscall=emulate to it :
GRUB_CMDLINE_LINUX_DEFAULT="vsyscall=emulate quiet"

does it mean I have to do

GRUB_CMDLINE_LINUX_DEFAULT="console=ttyS0 vsyscall=emulate quiet" ?

(I prefer to ask and look dumber x 3)
17) Message boards : Theory Application : Cannot run native theory after debian upgrade (Message 44249)
Posted 2 Feb 2021 by [AF>Le_Pommier] Jerome_C2005
Post:
It was not easy for me to modify the .config file, but I did it, and the compilation worked :

.../.../...
INSTALL debian/headertmp/usr/include/asm/ (62 files)
dpkg-deb: building package 'linux-headers-4.19.160' in '../linux-headers-4.19.160_4.19.160-1_amd64.deb'.
dpkg-deb: building package 'linux-libc-dev' in '../linux-libc-dev_4.19.160-1_amd64.deb'.
dpkg-deb: building package 'linux-image-4.19.160' in '../linux-image-4.19.160_4.19.160-1_amd64.deb'.
dpkg-deb: building package 'linux-image-4.19.160-dbg' in '../linux-image-4.19.160-dbg_4.19.160-1_amd64.deb'.
dpkg-genbuildinfo --build=binary
dpkg-genchanges --build=binary >../linux-4.19.160_4.19.160-1_amd64.changes
dpkg-genchanges: info: envoi des binaires seulement (le code source n'est pas inclus)
dpkg-source --after-build .
dpkg-buildpackage: info: envoi d'un binaire seulement (aucune inclusion de code source)

But then the next command you have put is failing (I assume I must continue the your initial command list before going to the new ones for "2 - Add vsyscall emulation to the kernel boot parameters"):

~/KERNEL$ sudo dpkg -i linux-headers-4.19.132_4.19.132-1_amd64.deb
dpkg: erreur: cannot access archive 'linux-headers-4.19.132_4.19.132-1_amd64.deb': Aucun fichier ou dossier de ce type

I found this command : apt-cache search linux-headers
It gives me a long list of stuff : is it "one of these" I have to use instead of the one you mention ?
aufs-dkms - fichiers DKMS pour compiler et installer aufs
linux-libc-dev-amd64-cross - Linux Kernel Headers for development (for cross-compiling)
linux-libc-dev-arm64-cross - Linux Kernel Headers for development (for cross-compiling)
linux-libc-dev-armel-cross - Linux Kernel Headers for development (for cross-compiling)
linux-libc-dev-armhf-cross - Linux Kernel Headers for development (for cross-compiling)
linux-libc-dev-i386-cross - Linux Kernel Headers for development (for cross-compiling)
linux-libc-dev-mips-cross - Linux Kernel Headers for development (for cross-compiling)
linux-libc-dev-mips64el-cross - Linux Kernel Headers for development (for cross-compiling)
linux-libc-dev-mipsel-cross - Linux Kernel Headers for development (for cross-compiling)
linux-libc-dev-ppc64el-cross - Linux Kernel Headers for development (for cross-compiling)
linux-libc-dev-s390x-cross - Linux Kernel Headers for development (for cross-compiling)
linux-libc-dev-mips64-cross - Linux Kernel Headers for development (for cross-compiling)
linux-libc-dev-mips64r6-cross - Linux Kernel Headers for development (for cross-compiling)
linux-libc-dev-mips64r6el-cross - Linux Kernel Headers for development (for cross-compiling)
linux-libc-dev-mipsn32-cross - Linux Kernel Headers for development (for cross-compiling)
linux-libc-dev-mipsn32el-cross - Linux Kernel Headers for development (for cross-compiling)
linux-libc-dev-mipsn32r6-cross - Linux Kernel Headers for development (for cross-compiling)
linux-libc-dev-mipsn32r6el-cross - Linux Kernel Headers for development (for cross-compiling)
linux-libc-dev-mipsr6-cross - Linux Kernel Headers for development (for cross-compiling)
linux-libc-dev-mipsr6el-cross - Linux Kernel Headers for development (for cross-compiling)
linux-libc-dev-alpha-cross - Linux Kernel Headers for development (for cross-compiling)
linux-libc-dev-hppa-cross - Linux Kernel Headers for development (for cross-compiling)
linux-libc-dev-m68k-cross - Linux Kernel Headers for development (for cross-compiling)
linux-libc-dev-powerpc-cross - Linux Kernel Headers for development (for cross-compiling)
linux-libc-dev-powerpcspe-cross - Linux Kernel Headers for development (for cross-compiling)
linux-libc-dev-ppc64-cross - Linux Kernel Headers for development (for cross-compiling)
linux-libc-dev-riscv64-cross - Linux Kernel Headers for development (for cross-compiling)
linux-libc-dev-sh4-cross - Linux Kernel Headers for development (for cross-compiling)
linux-libc-dev-sparc64-cross - Linux Kernel Headers for development (for cross-compiling)
linux-libc-dev-x32-cross - Linux Kernel Headers for development (for cross-compiling)
linux-headers-4.19.0-11-all - All header files for Linux 4.19 (meta-package)
linux-headers-4.19.0-11-all-amd64 - All header files for Linux 4.19 (meta-package)
linux-headers-4.19.0-11-amd64 - Header files for Linux 4.19.0-11-amd64
linux-headers-4.19.0-11-cloud-amd64 - Header files for Linux 4.19.0-11-cloud-amd64
linux-headers-4.19.0-11-common - Common header files for Linux 4.19.0-11
linux-headers-4.19.0-11-common-rt - Common header files for Linux 4.19.0-11-rt
linux-headers-4.19.0-11-rt-amd64 - Header files for Linux 4.19.0-11-rt-amd64
linux-headers-4.19.0-13-all - All header files for Linux 4.19 (meta-package)
linux-headers-4.19.0-13-all-amd64 - All header files for Linux 4.19 (meta-package)
linux-headers-4.19.0-13-amd64 - Header files for Linux 4.19.0-13-amd64
linux-headers-4.19.0-13-cloud-amd64 - Header files for Linux 4.19.0-13-cloud-amd64
linux-headers-4.19.0-13-common - Common header files for Linux 4.19.0-13
linux-headers-4.19.0-13-common-rt - Common header files for Linux 4.19.0-13-rt
linux-headers-4.19.0-13-rt-amd64 - Header files for Linux 4.19.0-13-rt-amd64
linux-headers-amd64 - Header files for Linux amd64 configuration (meta-package)
linux-headers-cloud-amd64 - Header files for Linux cloud-amd64 configuration (meta-package)
linux-headers-rt-amd64 - Header files for Linux rt-amd64 configuration (meta-package)
linux-headers-4.19.0-12-all - All header files for Linux 4.19 (meta-package)
linux-headers-4.19.0-12-all-amd64 - All header files for Linux 4.19 (meta-package)
linux-headers-4.19.0-12-amd64 - Header files for Linux 4.19.0-12-amd64
linux-headers-4.19.0-12-cloud-amd64 - Header files for Linux 4.19.0-12-cloud-amd64
linux-headers-4.19.0-12-common - Common header files for Linux 4.19.0-12
linux-headers-4.19.0-12-common-rt - Common header files for Linux 4.19.0-12-rt
linux-headers-4.19.0-12-rt-amd64 - Header files for Linux 4.19.0-12-rt-amd64
linux-headers-4.19.0-6-all - All header files for Linux 4.19 (meta-package)
linux-headers-4.19.0-6-all-amd64 - All header files for Linux 4.19 (meta-package)
linux-headers-4.19.0-6-amd64 - Header files for Linux 4.19.0-6-amd64
linux-headers-4.19.0-6-cloud-amd64 - Header files for Linux 4.19.0-6-cloud-amd64
linux-headers-4.19.0-6-common - Common header files for Linux 4.19.0-6
linux-headers-4.19.0-6-common-rt - Common header files for Linux 4.19.0-6-rt
linux-headers-4.19.0-6-rt-amd64 - Header files for Linux 4.19.0-6-rt-amd64
linux-headers-4.19.0-8-all - All header files for Linux 4.19 (meta-package)
linux-headers-4.19.0-8-all-amd64 - All header files for Linux 4.19 (meta-package)
linux-headers-4.19.0-8-amd64 - Header files for Linux 4.19.0-8-amd64
linux-headers-4.19.0-8-cloud-amd64 - Header files for Linux 4.19.0-8-cloud-amd64
linux-headers-4.19.0-8-common - Common header files for Linux 4.19.0-8
linux-headers-4.19.0-8-common-rt - Common header files for Linux 4.19.0-8-rt
linux-headers-4.19.0-8-rt-amd64 - Header files for Linux 4.19.0-8-rt-amd64
linux-headers-4.19.0-9-all - All header files for Linux 4.19 (meta-package)
linux-headers-4.19.0-9-all-amd64 - All header files for Linux 4.19 (meta-package)
linux-headers-4.19.0-9-amd64 - Header files for Linux 4.19.0-9-amd64
linux-headers-4.19.0-9-cloud-amd64 - Header files for Linux 4.19.0-9-cloud-amd64
linux-headers-4.19.0-9-common - Common header files for Linux 4.19.0-9
linux-headers-4.19.0-9-common-rt - Common header files for Linux 4.19.0-9-rt
linux-headers-4.19.0-9-rt-amd64 - Header files for Linux 4.19.0-9-rt-amd64
linux-headers-5.9.0-0.bpo.5-amd64 - Header files for Linux 5.9.0-0.bpo.5-amd64
linux-headers-5.9.0-0.bpo.5-cloud-amd64 - Header files for Linux 5.9.0-0.bpo.5-cloud-amd64
linux-headers-5.9.0-0.bpo.5-common - Common header files for Linux 5.9.0-0.bpo.5
linux-headers-5.9.0-0.bpo.5-common-rt - Common header files for Linux 5.9.0-0.bpo.5-rt
linux-headers-5.9.0-0.bpo.5-rt-amd64 - Header files for Linux 5.9.0-0.bpo.5-rt-amd64

Sorry for being such a useless newbie with linux and thanks to all your time and help, but it definitively requires to be a linux expert to be able to crunch these bloody native tasks.....
18) Message boards : Theory Application : Cannot run native theory after debian upgrade (Message 44245)
Posted 31 Jan 2021 by [AF>Le_Pommier] Jerome_C2005
Post:
Mmmm after a long time and miles of log, it ended badly :


..../..../..../..../..../..../..../..../..../..../..../..../..../..../..../..../..../..../..../ (= tons of text)
CC arch/x86/xen/mmu.o
CC arch/x86/xen/irq.o
CC arch/x86/xen/time.o
AS arch/x86/xen/xen-asm.o
make[4]: *** Aucune règle pour fabriquer la cible « debian/certs/debian-uefi-certs.pem », nécessaire pour « certs/x509_certificate_list ». Arrêt.
make[3]: *** [Makefile:1064: certs] Error 2
make[3]: *** Attente des tâches non terminées....
AS arch/x86/xen/xen-asm_64.o
CC arch/x86/xen/grant-table.o
CC arch/x86/xen/suspend.o
CC arch/x86/xen/platform-pci-unplug.o
CC arch/x86/xen/enlighten_hvm.o
CC arch/x86/xen/mmu_hvm.o
CC arch/x86/xen/suspend_hvm.o
CC arch/x86/xen/setup.o
CC arch/x86/xen/apic.o
CC arch/x86/xen/pmu.o
CC arch/x86/xen/suspend_pv.o
CC arch/x86/xen/p2m.o
CC arch/x86/xen/enlighten_pv.o
arch/x86/xen/.tmp_enlighten_pv.o: warning: objtool: xen_cpuid()+0x25: can't find jump dest instruction at .text+0x9c
CC arch/x86/xen/mmu_pv.o
CC arch/x86/xen/enlighten_pvh.o
CC arch/x86/xen/trace.o
CC arch/x86/xen/smp.o
CC arch/x86/xen/smp_pv.o
CC arch/x86/xen/smp_hvm.o
CC arch/x86/xen/spinlock.o
CC arch/x86/xen/vga.o
CC arch/x86/xen/pci-swiotlb-xen.o
CC arch/x86/xen/efi.o
AS arch/x86/xen/xen-pvh.o
AR arch/x86/xen/built-in.a
AR arch/x86/built-in.a
make[2]: *** [debian/rules:4: build] Error 2
dpkg-buildpackage: erreur: debian/rules build subprocess returned exit status 2
make[1]: *** [scripts/package/Makefile:80: bindeb-pkg] Error 2
make: *** [Makefile:1408: bindeb-pkg] Error 2
19) Message boards : Theory Application : Cannot run native theory after debian upgrade (Message 44244)
Posted 31 Jan 2021 by [AF>Le_Pommier] Jerome_C2005
Post:
Great for you :) still not ok for me :(

I hadn't understood that fakeroot was a package, so I installed it, then tried the make without the sudo :

~/KERNEL/linux-source-4.19$ make -j 14 bindeb-pkg
scripts/kconfig/conf --syncconfig Kconfig
/bin/bash ./scripts/package/mkdebian
dpkg-buildpackage -r"fakeroot -u" -a$(cat debian/arch) -b -nc -uc
dpkg-buildpackage: info: paquet source linux-4.19.160
dpkg-buildpackage: info: version source 4.19.160-1
dpkg-buildpackage: info: distribution source buster
dpkg-buildpackage: info: source changé par jerome <jerome@vps400147.ovh.net>
dpkg-buildpackage: info: architecture hôte amd64
dpkg-buildpackage: avertissement: debian/rules n'est pas exécutable ; corrigé.
dpkg-source --before-build .
debian/rules build
make KERNELRELEASE=4.19.160 ARCH=x86 KBUILD_BUILD_VERSION=1 KBUILD_SRC=
SYSTBL arch/x86/include/generated/asm/syscalls_32.h
SYSHDR arch/x86/include/generated/asm/unistd_32_ia32.h
SYSHDR arch/x86/include/generated/asm/unistd_64_x32.h
error: Cannot generate ORC metadata for CONFIG_UNWINDER_ORC=y, please install libelf-dev, libelf-devel or elfutils-libelf-devel
SYSTBL arch/x86/include/generated/asm/syscalls_64.h
UPD include/generated/package.h
UPD include/generated/uapi/linux/version.h
WRAP arch/x86/include/generated/uapi/asm/bpf_perf_event.h
HYPERCALLS arch/x86/include/generated/asm/xen-hypercalls.h
SYSHDR arch/x86/include/generated/uapi/asm/unistd_32.h
WRAP arch/x86/include/generated/uapi/asm/poll.h
SYSHDR arch/x86/include/generated/uapi/asm/unistd_64.h
make[3]: *** [Makefile:1144: prepare-objtool] Error 1
make[3]: *** Attente des tâches non terminées....
SYSHDR arch/x86/include/generated/uapi/asm/unistd_x32.h
make[2]: *** [debian/rules:4: build] Error 2
dpkg-buildpackage: erreur: debian/rules build subprocess returned exit status 2
make[1]: *** [scripts/package/Makefile:80: bindeb-pkg] Error 2
make: *** [Makefile:1408: bindeb-pkg] Error 2

"Be aware that option -j number depends of how many cores are available on your computer" : not sure to understand what you mean.

I have 2 cores on this host so I tried with 2 instead of 14 but I have the same error.
--------------------------
OH, I saw that error after posting (I thought the error was at the end)

error: Cannot generate ORC metadata for CONFIG_UNWINDER_ORC=y, please install libelf-dev, libelf-devel or elfutils-libelf-devel

So I installed libelf-dev and now it's running, running, running, running... I'll keep you posted :)

Note that I haven't understood much what you have changed after your messages with Crystal-Pellet, is it

"2 - Add vsyscall emulation to the kernel boot parameters"

what must be done then ?
20) Message boards : Theory Application : Cannot run native theory after debian upgrade (Message 44237)
Posted 30 Jan 2021 by [AF>Le_Pommier] Jerome_C2005
Post:
@F6FGZ : ok cool, so the xcat worked, the cd also, but then the next one if faillling

~/KERNEL/linux-source-4.19$ cp -p /boot/config-4.19.0-10-amd64 .config
cp: impossible d'évaluer '/boot/config-4.19.0-10-amd64': Aucun fichier ou dossier de ce type

-->
/boot$ ls -ahl
-rw-r--r-- 1 root root 202K nov. 28 08:47 config-4.19.0-13-amd64
-rw-r--r-- 1 root root 183K juin 7 2020 config-4.9.0-12-amd64
-rw-r--r-- 1 root root 183K déc. 17 13:51 config-4.9.0-14-amd64

so I don't have a 4.19.0-10, I have 4.19.0-13, so I tried with this one instead, the cp worked (of course, but I don't know if it was a good idea), the diff command worked too, and then the next one didn't :
~/KERNEL/linux-source-4.19$ make oldconfig
HOSTCC scripts/basic/fixdep
HOSTCC scripts/kconfig/conf.o
YACC scripts/kconfig/zconf.tab.c
/bin/sh: 1: bison: not found
make[1]: *** [scripts/Makefile.lib:196: scripts/kconfig/zconf.tab.c] Error 127
make: *** [Makefile:553: oldconfig] Error 2

so having not idea of what it is, I install a "bison" package, then a flex package (new error with missing command), then it worked,
then I could to the "make menuconfig" and select "General setup --> Control Group support ---> [*] HugeTLB controller"

but then problems again
~/KERNEL/linux-source-4.19$ make -j 14 bindeb-pkg
scripts/kconfig/conf --syncconfig Kconfig
UPD include/config/kernel.release
/bin/bash ./scripts/package/mkdebian
dpkg-buildpackage -r"fakeroot -u" -a$(cat debian/arch) -b -nc -uc
dpkg-buildpackage: erreur: fakeroot non trouvé, veuillez soit installer le paquet fakeroot,
soit indiquer une commande avec l'option -r ou exécuter cette
commande en tant qu'administrateur
make[1]: *** [scripts/package/Makefile:80: bindeb-pkg] Error 255
make: *** [Makefile:1408: bindeb-pkg] Error 2

so I tried with sudo
~/KERNEL/linux-source-4.19$ sudo make -j 14 bindeb-pkg
/bin/bash ./scripts/package/mkdebian
dpkg-buildpackage -r"fakeroot -u" -a$(cat debian/arch) -b -nc -uc
dpkg-buildpackage: avertissement: utilisation d'une commande pour obtenir les privilèges administrateur en tant qu'administrateur
dpkg-buildpackage: erreur: commande pour obtenir les privilèges administrateur « fakeroot » non trouvée
make[1]: *** [scripts/package/Makefile:80: bindeb-pkg] Error 2
make: *** [Makefile:1408: bindeb-pkg] Error 2

So here I am, rocking like a hurricane...


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