Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:03:00 (1572316): wrapper (7.7.26015): starting
06:03:00 (1572316): wrapper: running run_atlas (--nthreads 3)
[2025-12-03 06:03:00] Arguments: --nthreads 3
[2025-12-03 06:03:00] Threads: 3
[2025-12-03 06:03:00] Checking for CVMFS
[2025-12-03 06:03:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-03 06:03:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-03 06:03:00] Running cvmfs_config stat atlas.cern.ch
[2025-12-03 06:03:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-03 06:03:00] 2.9.2.0 2923852 21048 98312 153581 2 81 19619529 36864000 0 130560 1 7904121 99.956 924560 831 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-03 06:03:00] CVMFS is ok
[2025-12-03 06:03:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-03 06:03:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-03 06:03:00] Further information can be found at the LHC@home message board.
[2025-12-03 06:03:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-03 06:03:00] Checking for apptainer binary...
[2025-12-03 06:03:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-03 06:03:00] Running /usr/bin/apptainer --version
[2025-12-03 06:03:00] apptainer version 1.4.1-1.1
[2025-12-03 06:03:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-03 06:03:00] magicA161a
[2025-12-03 06:03:00] apptainer works
[2025-12-03 06:03:00] Set ATHENA_PROC_NUMBER=3
[2025-12-03 06:03:00] Set ATHENA_CORE_NUMBER=3
[2025-12-03 06:03:00] Starting ATLAS job with PandaID=6896209711
[2025-12-03 06:03:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 12:44:38]  *** The last 200 lines of the pilot log: ***
[2025-12-03 12:44:38] 2025-12-03 11:43:58,836 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 12:44:38] 2025-12-03 11:43:58,837 | INFO     | aborting loop
[2025-12-03 12:44:38] 2025-12-03 11:43:59,037 | INFO     | all payload control threads have been joined
[2025-12-03 12:44:38] 2025-12-03 11:43:59,077 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 12:44:38] 2025-12-03 11:43:59,339 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 12:44:38] 2025-12-03 11:43:59,735 | INFO     | all job control threads have been joined
[2025-12-03 12:44:38] 2025-12-03 11:43:59,780 | INFO     | [job] queue monitor thread has finished
[2025-12-03 12:44:38] 2025-12-03 11:43:59,781 | INFO     | [job] retrieve thread has finished
[2025-12-03 12:44:38] 2025-12-03 11:43:59,831 | INFO     | all data control threads have been joined
[2025-12-03 12:44:38] 2025-12-03 11:43:59,842 | INFO     | [job] job monitor thread has finished
[2025-12-03 12:44:38] 2025-12-03 11:43:59,979 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 12:44:38] 2025-12-03 11:44:00,013 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 12:44:38] 2025-12-03 11:44:00,043 | INFO     | [payload] control thread has finished
[2025-12-03 12:44:38] 2025-12-03 11:44:00,204 | INFO     | [payload] failed_post thread has finished
[2025-12-03 12:44:38] 2025-12-03 11:44:00,661 | INFO     | [data] copytool_in thread has finished
[2025-12-03 12:44:38] 2025-12-03 11:44:00,741 | INFO     | [job] control thread has finished
[2025-12-03 12:44:38] 2025-12-03 11:44:00,751 | INFO     | [payload] validate_post thread has finished
[2025-12-03 12:44:38] 2025-12-03 11:44:00,837 | INFO     | [data] control thread has finished
[2025-12-03 12:44:38] 2025-12-03 11:44:01,083 | INFO     | [data] copytool_out thread has finished
[2025-12-03 12:44:38] 2025-12-03 11:44:01,242 | INFO     | [job] validate thread has finished
[2025-12-03 12:44:38] 2025-12-03 11:44:01,255 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 12:44:38] 2025-12-03 11:44:03,346 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 12:44:38] 2025-12-03 11:44:08,863 | INFO     | job.realtimelogging is not enabled
[2025-12-03 12:44:38] 2025-12-03 11:44:09,869 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 12:44:38] 2025-12-03 11:44:28,943 | INFO     | PID=1576035 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-03 12:44:38] 2025-12-03 11:44:28,943 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 12:44:38] 2025-12-03 11:44:28,943 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 12:44:38] 2025-12-03 11:44:28,943 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 12:44:38] 2025-12-03 11:44:33,416 | INFO     | [monitor] cgroup control has ended
[2025-12-03 12:44:38] 2025-12-03 11:44:33,419 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140639838402368)>', '<ExcThread(monitor, started 140639358408448)>']
[2025-12-03 12:44:38] 2025-12-03 11:44:33,970 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 12:44:38] 2025-12-03 11:44:33,971 | INFO     | [monitor] control thread has ended
[2025-12-03 12:44:38] 2025-12-03 11:44:38,423 | INFO     | all workflow threads have been joined
[2025-12-03 12:44:38] 2025-12-03 11:44:38,423 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 12:44:38] 2025-12-03 11:44:38,423 | INFO     | traces error code: 0
[2025-12-03 12:44:38] 2025-12-03 11:44:38,423 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 12:44:38] 2025-12-03 11:44:38,473 [wrapper] ==== pilot stdout END ====
[2025-12-03 12:44:38] 2025-12-03 11:44:38,475 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 12:44:38] 2025-12-03 11:44:38,478 [wrapper] pilotpid: 1576035
[2025-12-03 12:44:38] 2025-12-03 11:44:38,480 [wrapper] Pilot exit status: 0
[2025-12-03 12:44:38] 2025-12-03 11:44:38,487 [wrapper] pandaids: 6896209711
[2025-12-03 12:44:38] 2025-12-03 11:44:38,503 [wrapper] cleanup supervisor_pilot 1629629 1576036
[2025-12-03 12:44:38] 2025-12-03 11:44:38,505 [wrapper] Test setup, not cleaning
[2025-12-03 12:44:38] 2025-12-03 11:44:38,508 [wrapper] apfmon messages muted
[2025-12-03 12:44:38] 2025-12-03 11:44:38,510 [wrapper] ==== wrapper stdout END ====
[2025-12-03 12:44:38] 2025-12-03 11:44:38,513 [wrapper] ==== wrapper stderr END ====
[2025-12-03 12:44:38]  *** Error codes and diagnostics ***
[2025-12-03 12:44:38]     "exeErrorCode": 0,
[2025-12-03 12:44:38]     "exeErrorDiag": "",
[2025-12-03 12:44:38]     "pilotErrorCode": 0,
[2025-12-03 12:44:38]     "pilotErrorDiag": "",
[2025-12-03 12:44:38]  *** Listing of results directory ***
[2025-12-03 12:44:38] total 1062908
[2025-12-03 12:44:38] -rw-r--r-- 1 boinc boinc    576529 Nov 28 11:28 pilot3.tar.gz
[2025-12-03 12:44:38] -rwx------ 1 boinc boinc     36292 Nov 28 11:31 runpilot2-wrapper.sh
[2025-12-03 12:44:38] -rw-r--r-- 1 boinc boinc      5112 Nov 28 11:33 queuedata.json
[2025-12-03 12:44:38] -rw-r--r-- 1 boinc boinc       100 Dec  3 06:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 12:44:38] -rwxr-xr-x 1 boinc boinc      7986 Dec  3 06:03 run_atlas
[2025-12-03 12:44:38] -rw-r--r-- 1 boinc boinc       105 Dec  3 06:03 job.xml
[2025-12-03 12:44:38] -rw-r--r-- 2 boinc boinc 378275417 Dec  3 06:03 EVNT.47531050._000057.pool.root.1
[2025-12-03 12:44:38] -rw-r--r-- 2 boinc boinc    590122 Dec  3 06:03 input.tar.gz
[2025-12-03 12:44:38] -rw-r--r-- 2 boinc boinc     15847 Dec  3 06:03 start_atlas.sh
[2025-12-03 12:44:38] drwxrwx--x 2 boinc boinc      4096 Dec  3 06:03 shared
[2025-12-03 12:44:38] -rw-r--r-- 1 boinc boinc         0 Dec  3 06:03 boinc_setup_complete
[2025-12-03 12:44:38] -rw-r--r-- 1 boinc boinc      6449 Dec  3 06:03 init_data.xml
[2025-12-03 12:44:38] -rw-r--r-- 1 boinc boinc         0 Dec  3 06:03 boinc_lockfile
[2025-12-03 12:44:38] -rw-r--r-- 1 boinc boinc      2877 Dec  3 06:03 pandaJob.out
[2025-12-03 12:44:38] -rw------- 1 boinc boinc    989297 Dec  3 06:03 agis_schedconf.cvmfs.json
[2025-12-03 12:44:38] drwx------ 5 boinc boinc      4096 Dec  3 06:03 pilot3
[2025-12-03 12:44:38] -rw-r--r-- 1 boinc boinc       531 Dec  3 12:40 boinc_task_state.xml
[2025-12-03 12:44:38] -rw------- 1 boinc boinc 697010165 Dec  3 12:43 HITS.47531058._000054.pool.root.1
[2025-12-03 12:44:38] -rw------- 1 boinc boinc      1023 Dec  3 12:43 memory_monitor_summary.json
[2025-12-03 12:44:38] -rw------- 1 boinc boinc   1516240 Dec  3 12:43 agis_ddmendpoints.agis.ALL.json
[2025-12-03 12:44:38] -rw------- 1 boinc boinc   1203448 Dec  3 12:43 log.47531058._000054.job.log.tgz.1
[2025-12-03 12:44:38] -rw------- 1 boinc boinc     27235 Dec  3 12:43 heartbeat.json
[2025-12-03 12:44:38] -rw-r--r-- 1 boinc boinc      8192 Dec  3 12:44 boinc_mmap_file
[2025-12-03 12:44:38] -rw-r--r-- 1 boinc boinc        28 Dec  3 12:44 wrapper_checkpoint.txt
[2025-12-03 12:44:38] -rw------- 1 boinc boinc        95 Dec  3 12:44 pilot_heartbeat.json
[2025-12-03 12:44:38] -rw------- 1 boinc boinc      4824 Dec  3 12:44 pilotlog.txt
[2025-12-03 12:44:38] -rw------- 1 boinc boinc   3395349 Dec  3 12:44 log.47531058._000054.job.log.1
[2025-12-03 12:44:38] -rw------- 1 boinc boinc       353 Dec  3 12:44 output.list
[2025-12-03 12:44:38] -rw-r--r-- 1 boinc boinc       620 Dec  3 12:44 runtime_log
[2025-12-03 12:44:38] -rw------- 1 boinc boinc   4638720 Dec  3 12:44 result.tar.gz
[2025-12-03 12:44:38] -rw-r--r-- 1 boinc boinc      8918 Dec  3 12:44 runtime_log.err
[2025-12-03 12:44:38] -rw------- 1 boinc boinc       669 Dec  3 12:44 eRDNDmAwAj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmpMLKDmQcGcsn.diag
[2025-12-03 12:44:38] -rw-r--r-- 1 boinc boinc      7164 Dec  3 12:44 stderr.txt
[2025-12-03 12:44:38] HITS file was successfully produced:
[2025-12-03 12:44:38] -rw------- 1 boinc boinc 697010165 Dec  3 12:43 shared/HITS.pool.root.1
[2025-12-03 12:44:38]  *** Contents of shared directory: ***
[2025-12-03 12:44:38] total 1055224
[2025-12-03 12:44:38] -rw-r--r-- 2 boinc boinc 378275417 Dec  3 06:03 ATLAS.root_0
[2025-12-03 12:44:38] -rw-r--r-- 2 boinc boinc    590122 Dec  3 06:03 input.tar.gz
[2025-12-03 12:44:38] -rw-r--r-- 2 boinc boinc     15847 Dec  3 06:03 start_atlas.sh
[2025-12-03 12:44:38] -rw------- 1 boinc boinc 697010165 Dec  3 12:43 HITS.pool.root.1
[2025-12-03 12:44:38] -rw------- 1 boinc boinc   4638720 Dec  3 12:44 result.tar.gz
12:44:39 (1572316): run_atlas exited; CPU time 70762.410057
12:44:39 (1572316): called boinc_finish(0)

</stderr_txt>
]]>

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