Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:28:15 (1961235): wrapper (7.7.26015): starting
08:28:15 (1961235): wrapper: running run_atlas (--nthreads 8)
[2025-12-04 08:28:15] Arguments: --nthreads 8
[2025-12-04 08:28:15] Threads: 8
[2025-12-04 08:28:15] Checking for CVMFS
[2025-12-04 08:28:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-04 08:28:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-04 08:28:15] Running cvmfs_config stat atlas.cern.ch
[2025-12-04 08:28:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-04 08:28:15] 2.13.3.0 7385 41566 205708 153638 3 476 24313532 32503808 32411 16776704 0 589385390 99.637 558159807 47181 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-04 08:28:15] CVMFS is ok
[2025-12-04 08:28:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-04 08:28:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-04 08:28:15] Further information can be found at the LHC@home message board.
[2025-12-04 08:28:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-04 08:28:15] Checking for apptainer binary...
[2025-12-04 08:28:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-04 08:28:15] Running /usr/bin/apptainer --version
[2025-12-04 08:28:15] apptainer version 1.4.4-1.el9
[2025-12-04 08:28:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-04 08:28:15] c8-7-1.aglt2.org
[2025-12-04 08:28:15] apptainer works
[2025-12-04 08:28:15] Set ATHENA_PROC_NUMBER=8
[2025-12-04 08:28:15] Set ATHENA_CORE_NUMBER=8
[2025-12-04 08:28:15] Starting ATLAS job with PandaID=6898987836
[2025-12-04 08:28:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-04 15:43:35]  *** The last 200 lines of the pilot log: ***
[2025-12-04 15:43:35] 2025-12-04 20:43:00,660 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-04 15:43:35] 2025-12-04 20:43:01,665 | INFO     | time since job start (26073s) is within the limit (172800.0s)
[2025-12-04 15:43:35] 2025-12-04 20:43:02,573 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-04 15:43:35] 2025-12-04 20:43:02,578 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3750.033265624998
[2025-12-04 15:43:35] 2025-12-04 20:43:02,593 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6898987836/memory_monitor_summary.json (trf name=prmon)
[2025-12-04 15:43:35] 2025-12-04 20:43:02,594 | INFO     | extracted standard info from prmon json
[2025-12-04 15:43:35] 2025-12-04 20:43:02,594 | INFO     | extracted standard memory fields from prmon json
[2025-12-04 15:43:35] 2025-12-04 20:43:02,594 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-04 15:43:35] 2025-12-04 20:43:02,600 | INFO     | fitting pss+swap vs Time
[2025-12-04 15:43:35] 2025-12-04 20:43:02,600 | INFO     | sum of square deviations: 24142574750.384167
[2025-12-04 15:43:35] 2025-12-04 20:43:02,603 | INFO     | sum of deviations: 157932079620.24606
[2025-12-04 15:43:35] 2025-12-04 20:43:02,603 | INFO     | mean x: 1764867929.1850116
[2025-12-04 15:43:35] 2025-12-04 20:43:02,603 | INFO     | mean y: 2872170.819672131
[2025-12-04 15:43:35] 2025-12-04 20:43:02,603 | INFO     | intersect: -11542261900.136484
[2025-12-04 15:43:35] 2025-12-04 20:43:02,603 | INFO     | chi2: 4.896152120166018
[2025-12-04 15:43:35] 2025-12-04 20:43:02,604 | INFO     | sum of square deviations: 23304564520.779655
[2025-12-04 15:43:35] 2025-12-04 20:43:02,606 | INFO     | sum of deviations: 297049766349.3575
[2025-12-04 15:43:35] 2025-12-04 20:43:02,606 | INFO     | mean x: 1764867776.699052
[2025-12-04 15:43:35] 2025-12-04 20:43:02,606 | INFO     | mean y: 2897471.144549763
[2025-12-04 15:43:35] 2025-12-04 20:43:02,606 | INFO     | intersect: -22492848383.214134
[2025-12-04 15:43:35] 2025-12-04 20:43:02,607 | INFO     | chi2: 1.7783849754493604
[2025-12-04 15:43:35] 2025-12-04 20:43:02,607 | INFO     | current chi2=1.7783849754493604 (change=63.6779060004153 %)
[2025-12-04 15:43:35] 2025-12-04 20:43:02,607 | INFO     | sum of square deviations: 22486080089.673763
[2025-12-04 15:43:35] 2025-12-04 20:43:02,609 | INFO     | sum of deviations: 324806293012.87537
[2025-12-04 15:43:35] 2025-12-04 20:43:02,609 | INFO     | mean x: 1764867624.203837
[2025-12-04 15:43:35] 2025-12-04 20:43:02,609 | INFO     | mean y: 2902603.57793765
[2025-12-04 15:43:35] 2025-12-04 20:43:02,609 | INFO     | intersect: -25490207284.40723
[2025-12-04 15:43:35] 2025-12-04 20:43:02,610 | INFO     | chi2: 1.4560076390251222
[2025-12-04 15:43:35] 2025-12-04 20:43:02,610 | INFO     | current chi2=1.4560076390251222 (change=18.127533738457288 %)
[2025-12-04 15:43:35] 2025-12-04 20:43:02,610 | INFO     | right removable region: 416
[2025-12-04 15:43:35] 2025-12-04 20:43:02,610 | INFO     | sum of square deviations: 23304255860.77965
[2025-12-04 15:43:35] 2025-12-04 20:43:02,613 | INFO     | sum of deviations: 79247012431.22751
[2025-12-04 15:43:35] 2025-12-04 20:43:02,613 | INFO     | mean x: 1764868081.699052
[2025-12-04 15:43:35] 2025-12-04 20:43:02,613 | INFO     | mean y: 2886418.5687203794
[2025-12-04 15:43:35] 2025-12-04 20:43:02,613 | INFO     | intersect: -5998614922.877774
[2025-12-04 15:43:35] 2025-12-04 20:43:02,613 | INFO     | chi2: 3.530987780900937
[2025-12-04 15:43:35] 2025-12-04 20:43:02,613 | INFO     | current chi2=3.530987780900937 (change=27.88239224925862 %)
[2025-12-04 15:43:35] 2025-12-04 20:43:02,613 | INFO     | sum of square deviations: 22485693717.07891
[2025-12-04 15:43:35] 2025-12-04 20:43:02,616 | INFO     | sum of deviations: 60966532467.78434
[2025-12-04 15:43:35] 2025-12-04 20:43:02,616 | INFO     | mean x: 1764868234.201439
[2025-12-04 15:43:35] 2025-12-04 20:43:02,616 | INFO     | mean y: 2889821.6930455635
[2025-12-04 15:43:35] 2025-12-04 20:43:02,616 | INFO     | intersect: -4782281490.147679
[2025-12-04 15:43:35] 2025-12-04 20:43:02,616 | INFO     | chi2: 3.5057375000934754
[2025-12-04 15:43:35] 2025-12-04 20:43:02,616 | INFO     | current chi2=3.5057375000934754 (change=0.7151053012428962 %)
[2025-12-04 15:43:35] 2025-12-04 20:43:02,616 | INFO     | left removable region: 20
[2025-12-04 15:43:35] 2025-12-04 20:43:02,617 | INFO     | sum of square deviations: 19257016159.15908
[2025-12-04 15:43:35] 2025-12-04 20:43:02,619 | INFO     | sum of deviations: 195615203350.93198
[2025-12-04 15:43:35] 2025-12-04 20:43:02,619 | INFO     | mean x: 1764868203.7348485
[2025-12-04 15:43:35] 2025-12-04 20:43:02,619 | INFO     | mean y: 2927178.446969697
[2025-12-04 15:43:35] 2025-12-04 20:43:02,619 | INFO     | intersect: -17924827033.72285
[2025-12-04 15:43:35] 2025-12-04 20:43:02,619 | INFO     | chi2: 0.026031696227114022
[2025-12-04 15:43:35] 2025-12-04 20:43:02,619 | INFO     | current memory leak: 10.16 B/s (using 396 data points, chi2=0.03)
[2025-12-04 15:43:35] 2025-12-04 20:43:02,620 | INFO     | could have reported an average CPU frequency of 3766 MHz (18 samples)
[2025-12-04 15:43:35] 2025-12-04 20:43:02,620 | INFO     | ..............................
[2025-12-04 15:43:35] 2025-12-04 20:43:02,620 | INFO     | . Timing measurements:
[2025-12-04 15:43:35] 2025-12-04 20:43:02,620 | INFO     | . get job = 0 s
[2025-12-04 15:43:35] 2025-12-04 20:43:02,620 | INFO     | . initial setup = 2 s
[2025-12-04 15:43:35] 2025-12-04 20:43:02,620 | INFO     | . payload setup = 6 s
[2025-12-04 15:43:35] 2025-12-04 20:43:02,620 | INFO     | . stage-in = 0 s
[2025-12-04 15:43:35] 2025-12-04 20:43:02,620 | INFO     | . payload execution = 26038 s
[2025-12-04 15:43:35] 2025-12-04 20:43:02,620 | INFO     | . stage-out = 2 s
[2025-12-04 15:43:35] 2025-12-04 20:43:02,620 | INFO     | . log creation = 0 s
[2025-12-04 15:43:35] 2025-12-04 20:43:02,620 | INFO     | ..............................
[2025-12-04 15:43:35] 2025-12-04 20:43:02,678 | INFO     | 
[2025-12-04 15:43:35] 2025-12-04 20:43:02,679 | INFO     | job summary report
[2025-12-04 15:43:35] 2025-12-04 20:43:02,679 | INFO     | --------------------------------------------------
[2025-12-04 15:43:35] 2025-12-04 20:43:02,679 | INFO     | PanDA job id: 6898987836
[2025-12-04 15:43:35] 2025-12-04 20:43:02,679 | INFO     | task id: 47556173
[2025-12-04 15:43:35] 2025-12-04 20:43:02,679 | INFO     | errors: (none)
[2025-12-04 15:43:35] 2025-12-04 20:43:02,679 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-04 15:43:35] 2025-12-04 20:43:02,679 | INFO     | pilot state: finished 
[2025-12-04 15:43:35] 2025-12-04 20:43:02,679 | INFO     | transexitcode: 0
[2025-12-04 15:43:35] 2025-12-04 20:43:02,679 | INFO     | exeerrorcode: 0
[2025-12-04 15:43:35] 2025-12-04 20:43:02,679 | INFO     | exeerrordiag: 
[2025-12-04 15:43:35] 2025-12-04 20:43:02,679 | INFO     | exitcode: 0
[2025-12-04 15:43:35] 2025-12-04 20:43:02,679 | INFO     | exitmsg: OK
[2025-12-04 15:43:35] 2025-12-04 20:43:02,679 | INFO     | cpuconsumptiontime: 138277 s
[2025-12-04 15:43:35] 2025-12-04 20:43:02,679 | INFO     | nevents: 1000
[2025-12-04 15:43:35] 2025-12-04 20:43:02,680 | INFO     | neventsw: 0
[2025-12-04 15:43:35] 2025-12-04 20:43:02,680 | INFO     | pid: 1999479
[2025-12-04 15:43:35] 2025-12-04 20:43:02,680 | INFO     | pgrp: 1999479
[2025-12-04 15:43:35] 2025-12-04 20:43:02,680 | INFO     | corecount: 8
[2025-12-04 15:43:35] 2025-12-04 20:43:02,680 | INFO     | event service: False
[2025-12-04 15:43:35] 2025-12-04 20:43:02,680 | INFO     | sizes: {0: 2284144, 1: 2284343, 5: 2284605, 11: 2284661, 26048: 2322034, 26052: 2331028, 26053: 2331212, 26059: 2331458}
[2025-12-04 15:43:35] 2025-12-04 20:43:02,680 | INFO     | --------------------------------------------------
[2025-12-04 15:43:35] 2025-12-04 20:43:02,680 | INFO     | 
[2025-12-04 15:43:35] 2025-12-04 20:43:02,680 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-04 15:43:35] 2025-12-04 20:43:02,700 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-04 15:43:35] 2025-12-04 20:43:02,700 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-04 15:43:35] 2025-12-04 20:43:02,700 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-04 15:43:35] 2025-12-04 20:43:02,700 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-04 15:43:35] 2025-12-04 20:43:02,700 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-04 15:43:35] 2025-12-04 20:43:02,700 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-04 15:43:35] 2025-12-04 20:43:02,700 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-04 15:43:35] 2025-12-04 20:43:02,700 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-04 15:43:35] 2025-12-04 20:43:02,700 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-04 15:43:35] 2025-12-04 20:43:02,700 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-04 15:43:35] 2025-12-04 20:43:02,700 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-04 15:43:35] 2025-12-04 20:43:02,701 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-04 15:43:35] 2025-12-04 20:43:02,701 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-04 15:43:35] 2025-12-04 20:43:02,701 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-04 15:43:35] 2025-12-04 20:43:02,701 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-04 15:43:35] 2025-12-04 20:43:02,701 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-04 15:43:35] 2025-12-04 20:43:02,701 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-04 15:43:35] 2025-12-04 20:43:02,701 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-04 15:43:35] 2025-12-04 20:43:02,701 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-04 15:43:35] 2025-12-04 20:43:02,701 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-04 15:43:35] 2025-12-04 20:43:02,701 | INFO     | job 6898987836 has completed (purged errors)
[2025-12-04 15:43:35] 2025-12-04 20:43:02,701 | INFO     | overall cleanup function is called
[2025-12-04 15:43:35] 2025-12-04 20:43:03,714 | INFO     | --- collectZombieJob: --- 10, [1999479]
[2025-12-04 15:43:35] 2025-12-04 20:43:03,714 | INFO     | zombie collector waiting for pid 1999479
[2025-12-04 15:43:35] 2025-12-04 20:43:03,714 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-04 15:43:35] 2025-12-04 20:43:03,714 | INFO     | collected zombie processes
[2025-12-04 15:43:35] 2025-12-04 20:43:03,714 | INFO     | will attempt to kill all subprocesses of pid=1999479
[2025-12-04 15:43:35] 2025-12-04 20:43:04,164 | INFO     | process IDs to be killed: [1999479] (in reverse order)
[2025-12-04 15:43:35] 2025-12-04 20:43:04,331 | WARNING  | found no corresponding commands to process id(s)
[2025-12-04 15:43:35] 2025-12-04 20:43:04,332 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-04 15:43:35] 2025-12-04 20:43:04,363 | INFO     | did not find any defunct processes belonging to 1999479
[2025-12-04 15:43:35] 2025-12-04 20:43:04,390 | INFO     | did not find any defunct processes belonging to 1999479
[2025-12-04 15:43:35] 2025-12-04 20:43:04,391 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-04 15:43:35] 2025-12-04 20:43:04,391 | INFO     | ready for new job
[2025-12-04 15:43:35] 2025-12-04 20:43:04,392 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-04 15:43:35] 2025-12-04 20:43:04,393 | INFO     | ***************************************
[2025-12-04 15:43:35] 2025-12-04 20:43:04,393 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-04 15:43:35] 2025-12-04 20:43:04,393 | INFO     | ***************************************
[2025-12-04 15:43:35] 2025-12-04 20:43:04,394 | INFO     | 
[2025-12-04 15:43:35] 2025-12-04 20:43:04,398 | INFO     | architecture information:
[2025-12-04 15:43:35] 2025-12-04 20:43:04,398 | INFO     | executing command: cat /etc/os-release
[2025-12-04 15:43:35] 2025-12-04 20:43:04,414 | INFO     | cat /etc/os-release:
[2025-12-04 15:43:35] NAME="CentOS Linux"
[2025-12-04 15:43:35] VERSION="7 (Core)"
[2025-12-04 15:43:35] ID="centos"
[2025-12-04 15:43:35] ID_LIKE="rhel fedora"
[2025-12-04 15:43:35] VERSION_ID="7"
[2025-12-04 15:43:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-04 15:43:35] ANSI_COLOR="0;31"
[2025-12-04 15:43:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-04 15:43:35] HOME_URL="https://www.centos.org/"
[2025-12-04 15:43:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-04 15:43:35] 
[2025-12-04 15:43:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-04 15:43:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-04 15:43:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-04 15:43:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-04 15:43:35] 
[2025-12-04 15:43:35] 2025-12-04 20:43:04,414 | INFO     | ***************************************
[2025-12-04 15:43:35] 2025-12-04 20:43:04,917 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-04 15:43:35] 2025-12-04 20:43:04,936 | INFO     | sufficient remaining disk space (88980062208 B)
[2025-12-04 15:43:35] 2025-12-04 20:43:04,936 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-04 15:43:35] 2025-12-04 20:43:04,936 | INFO     | current server update state: UPDATING_FINAL
[2025-12-04 15:43:35] 2025-12-04 20:43:04,936 | INFO     | update_server=False
[2025-12-04 15:43:35] 2025-12-04 20:43:04,936 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-04 15:43:35] 2025-12-04 20:43:04,936 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-04 15:43:35] 2025-12-04 20:43:04,936 | INFO     | aborting loop
[2025-12-04 15:43:35] 2025-12-04 20:43:04,937 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-04 15:43:35] 2025-12-04 20:43:05,098 | INFO     | all job control threads have been joined
[2025-12-04 15:43:35] 2025-12-04 20:43:05,264 | INFO     | all data control threads have been joined
[2025-12-04 15:43:35] 2025-12-04 20:43:05,937 | INFO     | [job] retrieve thread has finished
[2025-12-04 15:43:35] 2025-12-04 20:43:05,938 | INFO     | [job] job monitor thread has finished
[2025-12-04 15:43:35] 2025-12-04 20:43:06,038 | INFO     | [data] copytool_in thread has finished
[2025-12-04 15:43:35] 2025-12-04 20:43:06,090 | INFO     | all payload control threads have been joined
[2025-12-04 15:43:35] 2025-12-04 20:43:06,103 | INFO     | [job] control thread has finished
[2025-12-04 15:43:35] 2025-12-04 20:43:06,269 | INFO     | [data] control thread has finished
[2025-12-04 15:43:35] 2025-12-04 20:43:06,346 | INFO     | [payload] execute_payloads thread has finished
[2025-12-04 15:43:35] 2025-12-04 20:43:06,619 | INFO     | [payload] validate_pre thread has finished
[2025-12-04 15:43:35] 2025-12-04 20:43:06,670 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-04 15:43:35] 2025-12-04 20:43:06,695 | INFO     | [job] create_data_payload thread has finished
[2025-12-04 15:43:35] 2025-12-04 20:43:06,899 | INFO     | [payload] failed_post thread has finished
[2025-12-04 15:43:35] 2025-12-04 20:43:06,942 | INFO     | [data] copytool_out thread has finished
[2025-12-04 15:43:35] 2025-12-04 20:43:06,954 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-04 15:43:35] 2025-12-04 20:43:07,095 | INFO     | [payload] control thread has finished
[2025-12-04 15:43:35] 2025-12-04 20:43:07,390 | INFO     | [payload] validate_post thread has finished
[2025-12-04 15:43:35] 2025-12-04 20:43:07,412 | INFO     | [job] validate thread has finished
[2025-12-04 15:43:35] 2025-12-04 20:43:07,690 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-04 15:43:35] 2025-12-04 20:43:08,695 | INFO     | [job] queue monitor thread has finished
[2025-12-04 15:43:35] 2025-12-04 20:43:10,961 | INFO     | [data] queue_monitor thread has finished
[2025-12-04 15:43:35] 2025-12-04 20:43:12,870 | INFO     | [monitor] cgroup control has ended
[2025-12-04 15:43:35] 2025-12-04 20:43:13,996 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140116138788672)>', '<ExcThread(monitor, started 140115498223360)>']
[2025-12-04 15:43:35] 2025-12-04 20:43:19,021 | INFO     | all workflow threads have been joined
[2025-12-04 15:43:35] 2025-12-04 20:43:19,021 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-04 15:43:35] 2025-12-04 20:43:19,022 | INFO     | traces error code: 0
[2025-12-04 15:43:35] 2025-12-04 20:43:19,022 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-04 15:43:35] 2025-12-04 20:43:27,996 [wrapper] supervise_pilot (15 min periods counter: 30)
[2025-12-04 15:43:35] 2025-12-04 20:43:35,396 | INFO     | PID=1979214 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-04 15:43:35] 2025-12-04 20:43:35,396 | INFO     | .. there are 47 such processes running
[2025-12-04 15:43:35] 2025-12-04 20:43:35,396 | INFO     | found 0 job(s) in 20 queues
[2025-12-04 15:43:35] 2025-12-04 20:43:35,396 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-04 15:43:35] 2025-12-04 20:43:35,396 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-04 15:43:35] 2025-12-04 20:43:35,396 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-04 15:43:35] 2025-12-04 20:43:35,397 | INFO     | [monitor] control thread has ended
[2025-12-04 15:43:35] 2025-12-04 20:43:35,495 [wrapper] ==== pilot stdout END ====
[2025-12-04 15:43:35] 2025-12-04 20:43:35,498 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-04 15:43:35] 2025-12-04 20:43:35,500 [wrapper] pilotpid: 1979214
[2025-12-04 15:43:35] 2025-12-04 20:43:35,503 [wrapper] Pilot exit status: 0
[2025-12-04 15:43:35] 2025-12-04 20:43:35,520 [wrapper] pandaids: 6898987836
[2025-12-04 15:43:35] 2025-12-04 20:43:35,638 [wrapper] cleanup supervisor_pilot  405819 1979215
[2025-12-04 15:43:35] 2025-12-04 20:43:35,642 [wrapper] Test setup, not cleaning
[2025-12-04 15:43:35] 2025-12-04 20:43:35,644 [wrapper] apfmon messages muted
[2025-12-04 15:43:35] 2025-12-04 20:43:35,647 [wrapper] ==== wrapper stdout END ====
[2025-12-04 15:43:35] 2025-12-04 20:43:35,648 [wrapper] ==== wrapper stderr END ====
[2025-12-04 15:43:35]  *** Error codes and diagnostics ***
[2025-12-04 15:43:35]     "exeErrorCode": 0,
[2025-12-04 15:43:35]     "exeErrorDiag": "",
[2025-12-04 15:43:35]     "pilotErrorCode": 0,
[2025-12-04 15:43:35]     "pilotErrorDiag": "",
[2025-12-04 15:43:35]  *** Listing of results directory ***
[2025-12-04 15:43:35] total 1311076
[2025-12-04 15:43:35] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 19:01 pilot3.tar.gz
[2025-12-04 15:43:35] -rwx------. 1 boincer umatlas     36292 Nov 26 19:28 runpilot2-wrapper.sh
[2025-12-04 15:43:35] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 19:28 queuedata.json
[2025-12-04 15:43:35] -rw-r--r--. 1 boincer umatlas       100 Dec  4 08:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-04 15:43:35] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  4 08:28 run_atlas
[2025-12-04 15:43:35] -rw-r--r--. 1 boincer umatlas       105 Dec  4 08:28 job.xml
[2025-12-04 15:43:35] -rw-r--r--. 2 boincer umatlas 409257209 Dec  4 08:28 EVNT.47483658._003241.pool.root.1
[2025-12-04 15:43:35] -rw-r--r--. 2 boincer umatlas     15847 Dec  4 08:28 start_atlas.sh
[2025-12-04 15:43:35] drwxrwx--x. 2 boincer umatlas      4096 Dec  4 08:28 shared
[2025-12-04 15:43:35] -rw-r--r--. 2 boincer umatlas    590107 Dec  4 08:28 input.tar.gz
[2025-12-04 15:43:35] -rw-r--r--. 1 boincer umatlas         0 Dec  4 08:28 boinc_lockfile
[2025-12-04 15:43:35] -rw-r--r--. 1 boincer umatlas      2786 Dec  4 08:28 pandaJob.out
[2025-12-04 15:43:35] -rw-------. 1 boincer umatlas        57 Dec  4 08:28 setup.sh.local
[2025-12-04 15:43:35] -rw-------. 1 boincer umatlas    985564 Dec  4 08:28 agis_schedconf.cvmfs.json
[2025-12-04 15:43:35] drwx------. 5 boincer umatlas      4096 Dec  4 08:28 pilot3
[2025-12-04 15:43:35] -rw-r--r--. 1 boincer umatlas      7172 Dec  4 15:19 init_data.xml
[2025-12-04 15:43:35] -rw-r--r--. 1 boincer umatlas       532 Dec  4 15:34 boinc_task_state.xml
[2025-12-04 15:43:35] -rw-------. 1 boincer umatlas 919175144 Dec  4 15:42 HITS.47556173._001976.pool.root.1
[2025-12-04 15:43:35] -rw-------. 1 boincer umatlas      1070 Dec  4 15:42 memory_monitor_summary.json
[2025-12-04 15:43:35] -rw-------. 1 boincer umatlas   1516240 Dec  4 15:42 agis_ddmendpoints.agis.ALL.json
[2025-12-04 15:43:35] -rw-------. 1 boincer umatlas   1698386 Dec  4 15:42 log.47556173._001976.job.log.tgz.1
[2025-12-04 15:43:35] -rw-------. 1 boincer umatlas        95 Dec  4 15:42 pilot_heartbeat.json
[2025-12-04 15:43:35] -rw-------. 1 boincer umatlas      8640 Dec  4 15:43 heartbeat.json
[2025-12-04 15:43:35] -rw-r--r--. 1 boincer umatlas        29 Dec  4 15:43 wrapper_checkpoint.txt
[2025-12-04 15:43:35] -rw-------. 1 boincer umatlas       823 Dec  4 15:43 pilotlog.txt
[2025-12-04 15:43:35] -rw-------. 1 boincer umatlas   3401225 Dec  4 15:43 log.47556173._001976.job.log.1
[2025-12-04 15:43:35] -rw-------. 1 boincer umatlas       353 Dec  4 15:43 output.list
[2025-12-04 15:43:35] -rw-r--r--. 1 boincer umatlas      8192 Dec  4 15:43 boinc_mmap_file
[2025-12-04 15:43:35] -rw-r--r--. 1 boincer umatlas       620 Dec  4 15:43 runtime_log
[2025-12-04 15:43:35] -rw-------. 1 boincer umatlas   5120000 Dec  4 15:43 result.tar.gz
[2025-12-04 15:43:35] -rw-r--r--. 1 boincer umatlas      9333 Dec  4 15:43 runtime_log.err
[2025-12-04 15:43:35] -rw-------. 1 boincer umatlas       663 Dec  4 15:43 7sOKDmI3ei8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmoSNKDmHmKOtn.diag
[2025-12-04 15:43:35] -rw-r--r--. 1 boincer umatlas     21321 Dec  4 15:43 stderr.txt
[2025-12-04 15:43:35] HITS file was successfully produced:
[2025-12-04 15:43:35] -rw-------. 1 boincer umatlas 919175144 Dec  4 15:42 shared/HITS.pool.root.1
[2025-12-04 15:43:35]  *** Contents of shared directory: ***
[2025-12-04 15:43:35] total 1302904
[2025-12-04 15:43:35] -rw-r--r--. 2 boincer umatlas 409257209 Dec  4 08:28 ATLAS.root_0
[2025-12-04 15:43:35] -rw-r--r--. 2 boincer umatlas     15847 Dec  4 08:28 start_atlas.sh
[2025-12-04 15:43:35] -rw-r--r--. 2 boincer umatlas    590107 Dec  4 08:28 input.tar.gz
[2025-12-04 15:43:35] -rw-------. 1 boincer umatlas 919175144 Dec  4 15:42 HITS.pool.root.1
[2025-12-04 15:43:35] -rw-------. 1 boincer umatlas   5120000 Dec  4 15:43 result.tar.gz
15:43:37 (1961235): run_atlas exited; CPU time 138511.719066
15:43:37 (1961235): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN