Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
22:13:30 (68910): wrapper (7.7.26015): starting
22:13:30 (68910): wrapper: running run_atlas (--nthreads 6)
[2025-12-03 22:13:30] Arguments: --nthreads 6
[2025-12-03 22:13:30] Threads: 6
[2025-12-03 22:13:30] Checking for CVMFS
[2025-12-03 22:13:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-03 22:13:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-03 22:13:31] Running cvmfs_config stat atlas.cern.ch
[2025-12-03 22:13:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-03 22:13:32] 2.11.5.0 7596 13 49256 153612 2 110 3905772 4194305 2332 130560 0 190084 99.991 2823 435 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.3.250:3128 1
[2025-12-03 22:13:32] CVMFS is ok
[2025-12-03 22:13:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-03 22:13:32] Checking for apptainer binary...
[2025-12-03 22:13:32] apptainer is not installed, using version from CVMFS
[2025-12-03 22:13:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-03 22:13:36] boinc-b450f
[2025-12-03 22:13:36] apptainer works
[2025-12-03 22:13:36] Set ATHENA_PROC_NUMBER=6
[2025-12-03 22:13:36] Set ATHENA_CORE_NUMBER=6
[2025-12-03 22:13:36] Starting ATLAS job with PandaID=6892522336
[2025-12-03 22:13:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-04 08:16:29]  *** The last 200 lines of the pilot log: ***
[2025-12-04 08:16:29] 2025-12-04 07:16:03,144 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6892522336/memory_monitor_summary.json (trf name=prmon)
[2025-12-04 08:16:29] 2025-12-04 07:16:03,209 | INFO     | number of running child processes to parent process 91708: 1
[2025-12-04 08:16:29] 2025-12-04 07:16:03,209 | INFO     | maximum number of monitored processes: 14
[2025-12-04 08:16:29] 2025-12-04 07:16:04,771 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-04 08:16:29] 2025-12-04 07:16:04,773 | INFO     | found 12 cores (12 cores per socket, 1 socket) HT, CPU MHz: 3864.660791666667
[2025-12-04 08:16:29] 2025-12-04 07:16:04,775 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6892522336/memory_monitor_summary.json (trf name=prmon)
[2025-12-04 08:16:29] 2025-12-04 07:16:04,776 | INFO     | extracted standard info from prmon json
[2025-12-04 08:16:29] 2025-12-04 07:16:04,776 | INFO     | extracted standard memory fields from prmon json
[2025-12-04 08:16:29] 2025-12-04 07:16:04,776 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-04 08:16:29] 2025-12-04 07:16:04,783 | INFO     | fitting pss+swap vs Time
[2025-12-04 08:16:29] 2025-12-04 07:16:04,783 | INFO     | sum of square deviations: 64008790840.0
[2025-12-04 08:16:29] 2025-12-04 07:16:04,789 | INFO     | sum of deviations: 434544113085.00006
[2025-12-04 08:16:29] 2025-12-04 07:16:04,789 | INFO     | mean x: 1764814529.0
[2025-12-04 08:16:29] 2025-12-04 07:16:04,790 | INFO     | mean y: 2576338.8984771576
[2025-12-04 08:16:29] 2025-12-04 07:16:04,790 | INFO     | intersect: -11978430554.057652
[2025-12-04 08:16:29] 2025-12-04 07:16:04,790 | INFO     | chi2: 3.343629925114917
[2025-12-04 08:16:29] 2025-12-04 07:16:04,791 | INFO     | sum of square deviations: 62397904822.5
[2025-12-04 08:16:29] 2025-12-04 07:16:04,797 | INFO     | sum of deviations: 535237689807.49994
[2025-12-04 08:16:29] 2025-12-04 07:16:04,797 | INFO     | mean x: 1764814376.5
[2025-12-04 08:16:29] 2025-12-04 07:16:04,797 | INFO     | mean y: 2585846.5887372014
[2025-12-04 08:16:29] 2025-12-04 07:16:04,797 | INFO     | intersect: -15135665549.895857
[2025-12-04 08:16:29] 2025-12-04 07:16:04,797 | INFO     | chi2: 1.8972473377697605
[2025-12-04 08:16:29] 2025-12-04 07:16:04,798 | INFO     | current chi2=1.8972473377697605 (change=43.257855077829696 %)
[2025-12-04 08:16:29] 2025-12-04 07:16:04,798 | INFO     | sum of square deviations: 60814275130.0
[2025-12-04 08:16:29] 2025-12-04 07:16:04,804 | INFO     | sum of deviations: 523875222644.00006
[2025-12-04 08:16:29] 2025-12-04 07:16:04,804 | INFO     | mean x: 1764814224.0
[2025-12-04 08:16:29] 2025-12-04 07:16:04,804 | INFO     | mean y: 2584752.4113597246
[2025-12-04 08:16:29] 2025-12-04 07:16:04,804 | INFO     | intersect: -15200136032.255472
[2025-12-04 08:16:29] 2025-12-04 07:16:04,805 | INFO     | chi2: 1.8972710810857247
[2025-12-04 08:16:29] 2025-12-04 07:16:04,805 | INFO     | current chi2=1.8972710810857247 (change=-0.0012514612877059209 %)
[2025-12-04 08:16:29] 2025-12-04 07:16:04,805 | INFO     | right removable region: 580
[2025-12-04 08:16:29] 2025-12-04 07:16:04,805 | INFO     | sum of square deviations: 62397904822.5
[2025-12-04 08:16:29] 2025-12-04 07:16:04,812 | INFO     | sum of deviations: 314706896236.5002
[2025-12-04 08:16:29] 2025-12-04 07:16:04,812 | INFO     | mean x: 1764814681.5
[2025-12-04 08:16:29] 2025-12-04 07:16:04,812 | INFO     | mean y: 2587650.2406143346
[2025-12-04 08:16:29] 2025-12-04 07:16:04,812 | INFO     | intersect: -8898341834.930204
[2025-12-04 08:16:29] 2025-12-04 07:16:04,812 | INFO     | chi2: 1.5333498152425393
[2025-12-04 08:16:29] 2025-12-04 07:16:04,812 | INFO     | current chi2=1.5333498152425393 (change=54.14116246163697 %)
[2025-12-04 08:16:29] 2025-12-04 07:16:04,813 | INFO     | sum of square deviations: 60814275130.0
[2025-12-04 08:16:29] 2025-12-04 07:16:04,819 | INFO     | sum of deviations: 287359958939.00006
[2025-12-04 08:16:29] 2025-12-04 07:16:04,819 | INFO     | mean x: 1764814834.0
[2025-12-04 08:16:29] 2025-12-04 07:16:04,819 | INFO     | mean y: 2590281.934595525
[2025-12-04 08:16:29] 2025-12-04 07:16:04,819 | INFO     | intersect: -8336522815.263284
[2025-12-04 08:16:29] 2025-12-04 07:16:04,820 | INFO     | chi2: 1.4975687778639335
[2025-12-04 08:16:29] 2025-12-04 07:16:04,820 | INFO     | current chi2=1.4975687778639335 (change=2.333520832814404 %)
[2025-12-04 08:16:29] 2025-12-04 07:16:04,820 | INFO     | left removable region: 20
[2025-12-04 08:16:29] 2025-12-04 07:16:04,820 | INFO     | sum of square deviations: 54455421020.0
[2025-12-04 08:16:29] 2025-12-04 07:16:04,826 | INFO     | sum of deviations: 342616339208.5
[2025-12-04 08:16:29] 2025-12-04 07:16:04,826 | INFO     | mean x: 1764814803.5
[2025-12-04 08:16:29] 2025-12-04 07:16:04,826 | INFO     | mean y: 2602368.1339285714
[2025-12-04 08:16:29] 2025-12-04 07:16:04,826 | INFO     | intersect: -11101055927.59507
[2025-12-04 08:16:29] 2025-12-04 07:16:04,827 | INFO     | chi2: 0.030270109694809724
[2025-12-04 08:16:29] 2025-12-04 07:16:04,827 | INFO     | current memory leak: 6.29 B/s (using 560 data points, chi2=0.03)
[2025-12-04 08:16:29] 2025-12-04 07:16:04,827 | INFO     | could have reported an average CPU frequency of 3864 MHz (23 samples)
[2025-12-04 08:16:29] 2025-12-04 07:16:04,827 | INFO     | ..............................
[2025-12-04 08:16:29] 2025-12-04 07:16:04,827 | INFO     | . Timing measurements:
[2025-12-04 08:16:29] 2025-12-04 07:16:04,827 | INFO     | . get job = 0 s
[2025-12-04 08:16:29] 2025-12-04 07:16:04,827 | INFO     | . initial setup = 3 s
[2025-12-04 08:16:29] 2025-12-04 07:16:04,827 | INFO     | . payload setup = 19 s
[2025-12-04 08:16:29] 2025-12-04 07:16:04,827 | INFO     | . stage-in = 0 s
[2025-12-04 08:16:29] 2025-12-04 07:16:04,827 | INFO     | . payload execution = 36038 s
[2025-12-04 08:16:29] 2025-12-04 07:16:04,828 | INFO     | . stage-out = 2 s
[2025-12-04 08:16:29] 2025-12-04 07:16:04,828 | INFO     | . log creation = 0 s
[2025-12-04 08:16:29] 2025-12-04 07:16:04,828 | INFO     | ..............................
[2025-12-04 08:16:29] 2025-12-04 07:16:04,954 | INFO     | time since job start (36105s) is within the limit (172800.0s)
[2025-12-04 08:16:29] 2025-12-04 07:16:05,173 | INFO     | 
[2025-12-04 08:16:29] 2025-12-04 07:16:05,173 | INFO     | job summary report
[2025-12-04 08:16:29] 2025-12-04 07:16:05,174 | INFO     | --------------------------------------------------
[2025-12-04 08:16:29] 2025-12-04 07:16:05,174 | INFO     | PanDA job id: 6892522336
[2025-12-04 08:16:29] 2025-12-04 07:16:05,174 | INFO     | task id: 47493029
[2025-12-04 08:16:29] 2025-12-04 07:16:05,174 | INFO     | errors: (none)
[2025-12-04 08:16:29] 2025-12-04 07:16:05,174 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-04 08:16:29] 2025-12-04 07:16:05,174 | INFO     | pilot state: finished 
[2025-12-04 08:16:29] 2025-12-04 07:16:05,174 | INFO     | transexitcode: 0
[2025-12-04 08:16:29] 2025-12-04 07:16:05,174 | INFO     | exeerrorcode: 0
[2025-12-04 08:16:29] 2025-12-04 07:16:05,174 | INFO     | exeerrordiag: 
[2025-12-04 08:16:29] 2025-12-04 07:16:05,174 | INFO     | exitcode: 0
[2025-12-04 08:16:29] 2025-12-04 07:16:05,174 | INFO     | exitmsg: OK
[2025-12-04 08:16:29] 2025-12-04 07:16:05,174 | INFO     | cpuconsumptiontime: 168798 s
[2025-12-04 08:16:29] 2025-12-04 07:16:05,174 | INFO     | nevents: 1000
[2025-12-04 08:16:29] 2025-12-04 07:16:05,174 | INFO     | neventsw: 0
[2025-12-04 08:16:29] 2025-12-04 07:16:05,174 | INFO     | pid: 91708
[2025-12-04 08:16:29] 2025-12-04 07:16:05,174 | INFO     | pgrp: 91708
[2025-12-04 08:16:29] 2025-12-04 07:16:05,174 | INFO     | corecount: 6
[2025-12-04 08:16:29] 2025-12-04 07:16:05,174 | INFO     | event service: False
[2025-12-04 08:16:29] 2025-12-04 07:16:05,174 | INFO     | sizes: {0: 2284136, 1: 2284335, 12: 2284335, 16: 2284625, 22: 2284653, 36062: 2326220, 36065: 2335228, 36067: 2335284, 36070: 2335530}
[2025-12-04 08:16:29] 2025-12-04 07:16:05,175 | INFO     | --------------------------------------------------
[2025-12-04 08:16:29] 2025-12-04 07:16:05,175 | INFO     | 
[2025-12-04 08:16:29] 2025-12-04 07:16:05,175 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2025-12-04 08:16:29] 2025-12-04 07:16:05,200 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-04 08:16:29] 2025-12-04 07:16:05,201 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-04 08:16:29] 2025-12-04 07:16:05,201 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-04 08:16:29] 2025-12-04 07:16:05,201 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-04 08:16:29] 2025-12-04 07:16:05,201 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-04 08:16:29] 2025-12-04 07:16:05,201 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-04 08:16:29] 2025-12-04 07:16:05,201 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-04 08:16:29] 2025-12-04 07:16:05,201 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-04 08:16:29] 2025-12-04 07:16:05,201 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-04 08:16:29] 2025-12-04 07:16:05,201 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-04 08:16:29] 2025-12-04 07:16:05,201 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-04 08:16:29] 2025-12-04 07:16:05,201 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-04 08:16:29] 2025-12-04 07:16:05,201 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-04 08:16:29] 2025-12-04 07:16:05,201 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-04 08:16:29] 2025-12-04 07:16:05,201 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-04 08:16:29] 2025-12-04 07:16:05,201 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-04 08:16:29] 2025-12-04 07:16:05,201 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-04 08:16:29] 2025-12-04 07:16:05,201 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-04 08:16:29] 2025-12-04 07:16:05,202 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-04 08:16:29] 2025-12-04 07:16:05,202 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-04 08:16:29] 2025-12-04 07:16:05,202 | INFO     | job 6892522336 has completed (purged errors)
[2025-12-04 08:16:29] 2025-12-04 07:16:05,202 | INFO     | overall cleanup function is called
[2025-12-04 08:16:29] 2025-12-04 07:16:06,208 | INFO     | --- collectZombieJob: --- 10, [91708]
[2025-12-04 08:16:29] 2025-12-04 07:16:06,208 | INFO     | zombie collector waiting for pid 91708
[2025-12-04 08:16:29] 2025-12-04 07:16:06,208 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-04 08:16:29] 2025-12-04 07:16:06,208 | INFO     | collected zombie processes
[2025-12-04 08:16:29] 2025-12-04 07:16:06,208 | INFO     | will attempt to kill all subprocesses of pid=91708
[2025-12-04 08:16:29] 2025-12-04 07:16:06,272 | INFO     | process IDs to be killed: [91708] (in reverse order)
[2025-12-04 08:16:29] 2025-12-04 07:16:06,294 | WARNING  | found no corresponding commands to process id(s)
[2025-12-04 08:16:29] 2025-12-04 07:16:06,294 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-04 08:16:29] 2025-12-04 07:16:06,296 | INFO     | did not find any defunct processes belonging to 91708
[2025-12-04 08:16:29] 2025-12-04 07:16:06,298 | INFO     | did not find any defunct processes belonging to 91708
[2025-12-04 08:16:29] 2025-12-04 07:16:06,298 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-04 08:16:29] 2025-12-04 07:16:06,298 | INFO     | ready for new job
[2025-12-04 08:16:29] 2025-12-04 07:16:06,298 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-04 08:16:29] 2025-12-04 07:16:06,299 | INFO     | ***************************************
[2025-12-04 08:16:29] 2025-12-04 07:16:06,299 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-04 08:16:29] 2025-12-04 07:16:06,299 | INFO     | ***************************************
[2025-12-04 08:16:29] 2025-12-04 07:16:06,299 | INFO     | 
[2025-12-04 08:16:29] 2025-12-04 07:16:06,300 | INFO     | architecture information:
[2025-12-04 08:16:29] 2025-12-04 07:16:06,300 | INFO     | executing command: cat /etc/os-release
[2025-12-04 08:16:29] 2025-12-04 07:16:06,305 | INFO     | cat /etc/os-release:
[2025-12-04 08:16:29] NAME="CentOS Linux"
[2025-12-04 08:16:29] VERSION="7 (Core)"
[2025-12-04 08:16:29] ID="centos"
[2025-12-04 08:16:29] ID_LIKE="rhel fedora"
[2025-12-04 08:16:29] VERSION_ID="7"
[2025-12-04 08:16:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-04 08:16:29] ANSI_COLOR="0;31"
[2025-12-04 08:16:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-04 08:16:29] HOME_URL="https://www.centos.org/"
[2025-12-04 08:16:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-04 08:16:29] 
[2025-12-04 08:16:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-04 08:16:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-04 08:16:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-04 08:16:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-04 08:16:29] 
[2025-12-04 08:16:29] 2025-12-04 07:16:06,305 | INFO     | ***************************************
[2025-12-04 08:16:29] 2025-12-04 07:16:06,808 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2025-12-04 08:16:29] 2025-12-04 07:16:06,815 | INFO     | sufficient remaining disk space (19223543808 B)
[2025-12-04 08:16:29] 2025-12-04 07:16:06,815 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-04 08:16:29] 2025-12-04 07:16:06,816 | INFO     | current server update state: UPDATING_FINAL
[2025-12-04 08:16:29] 2025-12-04 07:16:06,816 | INFO     | update_server=False
[2025-12-04 08:16:29] 2025-12-04 07:16:06,816 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-04 08:16:29] 2025-12-04 07:16:06,816 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-04 08:16:29] 2025-12-04 07:16:06,816 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-04 08:16:29] 2025-12-04 07:16:06,816 | INFO     | found 0 job(s) in 20 queues
[2025-12-04 08:16:29] 2025-12-04 07:16:06,816 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-04 08:16:29] 2025-12-04 07:16:06,816 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-04 08:16:29] 2025-12-04 07:16:06,816 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-04 08:16:29] 2025-12-04 07:16:06,816 | INFO     | aborting loop
[2025-12-04 08:16:29] 2025-12-04 07:16:06,932 | INFO     | all data control threads have been joined
[2025-12-04 08:16:29] 2025-12-04 07:16:07,048 | INFO     | all payload control threads have been joined
[2025-12-04 08:16:29] 2025-12-04 07:16:07,818 | INFO     | [job] queue monitor thread has finished
[2025-12-04 08:16:29] 2025-12-04 07:16:07,818 | INFO     | [job] job monitor thread has finished
[2025-12-04 08:16:29] 2025-12-04 07:16:07,821 | INFO     | [job] retrieve thread has finished
[2025-12-04 08:16:29] 2025-12-04 07:16:07,938 | INFO     | [data] control thread has finished
[2025-12-04 08:16:29] 2025-12-04 07:16:07,984 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-04 08:16:29] 2025-12-04 07:16:08,053 | INFO     | [payload] control thread has finished
[2025-12-04 08:16:29] 2025-12-04 07:16:08,056 | INFO     | [payload] failed_post thread has finished
[2025-12-04 08:16:29] 2025-12-04 07:16:08,166 | INFO     | [job] validate thread has finished
[2025-12-04 08:16:29] 2025-12-04 07:16:08,336 | INFO     | [payload] validate_pre thread has finished
[2025-12-04 08:16:29] 2025-12-04 07:16:08,344 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-04 08:16:29] 2025-12-04 07:16:08,425 | INFO     | all job control threads have been joined
[2025-12-04 08:16:29] 2025-12-04 07:16:08,536 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-04 08:16:29] 2025-12-04 07:16:08,546 | INFO     | [payload] execute_payloads thread has finished
[2025-12-04 08:16:29] 2025-12-04 07:16:08,848 | INFO     | [data] copytool_in thread has finished
[2025-12-04 08:16:29] 2025-12-04 07:16:08,848 | INFO     | [job] create_data_payload thread has finished
[2025-12-04 08:16:29] 2025-12-04 07:16:09,398 | INFO     | [payload] validate_post thread has finished
[2025-12-04 08:16:29] 2025-12-04 07:16:09,428 | INFO     | [job] control thread has finished
[2025-12-04 08:16:29] 2025-12-04 07:16:09,989 | INFO     | [data] copytool_out thread has finished
[2025-12-04 08:16:29] 2025-12-04 07:16:12,348 | INFO     | [data] queue_monitor thread has finished
[2025-12-04 08:16:29] 2025-12-04 07:16:22,868 | INFO     | [monitor] cgroup control has ended
[2025-12-04 08:16:29] 2025-12-04 07:16:24,028 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140451374233408)>', '<ExcThread(monitor, started 140450841216768)>']
[2025-12-04 08:16:29] 2025-12-04 07:16:24,898 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-04 08:16:29] 2025-12-04 07:16:24,898 | INFO     | [monitor] control thread has ended
[2025-12-04 08:16:29] 2025-12-04 07:16:29,048 | INFO     | all workflow threads have been joined
[2025-12-04 08:16:29] 2025-12-04 07:16:29,048 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-04 08:16:29] 2025-12-04 07:16:29,048 | INFO     | traces error code: 0
[2025-12-04 08:16:29] 2025-12-04 07:16:29,048 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-04 08:16:29] 2025-12-04 07:16:29,103 [wrapper] ==== pilot stdout END ====
[2025-12-04 08:16:29] 2025-12-04 07:16:29,104 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-04 08:16:29] 2025-12-04 07:16:29,105 [wrapper] pilotpid: 78059
[2025-12-04 08:16:29] 2025-12-04 07:16:29,106 [wrapper] Pilot exit status: 0
[2025-12-04 08:16:29] 2025-12-04 07:16:29,111 [wrapper] pandaids: 6892522336
[2025-12-04 08:16:29] 2025-12-04 07:16:29,125 [wrapper] cleanup supervisor_pilot  312370 78060
[2025-12-04 08:16:29] 2025-12-04 07:16:29,126 [wrapper] Test setup, not cleaning
[2025-12-04 08:16:29] 2025-12-04 07:16:29,127 [wrapper] apfmon messages muted
[2025-12-04 08:16:29] 2025-12-04 07:16:29,128 [wrapper] ==== wrapper stdout END ====
[2025-12-04 08:16:29] 2025-12-04 07:16:29,129 [wrapper] ==== wrapper stderr END ====
[2025-12-04 08:16:29]  *** Error codes and diagnostics ***
[2025-12-04 08:16:29]     "exeErrorCode": 0,
[2025-12-04 08:16:29]     "exeErrorDiag": "",
[2025-12-04 08:16:29]     "pilotErrorCode": 0,
[2025-12-04 08:16:29]     "pilotErrorDiag": "",
[2025-12-04 08:16:29]  *** Listing of results directory ***
[2025-12-04 08:16:29] total 1309549
[2025-12-04 08:16:29] -rw-r--r-- 1 boinc boinc    576529 Nov 19 08:00 pilot3.tar.gz
[2025-12-04 08:16:29] -rw-r--r-- 1 boinc boinc      5112 Nov 19 08:04 queuedata.json
[2025-12-04 08:16:29] -rwx------ 1 boinc boinc     36292 Nov 19 08:05 runpilot2-wrapper.sh
[2025-12-04 08:16:29] -rw-r--r-- 1 boinc boinc       100 Dec  3 22:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-04 08:16:29] -rwxr-xr-x 1 boinc boinc      7986 Dec  3 22:13 run_atlas
[2025-12-04 08:16:29] -rw-r--r-- 1 boinc boinc       105 Dec  3 22:13 job.xml
[2025-12-04 08:16:29] -rw-r--r-- 2 boinc boinc     15120 Dec  3 22:13 start_atlas.sh
[2025-12-04 08:16:29] drwxrwx--x 2 boinc boinc         5 Dec  3 22:13 shared
[2025-12-04 08:16:29] -rw-r--r-- 2 boinc boinc    590103 Dec  3 22:13 input.tar.gz
[2025-12-04 08:16:29] -rw-r--r-- 1 boinc boinc      6795 Dec  3 22:13 init_data.xml
[2025-12-04 08:16:29] -rw-r--r-- 2 boinc boinc 409827908 Dec  3 22:13 EVNT.47493027._000035.pool.root.1
[2025-12-04 08:16:29] -rw-r--r-- 1 boinc boinc         0 Dec  3 22:13 boinc_lockfile
[2025-12-04 08:16:29] -rw-r--r-- 1 boinc boinc      2771 Dec  3 22:13 pandaJob.out
[2025-12-04 08:16:29] -rw------- 1 boinc boinc    985959 Dec  3 22:14 agis_schedconf.cvmfs.json
[2025-12-04 08:16:29] drwx------ 5 boinc boinc        22 Dec  3 22:14 pilot3
[2025-12-04 08:16:29] -rw-r--r-- 1 boinc boinc       533 Dec  4 08:11 boinc_task_state.xml
[2025-12-04 08:16:29] -rw------- 1 boinc boinc 927021386 Dec  4 08:15 HITS.47493029._000326.pool.root.1
[2025-12-04 08:16:29] -rw------- 1 boinc boinc        95 Dec  4 08:15 pilot_heartbeat.json
[2025-12-04 08:16:29] -rw-r--r-- 1 boinc boinc        29 Dec  4 08:15 wrapper_checkpoint.txt
[2025-12-04 08:16:29] -rw------- 1 boinc boinc      1042 Dec  4 08:15 memory_monitor_summary.json
[2025-12-04 08:16:29] -rw------- 1 boinc boinc   1516240 Dec  4 08:15 agis_ddmendpoints.agis.ALL.json
[2025-12-04 08:16:29] -rw------- 1 boinc boinc   1583314 Dec  4 08:15 log.47493029._000326.job.log.tgz.1
[2025-12-04 08:16:29] -rw------- 1 boinc boinc      8586 Dec  4 08:16 heartbeat.json
[2025-12-04 08:16:29] -rw------- 1 boinc boinc      4559 Dec  4 08:16 pilotlog.txt
[2025-12-04 08:16:29] -rw------- 1 boinc boinc   5045008 Dec  4 08:16 log.47493029._000326.job.log.1
[2025-12-04 08:16:29] -rw-r--r-- 1 boinc boinc      8192 Dec  4 08:16 boinc_mmap_file
[2025-12-04 08:16:29] -rw------- 1 boinc boinc       353 Dec  4 08:16 output.list
[2025-12-04 08:16:29] -rw-r--r-- 1 boinc boinc      8803 Dec  4 08:16 runtime_log.err
[2025-12-04 08:16:29] -rw-r--r-- 1 boinc boinc       620 Dec  4 08:16 runtime_log
[2025-12-04 08:16:29] -rw------- 1 boinc boinc   6645760 Dec  4 08:16 result.tar.gz
[2025-12-04 08:16:29] -rw------- 1 boinc boinc       668 Dec  4 08:16 LILODm6Qrf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmcpFKDmpHkDom.diag
[2025-12-04 08:16:29] -rw-r--r-- 1 boinc boinc     20954 Dec  4 08:16 stderr.txt
[2025-12-04 08:16:29] HITS file was successfully produced:
[2025-12-04 08:16:29] -rw------- 1 boinc boinc 927021386 Dec  4 08:15 shared/HITS.pool.root.1
[2025-12-04 08:16:29]  *** Contents of shared directory: ***
[2025-12-04 08:16:29] total 1306907
[2025-12-04 08:16:29] -rw-r--r-- 2 boinc boinc     15120 Dec  3 22:13 start_atlas.sh
[2025-12-04 08:16:29] -rw-r--r-- 2 boinc boinc    590103 Dec  3 22:13 input.tar.gz
[2025-12-04 08:16:29] -rw-r--r-- 2 boinc boinc 409827908 Dec  3 22:13 ATLAS.root_0
[2025-12-04 08:16:29] -rw------- 1 boinc boinc 927021386 Dec  4 08:15 HITS.pool.root.1
[2025-12-04 08:16:29] -rw------- 1 boinc boinc   6645760 Dec  4 08:16 result.tar.gz
08:16:30 (68910): run_atlas exited; CPU time 169158.368879
08:16:30 (68910): called boinc_finish(0)

</stderr_txt>
]]>

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