Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:08:57 (4897): wrapper (7.7.26015): starting
14:08:57 (4897): wrapper: running run_atlas (--nthreads 8)
[2026-03-08 14:08:57] Arguments: --nthreads 8
[2026-03-08 14:08:57] Threads: 8
[2026-03-08 14:08:57] Checking for CVMFS
[2026-03-08 14:08:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-08 14:08:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-08 14:08:57] Running cvmfs_config stat atlas.cern.ch
[2026-03-08 14:08:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-08 14:08:58] 2.11.2.0 5808 317592 122580 157048 3 50 9595696 18432000 2749 130560 0 234575241 99.967 14577698 8648 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2026-03-08 14:08:58] CVMFS is ok
[2026-03-08 14:08:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 14:08:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 14:08:58] Further information can be found at the LHC@home message board.
[2026-03-08 14:08:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 14:08:58] Checking for apptainer binary...
[2026-03-08 14:08:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-08 14:08:58] Running /usr/bin/apptainer --version
[2026-03-08 14:08:58] apptainer version 1.3.2-1.el7
[2026-03-08 14:08:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 14:08:58] c-9-34.aglt2.org
[2026-03-08 14:08:58] apptainer works
[2026-03-08 14:08:58] Set ATHENA_PROC_NUMBER=8
[2026-03-08 14:08:58] Set ATHENA_CORE_NUMBER=8
[2026-03-08 14:08:58] Starting ATLAS job with PandaID=7039864700
[2026-03-08 14:08:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 16:40:35]  *** The last 200 lines of the pilot log: ***
[2026-03-08 16:40:35] 2026-03-08 20:40:01,249 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-08 16:40:35] 2026-03-08 20:40:01,249 | INFO     | log transfer has been attempted: DONE
[2026-03-08 16:40:35] 2026-03-08 20:40:01,249 | INFO     | job 7039864700 has finished - writing final server update
[2026-03-08 16:40:35] 2026-03-08 20:40:01,250 | INFO     | total number of processed events: 400 (read)
[2026-03-08 16:40:35] 2026-03-08 20:40:01,256 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7039864700/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 16:40:35] 2026-03-08 20:40:01,257 | INFO     | extracted standard info from prmon json
[2026-03-08 16:40:35] 2026-03-08 20:40:01,257 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 16:40:35] 2026-03-08 20:40:01,257 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 16:40:35] 2026-03-08 20:40:01,258 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 16:40:35] 2026-03-08 20:40:01,258 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 16:40:35] 2026-03-08 20:40:01,262 | INFO     | fitting pss+swap vs Time
[2026-03-08 16:40:35] 2026-03-08 20:40:01,262 | INFO     | sum of square deviations: 1025693650.0
[2026-03-08 16:40:35] 2026-03-08 20:40:01,263 | INFO     | sum of deviations: 12767136397.999998
[2026-03-08 16:40:35] 2026-03-08 20:40:01,264 | INFO     | mean x: 1772997881.0
[2026-03-08 16:40:35] 2026-03-08 20:40:01,264 | INFO     | mean y: 2439745.9194630873
[2026-03-08 16:40:35] 2026-03-08 20:40:01,264 | INFO     | intersect: -22066631053.23384
[2026-03-08 16:40:35] 2026-03-08 20:40:01,264 | INFO     | chi2: 2.049756632149103
[2026-03-08 16:40:35] 2026-03-08 20:40:01,265 | INFO     | sum of square deviations: 925859220.0
[2026-03-08 16:40:35] 2026-03-08 20:40:01,266 | INFO     | sum of deviations: 21851247431.000004
[2026-03-08 16:40:35] 2026-03-08 20:40:01,266 | INFO     | mean x: 1772997728.5
[2026-03-08 16:40:35] 2026-03-08 20:40:01,266 | INFO     | mean y: 2453217.097222222
[2026-03-08 16:40:35] 2026-03-08 20:40:01,266 | INFO     | intersect: -41842150393.432755
[2026-03-08 16:40:35] 2026-03-08 20:40:01,267 | INFO     | chi2: 1.2761906118400688
[2026-03-08 16:40:35] 2026-03-08 20:40:01,267 | INFO     | current chi2=1.2761906118400688 (change=37.739408092460984 %)
[2026-03-08 16:40:35] 2026-03-08 20:40:01,267 | INFO     | sum of square deviations: 832722590.0
[2026-03-08 16:40:35] 2026-03-08 20:40:01,268 | INFO     | sum of deviations: 20995156717.00001
[2026-03-08 16:40:35] 2026-03-08 20:40:01,268 | INFO     | mean x: 1772997576.0
[2026-03-08 16:40:35] 2026-03-08 20:40:01,268 | INFO     | mean y: 2451814.676258993
[2026-03-08 16:40:35] 2026-03-08 20:40:01,269 | INFO     | intersect: -44699544281.023674
[2026-03-08 16:40:35] 2026-03-08 20:40:01,269 | INFO     | chi2: 1.2770081808114198
[2026-03-08 16:40:35] 2026-03-08 20:40:01,269 | INFO     | current chi2=1.2770081808114198 (change=-0.06406323348298126 %)
[2026-03-08 16:40:35] 2026-03-08 20:40:01,269 | INFO     | right removable region: 138
[2026-03-08 16:40:35] 2026-03-08 20:40:01,270 | INFO     | sum of square deviations: 925859220.0
[2026-03-08 16:40:35] 2026-03-08 20:40:01,270 | INFO     | sum of deviations: -6157647623.0
[2026-03-08 16:40:35] 2026-03-08 20:40:01,271 | INFO     | mean x: 1772998033.5
[2026-03-08 16:40:35] 2026-03-08 20:40:01,271 | INFO     | mean y: 2468131.875
[2026-03-08 16:40:35] 2026-03-08 20:40:01,271 | INFO     | intersect: 11794214534.276165
[2026-03-08 16:40:35] 2026-03-08 20:40:01,271 | INFO     | chi2: 0.8082498317185861
[2026-03-08 16:40:35] 2026-03-08 20:40:01,272 | INFO     | current chi2=0.8082498317185861 (change=60.56849778936135 %)
[2026-03-08 16:40:35] 2026-03-08 20:40:01,272 | INFO     | sum of square deviations: 832722590.0
[2026-03-08 16:40:35] 2026-03-08 20:40:01,273 | INFO     | sum of deviations: -6307294897.0
[2026-03-08 16:40:35] 2026-03-08 20:40:01,273 | INFO     | mean x: 1772998186.0
[2026-03-08 16:40:35] 2026-03-08 20:40:01,273 | INFO     | mean y: 2468401.81294964
[2026-03-08 16:40:35] 2026-03-08 20:40:01,273 | INFO     | intersect: 13431697469.500494
[2026-03-08 16:40:35] 2026-03-08 20:40:01,274 | INFO     | chi2: 0.7992397488238585
[2026-03-08 16:40:35] 2026-03-08 20:40:01,274 | INFO     | current chi2=0.7992397488238585 (change=1.1147645865350089 %)
[2026-03-08 16:40:35] 2026-03-08 20:40:01,274 | INFO     | left removable region: 20
[2026-03-08 16:40:35] 2026-03-08 20:40:01,274 | INFO     | sum of square deviations: 509440249.5
[2026-03-08 16:40:35] 2026-03-08 20:40:01,275 | INFO     | sum of deviations: 1057133599.0000001
[2026-03-08 16:40:35] 2026-03-08 20:40:01,275 | INFO     | mean x: 1772998155.5
[2026-03-08 16:40:35] 2026-03-08 20:40:01,275 | INFO     | mean y: 2486848.0169491526
[2026-03-08 16:40:35] 2026-03-08 20:40:01,276 | INFO     | intersect: -3676641220.453575
[2026-03-08 16:40:35] 2026-03-08 20:40:01,276 | INFO     | chi2: 0.00021466234784903022
[2026-03-08 16:40:35] 2026-03-08 20:40:01,276 | INFO     | current memory leak: 2.08 B/s (using 118 data points, chi2=0.00)
[2026-03-08 16:40:35] 2026-03-08 20:40:01,277 | INFO     | could have reported an average CPU frequency of 2999 MHz (9 samples)
[2026-03-08 16:40:35] 2026-03-08 20:40:01,277 | INFO     | ..............................
[2026-03-08 16:40:35] 2026-03-08 20:40:01,277 | INFO     | . Timing measurements:
[2026-03-08 16:40:35] 2026-03-08 20:40:01,277 | INFO     | . get job = 0 s
[2026-03-08 16:40:35] 2026-03-08 20:40:01,277 | INFO     | . initial setup = 7 s
[2026-03-08 16:40:35] 2026-03-08 20:40:01,277 | INFO     | . payload setup = 4 s
[2026-03-08 16:40:35] 2026-03-08 20:40:01,278 | INFO     | . stage-in = 0 s
[2026-03-08 16:40:35] 2026-03-08 20:40:01,278 | INFO     | . payload execution = 9034 s
[2026-03-08 16:40:35] 2026-03-08 20:40:01,278 | INFO     | . stage-out = 1 s
[2026-03-08 16:40:35] 2026-03-08 20:40:01,278 | INFO     | . log creation = 0 s
[2026-03-08 16:40:35] 2026-03-08 20:40:01,278 | INFO     | ..............................
[2026-03-08 16:40:35] 2026-03-08 20:40:01,367 | INFO     | 
[2026-03-08 16:40:35] 2026-03-08 20:40:01,367 | INFO     | job summary report
[2026-03-08 16:40:35] 2026-03-08 20:40:01,367 | INFO     | --------------------------------------------------
[2026-03-08 16:40:35] 2026-03-08 20:40:01,367 | INFO     | PanDA job id: 7039864700
[2026-03-08 16:40:35] 2026-03-08 20:40:01,367 | INFO     | task id: 48955010
[2026-03-08 16:40:35] 2026-03-08 20:40:01,367 | INFO     | errors: (none)
[2026-03-08 16:40:35] 2026-03-08 20:40:01,367 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 16:40:35] 2026-03-08 20:40:01,367 | INFO     | pilot state: finished 
[2026-03-08 16:40:35] 2026-03-08 20:40:01,368 | INFO     | transexitcode: 0
[2026-03-08 16:40:35] 2026-03-08 20:40:01,368 | INFO     | exeerrorcode: 0
[2026-03-08 16:40:35] 2026-03-08 20:40:01,368 | INFO     | exeerrordiag: 
[2026-03-08 16:40:35] 2026-03-08 20:40:01,368 | INFO     | exitcode: 0
[2026-03-08 16:40:35] 2026-03-08 20:40:01,368 | INFO     | exitmsg: OK
[2026-03-08 16:40:35] 2026-03-08 20:40:01,368 | INFO     | cpuconsumptiontime: 68141 s
[2026-03-08 16:40:35] 2026-03-08 20:40:01,368 | INFO     | nevents: 400
[2026-03-08 16:40:35] 2026-03-08 20:40:01,368 | INFO     | neventsw: 0
[2026-03-08 16:40:35] 2026-03-08 20:40:01,368 | INFO     | pid: 15779
[2026-03-08 16:40:35] 2026-03-08 20:40:01,368 | INFO     | pgrp: 15779
[2026-03-08 16:40:35] 2026-03-08 20:40:01,368 | INFO     | corecount: 8
[2026-03-08 16:40:35] 2026-03-08 20:40:01,368 | INFO     | event service: False
[2026-03-08 16:40:35] 2026-03-08 20:40:01,369 | INFO     | sizes: {0: 2295692, 1: 2295780, 9042: 2323865, 9043: 2323864, 9044: 2333200}
[2026-03-08 16:40:35] 2026-03-08 20:40:01,369 | INFO     | --------------------------------------------------
[2026-03-08 16:40:35] 2026-03-08 20:40:01,369 | INFO     | 
[2026-03-08 16:40:35] 2026-03-08 20:40:01,369 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-08 16:40:35] 2026-03-08 20:40:01,387 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 16:40:35] 2026-03-08 20:40:01,387 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 16:40:35] 2026-03-08 20:40:01,387 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 16:40:35] 2026-03-08 20:40:01,387 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 16:40:35] 2026-03-08 20:40:01,388 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 16:40:35] 2026-03-08 20:40:01,388 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 16:40:35] 2026-03-08 20:40:01,388 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 16:40:35] 2026-03-08 20:40:01,388 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 16:40:35] 2026-03-08 20:40:01,388 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 16:40:35] 2026-03-08 20:40:01,388 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 16:40:35] 2026-03-08 20:40:01,388 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 16:40:35] 2026-03-08 20:40:01,388 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 16:40:35] 2026-03-08 20:40:01,388 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 16:40:35] 2026-03-08 20:40:01,388 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 16:40:35] 2026-03-08 20:40:01,388 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 16:40:35] 2026-03-08 20:40:01,389 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 16:40:35] 2026-03-08 20:40:01,389 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 16:40:35] 2026-03-08 20:40:01,389 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 16:40:35] 2026-03-08 20:40:01,389 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 16:40:35] 2026-03-08 20:40:01,389 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 16:40:35] 2026-03-08 20:40:01,389 | INFO     | job 7039864700 has completed (purged errors)
[2026-03-08 16:40:35] 2026-03-08 20:40:01,389 | INFO     | overall cleanup function is called
[2026-03-08 16:40:35] 2026-03-08 20:40:02,396 | INFO     | --- collectZombieJob: --- 10, [15779]
[2026-03-08 16:40:35] 2026-03-08 20:40:02,397 | INFO     | zombie collector waiting for pid 15779
[2026-03-08 16:40:35] 2026-03-08 20:40:02,397 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 16:40:35] 2026-03-08 20:40:02,397 | INFO     | collected zombie processes
[2026-03-08 16:40:35] 2026-03-08 20:40:02,397 | INFO     | will attempt to kill all subprocesses of pid=15779
[2026-03-08 16:40:35] 2026-03-08 20:40:02,606 | INFO     | process IDs to be killed: [15779] (in reverse order)
[2026-03-08 16:40:35] 2026-03-08 20:40:02,658 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 16:40:35] 2026-03-08 20:40:02,658 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 16:40:35] 2026-03-08 20:40:02,662 | INFO     | did not find any defunct processes belonging to 15779
[2026-03-08 16:40:35] 2026-03-08 20:40:02,666 | INFO     | did not find any defunct processes belonging to 15779
[2026-03-08 16:40:35] 2026-03-08 20:40:02,666 | INFO     | ready for new job
[2026-03-08 16:40:35] 2026-03-08 20:40:02,666 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 16:40:35] 2026-03-08 20:40:02,667 | INFO     | **************************************
[2026-03-08 16:40:35] 2026-03-08 20:40:02,667 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 16:40:35] 2026-03-08 20:40:02,667 | INFO     | **************************************
[2026-03-08 16:40:35] 2026-03-08 20:40:02,668 | INFO     | 
[2026-03-08 16:40:35] 2026-03-08 20:40:02,669 | INFO     | architecture information:
[2026-03-08 16:40:35] 2026-03-08 20:40:02,669 | INFO     | executing command: cat /etc/os-release
[2026-03-08 16:40:35] 2026-03-08 20:40:02,681 | INFO     | cat /etc/os-release:
[2026-03-08 16:40:35] NAME="CentOS Linux"
[2026-03-08 16:40:35] VERSION="7 (Core)"
[2026-03-08 16:40:35] ID="centos"
[2026-03-08 16:40:35] ID_LIKE="rhel fedora"
[2026-03-08 16:40:35] VERSION_ID="7"
[2026-03-08 16:40:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 16:40:35] ANSI_COLOR="0;31"
[2026-03-08 16:40:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 16:40:35] HOME_URL="https://www.centos.org/"
[2026-03-08 16:40:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 16:40:35] 
[2026-03-08 16:40:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 16:40:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 16:40:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 16:40:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 16:40:35] 
[2026-03-08 16:40:35] 2026-03-08 20:40:02,682 | INFO     | **************************************
[2026-03-08 16:40:35] 2026-03-08 20:40:03,185 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-08 16:40:35] 2026-03-08 20:40:03,202 | INFO     | sufficient remaining disk space (103184072704 B)
[2026-03-08 16:40:35] 2026-03-08 20:40:03,203 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 16:40:35] 2026-03-08 20:40:03,203 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 16:40:35] 2026-03-08 20:40:03,203 | INFO     | update_server=False
[2026-03-08 16:40:35] 2026-03-08 20:40:03,203 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 16:40:35] 2026-03-08 20:40:03,204 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 16:40:35] 2026-03-08 20:40:03,204 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 16:40:35] 2026-03-08 20:40:03,312 | INFO     | all job control threads have been joined
[2026-03-08 16:40:35] 2026-03-08 20:40:03,405 | INFO     | all data control threads have been joined
[2026-03-08 16:40:35] 2026-03-08 20:40:03,808 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 16:40:35] 2026-03-08 20:40:03,808 | INFO     | aborting loop
[2026-03-08 16:40:35] 2026-03-08 20:40:04,039 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 16:40:35] 2026-03-08 20:40:04,205 | INFO     | [job] queue monitor thread has finished
[2026-03-08 16:40:35] 2026-03-08 20:40:04,208 | INFO     | [job] retrieve thread has finished
[2026-03-08 16:40:35] 2026-03-08 20:40:04,318 | INFO     | [job] control thread has finished
[2026-03-08 16:40:35] 2026-03-08 20:40:04,410 | INFO     | [data] control thread has finished
[2026-03-08 16:40:35] 2026-03-08 20:40:04,482 | INFO     | all payload control threads have been joined
[2026-03-08 16:40:35] 2026-03-08 20:40:04,726 | INFO     | [job] validate thread has finished
[2026-03-08 16:40:35] 2026-03-08 20:40:04,809 | INFO     | [job] job monitor thread has finished
[2026-03-08 16:40:35] 2026-03-08 20:40:05,152 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 16:40:35] 2026-03-08 20:40:05,229 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 16:40:35] 2026-03-08 20:40:05,487 | INFO     | [payload] control thread has finished
[2026-03-08 16:40:35] 2026-03-08 20:40:05,498 | INFO     | [payload] failed_post thread has finished
[2026-03-08 16:40:35] 2026-03-08 20:40:05,607 | INFO     | [payload] validate_post thread has finished
[2026-03-08 16:40:35] 2026-03-08 20:40:05,642 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 16:40:35] 2026-03-08 20:40:05,646 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 16:40:35] 2026-03-08 20:40:05,671 | INFO     | [data] copytool_in thread has finished
[2026-03-08 16:40:35] 2026-03-08 20:40:06,045 | INFO     | [data] copytool_out thread has finished
[2026-03-08 16:40:35] 2026-03-08 20:40:07,210 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 16:40:35] 2026-03-08 20:40:30,339 | INFO     | [monitor] cgroup control has ended
[2026-03-08 16:40:35] 2026-03-08 20:40:30,456 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139702863529792)>', '<ExcThread(monitor, started 139702065690368)>']
[2026-03-08 16:40:35] 2026-03-08 20:40:33,197 | INFO     | PID=10032 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-08 16:40:35] 2026-03-08 20:40:33,197 | INFO     | .. there are 4 such processes running
[2026-03-08 16:40:35] 2026-03-08 20:40:33,197 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 16:40:35] 2026-03-08 20:40:33,197 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 16:40:35] 2026-03-08 20:40:33,197 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 16:40:35] 2026-03-08 20:40:33,197 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 16:40:35] 2026-03-08 20:40:33,198 | INFO     | [monitor] control thread has ended
[2026-03-08 16:40:35] 2026-03-08 20:40:35,478 | INFO     | all workflow threads have been joined
[2026-03-08 16:40:35] 2026-03-08 20:40:35,478 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 16:40:35] 2026-03-08 20:40:35,479 | INFO     | traces error code: 0
[2026-03-08 16:40:35] 2026-03-08 20:40:35,479 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 16:40:35] 2026-03-08 20:40:35,587 [wrapper] ==== pilot stdout END ====
[2026-03-08 16:40:35] 2026-03-08 20:40:35,602 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 16:40:35] 2026-03-08 20:40:35,604 [wrapper] pilotpid: 10032
[2026-03-08 16:40:35] 2026-03-08 20:40:35,607 [wrapper] Pilot exit status: 0
[2026-03-08 16:40:35] 2026-03-08 20:40:35,617 [wrapper] pandaids: 7039864700
[2026-03-08 16:40:35] 2026-03-08 20:40:35,659 [wrapper] cleanup supervisor_pilot 40010 10033
[2026-03-08 16:40:35] 2026-03-08 20:40:35,661 [wrapper] Test setup, not cleaning
[2026-03-08 16:40:35] 2026-03-08 20:40:35,664 [wrapper] apfmon messages muted
[2026-03-08 16:40:35] 2026-03-08 20:40:35,666 [wrapper] ==== wrapper stdout END ====
[2026-03-08 16:40:35] 2026-03-08 20:40:35,669 [wrapper] ==== wrapper stderr END ====
[2026-03-08 16:40:35]  *** Error codes and diagnostics ***
[2026-03-08 16:40:35]     "exeErrorCode": 0,
[2026-03-08 16:40:35]     "exeErrorDiag": "",
[2026-03-08 16:40:35]     "pilotErrorCode": 0,
[2026-03-08 16:40:35]     "pilotErrorDiag": "",
[2026-03-08 16:40:35]  *** Listing of results directory ***
[2026-03-08 16:40:35] total 617404
[2026-03-08 16:40:35] -rw-r--r-- 1 boincer umatlas    584627 Mar  8 09:03 pilot3.tar.gz
[2026-03-08 16:40:35] -rw-r--r-- 1 boincer umatlas      5111 Mar  8 09:03 queuedata.json
[2026-03-08 16:40:35] -rwx------ 1 boincer umatlas     36322 Mar  8 09:05 runpilot2-wrapper.sh
[2026-03-08 16:40:35] -rw-r--r-- 1 boincer umatlas       100 Mar  8 14:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 16:40:35] -rwxr-xr-x 1 boincer umatlas      7986 Mar  8 14:08 run_atlas
[2026-03-08 16:40:35] -rw-r--r-- 1 boincer umatlas       105 Mar  8 14:08 job.xml
[2026-03-08 16:40:35] -rw-r--r-- 2 boincer umatlas 439519220 Mar  8 14:08 EVNT.46701403._001298.pool.root.1
[2026-03-08 16:40:35] -rw-r--r-- 2 boincer umatlas     15845 Mar  8 14:08 start_atlas.sh
[2026-03-08 16:40:35] drwxrwx--x 2 boincer umatlas      4096 Mar  8 14:08 shared
[2026-03-08 16:40:35] -rw-r--r-- 2 boincer umatlas    597958 Mar  8 14:08 input.tar.gz
[2026-03-08 16:40:35] -rw-r--r-- 1 boincer umatlas         0 Mar  8 14:08 boinc_lockfile
[2026-03-08 16:40:35] -rw-r--r-- 1 boincer umatlas      2562 Mar  8 14:08 pandaJob.out
[2026-03-08 16:40:35] -rw------- 1 boincer umatlas        57 Mar  8 14:08 setup.sh.local
[2026-03-08 16:40:35] -rw------- 1 boincer umatlas    999212 Mar  8 14:09 agis_schedconf.cvmfs.json
[2026-03-08 16:40:35] -rw------- 1 boincer umatlas   1521291 Mar  8 14:09 agis_ddmendpoints.agis.ALL.json
[2026-03-08 16:40:35] -rw------- 1 boincer umatlas       437 Mar  8 14:09 workernode_map.json
[2026-03-08 16:40:35] drwx------ 5 boincer umatlas      4096 Mar  8 14:09 pilot3
[2026-03-08 16:40:35] -rw-r--r-- 1 boincer umatlas      6036 Mar  8 16:39 init_data.xml
[2026-03-08 16:40:35] -rw-r--r-- 1 boincer umatlas       530 Mar  8 16:39 boinc_task_state.xml
[2026-03-08 16:40:35] -rw------- 1 boincer umatlas 185438745 Mar  8 16:39 HITS.48955010._014880.pool.root.1
[2026-03-08 16:40:35] -rw------- 1 boincer umatlas        95 Mar  8 16:39 pilot_heartbeat.json
[2026-03-08 16:40:35] -rw------- 1 boincer umatlas      1049 Mar  8 16:39 memory_monitor_summary.json
[2026-03-08 16:40:35] -rw------- 1 boincer umatlas    387161 Mar  8 16:40 log.48955010._014880.job.log.tgz.1
[2026-03-08 16:40:35] -rw------- 1 boincer umatlas      6394 Mar  8 16:40 heartbeat.json
[2026-03-08 16:40:35] -rw-r--r-- 1 boincer umatlas      8192 Mar  8 16:40 boinc_mmap_file
[2026-03-08 16:40:35] -rw-r--r-- 1 boincer umatlas        27 Mar  8 16:40 wrapper_checkpoint.txt
[2026-03-08 16:40:35] -rw------- 1 boincer umatlas      4818 Mar  8 16:40 pilotlog.txt
[2026-03-08 16:40:35] -rw------- 1 boincer umatlas   1276390 Mar  8 16:40 log.48955010._014880.job.log.1
[2026-03-08 16:40:35] -rw------- 1 boincer umatlas       357 Mar  8 16:40 output.list
[2026-03-08 16:40:35] -rw-r--r-- 1 boincer umatlas       620 Mar  8 16:40 runtime_log
[2026-03-08 16:40:35] -rw------- 1 boincer umatlas   1679360 Mar  8 16:40 result.tar.gz
[2026-03-08 16:40:35] -rw-r--r-- 1 boincer umatlas      9331 Mar  8 16:40 runtime_log.err
[2026-03-08 16:40:35] -rw------- 1 boincer umatlas       656 Mar  8 16:40 g0GNDmpzSJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmYEZLDmdzt85n.diag
[2026-03-08 16:40:35] -rw-r--r-- 1 boincer umatlas     20997 Mar  8 16:40 stderr.txt
[2026-03-08 16:40:35] HITS file was successfully produced:
[2026-03-08 16:40:35] -rw------- 1 boincer umatlas 185438745 Mar  8 16:39 shared/HITS.pool.root.1
[2026-03-08 16:40:35]  *** Contents of shared directory: ***
[2026-03-08 16:40:35] total 612560
[2026-03-08 16:40:35] -rw-r--r-- 2 boincer umatlas 439519220 Mar  8 14:08 ATLAS.root_0
[2026-03-08 16:40:35] -rw-r--r-- 2 boincer umatlas     15845 Mar  8 14:08 start_atlas.sh
[2026-03-08 16:40:35] -rw-r--r-- 2 boincer umatlas    597958 Mar  8 14:08 input.tar.gz
[2026-03-08 16:40:35] -rw------- 1 boincer umatlas 185438745 Mar  8 16:39 HITS.pool.root.1
[2026-03-08 16:40:35] -rw------- 1 boincer umatlas   1679360 Mar  8 16:40 result.tar.gz
16:40:37 (4897): run_atlas exited; CPU time 68367.967645
16:40:37 (4897): called boinc_finish(0)

</stderr_txt>
]]>

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