Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:27:35 (2575793): wrapper (7.7.26015): starting
08:27:35 (2575793): wrapper: running run_atlas (--nthreads 9)
[2025-12-04 08:27:35] Arguments: --nthreads 9
[2025-12-04 08:27:35] Threads: 9
[2025-12-04 08:27:35] Checking for CVMFS
[2025-12-04 08:27:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-04 08:27:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-04 08:27:35] Running cvmfs_config stat atlas.cern.ch
[2025-12-04 08:27:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-04 08:27:36] 2.13.3.0 11836 40150 376320 153638 0 238 26196245 32935936 36034 16776704 0 200426875 99.545 224098612 33342 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-04 08:27:36] CVMFS is ok
[2025-12-04 08:27:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-04 08:27:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-04 08:27:36] Further information can be found at the LHC@home message board.
[2025-12-04 08:27:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-04 08:27:36] Checking for apptainer binary...
[2025-12-04 08:27:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-04 08:27:36] Running /usr/bin/apptainer --version
[2025-12-04 08:27:36] apptainer version 1.4.4-1.el9
[2025-12-04 08:27:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-04 08:27:36] c6-2-11-1.aglt2.org
[2025-12-04 08:27:36] apptainer works
[2025-12-04 08:27:36] Set ATHENA_PROC_NUMBER=9
[2025-12-04 08:27:36] Set ATHENA_CORE_NUMBER=9
[2025-12-04 08:27:36] Starting ATLAS job with PandaID=6898362922
[2025-12-04 08:27:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-05 08:37:34]  *** The last 200 lines of the pilot log: ***
[2025-12-05 08:37:34] 2025-12-05 13:36:55,525 | INFO     | monitor loop #4687: job 0:6898362922 is in state 'finished'
[2025-12-05 08:37:34] 2025-12-05 13:36:55,525 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-05 08:37:34] 2025-12-05 13:36:55,720 | INFO     | time since job start (86947s) is within the limit (172800.0s)
[2025-12-05 08:37:34] 2025-12-05 13:36:57,263 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-05 08:37:34] 2025-12-05 13:36:57,276 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2679.0898333333334
[2025-12-05 08:37:34] 2025-12-05 13:36:57,294 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6898362922/memory_monitor_summary.json (trf name=prmon)
[2025-12-05 08:37:34] 2025-12-05 13:36:57,294 | INFO     | extracted standard info from prmon json
[2025-12-05 08:37:34] 2025-12-05 13:36:57,294 | INFO     | extracted standard memory fields from prmon json
[2025-12-05 08:37:34] 2025-12-05 13:36:57,295 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-05 08:37:34] 2025-12-05 13:36:57,322 | INFO     | fitting pss+swap vs Time
[2025-12-05 08:37:34] 2025-12-05 13:36:57,324 | INFO     | sum of square deviations: 897238229434.7538
[2025-12-05 08:37:34] 2025-12-05 13:36:57,361 | INFO     | sum of deviations: 3756558873662.05
[2025-12-05 08:37:34] 2025-12-05 13:36:57,361 | INFO     | mean x: 1764898330.794386
[2025-12-05 08:37:34] 2025-12-05 13:36:57,361 | INFO     | mean y: 3135704.5564912283
[2025-12-05 08:37:34] 2025-12-05 13:36:57,361 | INFO     | intersect: -7386144275.002286
[2025-12-05 08:37:34] 2025-12-05 13:36:57,362 | INFO     | chi2: 10.436114845137348
[2025-12-05 08:37:34] 2025-12-05 13:36:57,364 | INFO     | sum of square deviations: 887827167718.5989
[2025-12-05 08:37:34] 2025-12-05 13:36:57,392 | INFO     | sum of deviations: 4249319106892.3745
[2025-12-05 08:37:34] 2025-12-05 13:36:57,392 | INFO     | mean x: 1764898178.3007042
[2025-12-05 08:37:34] 2025-12-05 13:36:57,392 | INFO     | mean y: 3143688.8211267604
[2025-12-05 08:37:34] 2025-12-05 13:36:57,392 | INFO     | intersect: -8444013396.993314
[2025-12-05 08:37:34] 2025-12-05 13:36:57,393 | INFO     | chi2: 7.568539208219749
[2025-12-05 08:37:34] 2025-12-05 13:36:57,393 | INFO     | current chi2=7.568539208219749 (change=27.47742507120579 %)
[2025-12-05 08:37:34] 2025-12-05 13:36:57,394 | INFO     | sum of square deviations: 878482153752.3292
[2025-12-05 08:37:34] 2025-12-05 13:36:57,424 | INFO     | sum of deviations: 4820558850496.031
[2025-12-05 08:37:34] 2025-12-05 13:36:57,425 | INFO     | mean x: 1764898025.8070672
[2025-12-05 08:37:34] 2025-12-05 13:36:57,425 | INFO     | mean y: 3153009.6374558304
[2025-12-05 08:37:34] 2025-12-05 13:36:57,425 | INFO     | intersect: -9681499959.335476
[2025-12-05 08:37:34] 2025-12-05 13:36:57,427 | INFO     | chi2: 3.857569530138663
[2025-12-05 08:37:34] 2025-12-05 13:36:57,427 | INFO     | current chi2=3.857569530138663 (change=49.03151818320263 %)
[2025-12-05 08:37:34] 2025-12-05 13:36:57,428 | INFO     | sum of square deviations: 869202610331.94
[2025-12-05 08:37:34] 2025-12-05 13:36:57,455 | INFO     | sum of deviations: 5071176731838.842
[2025-12-05 08:37:34] 2025-12-05 13:36:57,456 | INFO     | mean x: 1764897873.3106382
[2025-12-05 08:37:34] 2025-12-05 13:36:57,456 | INFO     | mean y: 3157126.630496454
[2025-12-05 08:37:34] 2025-12-05 13:36:57,456 | INFO     | intersect: -10293762052.876804
[2025-12-05 08:37:34] 2025-12-05 13:36:57,457 | INFO     | chi2: 2.9600188413594894
[2025-12-05 08:37:34] 2025-12-05 13:36:57,458 | INFO     | current chi2=2.9600188413594894 (change=23.26725887289219 %)
[2025-12-05 08:37:34] 2025-12-05 13:36:57,458 | INFO     | right removable region: 1409
[2025-12-05 08:37:34] 2025-12-05 13:36:57,459 | INFO     | sum of square deviations: 887825781437.7999
[2025-12-05 08:37:34] 2025-12-05 13:36:57,489 | INFO     | sum of deviations: 3355216903716.9062
[2025-12-05 08:37:34] 2025-12-05 13:36:57,489 | INFO     | mean x: 1764898483.2992957
[2025-12-05 08:37:34] 2025-12-05 13:36:57,489 | INFO     | mean y: 3142200.908450704
[2025-12-05 08:37:34] 2025-12-05 13:36:57,489 | INFO     | intersect: -6666654225.728646
[2025-12-05 08:37:34] 2025-12-05 13:36:57,491 | INFO     | chi2: 8.395549318597213
[2025-12-05 08:37:34] 2025-12-05 13:36:57,491 | INFO     | current chi2=8.395549318597213 (change=19.55292325563977 %)
[2025-12-05 08:37:34] 2025-12-05 13:36:57,491 | INFO     | left removable region: 10
[2025-12-05 08:37:34] 2025-12-05 13:36:57,492 | INFO     | sum of square deviations: 849016380668.42
[2025-12-05 08:37:34] 2025-12-05 13:36:57,520 | INFO     | sum of deviations: 4554774688922.468
[2025-12-05 08:37:34] 2025-12-05 13:36:57,521 | INFO     | mean x: 1764898147.8155825
[2025-12-05 08:37:34] 2025-12-05 13:36:57,521 | INFO     | mean y: 3166832.0793423876
[2025-12-05 08:37:34] 2025-12-05 13:36:57,521 | INFO     | intersect: -9465099735.248583
[2025-12-05 08:37:34] 2025-12-05 13:36:57,522 | INFO     | chi2: 0.6727523850366689
[2025-12-05 08:37:34] 2025-12-05 13:36:57,522 | INFO     | current memory leak: 5.36 B/s (using 1399 data points, chi2=0.67)
[2025-12-05 08:37:34] 2025-12-05 13:36:57,524 | INFO     | could have reported an average CPU frequency of 2696 MHz (51 samples)
[2025-12-05 08:37:34] 2025-12-05 13:36:57,524 | INFO     | ..............................
[2025-12-05 08:37:34] 2025-12-05 13:36:57,524 | INFO     | . Timing measurements:
[2025-12-05 08:37:34] 2025-12-05 13:36:57,524 | INFO     | . get job = 0 s
[2025-12-05 08:37:34] 2025-12-05 13:36:57,524 | INFO     | . initial setup = 3 s
[2025-12-05 08:37:34] 2025-12-05 13:36:57,524 | INFO     | . payload setup = 6 s
[2025-12-05 08:37:34] 2025-12-05 13:36:57,524 | INFO     | . stage-in = 0 s
[2025-12-05 08:37:34] 2025-12-05 13:36:57,524 | INFO     | . payload execution = 86907 s
[2025-12-05 08:37:34] 2025-12-05 13:36:57,524 | INFO     | . stage-out = 5 s
[2025-12-05 08:37:34] 2025-12-05 13:36:57,524 | INFO     | . log creation = 0 s
[2025-12-05 08:37:34] 2025-12-05 13:36:57,524 | INFO     | ..............................
[2025-12-05 08:37:34] 2025-12-05 13:36:57,603 | INFO     | 
[2025-12-05 08:37:34] 2025-12-05 13:36:57,604 | INFO     | job summary report
[2025-12-05 08:37:34] 2025-12-05 13:36:57,604 | INFO     | --------------------------------------------------
[2025-12-05 08:37:34] 2025-12-05 13:36:57,604 | INFO     | PanDA job id: 6898362922
[2025-12-05 08:37:34] 2025-12-05 13:36:57,604 | INFO     | task id: 47556173
[2025-12-05 08:37:34] 2025-12-05 13:36:57,604 | INFO     | errors: (none)
[2025-12-05 08:37:34] 2025-12-05 13:36:57,604 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-05 08:37:34] 2025-12-05 13:36:57,604 | INFO     | pilot state: finished 
[2025-12-05 08:37:34] 2025-12-05 13:36:57,604 | INFO     | transexitcode: 0
[2025-12-05 08:37:34] 2025-12-05 13:36:57,605 | INFO     | exeerrorcode: 0
[2025-12-05 08:37:34] 2025-12-05 13:36:57,605 | INFO     | exeerrordiag: 
[2025-12-05 08:37:34] 2025-12-05 13:36:57,605 | INFO     | exitcode: 0
[2025-12-05 08:37:34] 2025-12-05 13:36:57,605 | INFO     | exitmsg: OK
[2025-12-05 08:37:34] 2025-12-05 13:36:57,605 | INFO     | cpuconsumptiontime: 278145 s
[2025-12-05 08:37:34] 2025-12-05 13:36:57,605 | INFO     | nevents: 1000
[2025-12-05 08:37:34] 2025-12-05 13:36:57,605 | INFO     | neventsw: 0
[2025-12-05 08:37:34] 2025-12-05 13:36:57,605 | INFO     | pid: 2591242
[2025-12-05 08:37:34] 2025-12-05 13:36:57,605 | INFO     | pgrp: 2591242
[2025-12-05 08:37:34] 2025-12-05 13:36:57,605 | INFO     | corecount: 9
[2025-12-05 08:37:34] 2025-12-05 13:36:57,605 | INFO     | event service: False
[2025-12-05 08:37:34] 2025-12-05 13:36:57,605 | INFO     | sizes: {0: 2284315, 5: 2284577, 11: 2284633, 86918: 2348432, 86924: 2357426, 86926: 2357482, 86933: 2357856}
[2025-12-05 08:37:34] 2025-12-05 13:36:57,605 | INFO     | --------------------------------------------------
[2025-12-05 08:37:34] 2025-12-05 13:36:57,606 | INFO     | 
[2025-12-05 08:37:34] 2025-12-05 13:36:57,606 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-05 08:37:34] 2025-12-05 13:36:57,632 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-05 08:37:34] 2025-12-05 13:36:57,633 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-05 08:37:34] 2025-12-05 13:36:57,633 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-05 08:37:34] 2025-12-05 13:36:57,633 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-05 08:37:34] 2025-12-05 13:36:57,633 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-05 08:37:34] 2025-12-05 13:36:57,633 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-05 08:37:34] 2025-12-05 13:36:57,633 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-05 08:37:34] 2025-12-05 13:36:57,633 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-05 08:37:34] 2025-12-05 13:36:57,633 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-05 08:37:34] 2025-12-05 13:36:57,634 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-05 08:37:34] 2025-12-05 13:36:57,634 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-05 08:37:34] 2025-12-05 13:36:57,634 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-05 08:37:34] 2025-12-05 13:36:57,634 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-05 08:37:34] 2025-12-05 13:36:57,634 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-05 08:37:34] 2025-12-05 13:36:57,634 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-05 08:37:34] 2025-12-05 13:36:57,634 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-05 08:37:34] 2025-12-05 13:36:57,634 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-05 08:37:34] 2025-12-05 13:36:57,635 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-05 08:37:34] 2025-12-05 13:36:57,635 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-05 08:37:34] 2025-12-05 13:36:57,635 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-05 08:37:34] 2025-12-05 13:36:57,635 | INFO     | job 6898362922 has completed (purged errors)
[2025-12-05 08:37:34] 2025-12-05 13:36:57,635 | INFO     | overall cleanup function is called
[2025-12-05 08:37:34] 2025-12-05 13:36:58,654 | INFO     | --- collectZombieJob: --- 10, [2591242]
[2025-12-05 08:37:34] 2025-12-05 13:36:58,654 | INFO     | zombie collector waiting for pid 2591242
[2025-12-05 08:37:34] 2025-12-05 13:36:58,654 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-05 08:37:34] 2025-12-05 13:36:58,654 | INFO     | collected zombie processes
[2025-12-05 08:37:34] 2025-12-05 13:36:58,654 | INFO     | will attempt to kill all subprocesses of pid=2591242
[2025-12-05 08:37:34] 2025-12-05 13:36:59,136 | INFO     | process IDs to be killed: [2591242] (in reverse order)
[2025-12-05 08:37:34] 2025-12-05 13:36:59,321 | WARNING  | found no corresponding commands to process id(s)
[2025-12-05 08:37:34] 2025-12-05 13:36:59,321 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-05 08:37:34] 2025-12-05 13:36:59,345 | INFO     | did not find any defunct processes belonging to 2591242
[2025-12-05 08:37:34] 2025-12-05 13:36:59,367 | INFO     | did not find any defunct processes belonging to 2591242
[2025-12-05 08:37:34] 2025-12-05 13:36:59,368 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-05 08:37:34] 2025-12-05 13:36:59,368 | INFO     | ready for new job
[2025-12-05 08:37:34] 2025-12-05 13:36:59,368 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-05 08:37:34] 2025-12-05 13:36:59,373 | INFO     | ***************************************
[2025-12-05 08:37:34] 2025-12-05 13:36:59,376 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-05 08:37:34] 2025-12-05 13:36:59,376 | INFO     | ***************************************
[2025-12-05 08:37:34] 2025-12-05 13:36:59,376 | INFO     | 
[2025-12-05 08:37:34] 2025-12-05 13:36:59,381 | INFO     | architecture information:
[2025-12-05 08:37:34] 2025-12-05 13:36:59,382 | INFO     | executing command: cat /etc/os-release
[2025-12-05 08:37:34] 2025-12-05 13:36:59,401 | INFO     | cat /etc/os-release:
[2025-12-05 08:37:34] NAME="CentOS Linux"
[2025-12-05 08:37:34] VERSION="7 (Core)"
[2025-12-05 08:37:34] ID="centos"
[2025-12-05 08:37:34] ID_LIKE="rhel fedora"
[2025-12-05 08:37:34] VERSION_ID="7"
[2025-12-05 08:37:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-05 08:37:34] ANSI_COLOR="0;31"
[2025-12-05 08:37:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-05 08:37:34] HOME_URL="https://www.centos.org/"
[2025-12-05 08:37:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-05 08:37:34] 
[2025-12-05 08:37:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-05 08:37:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-05 08:37:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-05 08:37:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-05 08:37:34] 
[2025-12-05 08:37:34] 2025-12-05 13:36:59,402 | INFO     | ***************************************
[2025-12-05 08:37:34] 2025-12-05 13:36:59,904 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-05 08:37:34] 2025-12-05 13:36:59,929 | INFO     | sufficient remaining disk space (94170513408 B)
[2025-12-05 08:37:34] 2025-12-05 13:36:59,930 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-05 08:37:34] 2025-12-05 13:36:59,930 | INFO     | current server update state: UPDATING_FINAL
[2025-12-05 08:37:34] 2025-12-05 13:36:59,930 | INFO     | update_server=False
[2025-12-05 08:37:34] 2025-12-05 13:36:59,930 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-05 08:37:34] 2025-12-05 13:36:59,930 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-05 08:37:34] 2025-12-05 13:36:59,931 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-05 08:37:34] 2025-12-05 13:36:59,931 | INFO     | aborting loop
[2025-12-05 08:37:34] 2025-12-05 13:37:00,194 | INFO     | all job control threads have been joined
[2025-12-05 08:37:34] 2025-12-05 13:37:00,284 | INFO     | all data control threads have been joined
[2025-12-05 08:37:34] 2025-12-05 13:37:00,658 | INFO     | all payload control threads have been joined
[2025-12-05 08:37:34] 2025-12-05 13:37:00,935 | INFO     | [job] retrieve thread has finished
[2025-12-05 08:37:34] 2025-12-05 13:37:00,936 | INFO     | [job] job monitor thread has finished
[2025-12-05 08:37:34] 2025-12-05 13:37:01,199 | INFO     | [job] control thread has finished
[2025-12-05 08:37:34] 2025-12-05 13:37:01,289 | INFO     | [data] control thread has finished
[2025-12-05 08:37:34] 2025-12-05 13:37:01,343 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-05 08:37:34] 2025-12-05 13:37:01,488 | INFO     | [payload] validate_pre thread has finished
[2025-12-05 08:37:34] 2025-12-05 13:37:01,663 | INFO     | [payload] control thread has finished
[2025-12-05 08:37:34] 2025-12-05 13:37:01,752 | INFO     | [payload] validate_post thread has finished
[2025-12-05 08:37:34] 2025-12-05 13:37:01,764 | INFO     | [payload] failed_post thread has finished
[2025-12-05 08:37:34] 2025-12-05 13:37:01,858 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-05 08:37:34] 2025-12-05 13:37:01,935 | INFO     | [data] copytool_out thread has finished
[2025-12-05 08:37:34] 2025-12-05 13:37:02,012 | INFO     | [payload] execute_payloads thread has finished
[2025-12-05 08:37:34] 2025-12-05 13:37:02,045 | INFO     | [job] create_data_payload thread has finished
[2025-12-05 08:37:34] 2025-12-05 13:37:02,413 | INFO     | [job] validate thread has finished
[2025-12-05 08:37:34] 2025-12-05 13:37:02,427 | INFO     | [data] copytool_in thread has finished
[2025-12-05 08:37:34] 2025-12-05 13:37:02,616 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-05 08:37:34] 2025-12-05 13:37:03,622 | INFO     | [job] queue monitor thread has finished
[2025-12-05 08:37:34] 2025-12-05 13:37:05,865 | INFO     | [data] queue_monitor thread has finished
[2025-12-05 08:37:34] 2025-12-05 13:37:27,479 | INFO     | [monitor] cgroup control has ended
[2025-12-05 08:37:34] 2025-12-05 13:37:29,369 | INFO     | PID=2579480 has CPU usage=9.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-05 08:37:34] 2025-12-05 13:37:29,369 | INFO     | .. there are 35 such processes running
[2025-12-05 08:37:34] 2025-12-05 13:37:29,369 | INFO     | found 0 job(s) in 20 queues
[2025-12-05 08:37:34] 2025-12-05 13:37:29,369 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-05 08:37:34] 2025-12-05 13:37:29,369 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-05 08:37:34] 2025-12-05 13:37:29,545 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139722986710848)>', '<ExcThread(monitor, started 139722198349568)>']
[2025-12-05 08:37:34] 2025-12-05 13:37:30,374 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-05 08:37:34] 2025-12-05 13:37:30,374 | INFO     | [monitor] control thread has ended
[2025-12-05 08:37:34] 2025-12-05 13:37:34,570 | INFO     | all workflow threads have been joined
[2025-12-05 08:37:34] 2025-12-05 13:37:34,570 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-05 08:37:34] 2025-12-05 13:37:34,570 | INFO     | traces error code: 0
[2025-12-05 08:37:34] 2025-12-05 13:37:34,571 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-05 08:37:34] 2025-12-05 13:37:34,723 [wrapper] ==== pilot stdout END ====
[2025-12-05 08:37:34] 2025-12-05 13:37:34,727 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-05 08:37:34] 2025-12-05 13:37:34,734 [wrapper] pilotpid: 2579480
[2025-12-05 08:37:34] 2025-12-05 13:37:34,737 [wrapper] Pilot exit status: 0
[2025-12-05 08:37:34] 2025-12-05 13:37:34,746 [wrapper] pandaids: 6898362922
[2025-12-05 08:37:34] 2025-12-05 13:37:34,856 [wrapper] cleanup supervisor_pilot   75675 2579481
[2025-12-05 08:37:34] 2025-12-05 13:37:34,861 [wrapper] Test setup, not cleaning
[2025-12-05 08:37:34] 2025-12-05 13:37:34,865 [wrapper] apfmon messages muted
[2025-12-05 08:37:34] 2025-12-05 13:37:34,869 [wrapper] ==== wrapper stdout END ====
[2025-12-05 08:37:34] 2025-12-05 13:37:34,872 [wrapper] ==== wrapper stderr END ====
[2025-12-05 08:37:34]  *** Error codes and diagnostics ***
[2025-12-05 08:37:34]     "exeErrorCode": 0,
[2025-12-05 08:37:34]     "exeErrorDiag": "",
[2025-12-05 08:37:34]     "pilotErrorCode": 0,
[2025-12-05 08:37:34]     "pilotErrorDiag": "",
[2025-12-05 08:37:34]  *** Listing of results directory ***
[2025-12-05 08:37:34] total 1328920
[2025-12-05 08:37:34] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 10:45 pilot3.tar.gz
[2025-12-05 08:37:34] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 10:51 queuedata.json
[2025-12-05 08:37:34] -rwx------. 1 boincer umatlas     36292 Nov 26 10:53 runpilot2-wrapper.sh
[2025-12-05 08:37:34] -rw-r--r--. 1 boincer umatlas       100 Dec  4 08:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-05 08:37:34] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  4 08:27 run_atlas
[2025-12-05 08:37:34] -rw-r--r--. 1 boincer umatlas       105 Dec  4 08:27 job.xml
[2025-12-05 08:37:34] -rw-r--r--. 2 boincer umatlas 409913138 Dec  4 08:27 EVNT.47483658._003198.pool.root.1
[2025-12-05 08:37:34] -rw-r--r--. 2 boincer umatlas     15847 Dec  4 08:27 start_atlas.sh
[2025-12-05 08:37:34] drwxrwx--x. 2 boincer umatlas      4096 Dec  4 08:27 shared
[2025-12-05 08:37:34] -rw-r--r--. 2 boincer umatlas    590106 Dec  4 08:27 input.tar.gz
[2025-12-05 08:37:34] -rw-r--r--. 1 boincer umatlas         0 Dec  4 08:27 boinc_lockfile
[2025-12-05 08:37:34] -rw-r--r--. 1 boincer umatlas      2786 Dec  4 08:27 pandaJob.out
[2025-12-05 08:37:34] -rw-------. 1 boincer umatlas        57 Dec  4 08:27 setup.sh.local
[2025-12-05 08:37:34] -rw-------. 1 boincer umatlas    985564 Dec  4 08:27 agis_schedconf.cvmfs.json
[2025-12-05 08:37:34] drwx------. 5 boincer umatlas      4096 Dec  4 08:27 pilot3
[2025-12-05 08:37:34] -rw-r--r--. 1 boincer umatlas       533 Dec  5 08:15 boinc_task_state.xml
[2025-12-05 08:37:34] -rw-r--r--. 1 boincer umatlas      6879 Dec  5 08:30 init_data.xml
[2025-12-05 08:37:34] -rw-------. 1 boincer umatlas 921464487 Dec  5 08:36 HITS.47556173._001545.pool.root.1
[2025-12-05 08:37:34] -rw-------. 1 boincer umatlas        95 Dec  5 08:36 pilot_heartbeat.json
[2025-12-05 08:37:34] -rw-------. 1 boincer umatlas      1059 Dec  5 08:36 memory_monitor_summary.json
[2025-12-05 08:37:34] -rw-------. 1 boincer umatlas   1516240 Dec  5 08:36 agis_ddmendpoints.agis.ALL.json
[2025-12-05 08:37:34] -rw-------. 1 boincer umatlas   2508589 Dec  5 08:36 log.47556173._001545.job.log.tgz.1
[2025-12-05 08:37:34] -rw-------. 1 boincer umatlas      8618 Dec  5 08:36 heartbeat.json
[2025-12-05 08:37:34] -rw-r--r--. 1 boincer umatlas      8192 Dec  5 08:37 boinc_mmap_file
[2025-12-05 08:37:34] -rw-r--r--. 1 boincer umatlas        29 Dec  5 08:37 wrapper_checkpoint.txt
[2025-12-05 08:37:34] -rw-------. 1 boincer umatlas      4824 Dec  5 08:37 pilotlog.txt
[2025-12-05 08:37:34] -rw-------. 1 boincer umatlas  10254016 Dec  5 08:37 log.47556173._001545.job.log.1
[2025-12-05 08:37:34] -rw-------. 1 boincer umatlas       353 Dec  5 08:37 output.list
[2025-12-05 08:37:34] -rw-r--r--. 1 boincer umatlas       620 Dec  5 08:37 runtime_log
[2025-12-05 08:37:34] -rw-------. 1 boincer umatlas  12779520 Dec  5 08:37 result.tar.gz
[2025-12-05 08:37:34] -rw-r--r--. 1 boincer umatlas      9348 Dec  5 08:37 runtime_log.err
[2025-12-05 08:37:34] -rw-------. 1 boincer umatlas       661 Dec  5 08:37 G4aLDm20Wi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmj6MKDmtrpJzn.diag
[2025-12-05 08:37:34] -rw-r--r--. 1 boincer umatlas     21323 Dec  5 08:37 stderr.txt
[2025-12-05 08:37:35] HITS file was successfully produced:
[2025-12-05 08:37:35] -rw-------. 1 boincer umatlas 921464487 Dec  5 08:36 shared/HITS.pool.root.1
[2025-12-05 08:37:35]  *** Contents of shared directory: ***
[2025-12-05 08:37:35] total 1313260
[2025-12-05 08:37:35] -rw-r--r--. 2 boincer umatlas 409913138 Dec  4 08:27 ATLAS.root_0
[2025-12-05 08:37:35] -rw-r--r--. 2 boincer umatlas     15847 Dec  4 08:27 start_atlas.sh
[2025-12-05 08:37:35] -rw-r--r--. 2 boincer umatlas    590106 Dec  4 08:27 input.tar.gz
[2025-12-05 08:37:35] -rw-------. 1 boincer umatlas 921464487 Dec  5 08:36 HITS.pool.root.1
[2025-12-05 08:37:35] -rw-------. 1 boincer umatlas  12779520 Dec  5 08:37 result.tar.gz
08:37:36 (2575793): run_atlas exited; CPU time 281886.045292
08:37:36 (2575793): called boinc_finish(0)

</stderr_txt>
]]>

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