Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:11:39 (1952213): wrapper (7.7.26015): starting
04:11:39 (1952213): wrapper: running run_atlas (--nthreads 3)
[2025-12-05 04:11:39] Arguments: --nthreads 3
[2025-12-05 04:11:39] Threads: 3
[2025-12-05 04:11:39] Checking for CVMFS
[2025-12-05 04:11:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-05 04:11:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-05 04:11:39] Running cvmfs_config stat atlas.cern.ch
[2025-12-05 04:11:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-05 04:11:39] 2.9.2.0 2923852 23817 101380 153639 3 90 20095390 36864001 0 130560 2 8947064 99.960 997224 740 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-05 04:11:39] CVMFS is ok
[2025-12-05 04:11:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-05 04:11:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-05 04:11:39] Further information can be found at the LHC@home message board.
[2025-12-05 04:11:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-05 04:11:39] Checking for apptainer binary...
[2025-12-05 04:11:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-05 04:11:39] Running /usr/bin/apptainer --version
[2025-12-05 04:11:39] apptainer version 1.4.1-1.1
[2025-12-05 04:11:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-05 04:11:39] magicA161a
[2025-12-05 04:11:39] apptainer works
[2025-12-05 04:11:39] Set ATHENA_PROC_NUMBER=3
[2025-12-05 04:11:39] Set ATHENA_CORE_NUMBER=3
[2025-12-05 04:11:39] Starting ATLAS job with PandaID=6901249343
[2025-12-05 04:11:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-05 10:52:24]  *** The last 200 lines of the pilot log: ***
[2025-12-05 10:52:24] 2025-12-05 09:51:53,044 | INFO     | ***************************************
[2025-12-05 10:52:24] 2025-12-05 09:51:53,044 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-05 10:52:24] 2025-12-05 09:51:53,044 | INFO     | ***************************************
[2025-12-05 10:52:24] 2025-12-05 09:51:53,044 | INFO     | 
[2025-12-05 10:52:24] 2025-12-05 09:51:53,045 | INFO     | architecture information:
[2025-12-05 10:52:24] 2025-12-05 09:51:53,045 | INFO     | executing command: cat /etc/os-release
[2025-12-05 10:52:24] 2025-12-05 09:51:53,053 | INFO     | cat /etc/os-release:
[2025-12-05 10:52:24] NAME="CentOS Linux"
[2025-12-05 10:52:24] VERSION="7 (Core)"
[2025-12-05 10:52:24] ID="centos"
[2025-12-05 10:52:24] ID_LIKE="rhel fedora"
[2025-12-05 10:52:24] VERSION_ID="7"
[2025-12-05 10:52:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-05 10:52:24] ANSI_COLOR="0;31"
[2025-12-05 10:52:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-05 10:52:24] HOME_URL="https://www.centos.org/"
[2025-12-05 10:52:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-05 10:52:24] 
[2025-12-05 10:52:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-05 10:52:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-05 10:52:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-05 10:52:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-05 10:52:24] 
[2025-12-05 10:52:24] 2025-12-05 09:51:53,053 | INFO     | ***************************************
[2025-12-05 10:52:24] 2025-12-05 09:51:53,557 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-05 10:52:24] 2025-12-05 09:51:53,569 | INFO     | sufficient remaining disk space (385004601344 B)
[2025-12-05 10:52:24] 2025-12-05 09:51:53,569 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-05 10:52:24] 2025-12-05 09:51:53,569 | INFO     | current server update state: UPDATING_FINAL
[2025-12-05 10:52:24] 2025-12-05 09:51:53,569 | INFO     | update_server=False
[2025-12-05 10:52:24] 2025-12-05 09:51:53,569 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-05 10:52:24] 2025-12-05 09:51:53,569 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-05 10:52:24] 2025-12-05 09:51:53,570 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-05 10:52:24] 2025-12-05 09:51:53,570 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-05 10:52:24] 2025-12-05 09:51:53,570 | INFO     | aborting loop
[2025-12-05 10:52:24] 2025-12-05 09:51:53,921 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-05 10:52:24] 2025-12-05 09:51:53,963 | INFO     | all data control threads have been joined
[2025-12-05 10:52:24] 2025-12-05 09:51:54,571 | INFO     | [job] job monitor thread has finished
[2025-12-05 10:52:24] 2025-12-05 09:51:54,575 | INFO     | [job] retrieve thread has finished
[2025-12-05 10:52:24] 2025-12-05 09:51:54,575 | INFO     | [job] queue monitor thread has finished
[2025-12-05 10:52:24] 2025-12-05 09:51:54,777 | INFO     | all job control threads have been joined
[2025-12-05 10:52:24] 2025-12-05 09:51:54,935 | INFO     | all payload control threads have been joined
[2025-12-05 10:52:24] 2025-12-05 09:51:54,947 | INFO     | [data] copytool_in thread has finished
[2025-12-05 10:52:24] 2025-12-05 09:51:54,969 | INFO     | [data] control thread has finished
[2025-12-05 10:52:24] 2025-12-05 09:51:55,412 | INFO     | [job] create_data_payload thread has finished
[2025-12-05 10:52:24] 2025-12-05 09:51:55,452 | INFO     | [job] validate thread has finished
[2025-12-05 10:52:24] 2025-12-05 09:51:55,460 | INFO     | [payload] validate_pre thread has finished
[2025-12-05 10:52:24] 2025-12-05 09:51:55,486 | INFO     | [payload] execute_payloads thread has finished
[2025-12-05 10:52:24] 2025-12-05 09:51:55,576 | INFO     | [data] copytool_out thread has finished
[2025-12-05 10:52:24] 2025-12-05 09:51:55,782 | INFO     | [job] control thread has finished
[2025-12-05 10:52:24] 2025-12-05 09:51:55,941 | INFO     | [payload] control thread has finished
[2025-12-05 10:52:24] 2025-12-05 09:51:56,017 | INFO     | [payload] validate_post thread has finished
[2025-12-05 10:52:24] 2025-12-05 09:51:56,145 | INFO     | [payload] failed_post thread has finished
[2025-12-05 10:52:24] 2025-12-05 09:51:57,928 | INFO     | [data] queue_monitor thread has finished
[2025-12-05 10:52:24] 2025-12-05 09:52:04,211 | INFO     | job.realtimelogging is not enabled
[2025-12-05 10:52:24] 2025-12-05 09:52:05,216 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-05 10:52:24] 2025-12-05 09:52:13,516 | INFO     | [monitor] cgroup control has ended
[2025-12-05 10:52:24] 2025-12-05 09:52:15,541 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140472862443328)>', '<ExcThread(monitor, started 140471988901632)>']
[2025-12-05 10:52:24] 2025-12-05 09:52:20,543 | INFO     | all workflow threads have been joined
[2025-12-05 10:52:24] 2025-12-05 09:52:20,543 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-05 10:52:24] 2025-12-05 09:52:20,543 | INFO     | traces error code: 0
[2025-12-05 10:52:24] 2025-12-05 09:52:20,543 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-05 10:52:24] 2025-12-05 09:52:24,628 | INFO     | PID=1955935 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-05 10:52:24] 2025-12-05 09:52:24,628 | INFO     | found 0 job(s) in 20 queues
[2025-12-05 10:52:24] 2025-12-05 09:52:24,628 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-05 10:52:24] 2025-12-05 09:52:24,628 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-05 10:52:24] 2025-12-05 09:52:24,628 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-05 10:52:24] 2025-12-05 09:52:24,628 | CRITICAL | thread 'MainThread' is not alive
[2025-12-05 10:52:24] 2025-12-05 09:52:24,628 | INFO     | [monitor] control thread has ended
[2025-12-05 10:52:24] 2025-12-05 09:52:24,674 [wrapper] ==== pilot stdout END ====
[2025-12-05 10:52:24] 2025-12-05 09:52:24,676 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-05 10:52:24] 2025-12-05 09:52:24,678 [wrapper] pilotpid: 1955935
[2025-12-05 10:52:24] 2025-12-05 09:52:24,681 [wrapper] Pilot exit status: 0
[2025-12-05 10:52:24] 2025-12-05 09:52:24,687 [wrapper] pandaids: 6901249343
[2025-12-05 10:52:24] 2025-12-05 09:52:24,703 [wrapper] cleanup supervisor_pilot 2004991 1955936
[2025-12-05 10:52:24] 2025-12-05 09:52:24,705 [wrapper] Test setup, not cleaning
[2025-12-05 10:52:24] 2025-12-05 09:52:24,707 [wrapper] apfmon messages muted
[2025-12-05 10:52:24] 2025-12-05 09:52:24,710 [wrapper] ==== wrapper stdout END ====
[2025-12-05 10:52:24] 2025-12-05 09:52:24,712 [wrapper] ==== wrapper stderr END ====
[2025-12-05 10:52:24]  *** Error codes and diagnostics ***
[2025-12-05 10:52:24]     "exeErrorCode": 0,
[2025-12-05 10:52:24]     "exeErrorDiag": "",
[2025-12-05 10:52:24]     "pilotErrorCode": 0,
[2025-12-05 10:52:24]     "pilotErrorDiag": "",
[2025-12-05 10:52:24]  *** Listing of results directory ***
[2025-12-05 10:52:24] total 1067740
[2025-12-05 10:52:24] -rw-r--r-- 1 boinc boinc    576529 Nov 29 10:19 pilot3.tar.gz
[2025-12-05 10:52:24] -rwx------ 1 boinc boinc     36292 Nov 29 10:22 runpilot2-wrapper.sh
[2025-12-05 10:52:24] -rw-r--r-- 1 boinc boinc      5112 Nov 29 10:26 queuedata.json
[2025-12-05 10:52:24] -rw-r--r-- 1 boinc boinc       100 Dec  5 04:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-05 10:52:24] -rwxr-xr-x 1 boinc boinc      7986 Dec  5 04:11 run_atlas
[2025-12-05 10:52:24] -rw-r--r-- 1 boinc boinc       105 Dec  5 04:11 job.xml
[2025-12-05 10:52:24] -rw-r--r-- 2 boinc boinc 379106790 Dec  5 04:11 EVNT.47531050._000577.pool.root.1
[2025-12-05 10:52:24] -rw-r--r-- 2 boinc boinc    590120 Dec  5 04:11 input.tar.gz
[2025-12-05 10:52:24] -rw-r--r-- 2 boinc boinc     15847 Dec  5 04:11 start_atlas.sh
[2025-12-05 10:52:24] drwxrwx--x 2 boinc boinc      4096 Dec  5 04:11 shared
[2025-12-05 10:52:24] -rw-r--r-- 1 boinc boinc         0 Dec  5 04:11 boinc_setup_complete
[2025-12-05 10:52:24] -rw-r--r-- 1 boinc boinc      6449 Dec  5 04:11 init_data.xml
[2025-12-05 10:52:24] -rw-r--r-- 1 boinc boinc         0 Dec  5 04:11 boinc_lockfile
[2025-12-05 10:52:24] -rw-r--r-- 1 boinc boinc      2881 Dec  5 04:11 pandaJob.out
[2025-12-05 10:52:24] -rw------- 1 boinc boinc    985572 Dec  5 04:11 agis_schedconf.cvmfs.json
[2025-12-05 10:52:24] drwx------ 5 boinc boinc      4096 Dec  5 04:11 pilot3
[2025-12-05 10:52:24] -rw-r--r-- 1 boinc boinc       531 Dec  5 10:48 boinc_task_state.xml
[2025-12-05 10:52:24] -rw------- 1 boinc boinc 701145540 Dec  5 10:51 HITS.47531058._001927.pool.root.1
[2025-12-05 10:52:24] -rw------- 1 boinc boinc        95 Dec  5 10:51 pilot_heartbeat.json
[2025-12-05 10:52:24] -rw------- 1 boinc boinc      1020 Dec  5 10:51 memory_monitor_summary.json
[2025-12-05 10:52:24] -rw------- 1 boinc boinc   1516240 Dec  5 10:51 agis_ddmendpoints.agis.ALL.json
[2025-12-05 10:52:24] -rw------- 1 boinc boinc   1196651 Dec  5 10:51 log.47531058._001927.job.log.tgz.1
[2025-12-05 10:52:24] -rw------- 1 boinc boinc     28185 Dec  5 10:51 heartbeat.json
[2025-12-05 10:52:24] -rw-r--r-- 1 boinc boinc      8192 Dec  5 10:52 boinc_mmap_file
[2025-12-05 10:52:24] -rw-r--r-- 1 boinc boinc        28 Dec  5 10:52 wrapper_checkpoint.txt
[2025-12-05 10:52:24] -rw------- 1 boinc boinc       817 Dec  5 10:52 pilotlog.txt
[2025-12-05 10:52:24] -rw------- 1 boinc boinc   3392652 Dec  5 10:52 log.47531058._001927.job.log.1
[2025-12-05 10:52:24] -rw------- 1 boinc boinc       353 Dec  5 10:52 output.list
[2025-12-05 10:52:24] -rw-r--r-- 1 boinc boinc       620 Dec  5 10:52 runtime_log
[2025-12-05 10:52:24] -rw------- 1 boinc boinc   4628480 Dec  5 10:52 result.tar.gz
[2025-12-05 10:52:24] -rw-r--r-- 1 boinc boinc      8918 Dec  5 10:52 runtime_log.err
[2025-12-05 10:52:24] -rw------- 1 boinc boinc       669 Dec  5 10:52 DdNLDmELWj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmMsLKDmNpzHBn.diag
[2025-12-05 10:52:24] -rw-r--r-- 1 boinc boinc      9518 Dec  5 10:52 stderr.txt
[2025-12-05 10:52:24] HITS file was successfully produced:
[2025-12-05 10:52:24] -rw------- 1 boinc boinc 701145540 Dec  5 10:51 shared/HITS.pool.root.1
[2025-12-05 10:52:24]  *** Contents of shared directory: ***
[2025-12-05 10:52:24] total 1060064
[2025-12-05 10:52:24] -rw-r--r-- 2 boinc boinc 379106790 Dec  5 04:11 ATLAS.root_0
[2025-12-05 10:52:24] -rw-r--r-- 2 boinc boinc    590120 Dec  5 04:11 input.tar.gz
[2025-12-05 10:52:24] -rw-r--r-- 2 boinc boinc     15847 Dec  5 04:11 start_atlas.sh
[2025-12-05 10:52:24] -rw------- 1 boinc boinc 701145540 Dec  5 10:51 HITS.pool.root.1
[2025-12-05 10:52:24] -rw------- 1 boinc boinc   4628480 Dec  5 10:52 result.tar.gz
10:52:25 (1952213): run_atlas exited; CPU time 70680.944296
10:52:25 (1952213): called boinc_finish(0)

</stderr_txt>
]]>

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