Message boards :
ATLAS application :
Apptainer error
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Send message Joined: 27 Apr 24 Posts: 17 Credit: 1,107,877 RAC: 1,335 ![]() ![]() ![]() |
I'm trying Atlas native, but getting errors. Can someone diagnose what I have done wrong, and how I should fix it: [2025-05-24 08:21:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2025-05-24 08:21:03] Checking for apptainer binary... [2025-05-24 08:21:03] Using apptainer found in PATH at /usr/bin/apptainer [2025-05-24 08:21:03] Running /usr/bin/apptainer --version [2025-05-24 08:21:04] apptainer version 1.3.4 [2025-05-24 08:21:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2025-05-24 08:21:05] apptainer isnt working: #[91mERROR : Could not write info to setgroups: Permission denied [2025-05-24 08:21:05] #[0m#[91mERROR : Error while waiting event for user namespace mappings: no event received [2025-05-24 08:21:05] #[0m 08:31:06 (589891): run_atlas exited; CPU time 0.212494 08:31:06 (589891): app exit status: 0x1 08:31:06 (589891): called boinc_finish(195) |
![]() Send message Joined: 16 May 15 Posts: 2 Credit: 37,533,993 RAC: 82,329 ![]() ![]() ![]() |
You asked the same question one year before: https://lhcathome.cern.ch/lhcathome/forum_thread.php?id=5905&postid=50249 And the answer is: https://lhcathome.cern.ch/lhcathome/forum_thread.php?id=5905&postid=50253 It worked for me, too. |
Send message Joined: 27 Apr 24 Posts: 17 Credit: 1,107,877 RAC: 1,335 ![]() ![]() ![]() |
You are correct that I experienced the same problem on a previous Ubuntu setup, however I didn't remember it. I have implemented the workaround, and now my Atlas_native workunit is running correctly now. |
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