Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
11:18:20 (906944): wrapper (7.7.26015): starting
11:18:20 (906944): wrapper: running run_atlas (--nthreads 4)
[2026-03-11 11:18:20] Arguments: --nthreads 4
[2026-03-11 11:18:20] Threads: 4
[2026-03-11 11:18:20] Checking for CVMFS
[2026-03-11 11:18:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 11:18:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 11:18:21] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 11:18:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 11:18:21] 2.13.3.0 1760492 7523 50964 157158 0 50 3595502 4096001 1832 130560 0 5997613 99.991 265290 833 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-11 11:18:21] CVMFS is ok
[2026-03-11 11:18:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 11:18:21] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-11 11:18:21] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-11 11:18:21] Further information can be found at the LHC@home message board.
[2026-03-11 11:18:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 11:18:21] Checking for apptainer binary...
[2026-03-11 11:18:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 11:18:21] Running /usr/bin/apptainer --version
[2026-03-11 11:18:21] apptainer version 1.4.5
[2026-03-11 11:18:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 11:18:22] OptiPlex7070-Ubuntu
[2026-03-11 11:18:22] apptainer works
[2026-03-11 11:18:22] Set ATHENA_PROC_NUMBER=4
[2026-03-11 11:18:22] Set ATHENA_CORE_NUMBER=4
[2026-03-11 11:18:22] Starting ATLAS job with PandaID=7049740071
[2026-03-11 11:18:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 14:15:00]  *** The last 200 lines of the pilot log: ***
[2026-03-11 14:15:00] 2026-03-11 18:14:17,995 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-11 14:15:00] 2026-03-11 18:14:17,995 | INFO     | log transfer has been attempted: DONE
[2026-03-11 14:15:00] 2026-03-11 18:14:17,995 | INFO     | job 7049740071 has finished - writing final server update
[2026-03-11 14:15:00] 2026-03-11 18:14:17,995 | INFO     | total number of processed events: 400 (read)
[2026-03-11 14:15:00] 2026-03-11 18:14:17,997 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/2/PanDA_Pilot-7049740071/memory_monitor_summary.json (trf name=prmon)
[2026-03-11 14:15:00] 2026-03-11 18:14:17,997 | INFO     | extracted standard info from prmon json
[2026-03-11 14:15:00] 2026-03-11 18:14:17,997 | INFO     | extracted standard memory fields from prmon json
[2026-03-11 14:15:00] 2026-03-11 18:14:17,997 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-11 14:15:00] 2026-03-11 18:14:17,997 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-11 14:15:00] 2026-03-11 18:14:17,997 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-11 14:15:00] 2026-03-11 18:14:17,999 | INFO     | fitting pss+swap vs Time
[2026-03-11 14:15:00] 2026-03-11 18:14:17,999 | INFO     | sum of square deviations: 1605470102.0
[2026-03-11 14:15:00] 2026-03-11 18:14:17,999 | INFO     | sum of deviations: -47882854691.0
[2026-03-11 14:15:00] 2026-03-11 18:14:17,999 | INFO     | mean x: 1773247581.0
[2026-03-11 14:15:00] 2026-03-11 18:14:17,999 | INFO     | mean y: 2439818.8150289017
[2026-03-11 14:15:00] 2026-03-11 18:14:17,999 | INFO     | intersect: 52889227399.858536
[2026-03-11 14:15:00] 2026-03-11 18:14:18,000 | INFO     | chi2: 1.5977120362334707
[2026-03-11 14:15:00] 2026-03-11 18:14:18,000 | INFO     | sum of square deviations: 1470248962.0
[2026-03-11 14:15:00] 2026-03-11 18:14:18,000 | INFO     | sum of deviations: -45716533478.50003
[2026-03-11 14:15:00] 2026-03-11 18:14:18,000 | INFO     | mean x: 1773247428.5
[2026-03-11 14:15:00] 2026-03-11 18:14:18,000 | INFO     | mean y: 2442261.5416666665
[2026-03-11 14:15:00] 2026-03-11 18:14:18,000 | INFO     | intersect: 55140536234.69309
[2026-03-11 14:15:00] 2026-03-11 18:14:18,000 | INFO     | chi2: 1.5882032250160678
[2026-03-11 14:15:00] 2026-03-11 18:14:18,001 | INFO     | current chi2=1.5882032250160678 (change=0.5951517546190267 %)
[2026-03-11 14:15:00] 2026-03-11 18:14:18,001 | INFO     | right removable region: 167
[2026-03-11 14:15:00] 2026-03-11 18:14:18,001 | INFO     | sum of square deviations: 1470248962.0
[2026-03-11 14:15:00] 2026-03-11 18:14:18,001 | INFO     | sum of deviations: -66566997921.000015
[2026-03-11 14:15:00] 2026-03-11 18:14:18,001 | INFO     | mean x: 1773247733.5
[2026-03-11 14:15:00] 2026-03-11 18:14:18,001 | INFO     | mean y: 2460473.6428571427
[2026-03-11 14:15:00] 2026-03-11 18:14:18,001 | INFO     | intersect: 80288031992.59251
[2026-03-11 14:15:00] 2026-03-11 18:14:18,002 | INFO     | chi2: 0.31009539206434844
[2026-03-11 14:15:00] 2026-03-11 18:14:18,002 | INFO     | current chi2=0.31009539206434844 (change=80.59128397158581 %)
[2026-03-11 14:15:00] 2026-03-11 18:14:18,002 | INFO     | sum of square deviations: 1342841922.0
[2026-03-11 14:15:00] 2026-03-11 18:14:18,002 | INFO     | sum of deviations: -60724909886.00003
[2026-03-11 14:15:00] 2026-03-11 18:14:18,002 | INFO     | mean x: 1773247886.0
[2026-03-11 14:15:00] 2026-03-11 18:14:18,002 | INFO     | mean y: 2453473.398773006
[2026-03-11 14:15:00] 2026-03-11 18:14:18,002 | INFO     | intersect: 80190833295.88249
[2026-03-11 14:15:00] 2026-03-11 18:14:18,002 | INFO     | chi2: 0.3099038803639406
[2026-03-11 14:15:00] 2026-03-11 18:14:18,003 | INFO     | current chi2=0.3099038803639406 (change=0.06175896363144908 %)
[2026-03-11 14:15:00] 2026-03-11 18:14:18,003 | INFO     | left removable region: 20
[2026-03-11 14:15:00] 2026-03-11 18:14:18,003 | INFO     | sum of square deviations: 984941258.0
[2026-03-11 14:15:00] 2026-03-11 18:14:18,003 | INFO     | sum of deviations: -44945045891.0
[2026-03-11 14:15:00] 2026-03-11 18:14:18,003 | INFO     | mean x: 1773248008.0
[2026-03-11 14:15:00] 2026-03-11 18:14:18,003 | INFO     | mean y: 2438758.4013605444
[2026-03-11 14:15:00] 2026-03-11 18:14:18,003 | INFO     | intersect: 80919663464.28767
[2026-03-11 14:15:00] 2026-03-11 18:14:18,003 | INFO     | chi2: 0.28676143736325993
[2026-03-11 14:15:00] 2026-03-11 18:14:18,003 | INFO     | current memory leak: -45.63 B/s (using 147 data points, chi2=0.29)
[2026-03-11 14:15:00] 2026-03-11 18:14:18,004 | INFO     | could have reported an average CPU frequency of 3513 MHz (9 samples)
[2026-03-11 14:15:00] 2026-03-11 18:14:18,004 | INFO     | ..............................
[2026-03-11 14:15:00] 2026-03-11 18:14:18,004 | INFO     | . Timing measurements:
[2026-03-11 14:15:00] 2026-03-11 18:14:18,004 | INFO     | . get job = 0 s
[2026-03-11 14:15:00] 2026-03-11 18:14:18,004 | INFO     | . initial setup = 6 s
[2026-03-11 14:15:00] 2026-03-11 18:14:18,004 | INFO     | . payload setup = 3 s
[2026-03-11 14:15:00] 2026-03-11 18:14:18,004 | INFO     | . stage-in = 0 s
[2026-03-11 14:15:00] 2026-03-11 18:14:18,004 | INFO     | . payload execution = 10520 s
[2026-03-11 14:15:00] 2026-03-11 18:14:18,004 | INFO     | . stage-out = 0 s
[2026-03-11 14:15:00] 2026-03-11 18:14:18,004 | INFO     | . log creation = 0 s
[2026-03-11 14:15:00] 2026-03-11 18:14:18,004 | INFO     | ..............................
[2026-03-11 14:15:00] 2026-03-11 18:14:18,042 | INFO     | 
[2026-03-11 14:15:00] 2026-03-11 18:14:18,042 | INFO     | job summary report
[2026-03-11 14:15:00] 2026-03-11 18:14:18,042 | INFO     | --------------------------------------------------
[2026-03-11 14:15:00] 2026-03-11 18:14:18,043 | INFO     | PanDA job id: 7049740071
[2026-03-11 14:15:00] 2026-03-11 18:14:18,043 | INFO     | task id: 48998022
[2026-03-11 14:15:00] 2026-03-11 18:14:18,043 | INFO     | errors: (none)
[2026-03-11 14:15:00] 2026-03-11 18:14:18,043 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-11 14:15:00] 2026-03-11 18:14:18,043 | INFO     | pilot state: finished 
[2026-03-11 14:15:00] 2026-03-11 18:14:18,043 | INFO     | transexitcode: 0
[2026-03-11 14:15:00] 2026-03-11 18:14:18,043 | INFO     | exeerrorcode: 0
[2026-03-11 14:15:00] 2026-03-11 18:14:18,043 | INFO     | exeerrordiag: 
[2026-03-11 14:15:00] 2026-03-11 18:14:18,043 | INFO     | exitcode: 0
[2026-03-11 14:15:00] 2026-03-11 18:14:18,043 | INFO     | exitmsg: OK
[2026-03-11 14:15:00] 2026-03-11 18:14:18,043 | INFO     | cpuconsumptiontime: 41203 s
[2026-03-11 14:15:00] 2026-03-11 18:14:18,043 | INFO     | nevents: 400
[2026-03-11 14:15:00] 2026-03-11 18:14:18,043 | INFO     | neventsw: 0
[2026-03-11 14:15:00] 2026-03-11 18:14:18,044 | INFO     | pid: 915629
[2026-03-11 14:15:00] 2026-03-11 18:14:18,044 | INFO     | pgrp: 915629
[2026-03-11 14:15:00] 2026-03-11 18:14:18,044 | INFO     | corecount: 4
[2026-03-11 14:15:00] 2026-03-11 18:14:18,044 | INFO     | event service: False
[2026-03-11 14:15:00] 2026-03-11 18:14:18,044 | INFO     | sizes: {0: 2280299, 11: 2280299, 10527: 2309386, 10528: 2318467, 10529: 2318669}
[2026-03-11 14:15:00] 2026-03-11 18:14:18,044 | INFO     | --------------------------------------------------
[2026-03-11 14:15:00] 2026-03-11 18:14:18,044 | INFO     | 
[2026-03-11 14:15:00] 2026-03-11 18:14:18,044 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/2
[2026-03-11 14:15:00] 2026-03-11 18:14:18,055 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-11 14:15:00] 2026-03-11 18:14:18,055 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-11 14:15:00] 2026-03-11 18:14:18,056 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-11 14:15:00] 2026-03-11 18:14:18,056 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-11 14:15:00] 2026-03-11 18:14:18,056 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-11 14:15:00] 2026-03-11 18:14:18,056 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-11 14:15:00] 2026-03-11 18:14:18,056 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-11 14:15:00] 2026-03-11 18:14:18,056 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-11 14:15:00] 2026-03-11 18:14:18,056 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-11 14:15:00] 2026-03-11 18:14:18,056 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-11 14:15:00] 2026-03-11 18:14:18,056 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-11 14:15:00] 2026-03-11 18:14:18,057 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-11 14:15:00] 2026-03-11 18:14:18,057 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-11 14:15:00] 2026-03-11 18:14:18,057 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-11 14:15:00] 2026-03-11 18:14:18,057 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-11 14:15:00] 2026-03-11 18:14:18,057 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-11 14:15:00] 2026-03-11 18:14:18,057 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-11 14:15:00] 2026-03-11 18:14:18,057 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-11 14:15:00] 2026-03-11 18:14:18,057 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-11 14:15:00] 2026-03-11 18:14:18,057 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-11 14:15:00] 2026-03-11 18:14:18,057 | INFO     | job 7049740071 has completed (purged errors)
[2026-03-11 14:15:00] 2026-03-11 18:14:18,058 | INFO     | overall cleanup function is called
[2026-03-11 14:15:00] 2026-03-11 18:14:18,412 | INFO     | PID=911105 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-11 14:15:00] 2026-03-11 18:14:18,412 | INFO     | .. there are 3 such processes running
[2026-03-11 14:15:00] 2026-03-11 18:14:19,065 | INFO     | --- collectZombieJob: --- 10, [915629]
[2026-03-11 14:15:00] 2026-03-11 18:14:19,065 | INFO     | zombie collector waiting for pid 915629
[2026-03-11 14:15:00] 2026-03-11 18:14:19,065 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-11 14:15:00] 2026-03-11 18:14:19,065 | INFO     | collected zombie processes
[2026-03-11 14:15:00] 2026-03-11 18:14:19,065 | INFO     | will attempt to kill all subprocesses of pid=915629
[2026-03-11 14:15:00] 2026-03-11 18:14:19,150 | INFO     | process IDs to be killed: [915629] (in reverse order)
[2026-03-11 14:15:00] 2026-03-11 18:14:19,184 | WARNING  | found no corresponding commands to process id(s)
[2026-03-11 14:15:00] 2026-03-11 18:14:19,184 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-11 14:15:00] 2026-03-11 18:14:19,186 | INFO     | did not find any defunct processes belonging to 915629
[2026-03-11 14:15:00] 2026-03-11 18:14:19,188 | INFO     | did not find any defunct processes belonging to 915629
[2026-03-11 14:15:00] 2026-03-11 18:14:19,188 | INFO     | ready for new job
[2026-03-11 14:15:00] 2026-03-11 18:14:19,188 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-11 14:15:00] 2026-03-11 18:14:19,189 | INFO     | **************************************
[2026-03-11 14:15:00] 2026-03-11 18:14:19,189 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-11 14:15:00] 2026-03-11 18:14:19,189 | INFO     | **************************************
[2026-03-11 14:15:00] 2026-03-11 18:14:19,189 | INFO     | 
[2026-03-11 14:15:00] 2026-03-11 18:14:19,190 | INFO     | architecture information:
[2026-03-11 14:15:00] 2026-03-11 18:14:19,190 | INFO     | executing command: cat /etc/os-release
[2026-03-11 14:15:00] 2026-03-11 18:14:19,202 | INFO     | cat /etc/os-release:
[2026-03-11 14:15:00] NAME="CentOS Linux"
[2026-03-11 14:15:00] VERSION="7 (Core)"
[2026-03-11 14:15:00] ID="centos"
[2026-03-11 14:15:00] ID_LIKE="rhel fedora"
[2026-03-11 14:15:00] VERSION_ID="7"
[2026-03-11 14:15:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-11 14:15:00] ANSI_COLOR="0;31"
[2026-03-11 14:15:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-11 14:15:00] HOME_URL="https://www.centos.org/"
[2026-03-11 14:15:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-11 14:15:00] 
[2026-03-11 14:15:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-11 14:15:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-11 14:15:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-11 14:15:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-11 14:15:00] 
[2026-03-11 14:15:00] 2026-03-11 18:14:19,202 | INFO     | **************************************
[2026-03-11 14:15:00] 2026-03-11 18:14:19,703 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/2
[2026-03-11 14:15:00] 2026-03-11 18:14:19,710 | INFO     | sufficient remaining disk space (411241021440 B)
[2026-03-11 14:15:00] 2026-03-11 18:14:19,710 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-11 14:15:00] 2026-03-11 18:14:19,711 | INFO     | current server update state: UPDATING_FINAL
[2026-03-11 14:15:00] 2026-03-11 18:14:19,711 | INFO     | update_server=False
[2026-03-11 14:15:00] 2026-03-11 18:14:19,711 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-11 14:15:00] 2026-03-11 18:14:19,711 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 14:15:00] 2026-03-11 18:14:19,981 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 14:15:00] 2026-03-11 18:14:20,027 | INFO     | all data control threads have been joined
[2026-03-11 14:15:00] 2026-03-11 18:14:20,682 | INFO     | all payload control threads have been joined
[2026-03-11 14:15:00] 2026-03-11 18:14:20,716 | INFO     | [job] retrieve thread has finished
[2026-03-11 14:15:00] 2026-03-11 18:14:20,716 | INFO     | [job] queue monitor thread has finished
[2026-03-11 14:15:00] 2026-03-11 18:14:20,728 | INFO     | [payload] validate_post thread has finished
[2026-03-11 14:15:00] 2026-03-11 18:14:20,873 | INFO     | [data] copytool_in thread has finished
[2026-03-11 14:15:00] 2026-03-11 18:14:21,028 | INFO     | [data] control thread has finished
[2026-03-11 14:15:00] 2026-03-11 18:14:21,058 | INFO     | all job control threads have been joined
[2026-03-11 14:15:00] 2026-03-11 18:14:21,450 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 14:15:00] 2026-03-11 18:14:21,688 | INFO     | [payload] control thread has finished
[2026-03-11 14:15:00] 2026-03-11 18:14:21,825 | INFO     | [job] validate thread has finished
[2026-03-11 14:15:00] 2026-03-11 18:14:21,881 | INFO     | [payload] failed_post thread has finished
[2026-03-11 14:15:00] 2026-03-11 18:14:21,983 | INFO     | [data] copytool_out thread has finished
[2026-03-11 14:15:00] 2026-03-11 18:14:22,014 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 14:15:00] 2026-03-11 18:14:22,063 | INFO     | [job] control thread has finished
[2026-03-11 14:15:00] 2026-03-11 18:14:22,064 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 14:15:00] 2026-03-11 18:14:22,064 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 14:15:00] 2026-03-11 18:14:22,068 | WARNING  | process 915629 can no longer be monitored (due to stat problems) - aborting
[2026-03-11 14:15:00] 2026-03-11 18:14:22,120 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-03-11 14:15:00] 2026-03-11 18:14:22,204 | INFO     | number of running child processes to parent process 915629: 1
[2026-03-11 14:15:00] 2026-03-11 18:14:22,204 | INFO     | maximum number of monitored processes: 6
[2026-03-11 14:15:00] 2026-03-11 18:14:22,204 | INFO     | aborting job monitoring since job object (job id=7049740071) has expired
[2026-03-11 14:15:00] 2026-03-11 18:14:22,204 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-11 14:15:00] 2026-03-11 18:14:22,204 | INFO     | will abort loop
[2026-03-11 14:15:00] 2026-03-11 18:14:23,049 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 14:15:00] 2026-03-11 18:14:23,209 | INFO     | [job] job monitor thread has finished
[2026-03-11 14:15:00] 2026-03-11 18:14:27,054 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 14:15:00] 2026-03-11 18:14:50,552 | INFO     | PID=911105 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-11 14:15:00] 2026-03-11 18:14:50,552 | INFO     | .. there are 3 such processes running
[2026-03-11 14:15:00] 2026-03-11 18:14:50,552 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 14:15:00] 2026-03-11 18:14:50,552 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 14:15:00] 2026-03-11 18:14:50,552 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 14:15:00] 2026-03-11 18:14:54,405 | INFO     | [monitor] cgroup control has ended
[2026-03-11 14:15:00] 2026-03-11 18:14:55,410 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126168110708544)>', '<ExcThread(monitor, started 126167474497280)>']
[2026-03-11 14:15:00] 2026-03-11 18:14:55,576 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 14:15:00] 2026-03-11 18:14:55,577 | INFO     | [monitor] control thread has ended
[2026-03-11 14:15:00] 2026-03-11 18:15:00,435 | INFO     | all workflow threads have been joined
[2026-03-11 14:15:00] 2026-03-11 18:15:00,435 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 14:15:00] 2026-03-11 18:15:00,436 | INFO     | traces error code: 0
[2026-03-11 14:15:00] 2026-03-11 18:15:00,436 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 14:15:00] 2026-03-11 18:15:00,508 [wrapper] ==== pilot stdout END ====
[2026-03-11 14:15:00] 2026-03-11 18:15:00,510 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 14:15:00] 2026-03-11 18:15:00,511 [wrapper] pilotpid: 911105
[2026-03-11 14:15:00] 2026-03-11 18:15:00,512 [wrapper] Pilot exit status: 0
[2026-03-11 14:15:00] 2026-03-11 18:15:00,517 [wrapper] pandaids: 7049740071
[2026-03-11 14:15:00] 2026-03-11 18:15:00,532 [wrapper] cleanup supervisor_pilot  963977 911106
[2026-03-11 14:15:00] 2026-03-11 18:15:00,533 [wrapper] Test setup, not cleaning
[2026-03-11 14:15:00] 2026-03-11 18:15:00,535 [wrapper] apfmon messages muted
[2026-03-11 14:15:00] 2026-03-11 18:15:00,537 [wrapper] ==== wrapper stdout END ====
[2026-03-11 14:15:00] 2026-03-11 18:15:00,540 [wrapper] ==== wrapper stderr END ====
[2026-03-11 14:15:00]  *** Error codes and diagnostics ***
[2026-03-11 14:15:00]     "exeErrorCode": 0,
[2026-03-11 14:15:00]     "exeErrorDiag": "",
[2026-03-11 14:15:00]     "pilotErrorCode": 0,
[2026-03-11 14:15:00]     "pilotErrorDiag": "",
[2026-03-11 14:15:00]  *** Listing of results directory ***
[2026-03-11 14:15:00] total 563156
[2026-03-11 14:15:00] -rw-r--r-- 1 whitlerd whitlerd    585013 Mar 11 05:42 pilot3.tar.gz
[2026-03-11 14:15:00] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar 11 06:21 queuedata.json
[2026-03-11 14:15:00] -rwx------ 1 whitlerd whitlerd     36322 Mar 11 06:21 runpilot2-wrapper.sh
[2026-03-11 14:15:00] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar 11 11:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 14:15:00] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar 11 11:18 run_atlas
[2026-03-11 14:15:00] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar 11 11:18 job.xml
[2026-03-11 14:15:00] -rw-r--r-- 2 whitlerd whitlerd 326507135 Mar 11 11:18 EVNT.48998020._000096.pool.root.1
[2026-03-11 14:15:00] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 11 11:18 start_atlas.sh
[2026-03-11 14:15:00] drwxrwx--x 2 whitlerd whitlerd      4096 Mar 11 11:18 shared
[2026-03-11 14:15:00] -rw-r--r-- 2 whitlerd whitlerd    597541 Mar 11 11:18 input.tar.gz
[2026-03-11 14:15:00] -rw-rw-r-- 1 whitlerd whitlerd      6467 Mar 11 11:18 init_data.xml
[2026-03-11 14:15:00] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 11 11:18 boinc_setup_complete
[2026-03-11 14:15:00] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 11 11:18 boinc_lockfile
[2026-03-11 14:15:00] -rw-rw-r-- 1 whitlerd whitlerd      2609 Mar 11 11:18 pandaJob.out
[2026-03-11 14:15:00] -rw------- 1 whitlerd whitlerd   1007003 Mar 11 11:18 agis_schedconf.cvmfs.json
[2026-03-11 14:15:00] -rw------- 1 whitlerd whitlerd   1511578 Mar 11 11:18 agis_ddmendpoints.agis.ALL.json
[2026-03-11 14:15:00] -rw------- 1 whitlerd whitlerd       431 Mar 11 11:18 workernode_map.json
[2026-03-11 14:15:00] drwx------ 5 whitlerd whitlerd      4096 Mar 11 11:18 pilot3
[2026-03-11 14:15:00] -rw------- 1 whitlerd whitlerd 242468966 Mar 11 14:13 HITS.48998022._002499.pool.root.1
[2026-03-11 14:15:00] -rw------- 1 whitlerd whitlerd        95 Mar 11 14:14 pilot_heartbeat.json
[2026-03-11 14:15:00] -rw------- 1 whitlerd whitlerd      1029 Mar 11 14:14 memory_monitor_summary.json
[2026-03-11 14:15:00] -rw-rw-r-- 1 whitlerd whitlerd       530 Mar 11 14:14 boinc_task_state.xml
[2026-03-11 14:15:00] -rw------- 1 whitlerd whitlerd    339971 Mar 11 14:14 log.48998022._002499.job.log.tgz.1
[2026-03-11 14:15:00] -rw------- 1 whitlerd whitlerd      6359 Mar 11 14:14 heartbeat.json
[2026-03-11 14:15:00] -rw-rw-r-- 1 whitlerd whitlerd        28 Mar 11 14:14 wrapper_checkpoint.txt
[2026-03-11 14:15:00] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar 11 14:14 boinc_mmap_file
[2026-03-11 14:15:00] -rw------- 1 whitlerd whitlerd      5366 Mar 11 14:15 pilotlog.txt
[2026-03-11 14:15:00] -rw------- 1 whitlerd whitlerd   1536392 Mar 11 14:15 log.48998022._002499.job.log.1
[2026-03-11 14:15:00] -rw------- 1 whitlerd whitlerd       357 Mar 11 14:15 output.list
[2026-03-11 14:15:00] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar 11 14:15 runtime_log
[2026-03-11 14:15:00] -rw------- 1 whitlerd whitlerd   1894400 Mar 11 14:15 result.tar.gz
[2026-03-11 14:15:00] -rw-rw-r-- 1 whitlerd whitlerd      9055 Mar 11 14:15 runtime_log.err
[2026-03-11 14:15:00] -rw------- 1 whitlerd whitlerd       660 Mar 11 14:15 IRENDmHsVK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmATgLDmYz6sWo.diag
[2026-03-11 14:15:00] -rw-rw-r-- 1 whitlerd whitlerd     21454 Mar 11 14:15 stderr.txt
[2026-03-11 14:15:00] HITS file was successfully produced:
[2026-03-11 14:15:00] -rw------- 1 whitlerd whitlerd 242468966 Mar 11 14:13 shared/HITS.pool.root.1
[2026-03-11 14:15:00]  *** Contents of shared directory: ***
[2026-03-11 14:15:00] total 558104
[2026-03-11 14:15:00] -rw-r--r-- 2 whitlerd whitlerd 326507135 Mar 11 11:18 ATLAS.root_0
[2026-03-11 14:15:00] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 11 11:18 start_atlas.sh
[2026-03-11 14:15:00] -rw-r--r-- 2 whitlerd whitlerd    597541 Mar 11 11:18 input.tar.gz
[2026-03-11 14:15:00] -rw------- 1 whitlerd whitlerd 242468966 Mar 11 14:13 HITS.pool.root.1
[2026-03-11 14:15:00] -rw------- 1 whitlerd whitlerd   1894400 Mar 11 14:15 result.tar.gz
14:15:01 (906944): run_atlas exited; CPU time 41385.963414
14:15:01 (906944): called boinc_finish(0)

</stderr_txt>
]]>

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