Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:24:33 (1827652): wrapper (7.7.26015): starting
12:24:33 (1827652): wrapper: running run_atlas (--nthreads 3)
[2025-12-04 12:24:33] Arguments: --nthreads 3
[2025-12-04 12:24:33] Threads: 3
[2025-12-04 12:24:33] Checking for CVMFS
[2025-12-04 12:24:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-04 12:24:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-04 12:24:33] Running cvmfs_config stat atlas.cern.ch
[2025-12-04 12:24:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-04 12:24:33] 2.9.2.0 2923852 22870 100824 153635 2 81 19992743 36864000 0 130560 2 8594680 99.958 991834 736 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-04 12:24:33] CVMFS is ok
[2025-12-04 12:24:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-04 12:24:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-04 12:24:33] Further information can be found at the LHC@home message board.
[2025-12-04 12:24:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-04 12:24:33] Checking for apptainer binary...
[2025-12-04 12:24:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-04 12:24:33] Running /usr/bin/apptainer --version
[2025-12-04 12:24:33] apptainer version 1.4.1-1.1
[2025-12-04 12:24:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-04 12:24:34] magicA161a
[2025-12-04 12:24:34] apptainer works
[2025-12-04 12:24:34] Set ATHENA_PROC_NUMBER=3
[2025-12-04 12:24:34] Set ATHENA_CORE_NUMBER=3
[2025-12-04 12:24:34] Starting ATLAS job with PandaID=6895333833
[2025-12-04 12:24:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-04 20:17:25]  *** The last 200 lines of the pilot log: ***
[2025-12-04 20:17:25] VERSION_ID="7"
[2025-12-04 20:17:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-04 20:17:25] ANSI_COLOR="0;31"
[2025-12-04 20:17:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-04 20:17:25] HOME_URL="https://www.centos.org/"
[2025-12-04 20:17:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-04 20:17:25] 
[2025-12-04 20:17:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-04 20:17:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-04 20:17:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-04 20:17:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-04 20:17:25] 
[2025-12-04 20:17:25] 2025-12-04 19:16:54,597 | INFO     | ***************************************
[2025-12-04 20:17:25] 2025-12-04 19:16:55,100 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-04 20:17:25] 2025-12-04 19:16:55,113 | INFO     | sufficient remaining disk space (384045154304 B)
[2025-12-04 20:17:25] 2025-12-04 19:16:55,113 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-04 20:17:25] 2025-12-04 19:16:55,113 | INFO     | current server update state: UPDATING_FINAL
[2025-12-04 20:17:25] 2025-12-04 19:16:55,113 | INFO     | update_server=False
[2025-12-04 20:17:25] 2025-12-04 19:16:55,113 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-04 20:17:25] 2025-12-04 19:16:55,113 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-04 20:17:25] 2025-12-04 19:16:55,113 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-04 20:17:25] 2025-12-04 19:16:55,140 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-04 20:17:25] 2025-12-04 19:16:55,388 | INFO     | all payload control threads have been joined
[2025-12-04 20:17:25] 2025-12-04 19:16:55,479 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-04 20:17:25] 2025-12-04 19:16:55,479 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-04 20:17:25] 2025-12-04 19:16:55,479 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-04 20:17:25] 2025-12-04 19:16:55,479 | INFO     | will abort loop
[2025-12-04 20:17:25] 2025-12-04 19:16:55,685 | INFO     | all data control threads have been joined
[2025-12-04 20:17:25] 2025-12-04 19:16:56,119 | INFO     | [job] retrieve thread has finished
[2025-12-04 20:17:25] 2025-12-04 19:16:56,119 | INFO     | [job] queue monitor thread has finished
[2025-12-04 20:17:25] 2025-12-04 19:16:56,153 | INFO     | [payload] execute_payloads thread has finished
[2025-12-04 20:17:25] 2025-12-04 19:16:56,203 | INFO     | all job control threads have been joined
[2025-12-04 20:17:25] 2025-12-04 19:16:56,217 | INFO     | [job] create_data_payload thread has finished
[2025-12-04 20:17:25] 2025-12-04 19:16:56,264 | INFO     | [payload] validate_pre thread has finished
[2025-12-04 20:17:25] 2025-12-04 19:16:56,394 | INFO     | [payload] control thread has finished
[2025-12-04 20:17:25] 2025-12-04 19:16:56,485 | INFO     | [job] job monitor thread has finished
[2025-12-04 20:17:25] 2025-12-04 19:16:56,682 | INFO     | [payload] validate_post thread has finished
[2025-12-04 20:17:25] 2025-12-04 19:16:56,690 | INFO     | [data] control thread has finished
[2025-12-04 20:17:25] 2025-12-04 19:16:56,990 | INFO     | [data] copytool_in thread has finished
[2025-12-04 20:17:25] 2025-12-04 19:16:57,119 | INFO     | [data] copytool_out thread has finished
[2025-12-04 20:17:25] 2025-12-04 19:16:57,209 | INFO     | [job] control thread has finished
[2025-12-04 20:17:25] 2025-12-04 19:16:57,534 | INFO     | [payload] failed_post thread has finished
[2025-12-04 20:17:25] 2025-12-04 19:16:57,551 | INFO     | [job] validate thread has finished
[2025-12-04 20:17:25] 2025-12-04 19:16:59,147 | INFO     | [data] queue_monitor thread has finished
[2025-12-04 20:17:25] 2025-12-04 19:17:05,805 | INFO     | job.realtimelogging is not enabled
[2025-12-04 20:17:25] 2025-12-04 19:17:06,811 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-04 20:17:25] 2025-12-04 19:17:12,508 | INFO     | [monitor] cgroup control has ended
[2025-12-04 20:17:25] 2025-12-04 19:17:13,669 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140355516987200)>', '<ExcThread(monitor, started 140355026544384)>']
[2025-12-04 20:17:25] 2025-12-04 19:17:18,695 | INFO     | all workflow threads have been joined
[2025-12-04 20:17:25] 2025-12-04 19:17:18,695 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-04 20:17:25] 2025-12-04 19:17:18,696 | INFO     | traces error code: 0
[2025-12-04 20:17:25] 2025-12-04 19:17:18,696 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-04 20:17:25] 2025-12-04 19:17:25,771 | INFO     | PID=1831371 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-04 20:17:25] 2025-12-04 19:17:25,772 | INFO     | found 0 job(s) in 20 queues
[2025-12-04 20:17:25] 2025-12-04 19:17:25,772 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-04 20:17:25] 2025-12-04 19:17:25,772 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-04 20:17:25] 2025-12-04 19:17:25,772 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-04 20:17:25] 2025-12-04 19:17:25,772 | INFO     | [monitor] control thread has ended
[2025-12-04 20:17:25] 2025-12-04 19:17:25,817 [wrapper] ==== pilot stdout END ====
[2025-12-04 20:17:25] 2025-12-04 19:17:25,819 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-04 20:17:25] 2025-12-04 19:17:25,822 [wrapper] pilotpid: 1831371
[2025-12-04 20:17:25] 2025-12-04 19:17:25,824 [wrapper] Pilot exit status: 0
[2025-12-04 20:17:25] 2025-12-04 19:17:25,831 [wrapper] pandaids: 6895333833
[2025-12-04 20:17:25] 2025-12-04 19:17:25,847 [wrapper] cleanup supervisor_pilot 1886735 1831372
[2025-12-04 20:17:25] 2025-12-04 19:17:25,849 [wrapper] Test setup, not cleaning
[2025-12-04 20:17:25] 2025-12-04 19:17:25,851 [wrapper] apfmon messages muted
[2025-12-04 20:17:25] 2025-12-04 19:17:25,854 [wrapper] ==== wrapper stdout END ====
[2025-12-04 20:17:25] 2025-12-04 19:17:25,856 [wrapper] ==== wrapper stderr END ====
[2025-12-04 20:17:25]  *** Error codes and diagnostics ***
[2025-12-04 20:17:25]     "exeErrorCode": 0,
[2025-12-04 20:17:25]     "exeErrorDiag": "",
[2025-12-04 20:17:25]     "pilotErrorCode": 0,
[2025-12-04 20:17:25]     "pilotErrorDiag": "",
[2025-12-04 20:17:25]  *** Listing of results directory ***
[2025-12-04 20:17:25] total 1296528
[2025-12-04 20:17:25] -rw-r--r-- 1 boinc boinc    576529 Nov 22 02:38 pilot3.tar.gz
[2025-12-04 20:17:25] -rw-r--r-- 1 boinc boinc      5112 Nov 22 03:01 queuedata.json
[2025-12-04 20:17:25] -rwx------ 1 boinc boinc     36292 Nov 22 03:04 runpilot2-wrapper.sh
[2025-12-04 20:17:25] -rw-r--r-- 1 boinc boinc       100 Dec  4 12:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-04 20:17:25] -rwxr-xr-x 1 boinc boinc      7986 Dec  4 12:24 run_atlas
[2025-12-04 20:17:25] -rw-r--r-- 1 boinc boinc       105 Dec  4 12:24 job.xml
[2025-12-04 20:17:25] -rw-r--r-- 2 boinc boinc 408666363 Dec  4 12:24 EVNT.47483658._000212.pool.root.1
[2025-12-04 20:17:25] -rw-r--r-- 2 boinc boinc    590097 Dec  4 12:24 input.tar.gz
[2025-12-04 20:17:25] -rw-r--r-- 2 boinc boinc     15847 Dec  4 12:24 start_atlas.sh
[2025-12-04 20:17:25] drwxrwx--x 2 boinc boinc      4096 Dec  4 12:24 shared
[2025-12-04 20:17:25] -rw-r--r-- 1 boinc boinc         0 Dec  4 12:24 boinc_setup_complete
[2025-12-04 20:17:25] -rw-r--r-- 1 boinc boinc      6449 Dec  4 12:24 init_data.xml
[2025-12-04 20:17:25] -rw-r--r-- 1 boinc boinc         0 Dec  4 12:24 boinc_lockfile
[2025-12-04 20:17:25] -rw-r--r-- 1 boinc boinc      2786 Dec  4 12:24 pandaJob.out
[2025-12-04 20:17:25] -rw------- 1 boinc boinc    985572 Dec  4 12:24 agis_schedconf.cvmfs.json
[2025-12-04 20:17:25] drwx------ 5 boinc boinc      4096 Dec  4 12:24 pilot3
[2025-12-04 20:17:25] -rw-r--r-- 1 boinc boinc       531 Dec  4 20:13 boinc_task_state.xml
[2025-12-04 20:17:25] -rw------- 1 boinc boinc 904777058 Dec  4 20:16 HITS.47556137._002082.pool.root.1
[2025-12-04 20:17:25] -rw------- 1 boinc boinc      1019 Dec  4 20:16 memory_monitor_summary.json
[2025-12-04 20:17:25] -rw------- 1 boinc boinc   1516240 Dec  4 20:16 agis_ddmendpoints.agis.ALL.json
[2025-12-04 20:17:25] -rw------- 1 boinc boinc   1161595 Dec  4 20:16 log.47556137._002082.job.log.tgz.1
[2025-12-04 20:17:25] -rw------- 1 boinc boinc      8564 Dec  4 20:16 heartbeat.json
[2025-12-04 20:17:25] -rw-r--r-- 1 boinc boinc      8192 Dec  4 20:16 boinc_mmap_file
[2025-12-04 20:17:25] -rw-r--r-- 1 boinc boinc        28 Dec  4 20:16 wrapper_checkpoint.txt
[2025-12-04 20:17:25] -rw------- 1 boinc boinc       747 Dec  4 20:17 pilotlog.txt
[2025-12-04 20:17:25] -rw------- 1 boinc boinc        95 Dec  4 20:17 pilot_heartbeat.json
[2025-12-04 20:17:25] -rw------- 1 boinc boinc   3991640 Dec  4 20:17 log.47556137._002082.job.log.1
[2025-12-04 20:17:25] -rw------- 1 boinc boinc       353 Dec  4 20:17 output.list
[2025-12-04 20:17:25] -rw-r--r-- 1 boinc boinc       620 Dec  4 20:17 runtime_log
[2025-12-04 20:17:25] -rw------- 1 boinc boinc   5171200 Dec  4 20:17 result.tar.gz
[2025-12-04 20:17:25] -rw-r--r-- 1 boinc boinc      8918 Dec  4 20:17 runtime_log.err
[2025-12-04 20:17:25] -rw------- 1 boinc boinc       669 Dec  4 20:17 eU0KDm39rg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmfrJKDm0dDvZn.diag
[2025-12-04 20:17:25] -rw-r--r-- 1 boinc boinc      8875 Dec  4 20:17 stderr.txt
[2025-12-04 20:17:25] HITS file was successfully produced:
[2025-12-04 20:17:25] -rw------- 1 boinc boinc 904777058 Dec  4 20:16 shared/HITS.pool.root.1
[2025-12-04 20:17:25]  *** Contents of shared directory: ***
[2025-12-04 20:17:25] total 1288320
[2025-12-04 20:17:25] -rw-r--r-- 2 boinc boinc 408666363 Dec  4 12:24 ATLAS.root_0
[2025-12-04 20:17:25] -rw-r--r-- 2 boinc boinc    590097 Dec  4 12:24 input.tar.gz
[2025-12-04 20:17:25] -rw-r--r-- 2 boinc boinc     15847 Dec  4 12:24 start_atlas.sh
[2025-12-04 20:17:25] -rw------- 1 boinc boinc 904777058 Dec  4 20:16 HITS.pool.root.1
[2025-12-04 20:17:25] -rw------- 1 boinc boinc   5171200 Dec  4 20:17 result.tar.gz
20:17:27 (1827652): run_atlas exited; CPU time 83054.352223
20:17:27 (1827652): called boinc_finish(0)

</stderr_txt>
]]>

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