Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:16:24 (1259793): wrapper (7.7.26015): starting
16:16:24 (1259793): wrapper: running run_atlas (--nthreads 3)
[2025-12-01 16:16:24] Arguments: --nthreads 3
[2025-12-01 16:16:24] Threads: 3
[2025-12-01 16:16:24] Checking for CVMFS
[2025-12-01 16:16:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-01 16:16:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-01 16:16:24] Running cvmfs_config stat atlas.cern.ch
[2025-12-01 16:16:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-01 16:16:25] 2.9.2.0 2923852 18782 98680 153522 1 80 19264522 36864001 0 130560 1 7039047 99.953 848470 770 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-01 16:16:25] CVMFS is ok
[2025-12-01 16:16:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-01 16:16:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-01 16:16:25] Further information can be found at the LHC@home message board.
[2025-12-01 16:16:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-01 16:16:25] Checking for apptainer binary...
[2025-12-01 16:16:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-01 16:16:25] Running /usr/bin/apptainer --version
[2025-12-01 16:16:25] apptainer version 1.4.1-1.1
[2025-12-01 16:16:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-01 16:16:25] magicA161a
[2025-12-01 16:16:25] apptainer works
[2025-12-01 16:16:25] Set ATHENA_PROC_NUMBER=3
[2025-12-01 16:16:25] Set ATHENA_CORE_NUMBER=3
[2025-12-01 16:16:25] Starting ATLAS job with PandaID=6899577165
[2025-12-01 16:16:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-01 23:55:14]  *** The last 200 lines of the pilot log: ***
[2025-12-01 23:55:14] 2025-12-01 22:54:55,380 | INFO     | architecture information:
[2025-12-01 23:55:14] 2025-12-01 22:54:55,380 | INFO     | executing command: cat /etc/os-release
[2025-12-01 23:55:14] 2025-12-01 22:54:55,388 | INFO     | cat /etc/os-release:
[2025-12-01 23:55:14] NAME="CentOS Linux"
[2025-12-01 23:55:14] VERSION="7 (Core)"
[2025-12-01 23:55:14] ID="centos"
[2025-12-01 23:55:14] ID_LIKE="rhel fedora"
[2025-12-01 23:55:14] VERSION_ID="7"
[2025-12-01 23:55:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-01 23:55:14] ANSI_COLOR="0;31"
[2025-12-01 23:55:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-01 23:55:14] HOME_URL="https://www.centos.org/"
[2025-12-01 23:55:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-01 23:55:14] 
[2025-12-01 23:55:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-01 23:55:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-01 23:55:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-01 23:55:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-01 23:55:14] 
[2025-12-01 23:55:14] 2025-12-01 22:54:55,389 | INFO     | ***************************************
[2025-12-01 23:55:14] 2025-12-01 22:54:55,892 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-01 23:55:14] 2025-12-01 22:54:55,904 | INFO     | sufficient remaining disk space (382627479552 B)
[2025-12-01 23:55:14] 2025-12-01 22:54:55,905 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-01 23:55:14] 2025-12-01 22:54:55,905 | INFO     | current server update state: UPDATING_FINAL
[2025-12-01 23:55:14] 2025-12-01 22:54:55,905 | INFO     | update_server=False
[2025-12-01 23:55:14] 2025-12-01 22:54:55,905 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-01 23:55:14] 2025-12-01 22:54:55,905 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-01 23:55:14] 2025-12-01 22:54:55,905 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-01 23:55:14] 2025-12-01 22:54:55,905 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-01 23:55:14] 2025-12-01 22:54:55,905 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-01 23:55:14] 2025-12-01 22:54:55,905 | INFO     | found 0 job(s) in 20 queues
[2025-12-01 23:55:14] 2025-12-01 22:54:55,906 | INFO     | aborting loop
[2025-12-01 23:55:14] 2025-12-01 22:54:55,906 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-01 23:55:14] 2025-12-01 22:54:55,906 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-01 23:55:14] 2025-12-01 22:54:55,941 | INFO     | all data control threads have been joined
[2025-12-01 23:55:14] 2025-12-01 22:54:56,333 | INFO     | all payload control threads have been joined
[2025-12-01 23:55:14] 2025-12-01 22:54:56,910 | INFO     | [job] retrieve thread has finished
[2025-12-01 23:55:14] 2025-12-01 22:54:56,911 | INFO     | [job] queue monitor thread has finished
[2025-12-01 23:55:14] 2025-12-01 22:54:56,911 | INFO     | [job] job monitor thread has finished
[2025-12-01 23:55:14] 2025-12-01 22:54:56,946 | INFO     | [data] control thread has finished
[2025-12-01 23:55:14] 2025-12-01 22:54:57,087 | INFO     | [data] copytool_in thread has finished
[2025-12-01 23:55:14] 2025-12-01 22:54:57,194 | INFO     | [payload] execute_payloads thread has finished
[2025-12-01 23:55:14] 2025-12-01 22:54:57,324 | INFO     | all job control threads have been joined
[2025-12-01 23:55:14] 2025-12-01 22:54:57,339 | INFO     | [payload] control thread has finished
[2025-12-01 23:55:14] 2025-12-01 22:54:57,692 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-01 23:55:14] 2025-12-01 22:54:57,710 | INFO     | [job] create_data_payload thread has finished
[2025-12-01 23:55:14] 2025-12-01 22:54:57,713 | INFO     | [payload] validate_pre thread has finished
[2025-12-01 23:55:14] 2025-12-01 22:54:57,718 | INFO     | [payload] validate_post thread has finished
[2025-12-01 23:55:14] 2025-12-01 22:54:57,729 | INFO     | [job] validate thread has finished
[2025-12-01 23:55:14] 2025-12-01 22:54:57,911 | INFO     | [data] copytool_out thread has finished
[2025-12-01 23:55:14] 2025-12-01 22:54:58,216 | INFO     | [payload] failed_post thread has finished
[2025-12-01 23:55:14] 2025-12-01 22:54:58,330 | INFO     | [job] control thread has finished
[2025-12-01 23:55:14] 2025-12-01 22:55:01,699 | INFO     | [data] queue_monitor thread has finished
[2025-12-01 23:55:14] 2025-12-01 22:55:03,372 | INFO     | [monitor] cgroup control has ended
[2025-12-01 23:55:14] 2025-12-01 22:55:06,888 | INFO     | job.realtimelogging is not enabled
[2025-12-01 23:55:14] 2025-12-01 22:55:07,893 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-01 23:55:14] 2025-12-01 22:55:09,061 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140505567749952)>', '<ExcThread(monitor, started 140504956139264)>']
[2025-12-01 23:55:14] 2025-12-01 22:55:09,979 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-01 23:55:14] 2025-12-01 22:55:09,980 | INFO     | [monitor] control thread has ended
[2025-12-01 23:55:14] 2025-12-01 22:55:14,087 | INFO     | all workflow threads have been joined
[2025-12-01 23:55:14] 2025-12-01 22:55:14,087 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-01 23:55:14] 2025-12-01 22:55:14,087 | INFO     | traces error code: 0
[2025-12-01 23:55:14] 2025-12-01 22:55:14,087 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-01 23:55:14] 2025-12-01 22:55:14,138 [wrapper] ==== pilot stdout END ====
[2025-12-01 23:55:14] 2025-12-01 22:55:14,140 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-01 23:55:14] 2025-12-01 22:55:14,143 [wrapper] pilotpid: 1263525
[2025-12-01 23:55:14] 2025-12-01 22:55:14,145 [wrapper] Pilot exit status: 0
[2025-12-01 23:55:14] 2025-12-01 22:55:14,152 [wrapper] pandaids: 6899577165
[2025-12-01 23:55:14] 2025-12-01 22:55:14,168 [wrapper] cleanup supervisor_pilot 1318048 1263526
[2025-12-01 23:55:14] 2025-12-01 22:55:14,170 [wrapper] Test setup, not cleaning
[2025-12-01 23:55:14] 2025-12-01 22:55:14,172 [wrapper] apfmon messages muted
[2025-12-01 23:55:14] 2025-12-01 22:55:14,175 [wrapper] ==== wrapper stdout END ====
[2025-12-01 23:55:14] 2025-12-01 22:55:14,177 [wrapper] ==== wrapper stderr END ====
[2025-12-01 23:55:14]  *** Error codes and diagnostics ***
[2025-12-01 23:55:14]     "exeErrorCode": 0,
[2025-12-01 23:55:14]     "exeErrorDiag": "",
[2025-12-01 23:55:14]     "pilotErrorCode": 0,
[2025-12-01 23:55:14]     "pilotErrorDiag": "",
[2025-12-01 23:55:14]  *** Listing of results directory ***
[2025-12-01 23:55:14] total 1308080
[2025-12-01 23:55:14] -rw-r--r-- 1 boinc boinc    576529 Nov 27 09:46 pilot3.tar.gz
[2025-12-01 23:55:14] -rwx------ 1 boinc boinc     36292 Nov 27 09:49 runpilot2-wrapper.sh
[2025-12-01 23:55:14] -rw-r--r-- 1 boinc boinc      5112 Nov 27 09:53 queuedata.json
[2025-12-01 23:55:14] -rw-r--r-- 1 boinc boinc       100 Dec  1 16:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-01 23:55:14] -rwxr-xr-x 1 boinc boinc      7986 Dec  1 16:16 run_atlas
[2025-12-01 23:55:14] -rw-r--r-- 1 boinc boinc       105 Dec  1 16:16 job.xml
[2025-12-01 23:55:14] -rw-r--r-- 2 boinc boinc 410515358 Dec  1 16:16 EVNT.47483658._003393.pool.root.1
[2025-12-01 23:55:14] drwxrwx--x 2 boinc boinc      4096 Dec  1 16:16 shared
[2025-12-01 23:55:14] -rw-r--r-- 2 boinc boinc    590106 Dec  1 16:16 input.tar.gz
[2025-12-01 23:55:14] -rw-r--r-- 2 boinc boinc     15847 Dec  1 16:16 start_atlas.sh
[2025-12-01 23:55:14] -rw-r--r-- 1 boinc boinc         0 Dec  1 16:16 boinc_setup_complete
[2025-12-01 23:55:14] -rw-r--r-- 1 boinc boinc      6449 Dec  1 16:16 init_data.xml
[2025-12-01 23:55:14] -rw-r--r-- 1 boinc boinc         0 Dec  1 16:16 boinc_lockfile
[2025-12-01 23:55:14] -rw-r--r-- 1 boinc boinc      2787 Dec  1 16:16 pandaJob.out
[2025-12-01 23:55:14] -rw------- 1 boinc boinc    992142 Dec  1 16:16 agis_schedconf.cvmfs.json
[2025-12-01 23:55:14] drwx------ 5 boinc boinc      4096 Dec  1 16:16 pilot3
[2025-12-01 23:55:14] -rw-r--r-- 1 boinc boinc       531 Dec  1 23:51 boinc_task_state.xml
[2025-12-01 23:55:14] -rw------- 1 boinc boinc 914992836 Dec  1 23:54 HITS.47556173._003494.pool.root.1
[2025-12-01 23:55:14] -rw------- 1 boinc boinc        95 Dec  1 23:54 pilot_heartbeat.json
[2025-12-01 23:55:14] -rw------- 1 boinc boinc      1035 Dec  1 23:54 memory_monitor_summary.json
[2025-12-01 23:55:14] -rw------- 1 boinc boinc   1516240 Dec  1 23:54 agis_ddmendpoints.agis.ALL.json
[2025-12-01 23:55:14] -rw------- 1 boinc boinc   1151623 Dec  1 23:54 log.47556173._003494.job.log.tgz.1
[2025-12-01 23:55:14] -rw------- 1 boinc boinc      8568 Dec  1 23:54 heartbeat.json
[2025-12-01 23:55:14] -rw-r--r-- 1 boinc boinc      8192 Dec  1 23:55 boinc_mmap_file
[2025-12-01 23:55:14] -rw-r--r-- 1 boinc boinc        28 Dec  1 23:55 wrapper_checkpoint.txt
[2025-12-01 23:55:14] -rw------- 1 boinc boinc      4628 Dec  1 23:55 pilotlog.txt
[2025-12-01 23:55:14] -rw------- 1 boinc boinc   3875918 Dec  1 23:55 log.47556173._003494.job.log.1
[2025-12-01 23:55:14] -rw------- 1 boinc boinc       353 Dec  1 23:55 output.list
[2025-12-01 23:55:14] -rw-r--r-- 1 boinc boinc       620 Dec  1 23:55 runtime_log
[2025-12-01 23:55:14] -rw------- 1 boinc boinc   5048320 Dec  1 23:55 result.tar.gz
[2025-12-01 23:55:14] -rw-r--r-- 1 boinc boinc      8918 Dec  1 23:55 runtime_log.err
[2025-12-01 23:55:14] -rw------- 1 boinc boinc       669 Dec  1 23:55 1ZpNDm9rmi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm2gKKDmc0ANXn.diag
[2025-12-01 23:55:14] -rw-r--r-- 1 boinc boinc      8990 Dec  1 23:55 stderr.txt
[2025-12-01 23:55:14] HITS file was successfully produced:
[2025-12-01 23:55:14] -rw------- 1 boinc boinc 914992836 Dec  1 23:54 shared/HITS.pool.root.1
[2025-12-01 23:55:14]  *** Contents of shared directory: ***
[2025-12-01 23:55:14] total 1299980
[2025-12-01 23:55:14] -rw-r--r-- 2 boinc boinc 410515358 Dec  1 16:16 ATLAS.root_0
[2025-12-01 23:55:14] -rw-r--r-- 2 boinc boinc    590106 Dec  1 16:16 input.tar.gz
[2025-12-01 23:55:14] -rw-r--r-- 2 boinc boinc     15847 Dec  1 16:16 start_atlas.sh
[2025-12-01 23:55:14] -rw------- 1 boinc boinc 914992836 Dec  1 23:54 HITS.pool.root.1
[2025-12-01 23:55:14] -rw------- 1 boinc boinc   5048320 Dec  1 23:55 result.tar.gz
23:55:15 (1259793): run_atlas exited; CPU time 81192.955575
23:55:15 (1259793): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN