Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
22:13:34 (72691): wrapper (7.7.26015): starting
22:13:34 (72691): wrapper: running run_atlas (--nthreads 6)
[2025-12-01 22:13:34] Arguments: --nthreads 6
[2025-12-01 22:13:34] Threads: 6
[2025-12-01 22:13:34] Checking for CVMFS
[2025-12-01 22:13:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-01 22:13:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-01 22:13:34] Running cvmfs_config stat atlas.cern.ch
[2025-12-01 22:13:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-01 22:13:34] 2.11.5.0 8833 13 49716 153531 2 110 3641611 4194304 2437 130560 0 194496 99.990 3565 953 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.3.250:3128 1
[2025-12-01 22:13:34] CVMFS is ok
[2025-12-01 22:13:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-01 22:13:34] Checking for apptainer binary...
[2025-12-01 22:13:34] apptainer is not installed, using version from CVMFS
[2025-12-01 22:13:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-01 22:13:34] boinc-b450f
[2025-12-01 22:13:34] apptainer works
[2025-12-01 22:13:34] Set ATHENA_PROC_NUMBER=6
[2025-12-01 22:13:34] Set ATHENA_CORE_NUMBER=6
[2025-12-01 22:13:34] Starting ATLAS job with PandaID=6905334941
[2025-12-01 22:13:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 08:40:09]  *** The last 200 lines of the pilot log: ***
[2025-12-02 08:40:09] 2025-12-02 07:35:38,332 | INFO     | sum of square deviations: 70729549410.0
[2025-12-02 08:40:09] 2025-12-02 07:35:38,338 | INFO     | sum of deviations: 401569675413.00024
[2025-12-02 08:40:09] 2025-12-02 07:35:38,339 | INFO     | mean x: 1764642276.0
[2025-12-02 08:40:09] 2025-12-02 07:35:38,339 | INFO     | mean y: 3013677.5220949263
[2025-12-02 08:40:09] 2025-12-02 07:35:38,339 | INFO     | intersect: -10015809175.224508
[2025-12-02 08:40:09] 2025-12-02 07:35:38,339 | INFO     | chi2: 6.867835549075907
[2025-12-02 08:40:09] 2025-12-02 07:35:38,340 | INFO     | sum of square deviations: 69007312467.5
[2025-12-02 08:40:09] 2025-12-02 07:35:38,346 | INFO     | sum of deviations: 619324082928.4999
[2025-12-02 08:40:09] 2025-12-02 07:35:38,346 | INFO     | mean x: 1764642123.5
[2025-12-02 08:40:09] 2025-12-02 07:35:38,346 | INFO     | mean y: 3032963.331683168
[2025-12-02 08:40:09] 2025-12-02 07:35:38,346 | INFO     | intersect: -15834206971.904867
[2025-12-02 08:40:09] 2025-12-02 07:35:38,346 | INFO     | chi2: 3.6487014128161723
[2025-12-02 08:40:09] 2025-12-02 07:35:38,346 | INFO     | current chi2=3.6487014128161723 (change=46.872615298612985 %)
[2025-12-02 08:40:09] 2025-12-02 07:35:38,347 | INFO     | sum of square deviations: 67313262100.0
[2025-12-02 08:40:09] 2025-12-02 07:35:38,353 | INFO     | sum of deviations: 730470154952.9999
[2025-12-02 08:40:09] 2025-12-02 07:35:38,353 | INFO     | mean x: 1764641971.0
[2025-12-02 08:40:09] 2025-12-02 07:35:38,354 | INFO     | mean y: 3042944.572379368
[2025-12-02 08:40:09] 2025-12-02 07:35:38,354 | INFO     | intersect: -19146501346.981678
[2025-12-02 08:40:09] 2025-12-02 07:35:38,354 | INFO     | chi2: 2.425242318251056
[2025-12-02 08:40:09] 2025-12-02 07:35:38,354 | INFO     | current chi2=2.425242318251056 (change=33.531356944355046 %)
[2025-12-02 08:40:09] 2025-12-02 07:35:38,355 | INFO     | sum of square deviations: 65647165745.0
[2025-12-02 08:40:09] 2025-12-02 07:35:38,361 | INFO     | sum of deviations: 719535247556.0002
[2025-12-02 08:40:09] 2025-12-02 07:35:38,361 | INFO     | mean x: 1764641818.5
[2025-12-02 08:40:09] 2025-12-02 07:35:38,361 | INFO     | mean y: 3041943.66442953
[2025-12-02 08:40:09] 2025-12-02 07:35:38,361 | INFO     | intersect: -19338569736.178368
[2025-12-02 08:40:09] 2025-12-02 07:35:38,362 | INFO     | chi2: 2.4236669181564974
[2025-12-02 08:40:09] 2025-12-02 07:35:38,362 | INFO     | current chi2=2.4236669181564974 (change=0.06495846137530645 %)
[2025-12-02 08:40:09] 2025-12-02 07:35:38,362 | INFO     | right removable region: 595
[2025-12-02 08:40:09] 2025-12-02 07:35:38,363 | INFO     | sum of square deviations: 69007312467.5
[2025-12-02 08:40:09] 2025-12-02 07:35:38,369 | INFO     | sum of deviations: 226381792638.49988
[2025-12-02 08:40:09] 2025-12-02 07:35:38,375 | INFO     | mean x: 1764642428.5
[2025-12-02 08:40:09] 2025-12-02 07:35:38,375 | INFO     | mean y: 3029157.52640264
[2025-12-02 08:40:09] 2025-12-02 07:35:38,375 | INFO     | intersect: -5785964820.726672
[2025-12-02 08:40:09] 2025-12-02 07:35:38,375 | INFO     | chi2: 4.586908745425977
[2025-12-02 08:40:09] 2025-12-02 07:35:38,375 | INFO     | current chi2=4.586908745425977 (change=33.211727149710754 %)
[2025-12-02 08:40:09] 2025-12-02 07:35:38,376 | INFO     | sum of square deviations: 67313262100.0
[2025-12-02 08:40:09] 2025-12-02 07:35:38,382 | INFO     | sum of deviations: 194413201199.00003
[2025-12-02 08:40:09] 2025-12-02 07:35:38,383 | INFO     | mean x: 1764642581.0
[2025-12-02 08:40:09] 2025-12-02 07:35:38,383 | INFO     | mean y: 3032033.204658902
[2025-12-02 08:40:09] 2025-12-02 07:35:38,383 | INFO     | intersect: -5093583439.606838
[2025-12-02 08:40:09] 2025-12-02 07:35:38,383 | INFO     | chi2: 4.550660862144569
[2025-12-02 08:40:09] 2025-12-02 07:35:38,383 | INFO     | current chi2=4.550660862144569 (change=0.7902464446792065 %)
[2025-12-02 08:40:09] 2025-12-02 07:35:38,383 | INFO     | left removable region: 20
[2025-12-02 08:40:09] 2025-12-02 07:35:38,384 | INFO     | sum of square deviations: 58949570400.0
[2025-12-02 08:40:09] 2025-12-02 07:35:38,390 | INFO     | sum of deviations: 463734332979.99994
[2025-12-02 08:40:09] 2025-12-02 07:35:38,390 | INFO     | mean x: 1764642398.0
[2025-12-02 08:40:09] 2025-12-02 07:35:38,390 | INFO     | mean y: 3065625.492173913
[2025-12-02 08:40:09] 2025-12-02 07:35:38,390 | INFO     | intersect: -13878719429.6328
[2025-12-02 08:40:09] 2025-12-02 07:35:38,391 | INFO     | chi2: 0.04712718423492915
[2025-12-02 08:40:09] 2025-12-02 07:35:38,391 | INFO     | current memory leak: 7.87 B/s (using 575 data points, chi2=0.05)
[2025-12-02 08:40:09] 2025-12-02 07:35:38,391 | INFO     | could have reported an average CPU frequency of 3842 MHz (23 samples)
[2025-12-02 08:40:09] 2025-12-02 07:35:38,391 | INFO     | ..............................
[2025-12-02 08:40:09] 2025-12-02 07:35:38,391 | INFO     | . Timing measurements:
[2025-12-02 08:40:09] 2025-12-02 07:35:38,391 | INFO     | . get job = 0 s
[2025-12-02 08:40:09] 2025-12-02 07:35:38,391 | INFO     | . initial setup = 2 s
[2025-12-02 08:40:09] 2025-12-02 07:35:38,392 | INFO     | . payload setup = 12 s
[2025-12-02 08:40:09] 2025-12-02 07:35:38,392 | INFO     | . stage-in = 0 s
[2025-12-02 08:40:09] 2025-12-02 07:35:38,392 | INFO     | . payload execution = 37251 s
[2025-12-02 08:40:09] 2025-12-02 07:35:38,392 | INFO     | . stage-out = 3 s
[2025-12-02 08:40:09] 2025-12-02 07:35:38,392 | INFO     | . log creation = 0 s
[2025-12-02 08:40:09] 2025-12-02 07:35:38,392 | INFO     | ..............................
[2025-12-02 08:40:09] 2025-12-02 07:35:38,645 | INFO     | 
[2025-12-02 08:40:09] 2025-12-02 07:35:38,645 | INFO     | job summary report
[2025-12-02 08:40:09] 2025-12-02 07:35:38,645 | INFO     | --------------------------------------------------
[2025-12-02 08:40:09] 2025-12-02 07:35:38,645 | INFO     | PanDA job id: 6905334941
[2025-12-02 08:40:09] 2025-12-02 07:35:38,645 | INFO     | task id: 47530725
[2025-12-02 08:40:09] 2025-12-02 07:35:38,645 | INFO     | errors: (none)
[2025-12-02 08:40:09] 2025-12-02 07:35:38,645 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 08:40:09] 2025-12-02 07:35:38,645 | INFO     | pilot state: finished 
[2025-12-02 08:40:09] 2025-12-02 07:35:38,645 | INFO     | transexitcode: 0
[2025-12-02 08:40:09] 2025-12-02 07:35:38,645 | INFO     | exeerrorcode: 0
[2025-12-02 08:40:09] 2025-12-02 07:35:38,645 | INFO     | exeerrordiag: 
[2025-12-02 08:40:09] 2025-12-02 07:35:38,646 | INFO     | exitcode: 0
[2025-12-02 08:40:09] 2025-12-02 07:35:38,646 | INFO     | exitmsg: OK
[2025-12-02 08:40:09] 2025-12-02 07:35:38,646 | INFO     | cpuconsumptiontime: 142105 s
[2025-12-02 08:40:09] 2025-12-02 07:35:38,646 | INFO     | nevents: 1000
[2025-12-02 08:40:09] 2025-12-02 07:35:38,646 | INFO     | neventsw: 0
[2025-12-02 08:40:09] 2025-12-02 07:35:38,646 | INFO     | pid: 116417
[2025-12-02 08:40:09] 2025-12-02 07:35:38,646 | INFO     | pgrp: 116417
[2025-12-02 08:40:09] 2025-12-02 07:35:38,646 | INFO     | corecount: 6
[2025-12-02 08:40:09] 2025-12-02 07:35:38,646 | INFO     | event service: False
[2025-12-02 08:40:09] 2025-12-02 07:35:38,646 | INFO     | sizes: {0: 2284405, 4: 2284667, 11: 2284695, 37267: 2346027, 37271: 2355091, 37288: 2355281}
[2025-12-02 08:40:09] 2025-12-02 07:35:38,646 | INFO     | --------------------------------------------------
[2025-12-02 08:40:09] 2025-12-02 07:35:38,646 | INFO     | 
[2025-12-02 08:40:09] 2025-12-02 07:35:38,646 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2025-12-02 08:40:09] 2025-12-02 07:35:38,738 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 08:40:09] 2025-12-02 07:35:38,738 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 08:40:09] 2025-12-02 07:35:38,739 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 08:40:09] 2025-12-02 07:35:38,739 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 08:40:09] 2025-12-02 07:35:38,739 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 08:40:09] 2025-12-02 07:35:38,739 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 08:40:09] 2025-12-02 07:35:38,739 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 08:40:09] 2025-12-02 07:35:38,739 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 08:40:09] 2025-12-02 07:35:38,739 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 08:40:09] 2025-12-02 07:35:38,739 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 08:40:09] 2025-12-02 07:35:38,739 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 08:40:09] 2025-12-02 07:35:38,739 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 08:40:09] 2025-12-02 07:35:38,739 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 08:40:09] 2025-12-02 07:35:38,739 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 08:40:09] 2025-12-02 07:35:38,739 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 08:40:09] 2025-12-02 07:35:38,740 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 08:40:09] 2025-12-02 07:35:38,740 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 08:40:09] 2025-12-02 07:35:38,740 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 08:40:09] 2025-12-02 07:35:38,740 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 08:40:09] 2025-12-02 07:35:38,740 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 08:40:09] 2025-12-02 07:35:38,740 | INFO     | job 6905334941 has completed (purged errors)
[2025-12-02 08:40:09] 2025-12-02 07:35:38,740 | INFO     | overall cleanup function is called
[2025-12-02 08:40:09] 2025-12-02 07:35:39,765 | INFO     | --- collectZombieJob: --- 10, [116417]
[2025-12-02 08:40:09] 2025-12-02 07:35:39,765 | INFO     | zombie collector waiting for pid 116417
[2025-12-02 08:40:09] 2025-12-02 07:35:39,765 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 08:40:09] 2025-12-02 07:35:39,765 | INFO     | collected zombie processes
[2025-12-02 08:40:09] 2025-12-02 07:35:39,765 | INFO     | will attempt to kill all subprocesses of pid=116417
[2025-12-02 08:40:09] 2025-12-02 07:35:39,896 | INFO     | process IDs to be killed: [116417] (in reverse order)
[2025-12-02 08:40:09] 2025-12-02 07:35:39,970 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 08:40:09] 2025-12-02 07:35:39,970 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 08:40:09] 2025-12-02 07:35:39,972 | INFO     | did not find any defunct processes belonging to 116417
[2025-12-02 08:40:09] 2025-12-02 07:35:39,975 | INFO     | did not find any defunct processes belonging to 116417
[2025-12-02 08:40:09] 2025-12-02 07:35:39,975 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 08:40:09] 2025-12-02 07:35:39,975 | INFO     | ready for new job
[2025-12-02 08:40:09] 2025-12-02 07:35:39,975 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 08:40:09] 2025-12-02 07:35:39,976 | INFO     | ***************************************
[2025-12-02 08:40:09] 2025-12-02 07:35:39,976 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 08:40:09] 2025-12-02 07:35:39,976 | INFO     | ***************************************
[2025-12-02 08:40:09] 2025-12-02 07:35:39,976 | INFO     | 
[2025-12-02 08:40:09] 2025-12-02 07:35:39,977 | INFO     | architecture information:
[2025-12-02 08:40:09] 2025-12-02 07:35:39,977 | INFO     | executing command: cat /etc/os-release
[2025-12-02 08:40:09] 2025-12-02 07:35:39,986 | INFO     | cat /etc/os-release:
[2025-12-02 08:40:09] NAME="CentOS Linux"
[2025-12-02 08:40:09] VERSION="7 (Core)"
[2025-12-02 08:40:09] ID="centos"
[2025-12-02 08:40:09] ID_LIKE="rhel fedora"
[2025-12-02 08:40:09] VERSION_ID="7"
[2025-12-02 08:40:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 08:40:09] ANSI_COLOR="0;31"
[2025-12-02 08:40:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 08:40:09] HOME_URL="https://www.centos.org/"
[2025-12-02 08:40:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 08:40:09] 
[2025-12-02 08:40:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 08:40:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 08:40:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 08:40:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 08:40:09] 
[2025-12-02 08:40:09] 2025-12-02 07:35:39,986 | INFO     | ***************************************
[2025-12-02 08:40:09] 2025-12-02 07:35:40,488 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2025-12-02 08:40:09] 2025-12-02 07:35:40,552 | INFO     | sufficient remaining disk space (14630780928 B)
[2025-12-02 08:40:09] 2025-12-02 07:35:40,552 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 08:40:09] 2025-12-02 07:35:40,552 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 08:40:09] 2025-12-02 07:35:40,552 | INFO     | update_server=False
[2025-12-02 08:40:09] 2025-12-02 07:35:40,552 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 08:40:09] 2025-12-02 07:35:40,839 | INFO     | all job control threads have been joined
[2025-12-02 08:40:09] 2025-12-02 07:35:40,864 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 08:40:09] 2025-12-02 07:35:40,883 | INFO     | all data control threads have been joined
[2025-12-02 08:40:09] 2025-12-02 07:35:40,994 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-02 08:40:09] 2025-12-02 07:35:40,994 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-02 08:40:09] 2025-12-02 07:35:40,994 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 08:40:09] 2025-12-02 07:35:40,994 | INFO     | will abort loop
[2025-12-02 08:40:09] 2025-12-02 07:35:41,167 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 08:40:09] 2025-12-02 07:35:41,183 | INFO     | all payload control threads have been joined
[2025-12-02 08:40:09] 2025-12-02 07:35:41,555 | INFO     | [job] retrieve thread has finished
[2025-12-02 08:40:09] 2025-12-02 07:35:41,843 | INFO     | [job] control thread has finished
[2025-12-02 08:40:09] 2025-12-02 07:35:41,885 | INFO     | [data] control thread has finished
[2025-12-02 08:40:09] 2025-12-02 07:35:41,936 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 08:40:09] 2025-12-02 07:35:41,995 | INFO     | [job] job monitor thread has finished
[2025-12-02 08:40:09] 2025-12-02 07:35:42,005 | INFO     | [data] copytool_in thread has finished
[2025-12-02 08:40:09] 2025-12-02 07:35:42,185 | INFO     | [payload] control thread has finished
[2025-12-02 08:40:09] 2025-12-02 07:35:42,370 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 08:40:09] 2025-12-02 07:35:42,385 | INFO     | [job] validate thread has finished
[2025-12-02 08:40:09] 2025-12-02 07:35:42,510 | INFO     | [payload] validate_post thread has finished
[2025-12-02 08:40:09] 2025-12-02 07:35:42,905 | INFO     | [payload] failed_post thread has finished
[2025-12-02 08:40:09] 2025-12-02 07:35:43,028 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 08:40:09] 2025-12-02 07:35:43,173 | INFO     | [data] copytool_out thread has finished
[2025-12-02 08:40:09] 2025-12-02 07:35:43,475 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 08:40:09] 2025-12-02 07:35:44,480 | INFO     | [job] queue monitor thread has finished
[2025-12-02 08:40:09] 2025-12-02 07:35:44,865 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 08:40:09] 2025-12-02 07:35:51,395 | INFO     | job.realtimelogging is not enabled
[2025-12-02 08:40:09] 2025-12-02 07:35:52,400 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 08:40:09] 2025-12-02 07:35:57,465 | INFO     | [monitor] cgroup control has ended
[2025-12-02 08:40:09] 2025-12-02 07:35:58,173 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139737865033536)>', '<ExcThread(monitor, started 139737029408512)>']
[2025-12-02 08:40:09] 2025-12-02 07:36:03,195 | INFO     | all workflow threads have been joined
[2025-12-02 08:40:09] 2025-12-02 07:36:03,195 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 08:40:09] 2025-12-02 07:36:03,195 | INFO     | traces error code: 0
[2025-12-02 08:40:09] 2025-12-02 07:36:03,195 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 08:40:09] 2025-12-02 07:36:10,634 | INFO     | PID=82878 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-02 08:40:09] 2025-12-02 07:36:10,634 | INFO     | .. there are 3 such processes running
[2025-12-02 08:40:09] 2025-12-02 07:36:10,634 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 08:40:09] 2025-12-02 07:36:10,634 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 08:40:09] 2025-12-02 07:36:10,634 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 08:40:09] 2025-12-02 07:36:10,634 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 08:40:09] 2025-12-02 07:36:10,634 | INFO     | [monitor] control thread has ended
[2025-12-02 08:40:09] 2025-12-02 07:36:10,766 [wrapper] ==== pilot stdout END ====
[2025-12-02 08:40:09] 2025-12-02 07:36:10,776 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 08:40:09] 2025-12-02 07:36:10,794 [wrapper] pilotpid: 82878
[2025-12-02 08:40:09] 2025-12-02 07:36:10,816 [wrapper] Pilot exit status: 0
[2025-12-02 08:40:09] 2025-12-02 07:36:10,886 [wrapper] pandaids: 6905334941
[2025-12-02 08:40:09] 2025-12-02 07:36:10,946 [wrapper] cleanup supervisor_pilot  369126 82879
[2025-12-02 08:40:09] 2025-12-02 07:36:10,956 [wrapper] Test setup, not cleaning
[2025-12-02 08:40:09] 2025-12-02 07:36:10,975 [wrapper] apfmon messages muted
[2025-12-02 08:40:09] 2025-12-02 07:36:10,986 [wrapper] ==== wrapper stdout END ====
[2025-12-02 08:40:09] 2025-12-02 07:36:11,005 [wrapper] ==== wrapper stderr END ====
[2025-12-02 08:40:09]  *** Error codes and diagnostics ***
[2025-12-02 08:40:09]     "exeErrorCode": 0,
[2025-12-02 08:40:09]     "exeErrorDiag": "",
[2025-12-02 08:40:09]     "pilotErrorCode": 0,
[2025-12-02 08:40:09]     "pilotErrorDiag": "",
[2025-12-02 08:40:09]  *** Listing of results directory ***
[2025-12-02 08:40:09] total 1051171
[2025-12-02 08:40:09] -rw-r--r-- 1 boinc boinc    576529 Nov 30 01:16 pilot3.tar.gz
[2025-12-02 08:40:09] -rwx------ 1 boinc boinc     36292 Nov 30 01:18 runpilot2-wrapper.sh
[2025-12-02 08:40:09] -rw-r--r-- 1 boinc boinc      5112 Nov 30 01:21 queuedata.json
[2025-12-02 08:40:09] -rw-r--r-- 1 boinc boinc       100 Dec  1 22:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 08:40:09] -rwxr-xr-x 1 boinc boinc      7986 Dec  1 22:13 run_atlas
[2025-12-02 08:40:09] -rw-r--r-- 1 boinc boinc       105 Dec  1 22:13 job.xml
[2025-12-02 08:40:09] -rw-r--r-- 2 boinc boinc     15847 Dec  1 22:13 start_atlas.sh
[2025-12-02 08:40:09] drwxrwx--x 2 boinc boinc         5 Dec  1 22:13 shared
[2025-12-02 08:40:09] -rw-r--r-- 2 boinc boinc    590135 Dec  1 22:13 input.tar.gz
[2025-12-02 08:40:09] -rw-r--r-- 1 boinc boinc      6795 Dec  1 22:13 init_data.xml
[2025-12-02 08:40:09] -rw-r--r-- 2 boinc boinc 375893015 Dec  1 22:13 EVNT.47530720._000098.pool.root.1
[2025-12-02 08:40:09] -rw-r--r-- 1 boinc boinc         0 Dec  1 22:13 boinc_lockfile
[2025-12-02 08:40:09] -rw-r--r-- 1 boinc boinc      2877 Dec  1 22:13 pandaJob.out
[2025-12-02 08:40:09] -rw------- 1 boinc boinc        56 Dec  1 22:13 setup.sh.local
[2025-12-02 08:40:09] -rw------- 1 boinc boinc    992004 Dec  1 22:13 agis_schedconf.cvmfs.json
[2025-12-02 08:40:09] drwx------ 5 boinc boinc        22 Dec  1 22:13 pilot3
[2025-12-02 08:40:09] -rw-r--r-- 1 boinc boinc       533 Dec  2 08:25 boinc_task_state.xml
[2025-12-02 08:40:09] -rw------- 1 boinc boinc 694404086 Dec  2 08:34 HITS.47530725._002355.pool.root.1
[2025-12-02 08:40:09] -rw------- 1 boinc boinc      1040 Dec  2 08:35 memory_monitor_summary.json
[2025-12-02 08:40:09] -rw------- 1 boinc boinc        95 Dec  2 08:35 pilot_heartbeat.json
[2025-12-02 08:40:09] -rw------- 1 boinc boinc   1516240 Dec  2 08:35 agis_ddmendpoints.agis.ALL.json
[2025-12-02 08:40:09] -rw------- 1 boinc boinc   1685714 Dec  2 08:35 log.47530725._002355.job.log.tgz.1
[2025-12-02 08:40:09] -rw------- 1 boinc boinc     28039 Dec  2 08:35 heartbeat.json
[2025-12-02 08:40:09] -rw------- 1 boinc boinc       820 Dec  2 08:36 pilotlog.txt
[2025-12-02 08:40:09] -rw------- 1 boinc boinc   5197242 Dec  2 08:36 log.47530725._002355.job.log.1
[2025-12-02 08:40:09] -rw------- 1 boinc boinc       353 Dec  2 08:36 output.list
[2025-12-02 08:40:09] -rw-r--r-- 1 boinc boinc       620 Dec  2 08:36 runtime_log
[2025-12-02 08:40:09] -rw------- 1 boinc boinc   6922240 Dec  2 08:36 result.tar.gz
[2025-12-02 08:40:09] -rw-r--r-- 1 boinc boinc      9465 Dec  2 08:36 runtime_log.err
[2025-12-02 08:40:09] -rw------- 1 boinc boinc       668 Dec  2 08:36 lGyMDm9Jkj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmd1LKDm6w6vNm.diag
[2025-12-02 08:40:09] -rw-r--r-- 1 boinc boinc      8192 Dec  2 08:40 boinc_mmap_file
[2025-12-02 08:40:09] -rw-r--r-- 1 boinc boinc        29 Dec  2 08:40 wrapper_checkpoint.txt
[2025-12-02 08:40:09] -rw-r--r-- 1 boinc boinc     20760 Dec  2 08:40 stderr.txt
[2025-12-02 08:40:09] HITS file was successfully produced:
[2025-12-02 08:40:09] -rw------- 1 boinc boinc 694404086 Dec  2 08:34 shared/HITS.pool.root.1
[2025-12-02 08:40:09]  *** Contents of shared directory: ***
[2025-12-02 08:40:09] total 1048419
[2025-12-02 08:40:09] -rw-r--r-- 2 boinc boinc     15847 Dec  1 22:13 start_atlas.sh
[2025-12-02 08:40:09] -rw-r--r-- 2 boinc boinc    590135 Dec  1 22:13 input.tar.gz
[2025-12-02 08:40:09] -rw-r--r-- 2 boinc boinc 375893015 Dec  1 22:13 ATLAS.root_0
[2025-12-02 08:40:09] -rw------- 1 boinc boinc 694404086 Dec  2 08:34 HITS.pool.root.1
[2025-12-02 08:40:09] -rw------- 1 boinc boinc   6922240 Dec  2 08:36 result.tar.gz
08:40:11 (72691): run_atlas exited; CPU time 142503.127744
08:40:11 (72691): called boinc_finish(0)

</stderr_txt>
]]>

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