Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:57:37 (32160): wrapper (7.7.26015): starting
12:57:37 (32160): wrapper: running run_atlas (--nthreads 12)
[2026-02-09 12:57:37] Arguments: --nthreads 12
[2026-02-09 12:57:37] Threads: 12
[2026-02-09 12:57:37] Checking for CVMFS
[2026-02-09 12:57:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-09 12:57:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-09 12:57:38] Running cvmfs_config stat atlas.cern.ch
[2026-02-09 12:57:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-09 12:57:38] 2.11.2.0 2925 396011 97480 156060 1 52 14320348 20275200 1 130560 1 170673351 99.950 23845601 17383 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-09 12:57:38] CVMFS is ok
[2026-02-09 12:57:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-09 12:57:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-09 12:57:38] Further information can be found at the LHC@home message board.
[2026-02-09 12:57:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-09 12:57:38] Checking for apptainer binary...
[2026-02-09 12:57:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-09 12:57:38] Running /usr/bin/apptainer --version
[2026-02-09 12:57:38] apptainer version 1.3.2-1.el7
[2026-02-09 12:57:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-09 12:57:39] c-205-9.aglt2.org
[2026-02-09 12:57:39] apptainer works
[2026-02-09 12:57:39] Set ATHENA_PROC_NUMBER=12
[2026-02-09 12:57:39] Set ATHENA_CORE_NUMBER=12
[2026-02-09 12:57:39] Starting ATLAS job with PandaID=6999411063
[2026-02-09 12:57:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-09 14:05:22]  *** The last 200 lines of the pilot log: ***
[2026-02-09 14:05:22]  is_tar=False
[2026-02-09 14:05:22]  lfn=log.48310749._006918.job.log.tgz.1
[2026-02-09 14:05:22]  mtime=0
[2026-02-09 14:05:22]  protocol_id=None
[2026-02-09 14:05:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-09 14:05:22]  replicas=None
[2026-02-09 14:05:22]  scope=mc23_13p6TeV
[2026-02-09 14:05:22]  status=None
[2026-02-09 14:05:22]  status_code=0
[2026-02-09 14:05:22]  storage_token=
[2026-02-09 14:05:22]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6999411063/log.48310749._006918.job.log.tgz.1
[2026-02-09 14:05:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e2/6d/log.48310749._006918.job.log.tgz.1
[2026-02-09 14:05:22]  workdir=None
[2026-02-09 14:05:22] ]
[2026-02-09 14:05:22] 2026-02-09 19:04:43,619 | INFO     | transferring file log.48310749._006918.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6999411063/log.48310749._006918.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-09 14:05:22] 2026-02-09 19:04:43,619 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6999411063/log.48310749._006918.job.log.tgz.1 /tmp/boinchome/slots/0/log.48310749._006918.job
[2026-02-09 14:05:22] 2026-02-09 19:04:43,642 | INFO     | adding to output.list: log.48310749._006918.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e2/6d/log.48310749._006918.job.log.tg
[2026-02-09 14:05:22] 2026-02-09 19:04:43,643 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-09 14:05:22] 2026-02-09 19:04:43,643 | INFO     | summary of transferred files:
[2026-02-09 14:05:22] 2026-02-09 19:04:43,643 | INFO     |  -- lfn=log.48310749._006918.job.log.tgz.1, status_code=0, status=transferred
[2026-02-09 14:05:22] 2026-02-09 19:04:43,644 | INFO     | stage-out finished correctly
[2026-02-09 14:05:22] 2026-02-09 19:04:43,768 | INFO     | monitor loop #306: job 0:6999411063 is in state 'finished'
[2026-02-09 14:05:22] 2026-02-09 19:04:43,768 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-09 14:05:22] 2026-02-09 19:04:44,984 | INFO     | time since job start (4004s) is within the limit (349056.0s)
[2026-02-09 14:05:22] 2026-02-09 19:04:46,271 | INFO     | monitor loop #307: job 0:6999411063 is in state 'finished'
[2026-02-09 14:05:22] 2026-02-09 19:04:46,272 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-09 14:05:22] 2026-02-09 19:04:46,989 | INFO     | time since job start (4006s) is within the limit (349056.0s)
[2026-02-09 14:05:22] 2026-02-09 19:04:47,173 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-09 14:05:22] 2026-02-09 19:04:48,775 | INFO     | monitor loop #308: job 0:6999411063 is in state 'finished'
[2026-02-09 14:05:22] 2026-02-09 19:04:48,775 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-09 14:05:22] 2026-02-09 19:04:48,996 | INFO     | time since job start (4008s) is within the limit (349056.0s)
[2026-02-09 14:05:22] 2026-02-09 19:04:49,839 | INFO     | job 6999411063 has state=finished
[2026-02-09 14:05:22] 2026-02-09 19:04:49,839 | INFO     | preparing for final server update for job 6999411063 in state='finished'
[2026-02-09 14:05:22] 2026-02-09 19:04:49,839 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6999411063/jobReport.json
[2026-02-09 14:05:22] 2026-02-09 19:04:49,842 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-09 14:05:22] 2026-02-09 19:04:49,843 | INFO     | this job has now completed (state=finished)
[2026-02-09 14:05:22] 2026-02-09 19:04:49,843 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-09 14:05:22] 2026-02-09 19:04:49,843 | INFO     | log transfer has been attempted: DONE
[2026-02-09 14:05:22] 2026-02-09 19:04:49,843 | INFO     | job 6999411063 has finished - writing final server update
[2026-02-09 14:05:22] 2026-02-09 19:04:49,844 | INFO     | total number of processed events: 400 (read)
[2026-02-09 14:05:22] 2026-02-09 19:04:49,846 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6999411063/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 14:05:22] 2026-02-09 19:04:49,847 | INFO     | extracted standard info from prmon json
[2026-02-09 14:05:22] 2026-02-09 19:04:49,847 | INFO     | extracted standard memory fields from prmon json
[2026-02-09 14:05:22] 2026-02-09 19:04:49,848 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-09 14:05:22] 2026-02-09 19:04:49,848 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-09 14:05:22] 2026-02-09 19:04:49,848 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-09 14:05:22] 2026-02-09 19:04:49,849 | INFO     | fitting pss+swap vs Time
[2026-02-09 14:05:22] 2026-02-09 19:04:49,849 | INFO     | sum of square deviations: 63666310.0
[2026-02-09 14:05:22] 2026-02-09 19:04:49,850 | INFO     | sum of deviations: -3282794788.0
[2026-02-09 14:05:22] 2026-02-09 19:04:49,850 | INFO     | mean x: 1770661978.0
[2026-02-09 14:05:22] 2026-02-09 19:04:49,850 | INFO     | mean y: 2715859.9830508474
[2026-02-09 14:05:22] 2026-02-09 19:04:49,850 | INFO     | intersect: 91302492974.25542
[2026-02-09 14:05:22] 2026-02-09 19:04:49,850 | INFO     | chi2: 0.06976472876585527
[2026-02-09 14:05:22] 2026-02-09 19:04:49,850 | INFO     | current memory leak: -51.56 B/s (using 59 data points, chi2=0.07)
[2026-02-09 14:05:22] 2026-02-09 19:04:49,851 | INFO     | could have reported an average CPU frequency of 1695 MHz (6 samples)
[2026-02-09 14:05:22] 2026-02-09 19:04:49,851 | INFO     | ..............................
[2026-02-09 14:05:22] 2026-02-09 19:04:49,851 | INFO     | . Timing measurements:
[2026-02-09 14:05:22] 2026-02-09 19:04:49,851 | INFO     | . get job = 0 s
[2026-02-09 14:05:22] 2026-02-09 19:04:49,851 | INFO     | . initial setup = 7 s
[2026-02-09 14:05:22] 2026-02-09 19:04:49,851 | INFO     | . payload setup = 7 s
[2026-02-09 14:05:22] 2026-02-09 19:04:49,851 | INFO     | . stage-in = 0 s
[2026-02-09 14:05:22] 2026-02-09 19:04:49,851 | INFO     | . payload execution = 3979 s
[2026-02-09 14:05:22] 2026-02-09 19:04:49,852 | INFO     | . stage-out = 0 s
[2026-02-09 14:05:22] 2026-02-09 19:04:49,852 | INFO     | . log creation = 0 s
[2026-02-09 14:05:22] 2026-02-09 19:04:49,852 | INFO     | ..............................
[2026-02-09 14:05:22] 2026-02-09 19:04:50,285 | INFO     | 
[2026-02-09 14:05:22] 2026-02-09 19:04:50,285 | INFO     | job summary report
[2026-02-09 14:05:22] 2026-02-09 19:04:50,285 | INFO     | --------------------------------------------------
[2026-02-09 14:05:22] 2026-02-09 19:04:50,285 | INFO     | PanDA job id: 6999411063
[2026-02-09 14:05:22] 2026-02-09 19:04:50,285 | INFO     | task id: 48310749
[2026-02-09 14:05:22] 2026-02-09 19:04:50,286 | INFO     | errors: (none)
[2026-02-09 14:05:22] 2026-02-09 19:04:50,286 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-09 14:05:22] 2026-02-09 19:04:50,286 | INFO     | pilot state: finished 
[2026-02-09 14:05:22] 2026-02-09 19:04:50,286 | INFO     | transexitcode: 0
[2026-02-09 14:05:22] 2026-02-09 19:04:50,286 | INFO     | exeerrorcode: 0
[2026-02-09 14:05:22] 2026-02-09 19:04:50,286 | INFO     | exeerrordiag: 
[2026-02-09 14:05:22] 2026-02-09 19:04:50,287 | INFO     | exitcode: 0
[2026-02-09 14:05:22] 2026-02-09 19:04:50,287 | INFO     | exitmsg: OK
[2026-02-09 14:05:22] 2026-02-09 19:04:50,287 | INFO     | cpuconsumptiontime: 41757 s
[2026-02-09 14:05:22] 2026-02-09 19:04:50,287 | INFO     | nevents: 400
[2026-02-09 14:05:22] 2026-02-09 19:04:50,287 | INFO     | neventsw: 0
[2026-02-09 14:05:22] 2026-02-09 19:04:50,287 | INFO     | pid: 8384
[2026-02-09 14:05:22] 2026-02-09 19:04:50,288 | INFO     | pgrp: 8384
[2026-02-09 14:05:22] 2026-02-09 19:04:50,288 | INFO     | corecount: 12
[2026-02-09 14:05:22] 2026-02-09 19:04:50,288 | INFO     | event service: False
[2026-02-09 14:05:22] 2026-02-09 19:04:50,288 | INFO     | sizes: {0: 2282833, 1: 2283039, 11: 2283067, 3990: 2308904, 3991: 2308903, 3992: 2317957, 3995: 2318141, 3998: 2318335}
[2026-02-09 14:05:22] 2026-02-09 19:04:50,288 | INFO     | --------------------------------------------------
[2026-02-09 14:05:22] 2026-02-09 19:04:50,288 | INFO     | 
[2026-02-09 14:05:22] 2026-02-09 19:04:50,288 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-09 14:05:22] 2026-02-09 19:04:50,320 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-09 14:05:22] 2026-02-09 19:04:50,320 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-09 14:05:22] 2026-02-09 19:04:50,320 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-09 14:05:22] 2026-02-09 19:04:50,320 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-09 14:05:22] 2026-02-09 19:04:50,321 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-09 14:05:22] 2026-02-09 19:04:50,321 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-09 14:05:22] 2026-02-09 19:04:50,321 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-09 14:05:22] 2026-02-09 19:04:50,321 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-09 14:05:22] 2026-02-09 19:04:50,321 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-09 14:05:22] 2026-02-09 19:04:50,322 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-09 14:05:22] 2026-02-09 19:04:50,322 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-09 14:05:22] 2026-02-09 19:04:50,322 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-09 14:05:22] 2026-02-09 19:04:50,322 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-09 14:05:22] 2026-02-09 19:04:50,322 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-09 14:05:22] 2026-02-09 19:04:50,322 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-09 14:05:22] 2026-02-09 19:04:50,323 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-09 14:05:22] 2026-02-09 19:04:50,323 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-09 14:05:22] 2026-02-09 19:04:50,323 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-09 14:05:22] 2026-02-09 19:04:50,323 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-09 14:05:22] 2026-02-09 19:04:50,323 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-09 14:05:22] 2026-02-09 19:04:50,323 | INFO     | job 6999411063 has completed (purged errors)
[2026-02-09 14:05:22] 2026-02-09 19:04:50,324 | INFO     | overall cleanup function is called
[2026-02-09 14:05:22] 2026-02-09 19:04:51,332 | INFO     | --- collectZombieJob: --- 10, [8384]
[2026-02-09 14:05:22] 2026-02-09 19:04:51,333 | INFO     | zombie collector waiting for pid 8384
[2026-02-09 14:05:22] 2026-02-09 19:04:51,333 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-09 14:05:22] 2026-02-09 19:04:51,333 | INFO     | collected zombie processes
[2026-02-09 14:05:22] 2026-02-09 19:04:51,333 | INFO     | will attempt to kill all subprocesses of pid=8384
[2026-02-09 14:05:22] 2026-02-09 19:04:51,420 | INFO     | process IDs to be killed: [8384] (in reverse order)
[2026-02-09 14:05:22] 2026-02-09 19:04:51,473 | WARNING  | found no corresponding commands to process id(s)
[2026-02-09 14:05:22] 2026-02-09 19:04:51,473 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-09 14:05:22] 2026-02-09 19:04:51,477 | INFO     | did not find any defunct processes belonging to 8384
[2026-02-09 14:05:22] 2026-02-09 19:04:51,480 | INFO     | did not find any defunct processes belonging to 8384
[2026-02-09 14:05:22] 2026-02-09 19:04:51,480 | INFO     | ready for new job
[2026-02-09 14:05:22] 2026-02-09 19:04:51,480 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-09 14:05:22] 2026-02-09 19:04:51,481 | INFO     | **************************************
[2026-02-09 14:05:22] 2026-02-09 19:04:51,481 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-09 14:05:22] 2026-02-09 19:04:51,481 | INFO     | **************************************
[2026-02-09 14:05:22] 2026-02-09 19:04:51,481 | INFO     | 
[2026-02-09 14:05:22] 2026-02-09 19:04:51,482 | INFO     | architecture information:
[2026-02-09 14:05:22] 2026-02-09 19:04:51,482 | INFO     | executing command: cat /etc/os-release
[2026-02-09 14:05:22] 2026-02-09 19:04:51,497 | INFO     | cat /etc/os-release:
[2026-02-09 14:05:22] NAME="CentOS Linux"
[2026-02-09 14:05:22] VERSION="7 (Core)"
[2026-02-09 14:05:22] ID="centos"
[2026-02-09 14:05:22] ID_LIKE="rhel fedora"
[2026-02-09 14:05:22] VERSION_ID="7"
[2026-02-09 14:05:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-09 14:05:22] ANSI_COLOR="0;31"
[2026-02-09 14:05:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-09 14:05:22] HOME_URL="https://www.centos.org/"
[2026-02-09 14:05:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-09 14:05:22] 
[2026-02-09 14:05:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-09 14:05:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-09 14:05:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-09 14:05:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-09 14:05:22] 
[2026-02-09 14:05:22] 2026-02-09 19:04:51,497 | INFO     | **************************************
[2026-02-09 14:05:22] 2026-02-09 19:04:52,000 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-09 14:05:22] 2026-02-09 19:04:52,017 | INFO     | sufficient remaining disk space (28808577024 B)
[2026-02-09 14:05:22] 2026-02-09 19:04:52,017 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-09 14:05:22] 2026-02-09 19:04:52,017 | INFO     | current server update state: UPDATING_FINAL
[2026-02-09 14:05:22] 2026-02-09 19:04:52,018 | INFO     | update_server=False
[2026-02-09 14:05:22] 2026-02-09 19:04:52,018 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-09 14:05:22] 2026-02-09 19:04:52,018 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-09 14:05:22] 2026-02-09 19:04:52,283 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-09 14:05:22] 2026-02-09 19:04:52,283 | INFO     | aborting loop
[2026-02-09 14:05:22] 2026-02-09 19:04:52,904 | INFO     | all data control threads have been joined
[2026-02-09 14:05:22] 2026-02-09 19:04:53,023 | INFO     | [job] retrieve thread has finished
[2026-02-09 14:05:22] 2026-02-09 19:04:53,195 | INFO     | [payload] validate_pre thread has finished
[2026-02-09 14:05:22] 2026-02-09 19:04:53,196 | INFO     | [job] create_data_payload thread has finished
[2026-02-09 14:05:22] 2026-02-09 19:04:53,255 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-09 14:05:22] 2026-02-09 19:04:53,289 | INFO     | [job] job monitor thread has finished
[2026-02-09 14:05:22] 2026-02-09 19:04:53,335 | INFO     | [data] copytool_in thread has finished
[2026-02-09 14:05:22] 2026-02-09 19:04:53,422 | INFO     | all payload control threads have been joined
[2026-02-09 14:05:22] 2026-02-09 19:04:53,443 | INFO     | [payload] validate_post thread has finished
[2026-02-09 14:05:22] 2026-02-09 19:04:53,709 | INFO     | [payload] execute_payloads thread has finished
[2026-02-09 14:05:22] 2026-02-09 19:04:53,720 | INFO     | all job control threads have been joined
[2026-02-09 14:05:22] 2026-02-09 19:04:53,910 | INFO     | [data] control thread has finished
[2026-02-09 14:05:22] 2026-02-09 19:04:54,024 | INFO     | [data] copytool_out thread has finished
[2026-02-09 14:05:22] 2026-02-09 19:04:54,415 | INFO     | [job] validate thread has finished
[2026-02-09 14:05:22] 2026-02-09 19:04:54,428 | INFO     | [payload] control thread has finished
[2026-02-09 14:05:22] 2026-02-09 19:04:54,471 | INFO     | [payload] failed_post thread has finished
[2026-02-09 14:05:22] 2026-02-09 19:04:54,726 | INFO     | [job] control thread has finished
[2026-02-09 14:05:22] 2026-02-09 19:04:54,936 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-09 14:05:22] 2026-02-09 19:04:55,941 | INFO     | [job] queue monitor thread has finished
[2026-02-09 14:05:22] 2026-02-09 19:04:57,261 | INFO     | [data] queue_monitor thread has finished
[2026-02-09 14:05:22] 2026-02-09 19:05:02,408 | INFO     | job.realtimelogging is not enabled
[2026-02-09 14:05:22] 2026-02-09 19:05:03,413 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-09 14:05:22] 2026-02-09 19:05:06,518 | INFO     | [monitor] cgroup control has ended
[2026-02-09 14:05:22] 2026-02-09 19:05:06,645 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139824649226048)>', '<ExcThread(monitor, started 139823952140032)>']
[2026-02-09 14:05:22] 2026-02-09 19:05:11,658 | INFO     | all workflow threads have been joined
[2026-02-09 14:05:22] 2026-02-09 19:05:11,658 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-09 14:05:22] 2026-02-09 19:05:11,659 | INFO     | traces error code: 0
[2026-02-09 14:05:22] 2026-02-09 19:05:11,659 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-09 14:05:22] 2026-02-09 19:05:22,200 | INFO     | PID=3960 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-09 14:05:22] 2026-02-09 19:05:22,200 | INFO     | found 0 job(s) in 20 queues
[2026-02-09 14:05:22] 2026-02-09 19:05:22,200 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-09 14:05:22] 2026-02-09 19:05:22,201 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-09 14:05:22] 2026-02-09 19:05:22,201 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-09 14:05:22] 2026-02-09 19:05:22,201 | INFO     | [monitor] control thread has ended
[2026-02-09 14:05:22] 2026-02-09 19:05:22,289 [wrapper] ==== pilot stdout END ====
[2026-02-09 14:05:22] 2026-02-09 19:05:22,293 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-09 14:05:22] 2026-02-09 19:05:22,296 [wrapper] pilotpid: 3960
[2026-02-09 14:05:22] 2026-02-09 19:05:22,300 [wrapper] Pilot exit status: 0
[2026-02-09 14:05:22] 2026-02-09 19:05:22,315 [wrapper] pandaids: 6999411063
[2026-02-09 14:05:22] 2026-02-09 19:05:22,353 [wrapper] cleanup supervisor_pilot 26918 3961
[2026-02-09 14:05:22] 2026-02-09 19:05:22,357 [wrapper] Test setup, not cleaning
[2026-02-09 14:05:22] 2026-02-09 19:05:22,362 [wrapper] apfmon messages muted
[2026-02-09 14:05:22] 2026-02-09 19:05:22,366 [wrapper] ==== wrapper stdout END ====
[2026-02-09 14:05:22] 2026-02-09 19:05:22,369 [wrapper] ==== wrapper stderr END ====
[2026-02-09 14:05:22]  *** Error codes and diagnostics ***
[2026-02-09 14:05:22]     "exeErrorCode": 0,
[2026-02-09 14:05:22]     "exeErrorDiag": "",
[2026-02-09 14:05:22]     "pilotErrorCode": 0,
[2026-02-09 14:05:22]     "pilotErrorDiag": "",
[2026-02-09 14:05:22]  *** Listing of results directory ***
[2026-02-09 14:05:22] total 662268
[2026-02-09 14:05:22] -rw-r--r-- 1 boincer umatlas    584627 Feb  6 22:47 pilot3.tar.gz
[2026-02-09 14:05:22] -rwx------ 1 boincer umatlas     36322 Feb  6 22:48 runpilot2-wrapper.sh
[2026-02-09 14:05:22] -rw-r--r-- 1 boincer umatlas      5111 Feb  6 22:48 queuedata.json
[2026-02-09 14:05:22] -rw-r--r-- 1 boincer umatlas       100 Feb  9 12:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-09 14:05:22] -rwxr-xr-x 1 boincer umatlas      7986 Feb  9 12:57 run_atlas
[2026-02-09 14:05:22] -rw-r--r-- 1 boincer umatlas       105 Feb  9 12:57 job.xml
[2026-02-09 14:05:22] -rw-r--r-- 2 boincer umatlas 493209108 Feb  9 12:57 EVNT.48310747._000130.pool.root.1
[2026-02-09 14:05:22] drwxrwx--x 2 boincer umatlas      4096 Feb  9 12:57 shared
[2026-02-09 14:05:22] -rw-r--r-- 2 boincer umatlas    597957 Feb  9 12:57 input.tar.gz
[2026-02-09 14:05:22] -rw-r--r-- 2 boincer umatlas     15845 Feb  9 12:57 start_atlas.sh
[2026-02-09 14:05:22] -rw-r--r-- 1 boincer umatlas         0 Feb  9 12:57 boinc_lockfile
[2026-02-09 14:05:22] -rw-r--r-- 1 boincer umatlas      2523 Feb  9 12:57 pandaJob.out
[2026-02-09 14:05:22] -rw------- 1 boincer umatlas        57 Feb  9 12:57 setup.sh.local
[2026-02-09 14:05:22] -rw------- 1 boincer umatlas   1009496 Feb  9 12:57 agis_schedconf.cvmfs.json
[2026-02-09 14:05:22] -rw------- 1 boincer umatlas   1513144 Feb  9 12:57 agis_ddmendpoints.agis.ALL.json
[2026-02-09 14:05:22] -rw------- 1 boincer umatlas       444 Feb  9 12:57 workernode_map.json
[2026-02-09 14:05:22] drwx------ 5 boincer umatlas      4096 Feb  9 12:58 pilot3
[2026-02-09 14:05:22] -rw-r--r-- 1 boincer umatlas      5952 Feb  9 14:01 init_data.xml
[2026-02-09 14:05:22] -rw------- 1 boincer umatlas 179025543 Feb  9 14:04 HITS.48310749._006918.pool.root.1
[2026-02-09 14:05:22] -rw------- 1 boincer umatlas      1045 Feb  9 14:04 memory_monitor_summary.json
[2026-02-09 14:05:22] -rw-r--r-- 1 boincer umatlas       530 Feb  9 14:04 boinc_task_state.xml
[2026-02-09 14:05:22] -rw------- 1 boincer umatlas    403017 Feb  9 14:04 log.48310749._006918.job.log.tgz.1
[2026-02-09 14:05:22] -rw------- 1 boincer umatlas        95 Feb  9 14:04 pilot_heartbeat.json
[2026-02-09 14:05:22] -rw------- 1 boincer umatlas      6416 Feb  9 14:04 heartbeat.json
[2026-02-09 14:05:22] -rw-r--r-- 1 boincer umatlas      8192 Feb  9 14:05 boinc_mmap_file
[2026-02-09 14:05:22] -rw-r--r-- 1 boincer umatlas        27 Feb  9 14:05 wrapper_checkpoint.txt
[2026-02-09 14:05:22] -rw------- 1 boincer umatlas       744 Feb  9 14:05 pilotlog.txt
[2026-02-09 14:05:22] -rw------- 1 boincer umatlas    589074 Feb  9 14:05 log.48310749._006918.job.log.1
[2026-02-09 14:05:22] -rw------- 1 boincer umatlas       357 Feb  9 14:05 output.list
[2026-02-09 14:05:22] -rw-r--r-- 1 boincer umatlas       620 Feb  9 14:05 runtime_log
[2026-02-09 14:05:22] -rw------- 1 boincer umatlas   1013760 Feb  9 14:05 result.tar.gz
[2026-02-09 14:05:22] -rw-r--r-- 1 boincer umatlas      9338 Feb  9 14:05 runtime_log.err
[2026-02-09 14:05:22] -rw------- 1 boincer umatlas       658 Feb  9 14:05 alPNDmnTo88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmRRaKDm42JJJm.diag
[2026-02-09 14:05:22] -rw-r--r-- 1 boincer umatlas     21574 Feb  9 14:05 stderr.txt
[2026-02-09 14:05:22] HITS file was successfully produced:
[2026-02-09 14:05:22] -rw------- 1 boincer umatlas 179025543 Feb  9 14:04 shared/HITS.pool.root.1
[2026-02-09 14:05:22]  *** Contents of shared directory: ***
[2026-02-09 14:05:22] total 658080
[2026-02-09 14:05:22] -rw-r--r-- 2 boincer umatlas 493209108 Feb  9 12:57 ATLAS.root_0
[2026-02-09 14:05:22] -rw-r--r-- 2 boincer umatlas    597957 Feb  9 12:57 input.tar.gz
[2026-02-09 14:05:22] -rw-r--r-- 2 boincer umatlas     15845 Feb  9 12:57 start_atlas.sh
[2026-02-09 14:05:22] -rw------- 1 boincer umatlas 179025543 Feb  9 14:04 HITS.pool.root.1
[2026-02-09 14:05:22] -rw------- 1 boincer umatlas   1013760 Feb  9 14:05 result.tar.gz
14:05:24 (32160): run_atlas exited; CPU time 41738.309617
14:05:24 (32160): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN