Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
00:34:15 (630543): wrapper (7.7.26015): starting
00:34:15 (630543): wrapper: running run_atlas (--nthreads 4)
[2026-03-11 00:34:15] Arguments: --nthreads 4
[2026-03-11 00:34:15] Threads: 4
[2026-03-11 00:34:15] Checking for CVMFS
[2026-03-11 00:34:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 00:34:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 00:34:16] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 00:34:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 00:34:16] 2.13.3.0 1760492 6879 50432 157142 3 49 3520324 4096000 1832 130560 0 5509837 99.991 244299 821 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-11 00:34:16] CVMFS is ok
[2026-03-11 00:34:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 00:34:16] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-11 00:34:16] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-11 00:34:16] Further information can be found at the LHC@home message board.
[2026-03-11 00:34:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 00:34:16] Checking for apptainer binary...
[2026-03-11 00:34:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 00:34:16] Running /usr/bin/apptainer --version
[2026-03-11 00:34:16] apptainer version 1.4.5
[2026-03-11 00:34:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 00:34:16] OptiPlex7070-Ubuntu
[2026-03-11 00:34:16] apptainer works
[2026-03-11 00:34:16] Set ATHENA_PROC_NUMBER=4
[2026-03-11 00:34:16] Set ATHENA_CORE_NUMBER=4
[2026-03-11 00:34:16] Starting ATLAS job with PandaID=7049258812
[2026-03-11 00:34:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 03:22:54]  *** The last 200 lines of the pilot log: ***
[2026-03-11 03:22:54] 2026-03-11 07:22:19,379 | INFO     | time since job start (10068s) is within the limit (345600.0s)
[2026-03-11 03:22:54] 2026-03-11 07:22:19,809 | INFO     | job 7049258812 has state=finished
[2026-03-11 03:22:54] 2026-03-11 07:22:19,809 | INFO     | preparing for final server update for job 7049258812 in state='finished'
[2026-03-11 03:22:54] 2026-03-11 07:22:19,809 | INFO     | reading metadata from: /home/whitlerd/Desktop/BOINC/slots/2/PanDA_Pilot-7049258812/jobReport.json
[2026-03-11 03:22:54] 2026-03-11 07:22:19,811 | INFO     | added worker_node to metadata from /home/whitlerd/Desktop/BOINC/slots/2/workernode_map.json
[2026-03-11 03:22:54] 2026-03-11 07:22:19,811 | INFO     | this job has now completed (state=finished)
[2026-03-11 03:22:54] 2026-03-11 07:22:19,811 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-11 03:22:54] 2026-03-11 07:22:19,811 | INFO     | log transfer has been attempted: DONE
[2026-03-11 03:22:54] 2026-03-11 07:22:19,811 | INFO     | job 7049258812 has finished - writing final server update
[2026-03-11 03:22:54] 2026-03-11 07:22:19,812 | INFO     | total number of processed events: 400 (read)
[2026-03-11 03:22:54] 2026-03-11 07:22:19,814 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/2/PanDA_Pilot-7049258812/memory_monitor_summary.json (trf name=prmon)
[2026-03-11 03:22:54] 2026-03-11 07:22:19,815 | INFO     | extracted standard info from prmon json
[2026-03-11 03:22:54] 2026-03-11 07:22:19,815 | INFO     | extracted standard memory fields from prmon json
[2026-03-11 03:22:54] 2026-03-11 07:22:19,815 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-11 03:22:54] 2026-03-11 07:22:19,815 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-11 03:22:54] 2026-03-11 07:22:19,815 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-11 03:22:54] 2026-03-11 07:22:19,817 | INFO     | fitting pss+swap vs Time
[2026-03-11 03:22:54] 2026-03-11 07:22:19,818 | INFO     | sum of square deviations: 1392881930.0
[2026-03-11 03:22:54] 2026-03-11 07:22:19,819 | INFO     | sum of deviations: -29300354540.999996
[2026-03-11 03:22:54] 2026-03-11 07:22:19,819 | INFO     | mean x: 1773208692.0
[2026-03-11 03:22:54] 2026-03-11 07:22:19,819 | INFO     | mean y: 2387813.8545454545
[2026-03-11 03:22:54] 2026-03-11 07:22:19,819 | INFO     | intersect: 37303211546.11652
[2026-03-11 03:22:54] 2026-03-11 07:22:19,819 | INFO     | chi2: 1.6351689162866698
[2026-03-11 03:22:54] 2026-03-11 07:22:19,819 | INFO     | sum of square deviations: 1270051720.0
[2026-03-11 03:22:54] 2026-03-11 07:22:19,820 | INFO     | sum of deviations: -27999116632.0
[2026-03-11 03:22:54] 2026-03-11 07:22:19,820 | INFO     | mean x: 1773208539.5
[2026-03-11 03:22:54] 2026-03-11 07:22:19,820 | INFO     | mean y: 2389430.25
[2026-03-11 03:22:54] 2026-03-11 07:22:19,820 | INFO     | intersect: 39093925568.88763
[2026-03-11 03:22:54] 2026-03-11 07:22:19,821 | INFO     | chi2: 1.6288237569441584
[2026-03-11 03:22:54] 2026-03-11 07:22:19,821 | INFO     | current chi2=1.6288237569441584 (change=0.38804305043424947 %)
[2026-03-11 03:22:54] 2026-03-11 07:22:19,821 | INFO     | right removable region: 159
[2026-03-11 03:22:54] 2026-03-11 07:22:19,821 | INFO     | sum of square deviations: 1270051720.0
[2026-03-11 03:22:54] 2026-03-11 07:22:19,822 | INFO     | sum of deviations: -45974564668.000015
[2026-03-11 03:22:54] 2026-03-11 07:22:19,822 | INFO     | mean x: 1773208844.5
[2026-03-11 03:22:54] 2026-03-11 07:22:19,822 | INFO     | mean y: 2408051.0875
[2026-03-11 03:22:54] 2026-03-11 07:22:19,822 | INFO     | intersect: 64190742594.923904
[2026-03-11 03:22:54] 2026-03-11 07:22:19,822 | INFO     | chi2: 0.36087135360764383
[2026-03-11 03:22:54] 2026-03-11 07:22:19,823 | INFO     | current chi2=0.36087135360764383 (change=77.93063762322781 %)
[2026-03-11 03:22:54] 2026-03-11 07:22:19,823 | INFO     | sum of square deviations: 1154663510.0
[2026-03-11 03:22:54] 2026-03-11 07:22:19,823 | INFO     | sum of deviations: -38897611543.00001
[2026-03-11 03:22:54] 2026-03-11 07:22:19,824 | INFO     | mean x: 1773208997.0
[2026-03-11 03:22:54] 2026-03-11 07:22:19,824 | INFO     | mean y: 2398688.8838709677
[2026-03-11 03:22:54] 2026-03-11 07:22:19,824 | INFO     | intersect: 59737199479.33984
[2026-03-11 03:22:54] 2026-03-11 07:22:19,824 | INFO     | chi2: 0.3490156150742751
[2026-03-11 03:22:54] 2026-03-11 07:22:19,824 | INFO     | current chi2=0.3490156150742751 (change=3.2853088544841533 %)
[2026-03-11 03:22:54] 2026-03-11 07:22:19,824 | INFO     | left removable region: 20
[2026-03-11 03:22:54] 2026-03-11 07:22:19,824 | INFO     | sum of square deviations: 832722590.0
[2026-03-11 03:22:54] 2026-03-11 07:22:19,825 | INFO     | sum of deviations: -22216604369.0
[2026-03-11 03:22:54] 2026-03-11 07:22:19,825 | INFO     | mean x: 1773209119.0
[2026-03-11 03:22:54] 2026-03-11 07:22:19,825 | INFO     | mean y: 2377540.0287769786
[2026-03-11 03:22:54] 2026-03-11 07:22:19,825 | INFO     | intersect: 47310671962.93622
[2026-03-11 03:22:54] 2026-03-11 07:22:19,826 | INFO     | chi2: 0.2792233582006675
[2026-03-11 03:22:54] 2026-03-11 07:22:19,826 | INFO     | current memory leak: -26.68 B/s (using 139 data points, chi2=0.28)
[2026-03-11 03:22:54] 2026-03-11 07:22:19,826 | INFO     | could have reported an average CPU frequency of 3496 MHz (9 samples)
[2026-03-11 03:22:54] 2026-03-11 07:22:19,826 | INFO     | ..............................
[2026-03-11 03:22:54] 2026-03-11 07:22:19,826 | INFO     | . Timing measurements:
[2026-03-11 03:22:54] 2026-03-11 07:22:19,826 | INFO     | . get job = 0 s
[2026-03-11 03:22:54] 2026-03-11 07:22:19,826 | INFO     | . initial setup = 6 s
[2026-03-11 03:22:54] 2026-03-11 07:22:19,826 | INFO     | . payload setup = 4 s
[2026-03-11 03:22:54] 2026-03-11 07:22:19,827 | INFO     | . stage-in = 0 s
[2026-03-11 03:22:54] 2026-03-11 07:22:19,827 | INFO     | . payload execution = 10045 s
[2026-03-11 03:22:54] 2026-03-11 07:22:19,827 | INFO     | . stage-out = 0 s
[2026-03-11 03:22:54] 2026-03-11 07:22:19,827 | INFO     | . log creation = 0 s
[2026-03-11 03:22:54] 2026-03-11 07:22:19,827 | INFO     | ..............................
[2026-03-11 03:22:54] 2026-03-11 07:22:20,339 | INFO     | 
[2026-03-11 03:22:54] 2026-03-11 07:22:20,339 | INFO     | job summary report
[2026-03-11 03:22:54] 2026-03-11 07:22:20,339 | INFO     | --------------------------------------------------
[2026-03-11 03:22:54] 2026-03-11 07:22:20,339 | INFO     | PanDA job id: 7049258812
[2026-03-11 03:22:54] 2026-03-11 07:22:20,339 | INFO     | task id: 48967011
[2026-03-11 03:22:54] 2026-03-11 07:22:20,339 | INFO     | errors: (none)
[2026-03-11 03:22:54] 2026-03-11 07:22:20,339 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-11 03:22:54] 2026-03-11 07:22:20,339 | INFO     | pilot state: finished 
[2026-03-11 03:22:54] 2026-03-11 07:22:20,339 | INFO     | transexitcode: 0
[2026-03-11 03:22:54] 2026-03-11 07:22:20,339 | INFO     | exeerrorcode: 0
[2026-03-11 03:22:54] 2026-03-11 07:22:20,340 | INFO     | exeerrordiag: 
[2026-03-11 03:22:54] 2026-03-11 07:22:20,340 | INFO     | exitcode: 0
[2026-03-11 03:22:54] 2026-03-11 07:22:20,340 | INFO     | exitmsg: OK
[2026-03-11 03:22:54] 2026-03-11 07:22:20,340 | INFO     | cpuconsumptiontime: 39050 s
[2026-03-11 03:22:54] 2026-03-11 07:22:20,340 | INFO     | nevents: 400
[2026-03-11 03:22:54] 2026-03-11 07:22:20,340 | INFO     | neventsw: 0
[2026-03-11 03:22:54] 2026-03-11 07:22:20,340 | INFO     | pid: 639231
[2026-03-11 03:22:54] 2026-03-11 07:22:20,340 | INFO     | pgrp: 639231
[2026-03-11 03:22:54] 2026-03-11 07:22:20,340 | INFO     | corecount: 4
[2026-03-11 03:22:54] 2026-03-11 07:22:20,340 | INFO     | event service: False
[2026-03-11 03:22:54] 2026-03-11 07:22:20,340 | INFO     | sizes: {0: 2279990, 1: 2280280, 11: 2280280, 10053: 2318037, 10055: 2318037, 10057: 2318295}
[2026-03-11 03:22:54] 2026-03-11 07:22:20,340 | INFO     | --------------------------------------------------
[2026-03-11 03:22:54] 2026-03-11 07:22:20,341 | INFO     | 
[2026-03-11 03:22:54] 2026-03-11 07:22:20,341 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/2
[2026-03-11 03:22:54] 2026-03-11 07:22:20,355 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-11 03:22:54] 2026-03-11 07:22:20,355 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-11 03:22:54] 2026-03-11 07:22:20,355 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-11 03:22:54] 2026-03-11 07:22:20,356 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-11 03:22:54] 2026-03-11 07:22:20,356 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-11 03:22:54] 2026-03-11 07:22:20,356 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-11 03:22:54] 2026-03-11 07:22:20,356 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-11 03:22:54] 2026-03-11 07:22:20,356 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-11 03:22:54] 2026-03-11 07:22:20,356 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-11 03:22:54] 2026-03-11 07:22:20,356 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-11 03:22:54] 2026-03-11 07:22:20,356 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-11 03:22:54] 2026-03-11 07:22:20,356 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-11 03:22:54] 2026-03-11 07:22:20,356 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-11 03:22:54] 2026-03-11 07:22:20,356 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-11 03:22:54] 2026-03-11 07:22:20,357 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-11 03:22:54] 2026-03-11 07:22:20,357 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-11 03:22:54] 2026-03-11 07:22:20,357 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-11 03:22:54] 2026-03-11 07:22:20,357 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-11 03:22:54] 2026-03-11 07:22:20,357 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-11 03:22:54] 2026-03-11 07:22:20,357 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-11 03:22:54] 2026-03-11 07:22:20,357 | INFO     | job 7049258812 has completed (purged errors)
[2026-03-11 03:22:54] 2026-03-11 07:22:20,357 | INFO     | overall cleanup function is called
[2026-03-11 03:22:54] 2026-03-11 07:22:21,364 | INFO     | --- collectZombieJob: --- 10, [639231]
[2026-03-11 03:22:54] 2026-03-11 07:22:21,364 | INFO     | zombie collector waiting for pid 639231
[2026-03-11 03:22:54] 2026-03-11 07:22:21,364 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-11 03:22:54] 2026-03-11 07:22:21,364 | INFO     | collected zombie processes
[2026-03-11 03:22:54] 2026-03-11 07:22:21,364 | INFO     | will attempt to kill all subprocesses of pid=639231
[2026-03-11 03:22:54] 2026-03-11 07:22:21,509 | INFO     | process IDs to be killed: [639231] (in reverse order)
[2026-03-11 03:22:54] 2026-03-11 07:22:21,546 | WARNING  | found no corresponding commands to process id(s)
[2026-03-11 03:22:54] 2026-03-11 07:22:21,547 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-11 03:22:54] 2026-03-11 07:22:21,550 | INFO     | did not find any defunct processes belonging to 639231
[2026-03-11 03:22:54] 2026-03-11 07:22:21,552 | INFO     | did not find any defunct processes belonging to 639231
[2026-03-11 03:22:54] 2026-03-11 07:22:21,553 | INFO     | ready for new job
[2026-03-11 03:22:54] 2026-03-11 07:22:21,553 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-11 03:22:54] 2026-03-11 07:22:21,554 | INFO     | **************************************
[2026-03-11 03:22:54] 2026-03-11 07:22:21,554 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-11 03:22:54] 2026-03-11 07:22:21,554 | INFO     | **************************************
[2026-03-11 03:22:54] 2026-03-11 07:22:21,554 | INFO     | 
[2026-03-11 03:22:54] 2026-03-11 07:22:21,555 | INFO     | architecture information:
[2026-03-11 03:22:54] 2026-03-11 07:22:21,555 | INFO     | executing command: cat /etc/os-release
[2026-03-11 03:22:54] 2026-03-11 07:22:21,566 | INFO     | cat /etc/os-release:
[2026-03-11 03:22:54] NAME="CentOS Linux"
[2026-03-11 03:22:54] VERSION="7 (Core)"
[2026-03-11 03:22:54] ID="centos"
[2026-03-11 03:22:54] ID_LIKE="rhel fedora"
[2026-03-11 03:22:54] VERSION_ID="7"
[2026-03-11 03:22:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-11 03:22:54] ANSI_COLOR="0;31"
[2026-03-11 03:22:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-11 03:22:54] HOME_URL="https://www.centos.org/"
[2026-03-11 03:22:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-11 03:22:54] 
[2026-03-11 03:22:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-11 03:22:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-11 03:22:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-11 03:22:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-11 03:22:54] 
[2026-03-11 03:22:54] 2026-03-11 07:22:21,566 | INFO     | **************************************
[2026-03-11 03:22:54] 2026-03-11 07:22:22,069 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/2
[2026-03-11 03:22:54] 2026-03-11 07:22:22,082 | INFO     | sufficient remaining disk space (411569225728 B)
[2026-03-11 03:22:54] 2026-03-11 07:22:22,082 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-11 03:22:54] 2026-03-11 07:22:22,082 | INFO     | current server update state: UPDATING_FINAL
[2026-03-11 03:22:54] 2026-03-11 07:22:22,083 | INFO     | update_server=False
[2026-03-11 03:22:54] 2026-03-11 07:22:22,083 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-11 03:22:54] 2026-03-11 07:22:22,083 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 03:22:54] 2026-03-11 07:22:22,393 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-11 03:22:54] 2026-03-11 07:22:22,393 | INFO     | aborting loop
[2026-03-11 03:22:54] 2026-03-11 07:22:22,512 | INFO     | all payload control threads have been joined
[2026-03-11 03:22:54] 2026-03-11 07:22:22,522 | INFO     | all job control threads have been joined
[2026-03-11 03:22:54] 2026-03-11 07:22:22,959 | INFO     | all data control threads have been joined
[2026-03-11 03:22:54] 2026-03-11 07:22:23,088 | INFO     | [job] retrieve thread has finished
[2026-03-11 03:22:54] 2026-03-11 07:22:23,145 | INFO     | [payload] failed_post thread has finished
[2026-03-11 03:22:54] 2026-03-11 07:22:23,182 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 03:22:54] 2026-03-11 07:22:23,398 | INFO     | [job] job monitor thread has finished
[2026-03-11 03:22:54] 2026-03-11 07:22:23,405 | INFO     | [data] copytool_in thread has finished
[2026-03-11 03:22:54] 2026-03-11 07:22:23,517 | INFO     | [payload] control thread has finished
[2026-03-11 03:22:54] 2026-03-11 07:22:23,527 | INFO     | [job] control thread has finished
[2026-03-11 03:22:54] 2026-03-11 07:22:23,623 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 03:22:54] 2026-03-11 07:22:23,964 | INFO     | [data] control thread has finished
[2026-03-11 03:22:54] 2026-03-11 07:22:23,970 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 03:22:54] 2026-03-11 07:22:24,088 | INFO     | [data] copytool_out thread has finished
[2026-03-11 03:22:54] 2026-03-11 07:22:24,420 | INFO     | [job] validate thread has finished
[2026-03-11 03:22:54] 2026-03-11 07:22:24,556 | INFO     | [payload] validate_post thread has finished
[2026-03-11 03:22:54] 2026-03-11 07:22:24,561 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 03:22:54] 2026-03-11 07:22:24,908 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 03:22:54] 2026-03-11 07:22:25,914 | INFO     | [job] queue monitor thread has finished
[2026-03-11 03:22:54] 2026-03-11 07:22:27,628 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 03:22:54] 2026-03-11 07:22:32,536 | INFO     | job.realtimelogging is not enabled
[2026-03-11 03:22:54] 2026-03-11 07:22:33,541 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 03:22:54] 2026-03-11 07:22:47,951 | INFO     | [monitor] cgroup control has ended
[2026-03-11 03:22:54] 2026-03-11 07:22:49,033 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129383132493632)>', '<ExcThread(monitor, started 129382634993408)>']
[2026-03-11 03:22:54] 2026-03-11 07:22:52,574 | INFO     | PID=634721 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-11 03:22:54] 2026-03-11 07:22:52,574 | INFO     | .. there are 3 such processes running
[2026-03-11 03:22:54] 2026-03-11 07:22:52,574 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 03:22:54] 2026-03-11 07:22:52,574 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 03:22:54] 2026-03-11 07:22:52,574 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 03:22:54] 2026-03-11 07:22:52,575 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 03:22:54] 2026-03-11 07:22:52,575 | INFO     | [monitor] control thread has ended
[2026-03-11 03:22:54] 2026-03-11 07:22:54,058 | INFO     | all workflow threads have been joined
[2026-03-11 03:22:54] 2026-03-11 07:22:54,058 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 03:22:54] 2026-03-11 07:22:54,058 | INFO     | traces error code: 0
[2026-03-11 03:22:54] 2026-03-11 07:22:54,058 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 03:22:54] 2026-03-11 07:22:54,131 [wrapper] ==== pilot stdout END ====
[2026-03-11 03:22:54] 2026-03-11 07:22:54,132 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 03:22:54] 2026-03-11 07:22:54,134 [wrapper] pilotpid: 634721
[2026-03-11 03:22:54] 2026-03-11 07:22:54,136 [wrapper] Pilot exit status: 0
[2026-03-11 03:22:54] 2026-03-11 07:22:54,142 [wrapper] pandaids: 7049258812
[2026-03-11 03:22:54] 2026-03-11 07:22:54,167 [wrapper] cleanup supervisor_pilot  699640 634722
[2026-03-11 03:22:54] 2026-03-11 07:22:54,169 [wrapper] Test setup, not cleaning
[2026-03-11 03:22:54] 2026-03-11 07:22:54,171 [wrapper] apfmon messages muted
[2026-03-11 03:22:54] 2026-03-11 07:22:54,173 [wrapper] ==== wrapper stdout END ====
[2026-03-11 03:22:54] 2026-03-11 07:22:54,175 [wrapper] ==== wrapper stderr END ====
[2026-03-11 03:22:54]  *** Error codes and diagnostics ***
[2026-03-11 03:22:54]     "exeErrorCode": 0,
[2026-03-11 03:22:54]     "exeErrorDiag": "",
[2026-03-11 03:22:54]     "pilotErrorCode": 0,
[2026-03-11 03:22:54]     "pilotErrorDiag": "",
[2026-03-11 03:22:54]  *** Listing of results directory ***
[2026-03-11 03:22:54] total 422920
[2026-03-11 03:22:54] -rw-r--r-- 1 whitlerd whitlerd    585013 Mar 10 19:17 pilot3.tar.gz
[2026-03-11 03:22:54] -rwx------ 1 whitlerd whitlerd     36322 Mar 10 19:17 runpilot2-wrapper.sh
[2026-03-11 03:22:54] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar 10 19:18 queuedata.json
[2026-03-11 03:22:54] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar 11 00:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 03:22:54] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar 11 00:34 run_atlas
[2026-03-11 03:22:54] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar 11 00:34 job.xml
[2026-03-11 03:22:54] -rw-r--r-- 2 whitlerd whitlerd 216863312 Mar 11 00:34 EVNT.48967008._000306.pool.root.1
[2026-03-11 03:22:54] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 11 00:34 start_atlas.sh
[2026-03-11 03:22:54] drwxrwx--x 2 whitlerd whitlerd      4096 Mar 11 00:34 shared
[2026-03-11 03:22:54] -rw-r--r-- 2 whitlerd whitlerd    597526 Mar 11 00:34 input.tar.gz
[2026-03-11 03:22:54] -rw-rw-r-- 1 whitlerd whitlerd      6467 Mar 11 00:34 init_data.xml
[2026-03-11 03:22:54] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 11 00:34 boinc_setup_complete
[2026-03-11 03:22:54] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 11 00:34 boinc_lockfile
[2026-03-11 03:22:54] -rw-rw-r-- 1 whitlerd whitlerd      2561 Mar 11 00:34 pandaJob.out
[2026-03-11 03:22:54] -rw------- 1 whitlerd whitlerd   1006644 Mar 11 00:34 agis_schedconf.cvmfs.json
[2026-03-11 03:22:54] -rw------- 1 whitlerd whitlerd   1511578 Mar 11 00:34 agis_ddmendpoints.agis.ALL.json
[2026-03-11 03:22:54] -rw------- 1 whitlerd whitlerd       439 Mar 11 00:34 workernode_map.json
[2026-03-11 03:22:54] drwx------ 5 whitlerd whitlerd      4096 Mar 11 00:34 pilot3
[2026-03-11 03:22:54] -rw-rw-r-- 1 whitlerd whitlerd       530 Mar 11 03:21 boinc_task_state.xml
[2026-03-11 03:22:54] -rw------- 1 whitlerd whitlerd 208621059 Mar 11 03:21 HITS.48967011._007781.pool.root.1
[2026-03-11 03:22:54] -rw------- 1 whitlerd whitlerd        95 Mar 11 03:21 pilot_heartbeat.json
[2026-03-11 03:22:54] -rw------- 1 whitlerd whitlerd      1021 Mar 11 03:22 memory_monitor_summary.json
[2026-03-11 03:22:54] -rw------- 1 whitlerd whitlerd    355391 Mar 11 03:22 log.48967011._007781.job.log.tgz.1
[2026-03-11 03:22:54] -rw------- 1 whitlerd whitlerd      6354 Mar 11 03:22 heartbeat.json
[2026-03-11 03:22:54] -rw-rw-r-- 1 whitlerd whitlerd        28 Mar 11 03:22 wrapper_checkpoint.txt
[2026-03-11 03:22:54] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar 11 03:22 boinc_mmap_file
[2026-03-11 03:22:54] -rw------- 1 whitlerd whitlerd      4905 Mar 11 03:22 pilotlog.txt
[2026-03-11 03:22:54] -rw------- 1 whitlerd whitlerd   1469424 Mar 11 03:22 log.48967011._007781.job.log.1
[2026-03-11 03:22:54] -rw------- 1 whitlerd whitlerd       357 Mar 11 03:22 output.list
[2026-03-11 03:22:54] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar 11 03:22 runtime_log
[2026-03-11 03:22:54] -rw------- 1 whitlerd whitlerd   1843200 Mar 11 03:22 result.tar.gz
[2026-03-11 03:22:54] -rw------- 1 whitlerd whitlerd       660 Mar 11 03:22 V44KDmsVLK9n9Rq4apOajLDm4fhM0noT9bVooX4SDm1eeLDmyg2Kxm.diag
[2026-03-11 03:22:54] -rw-rw-r-- 1 whitlerd whitlerd      9055 Mar 11 03:22 runtime_log.err
[2026-03-11 03:22:54] -rw-rw-r-- 1 whitlerd whitlerd     21341 Mar 11 03:22 stderr.txt
[2026-03-11 03:22:54] HITS file was successfully produced:
[2026-03-11 03:22:54] -rw------- 1 whitlerd whitlerd 208621059 Mar 11 03:21 shared/HITS.pool.root.1
[2026-03-11 03:22:54]  *** Contents of shared directory: ***
[2026-03-11 03:22:54] total 417924
[2026-03-11 03:22:54] -rw-r--r-- 2 whitlerd whitlerd 216863312 Mar 11 00:34 ATLAS.root_0
[2026-03-11 03:22:54] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 11 00:34 start_atlas.sh
[2026-03-11 03:22:54] -rw-r--r-- 2 whitlerd whitlerd    597526 Mar 11 00:34 input.tar.gz
[2026-03-11 03:22:54] -rw------- 1 whitlerd whitlerd 208621059 Mar 11 03:21 HITS.pool.root.1
[2026-03-11 03:22:54] -rw------- 1 whitlerd whitlerd   1843200 Mar 11 03:22 result.tar.gz
03:22:55 (630543): run_atlas exited; CPU time 39220.839520
03:22:55 (630543): called boinc_finish(0)

</stderr_txt>
]]>

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