Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
05:10:41 (18275): wrapper (7.7.26015): starting
05:10:41 (18275): wrapper: running run_atlas (--nthreads 4)
[2026-04-28 05:10:41] Arguments: --nthreads 4
[2026-04-28 05:10:41] Threads: 4
[2026-04-28 05:10:41] Checking for CVMFS
[2026-04-28 05:10:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-28 05:10:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-28 05:10:53] Running cvmfs_config stat atlas.cern.ch
[2026-04-28 05:10:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-28 05:10:53] 2.11.5.0 18497 0 23576 158953 3 1 3905160 4194305 0 130560 0 0 0.000 1282 1815 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2026-04-28 05:10:53] CVMFS is ok
[2026-04-28 05:10:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-28 05:10:53] Checking for apptainer binary...
[2026-04-28 05:10:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-28 05:10:53] Running /usr/bin/apptainer --version
[2026-04-28 05:10:53] apptainer version 1.0.3
[2026-04-28 05:10:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-28 05:10:53] TeeC23
[2026-04-28 05:10:53] apptainer works
[2026-04-28 05:10:53] Set ATHENA_PROC_NUMBER=4
[2026-04-28 05:10:53] Set ATHENA_CORE_NUMBER=4
[2026-04-28 05:10:53] Starting ATLAS job with PandaID=7116341980
[2026-04-28 05:10:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-28 09:23:45]  *** The last 200 lines of the pilot log: ***
[2026-04-28 09:23:45] 2026-04-28 08:22:36,060 | INFO     |  -- lfn=log.49863869._001390.job.log.tgz.1, status_code=0, status=transferred
[2026-04-28 09:23:45] 2026-04-28 08:22:36,060 | INFO     | stage-out finished correctly
[2026-04-28 09:23:45] 2026-04-28 08:22:36,100 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-28 09:23:45] 2026-04-28 08:22:37,455 | INFO     | monitor loop #1149: job 0:7116341980 is in state 'finished'
[2026-04-28 09:23:45] 2026-04-28 08:22:37,456 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-28 09:23:45] 2026-04-28 08:22:38,368 | INFO     | job 7116341980 has state=finished
[2026-04-28 09:23:45] 2026-04-28 08:22:38,369 | INFO     | preparing for final server update for job 7116341980 in state='finished'
[2026-04-28 09:23:45] 2026-04-28 08:22:38,369 | INFO     | reading metadata from: /home/m/BOINC/slots/0/PanDA_Pilot-7116341980/jobReport.json
[2026-04-28 09:23:45] 2026-04-28 08:22:38,374 | INFO     | added worker_node to metadata from /home/m/BOINC/slots/0/workernode_map.json
[2026-04-28 09:23:45] 2026-04-28 08:22:38,374 | INFO     | this job has now completed (state=finished)
[2026-04-28 09:23:45] 2026-04-28 08:22:38,375 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-28 09:23:45] 2026-04-28 08:22:38,375 | INFO     | log transfer has been attempted: DONE
[2026-04-28 09:23:45] 2026-04-28 08:22:38,375 | INFO     | job 7116341980 has finished - writing final server update
[2026-04-28 09:23:45] 2026-04-28 08:22:38,376 | INFO     | total number of processed events: 400 (read)
[2026-04-28 09:23:45] 2026-04-28 08:22:38,398 | INFO     | using path: /home/m/BOINC/slots/0/PanDA_Pilot-7116341980/memory_monitor_summary.json (trf name=prmon)
[2026-04-28 09:23:45] 2026-04-28 08:22:38,398 | INFO     | extracted standard info from prmon json
[2026-04-28 09:23:45] 2026-04-28 08:22:38,398 | INFO     | extracted standard memory fields from prmon json
[2026-04-28 09:23:45] 2026-04-28 08:22:38,399 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-28 09:23:45] 2026-04-28 08:22:38,399 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-28 09:23:45] 2026-04-28 08:22:38,403 | INFO     | fitting pss+swap vs Time
[2026-04-28 09:23:45] 2026-04-28 08:22:38,403 | INFO     | sum of square deviations: 4672638308.0
[2026-04-28 09:23:45] 2026-04-28 08:22:38,405 | INFO     | sum of deviations: -272372137.0000013
[2026-04-28 09:23:45] 2026-04-28 08:22:38,405 | INFO     | mean x (centered): 0.0
[2026-04-28 09:23:45] 2026-04-28 08:22:38,405 | INFO     | mean y: 2379124.3684210526
[2026-04-28 09:23:45] 2026-04-28 08:22:38,405 | INFO     | intersect: 2379124.3684210526
[2026-04-28 09:23:45] 2026-04-28 08:22:38,405 | INFO     | chi2: 1.616341964627698
[2026-04-28 09:23:45] 2026-04-28 08:22:38,405 | INFO     | sum of square deviations: 4394577280.5
[2026-04-28 09:23:45] 2026-04-28 08:22:38,406 | INFO     | sum of deviations: -107657557.99999756
[2026-04-28 09:23:45] 2026-04-28 08:22:38,406 | INFO     | mean x (centered): 0.0
[2026-04-28 09:23:45] 2026-04-28 08:22:38,406 | INFO     | mean y: 2379214.727272727
[2026-04-28 09:23:45] 2026-04-28 08:22:38,406 | INFO     | intersect: 2379214.727272727
[2026-04-28 09:23:45] 2026-04-28 08:22:38,407 | INFO     | chi2: 1.6165425694412006
[2026-04-28 09:23:45] 2026-04-28 08:22:38,407 | INFO     | current chi2=1.6165425694412006 (change=-0.012411037880143036 %)
[2026-04-28 09:23:45] 2026-04-28 08:22:38,407 | INFO     | right removable region: 241
[2026-04-28 09:23:45] 2026-04-28 08:22:38,407 | INFO     | sum of square deviations: 4394577280.5
[2026-04-28 09:23:45] 2026-04-28 08:22:38,408 | INFO     | sum of deviations: -39697760285.50001
[2026-04-28 09:23:45] 2026-04-28 08:22:38,408 | INFO     | mean x (centered): 0.0
[2026-04-28 09:23:45] 2026-04-28 08:22:38,408 | INFO     | mean y: 2400583.7892561983
[2026-04-28 09:23:45] 2026-04-28 08:22:38,408 | INFO     | intersect: 2400583.7892561983
[2026-04-28 09:23:45] 2026-04-28 08:22:38,408 | INFO     | chi2: 0.06257893243012046
[2026-04-28 09:23:45] 2026-04-28 08:22:38,408 | INFO     | current chi2=0.06257893243012046 (change=96.12836059450237 %)
[2026-04-28 09:23:45] 2026-04-28 08:22:38,408 | INFO     | sum of square deviations: 4127772278.0
[2026-04-28 09:23:45] 2026-04-28 08:22:38,409 | INFO     | sum of deviations: -37681574225.0
[2026-04-28 09:23:45] 2026-04-28 08:22:38,409 | INFO     | mean x (centered): 0.0
[2026-04-28 09:23:45] 2026-04-28 08:22:38,409 | INFO     | mean y: 2399428.464135021
[2026-04-28 09:23:45] 2026-04-28 08:22:38,409 | INFO     | intersect: 2399428.464135021
[2026-04-28 09:23:45] 2026-04-28 08:22:38,410 | INFO     | chi2: 0.06236070346042687
[2026-04-28 09:23:45] 2026-04-28 08:22:38,410 | INFO     | current chi2=0.06236070346042687 (change=0.3487259389368431 %)
[2026-04-28 09:23:45] 2026-04-28 08:22:38,410 | INFO     | left removable region: 10
[2026-04-28 09:23:45] 2026-04-28 08:22:38,410 | INFO     | sum of square deviations: 3822136780.0
[2026-04-28 09:23:45] 2026-04-28 08:22:38,411 | INFO     | sum of deviations: -36609071188.0
[2026-04-28 09:23:45] 2026-04-28 08:22:38,411 | INFO     | mean x (centered): 0.0
[2026-04-28 09:23:45] 2026-04-28 08:22:38,411 | INFO     | mean y: 2400070.8051948054
[2026-04-28 09:23:45] 2026-04-28 08:22:38,411 | INFO     | intersect: 2400070.8051948054
[2026-04-28 09:23:45] 2026-04-28 08:22:38,411 | INFO     | chi2: 0.06056157668321827
[2026-04-28 09:23:45] 2026-04-28 08:22:38,411 | INFO     | current memory leak: -9.58 B/s (using 231 data points, chi2=0.06)
[2026-04-28 09:23:45] 2026-04-28 08:22:38,411 | INFO     | could have reported an average CPU frequency of 3322 MHz (12 samples)
[2026-04-28 09:23:45] 2026-04-28 08:22:38,412 | INFO     | ..............................
[2026-04-28 09:23:45] 2026-04-28 08:22:38,412 | INFO     | . Timing measurements:
[2026-04-28 09:23:45] 2026-04-28 08:22:38,412 | INFO     | . get job = 0 s
[2026-04-28 09:23:45] 2026-04-28 08:22:38,412 | INFO     | . initial setup = 13 s
[2026-04-28 09:23:45] 2026-04-28 08:22:38,412 | INFO     | . payload setup = 3 s
[2026-04-28 09:23:45] 2026-04-28 08:22:38,412 | INFO     | . stage-in = 0 s
[2026-04-28 09:23:45] 2026-04-28 08:22:38,412 | INFO     | . payload execution = 15055 s
[2026-04-28 09:23:45] 2026-04-28 08:22:38,412 | INFO     | . stage-out = 6 s
[2026-04-28 09:23:45] 2026-04-28 08:22:38,412 | INFO     | . log creation = 0 s
[2026-04-28 09:23:45] 2026-04-28 08:22:38,412 | INFO     | ..............................
[2026-04-28 09:23:45] 2026-04-28 08:22:38,450 | INFO     | 
[2026-04-28 09:23:45] 2026-04-28 08:22:38,451 | INFO     | job summary report
[2026-04-28 09:23:45] 2026-04-28 08:22:38,451 | INFO     | --------------------------------------------------
[2026-04-28 09:23:45] 2026-04-28 08:22:38,451 | INFO     | PanDA job id: 7116341980
[2026-04-28 09:23:45] 2026-04-28 08:22:38,451 | INFO     | task id: 49863869
[2026-04-28 09:23:45] 2026-04-28 08:22:38,451 | INFO     | errors: (none)
[2026-04-28 09:23:45] 2026-04-28 08:22:38,451 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-28 09:23:45] 2026-04-28 08:22:38,451 | INFO     | pilot state: finished 
[2026-04-28 09:23:45] 2026-04-28 08:22:38,451 | INFO     | transexitcode: 0
[2026-04-28 09:23:45] 2026-04-28 08:22:38,451 | INFO     | exeerrorcode: 0
[2026-04-28 09:23:45] 2026-04-28 08:22:38,451 | INFO     | exeerrordiag: 
[2026-04-28 09:23:45] 2026-04-28 08:22:38,451 | INFO     | exitcode: 0
[2026-04-28 09:23:45] 2026-04-28 08:22:38,451 | INFO     | exitmsg: OK
[2026-04-28 09:23:45] 2026-04-28 08:22:38,451 | INFO     | cpuconsumptiontime: 58573 s
[2026-04-28 09:23:45] 2026-04-28 08:22:38,451 | INFO     | nevents: 400
[2026-04-28 09:23:45] 2026-04-28 08:22:38,451 | INFO     | neventsw: 0
[2026-04-28 09:23:45] 2026-04-28 08:22:38,451 | INFO     | pid: 26967
[2026-04-28 09:23:45] 2026-04-28 08:22:38,451 | INFO     | pgrp: 26967
[2026-04-28 09:23:45] 2026-04-28 08:22:38,451 | INFO     | corecount: 4
[2026-04-28 09:23:45] 2026-04-28 08:22:38,451 | INFO     | event service: False
[2026-04-28 09:23:45] 2026-04-28 08:22:38,451 | INFO     | sizes: {0: 2282461, 11: 2282461, 15062: 2313730, 15070: 2322782, 15072: 2322920}
[2026-04-28 09:23:45] 2026-04-28 08:22:38,451 | INFO     | --------------------------------------------------
[2026-04-28 09:23:45] 2026-04-28 08:22:38,452 | INFO     | 
[2026-04-28 09:23:45] 2026-04-28 08:22:38,452 | INFO     | executing command: ls -lF /home/m/BOINC/slots/0
[2026-04-28 09:23:45] 2026-04-28 08:22:38,458 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-28 09:23:45] 2026-04-28 08:22:38,459 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-28 09:23:45] 2026-04-28 08:22:38,459 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-28 09:23:45] 2026-04-28 08:22:38,459 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-28 09:23:45] 2026-04-28 08:22:38,459 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-28 09:23:45] 2026-04-28 08:22:38,459 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-28 09:23:45] 2026-04-28 08:22:38,459 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-28 09:23:45] 2026-04-28 08:22:38,459 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-28 09:23:45] 2026-04-28 08:22:38,459 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-28 09:23:45] 2026-04-28 08:22:38,459 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-28 09:23:45] 2026-04-28 08:22:38,459 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-28 09:23:45] 2026-04-28 08:22:38,459 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-28 09:23:45] 2026-04-28 08:22:38,459 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-28 09:23:45] 2026-04-28 08:22:38,459 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-28 09:23:45] 2026-04-28 08:22:38,459 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-28 09:23:45] 2026-04-28 08:22:38,459 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-28 09:23:45] 2026-04-28 08:22:38,459 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-28 09:23:45] 2026-04-28 08:22:38,459 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-28 09:23:45] 2026-04-28 08:22:38,459 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-28 09:23:45] 2026-04-28 08:22:38,459 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-28 09:23:45] 2026-04-28 08:22:38,459 | INFO     | job 7116341980 has completed (purged errors)
[2026-04-28 09:23:45] 2026-04-28 08:22:38,460 | INFO     | overall cleanup function is called
[2026-04-28 09:23:45] 2026-04-28 08:22:39,466 | INFO     | --- collectZombieJob: --- 10, [26967]
[2026-04-28 09:23:45] 2026-04-28 08:22:39,466 | INFO     | zombie collector waiting for pid 26967
[2026-04-28 09:23:45] 2026-04-28 08:22:39,466 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-28 09:23:45] 2026-04-28 08:22:39,466 | INFO     | collected zombie processes
[2026-04-28 09:23:45] 2026-04-28 08:22:39,467 | INFO     | will attempt to kill all subprocesses of pid=26967
[2026-04-28 09:23:45] 2026-04-28 08:22:39,506 | INFO     | process IDs to be killed: [26967] (in reverse order)
[2026-04-28 09:23:45] 2026-04-28 08:22:39,525 | WARNING  | found no corresponding commands to process id(s)
[2026-04-28 09:23:45] 2026-04-28 08:22:39,525 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-28 09:23:45] 2026-04-28 08:22:39,526 | INFO     | did not find any defunct processes belonging to 26967
[2026-04-28 09:23:45] 2026-04-28 08:22:39,527 | INFO     | did not find any defunct processes belonging to 26967
[2026-04-28 09:23:45] 2026-04-28 08:22:39,527 | INFO     | Ready for new job
[2026-04-28 09:23:45] 2026-04-28 08:22:39,528 | INFO     | ***************************************
[2026-04-28 09:23:45] 2026-04-28 08:22:39,528 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-28 09:23:45] 2026-04-28 08:22:39,528 | INFO     | ***************************************
[2026-04-28 09:23:45] 2026-04-28 08:22:39,528 | INFO     | 
[2026-04-28 09:23:45] 2026-04-28 08:22:39,545 | INFO     | architecture information:
[2026-04-28 09:23:45] 2026-04-28 08:22:39,545 | INFO     | executing command: cat /etc/os-release
[2026-04-28 09:23:45] 2026-04-28 08:22:39,554 | INFO     | cat /etc/os-release:
[2026-04-28 09:23:45] NAME="CentOS Linux"
[2026-04-28 09:23:45] VERSION="7 (Core)"
[2026-04-28 09:23:45] ID="centos"
[2026-04-28 09:23:45] ID_LIKE="rhel fedora"
[2026-04-28 09:23:45] VERSION_ID="7"
[2026-04-28 09:23:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-28 09:23:45] ANSI_COLOR="0;31"
[2026-04-28 09:23:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-28 09:23:45] HOME_URL="https://www.centos.org/"
[2026-04-28 09:23:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-28 09:23:45] 
[2026-04-28 09:23:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-28 09:23:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-28 09:23:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-28 09:23:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-28 09:23:45] 
[2026-04-28 09:23:45] 2026-04-28 08:22:39,555 | INFO     | ***************************************
[2026-04-28 09:23:45] 2026-04-28 08:22:40,058 | INFO     | executing command: df -mP /home/m/BOINC/slots/0
[2026-04-28 09:23:45] 2026-04-28 08:22:40,071 | INFO     | sufficient remaining disk space (413208150016 B)
[2026-04-28 09:23:45] 2026-04-28 08:22:40,071 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-28 09:23:45] 2026-04-28 08:22:40,071 | INFO     | current server update state: UPDATING_FINAL
[2026-04-28 09:23:45] 2026-04-28 08:22:40,071 | INFO     | update_server=False
[2026-04-28 09:23:45] 2026-04-28 08:22:40,071 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-28 09:23:45] 2026-04-28 08:22:40,071 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-28 09:23:45] 2026-04-28 08:22:40,072 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-28 09:23:45] 2026-04-28 08:22:40,448 | INFO     | all payload control threads have been joined
[2026-04-28 09:23:45] 2026-04-28 08:22:40,964 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-28 09:23:45] 2026-04-28 08:22:40,965 | INFO     | aborting loop
[2026-04-28 09:23:45] 2026-04-28 08:22:41,058 | INFO     | all data control threads have been joined
[2026-04-28 09:23:45] 2026-04-28 08:22:41,063 | INFO     | all job control threads have been joined
[2026-04-28 09:23:45] 2026-04-28 08:22:41,073 | INFO     | [job] retrieve thread has finished
[2026-04-28 09:23:45] 2026-04-28 08:22:41,077 | INFO     | [job] queue monitor thread has finished
[2026-04-28 09:23:45] 2026-04-28 08:22:41,329 | INFO     | [job] create_data_payload thread has finished
[2026-04-28 09:23:45] 2026-04-28 08:22:41,329 | INFO     | [job] validate thread has finished
[2026-04-28 09:23:45] 2026-04-28 08:22:41,329 | INFO     | [data] copytool_in thread has finished
[2026-04-28 09:23:45] 2026-04-28 08:22:41,349 | INFO     | [payload] execute_payloads thread has finished
[2026-04-28 09:23:45] 2026-04-28 08:22:41,420 | INFO     | [payload] validate_pre thread has finished
[2026-04-28 09:23:45] 2026-04-28 08:22:41,454 | INFO     | [payload] control thread has finished
[2026-04-28 09:23:45] 2026-04-28 08:22:41,547 | INFO     | [payload] failed_post thread has finished
[2026-04-28 09:23:45] 2026-04-28 08:22:41,682 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-28 09:23:45] 2026-04-28 08:22:41,970 | INFO     | [job] job monitor thread has finished
[2026-04-28 09:23:45] 2026-04-28 08:22:42,063 | INFO     | [data] control thread has finished
[2026-04-28 09:23:45] 2026-04-28 08:22:42,068 | INFO     | [job] control thread has finished
[2026-04-28 09:23:45] 2026-04-28 08:22:42,077 | INFO     | [data] copytool_out thread has finished
[2026-04-28 09:23:45] 2026-04-28 08:22:42,144 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-28 09:23:45] 2026-04-28 08:22:42,179 | INFO     | [payload] validate_post thread has finished
[2026-04-28 09:23:45] 2026-04-28 08:22:46,150 | INFO     | [data] queue_monitor thread has finished
[2026-04-28 09:23:45] 2026-04-28 08:23:10,950 | INFO     | PID=22588 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-28 09:23:45] 2026-04-28 08:23:10,950 | INFO     | found 0 job(s) in 20 queues
[2026-04-28 09:23:45] 2026-04-28 08:23:10,950 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-28 09:23:45] 2026-04-28 08:23:10,950 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-28 09:23:45] 2026-04-28 08:23:39,450 | INFO     | [monitor] cgroup control has ended
[2026-04-28 09:23:45] 2026-04-28 08:23:40,652 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140482054428480)>', '<ExcThread(monitor, started 140481325426432)>']
[2026-04-28 09:23:45] 2026-04-28 08:23:41,103 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-28 09:23:45] 2026-04-28 08:23:41,104 | INFO     | [monitor] control thread has ended
[2026-04-28 09:23:45] 2026-04-28 08:23:45,677 | INFO     | all workflow threads have been joined
[2026-04-28 09:23:45] 2026-04-28 08:23:45,678 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-28 09:23:45] 2026-04-28 08:23:45,678 | INFO     | traces error code: 0
[2026-04-28 09:23:45] 2026-04-28 08:23:45,678 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-28 09:23:45] 2026-04-28 08:23:45,754 [wrapper] ==== pilot stdout END ====
[2026-04-28 09:23:45] 2026-04-28 08:23:45,755 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-28 09:23:45] 2026-04-28 08:23:45,756 [wrapper] pilotpid: 22588
[2026-04-28 09:23:45] 2026-04-28 08:23:45,757 [wrapper] Pilot exit status: 0
[2026-04-28 09:23:45] 2026-04-28 08:23:45,762 [wrapper] pandaids: 7116341980
[2026-04-28 09:23:45] 2026-04-28 08:23:45,774 [wrapper] cleanup supervisor_pilot  1438 22589
[2026-04-28 09:23:45] 2026-04-28 08:23:45,775 [wrapper] Test setup, not cleaning
[2026-04-28 09:23:45] 2026-04-28 08:23:45,777 [wrapper] apfmon messages muted
[2026-04-28 09:23:45] 2026-04-28 08:23:45,778 [wrapper] ==== wrapper stdout END ====
[2026-04-28 09:23:45] 2026-04-28 08:23:45,779 [wrapper] ==== wrapper stderr END ====
[2026-04-28 09:23:45]  *** Error codes and diagnostics ***
[2026-04-28 09:23:45]     "exeErrorCode": 0,
[2026-04-28 09:23:45]     "pilotErrorCode": 0,
[2026-04-28 09:23:45]  *** Listing of results directory ***
[2026-04-28 09:23:45] total 462144
[2026-04-28 09:23:45] -rw-r--r-- 1 m m    683926 Apr 28 01:34 pilot3.tar.gz
[2026-04-28 09:23:45] -rwx------ 1 m m     36322 Apr 28 01:38 runpilot2-wrapper.sh
[2026-04-28 09:23:45] -rw-r--r-- 1 m m      5631 Apr 28 01:40 queuedata.json
[2026-04-28 09:23:45] -rw-rw-r-- 1 m m       100 Apr 28 05:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-28 09:23:45] -rwxr-xr-x 1 m m      7986 Apr 28 05:10 run_atlas
[2026-04-28 09:23:45] -rw-rw-r-- 1 m m       105 Apr 28 05:10 job.xml
[2026-04-28 09:23:45] -rw-r--r-- 2 m m     15667 Apr 28 05:10 start_atlas.sh
[2026-04-28 09:23:45] drwxrwx--x 2 m m      4096 Apr 28 05:10 shared
[2026-04-28 09:23:45] -rw-r--r-- 2 m m    697410 Apr 28 05:10 input.tar.gz
[2026-04-28 09:23:45] -rw-rw-r-- 1 m m      5795 Apr 28 05:10 init_data.xml
[2026-04-28 09:23:45] -rw-r--r-- 2 m m 255622829 Apr 28 05:10 EVNT.49863867._000056.pool.root.1
[2026-04-28 09:23:45] -rw-rw-r-- 1 m m         0 Apr 28 05:10 boinc_lockfile
[2026-04-28 09:23:45] -rw-rw-r-- 1 m m      2574 Apr 28 05:10 pandaJob.out
[2026-04-28 09:23:45] -rw------- 1 m m    996684 Apr 28 05:11 agis_schedconf.cvmfs.json
[2026-04-28 09:23:45] -rw------- 1 m m       424 Apr 28 05:11 workernode_map.json
[2026-04-28 09:23:45] drwx------ 5 m m      4096 Apr 28 05:11 pilot3
[2026-04-28 09:23:45] -rw------- 1 m m 210050861 Apr 28 09:22 HITS.49863869._001390.pool.root.1
[2026-04-28 09:23:45] -rw-rw-r-- 1 m m       488 Apr 28 09:22 boinc_task_state.xml
[2026-04-28 09:23:45] -rw------- 1 m m      1033 Apr 28 09:22 memory_monitor_summary.json
[2026-04-28 09:23:45] -rw------- 1 m m   1512704 Apr 28 09:22 agis_ddmendpoints.agis.ALL.json
[2026-04-28 09:23:45] -rw------- 1 m m    340199 Apr 28 09:22 log.49863869._001390.job.log.tgz.1
[2026-04-28 09:23:45] -rw------- 1 m m      6359 Apr 28 09:22 heartbeat_new.json
[2026-04-28 09:23:45] -rw------- 1 m m      6250 Apr 28 09:22 heartbeat.json
[2026-04-28 09:23:45] -rw------- 1 m m        95 Apr 28 09:22 pilot_heartbeat.json
[2026-04-28 09:23:45] -rw-rw-r-- 1 m m        28 Apr 28 09:23 wrapper_checkpoint.txt
[2026-04-28 09:23:45] -rw-rw-r-- 1 m m      8192 Apr 28 09:23 boinc_mmap_file
[2026-04-28 09:23:45] -rw------- 1 m m      4745 Apr 28 09:23 pilotlog.txt
[2026-04-28 09:23:45] -rw------- 1 m m   1375900 Apr 28 09:23 log.49863869._001390.job.log.1
[2026-04-28 09:23:45] -rw------- 1 m m       357 Apr 28 09:23 output.list
[2026-04-28 09:23:45] -rw-rw-r-- 1 m m       410 Apr 28 09:23 runtime_log
[2026-04-28 09:23:45] -rw------- 1 m m   1730560 Apr 28 09:23 result.tar.gz
[2026-04-28 09:23:45] -rw-rw-r-- 1 m m      8352 Apr 28 09:23 runtime_log.err
[2026-04-28 09:23:45] -rw------- 1 m m       645 Apr 28 09:23 0190c714c421.diag
[2026-04-28 09:23:45] -rw-rw-r-- 1 m m     20847 Apr 28 09:23 stderr.txt
[2026-04-28 09:23:45] HITS file was successfully produced:
[2026-04-28 09:23:45] -rw------- 1 m m 210050861 Apr 28 09:22 shared/HITS.pool.root.1
[2026-04-28 09:23:45]  *** Contents of shared directory: ***
[2026-04-28 09:23:45] total 457156
[2026-04-28 09:23:45] -rw-r--r-- 2 m m     15667 Apr 28 05:10 start_atlas.sh
[2026-04-28 09:23:45] -rw-r--r-- 2 m m    697410 Apr 28 05:10 input.tar.gz
[2026-04-28 09:23:45] -rw-r--r-- 2 m m 255622829 Apr 28 05:10 ATLAS.root_0
[2026-04-28 09:23:45] -rw------- 1 m m 210050861 Apr 28 09:22 HITS.pool.root.1
[2026-04-28 09:23:45] -rw------- 1 m m   1730560 Apr 28 09:23 result.tar.gz
09:23:47 (18275): run_atlas exited; CPU time 58720.083357
09:23:47 (18275): called boinc_finish(0)

</stderr_txt>
]]>

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