Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:31:07 (1781521): wrapper (7.7.26015): starting
03:31:07 (1781521): wrapper: running run_atlas (--nthreads 8)
[2026-02-04 03:31:07] Arguments: --nthreads 8
[2026-02-04 03:31:07] Threads: 8
[2026-02-04 03:31:07] Checking for CVMFS
[2026-02-04 03:31:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-04 03:31:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-04 03:31:09] Running cvmfs_config stat atlas.cern.ch
[2026-02-04 03:31:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-04 03:31:10] 2.13.3.0 12210 59481 173092 155861 0 360 38743643 40960001 30005 16776704 0 424459148 99.753 279137810 46467 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-04 03:31:10] CVMFS is ok
[2026-02-04 03:31:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-04 03:31:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-04 03:31:10] Further information can be found at the LHC@home message board.
[2026-02-04 03:31:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 03:31:10] Checking for apptainer binary...
[2026-02-04 03:31:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-04 03:31:10] Running /usr/bin/apptainer --version
[2026-02-04 03:31:11] apptainer version 1.4.5-2.el9
[2026-02-04 03:31:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 03:31:11] c-208-37.aglt2.org
[2026-02-04 03:31:11] apptainer works
[2026-02-04 03:31:11] Set ATHENA_PROC_NUMBER=8
[2026-02-04 03:31:11] Set ATHENA_CORE_NUMBER=8
[2026-02-04 03:31:11] Starting ATLAS job with PandaID=6984228839
[2026-02-04 03:31:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 04:59:33]  *** The last 200 lines of the pilot log: ***
[2026-02-04 04:59:33]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-04 04:59:33]  is_altstaged=None
[2026-02-04 04:59:33]  is_tar=False
[2026-02-04 04:59:33]  lfn=log.48317952._001303.job.log.tgz.1
[2026-02-04 04:59:33]  mtime=0
[2026-02-04 04:59:33]  protocol_id=None
[2026-02-04 04:59:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-04 04:59:33]  replicas=None
[2026-02-04 04:59:33]  scope=mc23_13p6TeV
[2026-02-04 04:59:33]  status=None
[2026-02-04 04:59:33]  status_code=0
[2026-02-04 04:59:33]  storage_token=
[2026-02-04 04:59:33]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6984228839/log.48317952._001303.job.log.tgz.1
[2026-02-04 04:59:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a0/d9/log.48317952._001303.job.log.tgz.1
[2026-02-04 04:59:33]  workdir=None
[2026-02-04 04:59:33] ]
[2026-02-04 04:59:33] 2026-02-04 09:58:56,670 | INFO     | transferring file log.48317952._001303.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6984228839/log.48317952._001303.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-04 04:59:33] 2026-02-04 09:58:56,671 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6984228839/log.48317952._001303.job.log.tgz.1 /tmp/boinchome/slots/1/log.48317952._001303.job
[2026-02-04 04:59:33] 2026-02-04 09:58:56,698 | INFO     | adding to output.list: log.48317952._001303.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a0/d9/log.48317952._001303.job.log.tg
[2026-02-04 04:59:33] 2026-02-04 09:58:56,701 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-04 04:59:33] 2026-02-04 09:58:56,701 | INFO     | summary of transferred files:
[2026-02-04 04:59:33] 2026-02-04 09:58:56,702 | INFO     |  -- lfn=log.48317952._001303.job.log.tgz.1, status_code=0, status=transferred
[2026-02-04 04:59:33] 2026-02-04 09:58:56,702 | INFO     | stage-out finished correctly
[2026-02-04 04:59:33] 2026-02-04 09:58:56,818 | INFO     | monitor loop #351: job 0:6984228839 is in state 'finished'
[2026-02-04 04:59:33] 2026-02-04 09:58:56,818 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-04 04:59:33] 2026-02-04 09:58:57,226 | INFO     | PID=1794151 has CPU usage=12.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-04 04:59:33] 2026-02-04 09:58:57,226 | INFO     | .. there are 28 such processes running
[2026-02-04 04:59:33] 2026-02-04 09:58:57,799 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-04 04:59:33] 2026-02-04 09:58:57,931 | INFO     | job 6984228839 has state=finished
[2026-02-04 04:59:33] 2026-02-04 09:58:57,931 | INFO     | preparing for final server update for job 6984228839 in state='finished'
[2026-02-04 04:59:33] 2026-02-04 09:58:58,116 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-02-04 04:59:33] 2026-02-04 09:58:58,116 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-6984228839/jobReport.json
[2026-02-04 04:59:33] 2026-02-04 09:58:58,117 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-02-04 04:59:33] 2026-02-04 09:58:58,118 | INFO     | this job has now completed (state=finished)
[2026-02-04 04:59:33] 2026-02-04 09:58:58,118 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-04 04:59:33] 2026-02-04 09:58:58,118 | INFO     | log transfer has been attempted: DONE
[2026-02-04 04:59:33] 2026-02-04 09:58:58,118 | INFO     | job 6984228839 has finished - writing final server update
[2026-02-04 04:59:33] 2026-02-04 09:58:58,124 | INFO     | total number of processed events: 400 (read)
[2026-02-04 04:59:33] 2026-02-04 09:58:58,136 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6984228839/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 04:59:33] 2026-02-04 09:58:58,136 | INFO     | extracted standard info from prmon json
[2026-02-04 04:59:33] 2026-02-04 09:58:58,136 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 04:59:33] 2026-02-04 09:58:58,136 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 04:59:33] 2026-02-04 09:58:58,136 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 04:59:33] 2026-02-04 09:58:58,136 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 04:59:33] 2026-02-04 09:58:58,137 | INFO     | fitting pss+swap vs Time
[2026-02-04 04:59:33] 2026-02-04 09:58:58,138 | INFO     | sum of square deviations: 136102350.6710525
[2026-02-04 04:59:33] 2026-02-04 09:58:58,138 | INFO     | sum of deviations: -1939900889.2105253
[2026-02-04 04:59:33] 2026-02-04 09:58:58,138 | INFO     | mean x: 1770196685.5657895
[2026-02-04 04:59:33] 2026-02-04 09:58:58,138 | INFO     | mean y: 2544325.8421052634
[2026-02-04 04:59:33] 2026-02-04 09:58:58,138 | INFO     | intersect: 25233601008.369896
[2026-02-04 04:59:33] 2026-02-04 09:58:58,138 | INFO     | chi2: 0.09377086537965312
[2026-02-04 04:59:33] 2026-02-04 09:58:58,138 | INFO     | current memory leak: -14.25 B/s (using 76 data points, chi2=0.09)
[2026-02-04 04:59:33] 2026-02-04 09:58:58,138 | INFO     | could have reported an average CPU frequency of 3792 MHz (6 samples)
[2026-02-04 04:59:33] 2026-02-04 09:58:58,138 | INFO     | ..............................
[2026-02-04 04:59:33] 2026-02-04 09:58:58,138 | INFO     | . Timing measurements:
[2026-02-04 04:59:33] 2026-02-04 09:58:58,138 | INFO     | . get job = 0 s
[2026-02-04 04:59:33] 2026-02-04 09:58:58,138 | INFO     | . initial setup = 43 s
[2026-02-04 04:59:33] 2026-02-04 09:58:58,138 | INFO     | . payload setup = 51 s
[2026-02-04 04:59:33] 2026-02-04 09:58:58,138 | INFO     | . stage-in = 0 s
[2026-02-04 04:59:33] 2026-02-04 09:58:58,138 | INFO     | . payload execution = 5069 s
[2026-02-04 04:59:33] 2026-02-04 09:58:58,138 | INFO     | . stage-out = 2 s
[2026-02-04 04:59:33] 2026-02-04 09:58:58,139 | INFO     | . log creation = 0 s
[2026-02-04 04:59:33] 2026-02-04 09:58:58,139 | INFO     | ..............................
[2026-02-04 04:59:33] 2026-02-04 09:58:58,193 | INFO     | 
[2026-02-04 04:59:33] 2026-02-04 09:58:58,194 | INFO     | job summary report
[2026-02-04 04:59:33] 2026-02-04 09:58:58,194 | INFO     | --------------------------------------------------
[2026-02-04 04:59:33] 2026-02-04 09:58:58,194 | INFO     | PanDA job id: 6984228839
[2026-02-04 04:59:33] 2026-02-04 09:58:58,194 | INFO     | task id: 48317952
[2026-02-04 04:59:33] 2026-02-04 09:58:58,194 | INFO     | errors: (none)
[2026-02-04 04:59:33] 2026-02-04 09:58:58,194 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 04:59:33] 2026-02-04 09:58:58,194 | INFO     | pilot state: finished 
[2026-02-04 04:59:33] 2026-02-04 09:58:58,194 | INFO     | transexitcode: 0
[2026-02-04 04:59:33] 2026-02-04 09:58:58,195 | INFO     | exeerrorcode: 0
[2026-02-04 04:59:33] 2026-02-04 09:58:58,195 | INFO     | exeerrordiag: 
[2026-02-04 04:59:33] 2026-02-04 09:58:58,195 | INFO     | exitcode: 0
[2026-02-04 04:59:33] 2026-02-04 09:58:58,195 | INFO     | exitmsg: OK
[2026-02-04 04:59:33] 2026-02-04 09:58:58,195 | INFO     | cpuconsumptiontime: 24574 s
[2026-02-04 04:59:33] 2026-02-04 09:58:58,195 | INFO     | nevents: 400
[2026-02-04 04:59:33] 2026-02-04 09:58:58,195 | INFO     | neventsw: 0
[2026-02-04 04:59:33] 2026-02-04 09:58:58,195 | INFO     | pid: 1825813
[2026-02-04 04:59:33] 2026-02-04 09:58:58,195 | INFO     | pgrp: 1825813
[2026-02-04 04:59:33] 2026-02-04 09:58:58,195 | INFO     | corecount: 8
[2026-02-04 04:59:33] 2026-02-04 09:58:58,195 | INFO     | event service: False
[2026-02-04 04:59:33] 2026-02-04 09:58:58,195 | INFO     | sizes: {0: 2277835, 1: 2278296, 12: 2278296, 5125: 2304703, 5128: 2313701, 5129: 2313757, 5130: 2314079}
[2026-02-04 04:59:33] 2026-02-04 09:58:58,195 | INFO     | --------------------------------------------------
[2026-02-04 04:59:33] 2026-02-04 09:58:58,195 | INFO     | 
[2026-02-04 04:59:33] 2026-02-04 09:58:58,195 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-02-04 04:59:33] 2026-02-04 09:58:58,228 | INFO     | time since job start (5142s) is within the limit (349056.0s)
[2026-02-04 04:59:33] 2026-02-04 09:58:58,293 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 04:59:33] 2026-02-04 09:58:58,293 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 04:59:33] 2026-02-04 09:58:58,294 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 04:59:33] 2026-02-04 09:58:58,294 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 04:59:33] 2026-02-04 09:58:58,294 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 04:59:33] 2026-02-04 09:58:58,294 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 04:59:33] 2026-02-04 09:58:58,294 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 04:59:33] 2026-02-04 09:58:58,294 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 04:59:33] 2026-02-04 09:58:58,294 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 04:59:33] 2026-02-04 09:58:58,294 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 04:59:33] 2026-02-04 09:58:58,294 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 04:59:33] 2026-02-04 09:58:58,294 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 04:59:33] 2026-02-04 09:58:58,294 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 04:59:33] 2026-02-04 09:58:58,294 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 04:59:33] 2026-02-04 09:58:58,294 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 04:59:33] 2026-02-04 09:58:58,294 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 04:59:33] 2026-02-04 09:58:58,294 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 04:59:33] 2026-02-04 09:58:58,294 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 04:59:33] 2026-02-04 09:58:58,294 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 04:59:33] 2026-02-04 09:58:58,294 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 04:59:33] 2026-02-04 09:58:58,294 | INFO     | job 6984228839 has completed (purged errors)
[2026-02-04 04:59:33] 2026-02-04 09:58:58,294 | INFO     | overall cleanup function is called
[2026-02-04 04:59:33] 2026-02-04 09:58:59,302 | INFO     | --- collectZombieJob: --- 10, [1825813]
[2026-02-04 04:59:33] 2026-02-04 09:58:59,302 | INFO     | zombie collector waiting for pid 1825813
[2026-02-04 04:59:33] 2026-02-04 09:58:59,302 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 04:59:33] 2026-02-04 09:58:59,302 | INFO     | collected zombie processes
[2026-02-04 04:59:33] 2026-02-04 09:58:59,302 | INFO     | will attempt to kill all subprocesses of pid=1825813
[2026-02-04 04:59:33] 2026-02-04 09:59:00,191 | INFO     | process IDs to be killed: [1825813] (in reverse order)
[2026-02-04 04:59:33] 2026-02-04 09:59:00,498 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 04:59:33] 2026-02-04 09:59:00,498 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 04:59:33] 2026-02-04 09:59:00,520 | INFO     | did not find any defunct processes belonging to 1825813
[2026-02-04 04:59:33] 2026-02-04 09:59:00,540 | INFO     | did not find any defunct processes belonging to 1825813
[2026-02-04 04:59:33] 2026-02-04 09:59:00,540 | INFO     | ready for new job
[2026-02-04 04:59:33] 2026-02-04 09:59:00,540 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 04:59:33] 2026-02-04 09:59:00,542 | INFO     | **************************************
[2026-02-04 04:59:33] 2026-02-04 09:59:00,542 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 04:59:33] 2026-02-04 09:59:00,542 | INFO     | **************************************
[2026-02-04 04:59:33] 2026-02-04 09:59:00,542 | INFO     | 
[2026-02-04 04:59:33] 2026-02-04 09:59:00,600 | INFO     | architecture information:
[2026-02-04 04:59:33] 2026-02-04 09:59:00,601 | INFO     | executing command: cat /etc/os-release
[2026-02-04 04:59:33] 2026-02-04 09:59:00,683 | INFO     | cat /etc/os-release:
[2026-02-04 04:59:33] NAME="CentOS Linux"
[2026-02-04 04:59:33] VERSION="7 (Core)"
[2026-02-04 04:59:33] ID="centos"
[2026-02-04 04:59:33] ID_LIKE="rhel fedora"
[2026-02-04 04:59:33] VERSION_ID="7"
[2026-02-04 04:59:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 04:59:33] ANSI_COLOR="0;31"
[2026-02-04 04:59:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 04:59:33] HOME_URL="https://www.centos.org/"
[2026-02-04 04:59:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 04:59:33] 
[2026-02-04 04:59:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 04:59:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 04:59:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 04:59:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 04:59:33] 
[2026-02-04 04:59:33] 2026-02-04 09:59:00,684 | INFO     | **************************************
[2026-02-04 04:59:33] 2026-02-04 09:59:01,188 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-02-04 04:59:33] 2026-02-04 09:59:01,231 | INFO     | sufficient remaining disk space (169681616896 B)
[2026-02-04 04:59:33] 2026-02-04 09:59:01,231 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 04:59:33] 2026-02-04 09:59:01,231 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 04:59:33] 2026-02-04 09:59:01,231 | INFO     | update_server=False
[2026-02-04 04:59:33] 2026-02-04 09:59:01,231 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 04:59:33] 2026-02-04 09:59:01,243 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 04:59:33] 2026-02-04 09:59:01,243 | INFO     | aborting loop
[2026-02-04 04:59:33] 2026-02-04 09:59:01,625 | INFO     | all data control threads have been joined
[2026-02-04 04:59:33] 2026-02-04 09:59:02,081 | INFO     | all payload control threads have been joined
[2026-02-04 04:59:33] 2026-02-04 09:59:02,237 | INFO     | [job] retrieve thread has finished
[2026-02-04 04:59:33] 2026-02-04 09:59:02,263 | INFO     | [job] job monitor thread has finished
[2026-02-04 04:59:33] 2026-02-04 09:59:02,316 | INFO     | [data] copytool_in thread has finished
[2026-02-04 04:59:33] 2026-02-04 09:59:02,359 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 04:59:33] 2026-02-04 09:59:02,372 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 04:59:33] 2026-02-04 09:59:02,372 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 04:59:33] 2026-02-04 09:59:02,541 | INFO     | all job control threads have been joined
[2026-02-04 04:59:33] 2026-02-04 09:59:02,564 | INFO     | [payload] validate_post thread has finished
[2026-02-04 04:59:33] 2026-02-04 09:59:02,632 | INFO     | [data] control thread has finished
[2026-02-04 04:59:33] 2026-02-04 09:59:02,662 | INFO     | [job] validate thread has finished
[2026-02-04 04:59:33] 2026-02-04 09:59:03,087 | INFO     | [payload] control thread has finished
[2026-02-04 04:59:33] 2026-02-04 09:59:03,209 | INFO     | [payload] failed_post thread has finished
[2026-02-04 04:59:33] 2026-02-04 09:59:03,277 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 04:59:33] 2026-02-04 09:59:03,377 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 04:59:33] 2026-02-04 09:59:03,547 | INFO     | [job] control thread has finished
[2026-02-04 04:59:33] 2026-02-04 09:59:03,983 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 04:59:33] 2026-02-04 09:59:04,283 | INFO     | [job] queue monitor thread has finished
[2026-02-04 04:59:33] 2026-02-04 09:59:04,394 | INFO     | [data] copytool_out thread has finished
[2026-02-04 04:59:33] 2026-02-04 09:59:07,992 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 04:59:33] 2026-02-04 09:59:11,564 | INFO     | job.realtimelogging is not enabled
[2026-02-04 04:59:33] 2026-02-04 09:59:12,579 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 04:59:33] 2026-02-04 09:59:24,094 | INFO     | [monitor] cgroup control has ended
[2026-02-04 04:59:33] 2026-02-04 09:59:24,260 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139724971157312)>', '<ExcThread(monitor, started 139724572305152)>']
[2026-02-04 04:59:33] 2026-02-04 09:59:29,285 | INFO     | all workflow threads have been joined
[2026-02-04 04:59:33] 2026-02-04 09:59:29,285 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 04:59:33] 2026-02-04 09:59:29,304 | INFO     | traces error code: 0
[2026-02-04 04:59:33] 2026-02-04 09:59:29,304 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 04:59:33] 2026-02-04 09:59:31,950 | INFO     | PID=1794151 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-04 04:59:33] 2026-02-04 09:59:31,951 | INFO     | .. there are 28 such processes running
[2026-02-04 04:59:33] 2026-02-04 09:59:31,951 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 04:59:33] 2026-02-04 09:59:31,951 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 04:59:33] 2026-02-04 09:59:31,951 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 04:59:33] 2026-02-04 09:59:31,951 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 04:59:33] 2026-02-04 09:59:31,951 | INFO     | [monitor] control thread has ended
[2026-02-04 04:59:33] 2026-02-04 09:59:32,156 [wrapper] ==== pilot stdout END ====
[2026-02-04 04:59:33] 2026-02-04 09:59:32,167 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 04:59:33] 2026-02-04 09:59:32,184 [wrapper] pilotpid: 1794151
[2026-02-04 04:59:33] 2026-02-04 09:59:32,196 [wrapper] Pilot exit status: 0
[2026-02-04 04:59:33] 2026-02-04 09:59:32,315 [wrapper] pandaids: 6984228839
[2026-02-04 04:59:33] 2026-02-04 09:59:32,503 [wrapper] cleanup supervisor_pilot 2503516 1794152
[2026-02-04 04:59:33] 2026-02-04 09:59:32,542 [wrapper] Test setup, not cleaning
[2026-02-04 04:59:33] 2026-02-04 09:59:32,601 [wrapper] apfmon messages muted
[2026-02-04 04:59:33] 2026-02-04 09:59:32,640 [wrapper] ==== wrapper stdout END ====
[2026-02-04 04:59:33] 2026-02-04 09:59:32,666 [wrapper] ==== wrapper stderr END ====
[2026-02-04 04:59:33]  *** Error codes and diagnostics ***
[2026-02-04 04:59:33]     "exeErrorCode": 0,
[2026-02-04 04:59:33]     "exeErrorDiag": "",
[2026-02-04 04:59:33]     "pilotErrorCode": 0,
[2026-02-04 04:59:33]     "pilotErrorDiag": "",
[2026-02-04 04:59:33]  *** Listing of results directory ***
[2026-02-04 04:59:33] total 672848
[2026-02-04 04:59:33] -rw-r--r--. 1 boincer umatlas    584422 Jan 26 06:54 pilot3.tar.gz
[2026-02-04 04:59:33] -rwx------. 1 boincer umatlas     36322 Jan 26 06:57 runpilot2-wrapper.sh
[2026-02-04 04:59:33] -rw-r--r--. 1 boincer umatlas      5111 Jan 26 07:00 queuedata.json
[2026-02-04 04:59:33] -rw-r--r--. 1 boincer umatlas       100 Feb  4 03:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 04:59:33] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  4 03:31 run_atlas
[2026-02-04 04:59:33] -rw-r--r--. 1 boincer umatlas       105 Feb  4 03:31 job.xml
[2026-02-04 04:59:33] -rw-r--r--. 2 boincer umatlas 500139448 Feb  4 03:31 EVNT.48317949._000026.pool.root.1
[2026-02-04 04:59:33] -rw-r--r--. 2 boincer umatlas     15845 Feb  4 03:31 start_atlas.sh
[2026-02-04 04:59:33] drwxrwx--x. 2 boincer umatlas      4096 Feb  4 03:31 shared
[2026-02-04 04:59:33] -rw-r--r--. 2 boincer umatlas    597757 Feb  4 03:31 input.tar.gz
[2026-02-04 04:59:33] -rw-r--r--. 1 boincer umatlas         0 Feb  4 03:31 boinc_lockfile
[2026-02-04 04:59:33] -rw-r--r--. 1 boincer umatlas      2519 Feb  4 03:31 pandaJob.out
[2026-02-04 04:59:33] -rw-------. 1 boincer umatlas        57 Feb  4 03:31 setup.sh.local
[2026-02-04 04:59:33] -rw-------. 1 boincer umatlas   1009244 Feb  4 03:32 agis_schedconf.cvmfs.json
[2026-02-04 04:59:33] -rw-------. 1 boincer umatlas   1511668 Feb  4 03:32 agis_ddmendpoints.agis.ALL.json
[2026-02-04 04:59:33] -rw-------. 1 boincer umatlas       432 Feb  4 03:33 workernode_map.json
[2026-02-04 04:59:33] drwx------. 5 boincer umatlas      4096 Feb  4 03:33 pilot3
[2026-02-04 04:59:33] -rw-r--r--. 1 boincer umatlas      7185 Feb  4 04:56 init_data.xml
[2026-02-04 04:59:33] -rw-------. 1 boincer umatlas 182799711 Feb  4 04:57 HITS.48317952._001303.pool.root.1
[2026-02-04 04:59:33] -rw-r--r--. 1 boincer umatlas       530 Feb  4 04:57 boinc_task_state.xml
[2026-02-04 04:59:33] -rw-------. 1 boincer umatlas      1046 Feb  4 04:58 memory_monitor_summary.json
[2026-02-04 04:59:33] -rw-------. 1 boincer umatlas    354451 Feb  4 04:58 log.48317952._001303.job.log.tgz.1
[2026-02-04 04:59:33] -rw-------. 1 boincer umatlas      6363 Feb  4 04:58 heartbeat.json
[2026-02-04 04:59:33] -rw-------. 1 boincer umatlas       823 Feb  4 04:59 pilotlog.txt
[2026-02-04 04:59:33] -rw-------. 1 boincer umatlas        95 Feb  4 04:59 pilot_heartbeat.json
[2026-02-04 04:59:33] -rw-r--r--. 1 boincer umatlas      8192 Feb  4 04:59 boinc_mmap_file
[2026-02-04 04:59:33] -rw-r--r--. 1 boincer umatlas        27 Feb  4 04:59 wrapper_checkpoint.txt
[2026-02-04 04:59:33] -rw-------. 1 boincer umatlas    706431 Feb  4 04:59 log.48317952._001303.job.log.1
[2026-02-04 04:59:33] -rw-------. 1 boincer umatlas       357 Feb  4 04:59 output.list
[2026-02-04 04:59:33] -rw-r--r--. 1 boincer umatlas       620 Feb  4 04:59 runtime_log
[2026-02-04 04:59:33] -rw-------. 1 boincer umatlas   1075200 Feb  4 04:59 result.tar.gz
[2026-02-04 04:59:33] -rw-r--r--. 1 boincer umatlas      9341 Feb  4 04:59 runtime_log.err
[2026-02-04 04:59:33] -rw-------. 1 boincer umatlas       657 Feb  4 04:59 jKjNDmsOa48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmAH3KDmjTWe0n.diag
[2026-02-04 04:59:33] -rw-r--r--. 1 boincer umatlas     21525 Feb  4 04:59 stderr.txt
[2026-02-04 04:59:52] HITS file was successfully produced:
[2026-02-04 04:59:52] -rw-------. 1 boincer umatlas 182799711 Feb  4 04:57 shared/HITS.pool.root.1
[2026-02-04 04:59:52]  *** Contents of shared directory: ***
[2026-02-04 04:59:52] total 668592
[2026-02-04 04:59:52] -rw-r--r--. 2 boincer umatlas 500139448 Feb  4 03:31 ATLAS.root_0
[2026-02-04 04:59:52] -rw-r--r--. 2 boincer umatlas     15845 Feb  4 03:31 start_atlas.sh
[2026-02-04 04:59:52] -rw-r--r--. 2 boincer umatlas    597757 Feb  4 03:31 input.tar.gz
[2026-02-04 04:59:52] -rw-------. 1 boincer umatlas 182799711 Feb  4 04:57 HITS.pool.root.1
[2026-02-04 04:59:52] -rw-------. 1 boincer umatlas   1075200 Feb  4 04:59 result.tar.gz
04:59:53 (1781521): run_atlas exited; CPU time 24750.984318
04:59:53 (1781521): called boinc_finish(0)

</stderr_txt>
]]>

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