Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
22:34:07 (1038217): wrapper (7.7.26015): starting
22:34:07 (1038217): wrapper: running run_atlas (--nthreads 4)
[2025-12-01 22:34:07] Arguments: --nthreads 4
[2025-12-01 22:34:07] Threads: 4
[2025-12-01 22:34:07] Checking for CVMFS
[2025-12-01 22:34:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-01 22:34:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-01 22:34:08] Running cvmfs_config stat atlas.cern.ch
[2025-12-01 22:34:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-01 22:34:08] 2.9.2.0 2420625 18885 110296 153532 2 81 33893282 36864001 0 130560 1 7441664 99.956 847140 786 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-01 22:34:08] CVMFS is ok
[2025-12-01 22:34:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-01 22:34:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-01 22:34:08] Further information can be found at the LHC@home message board.
[2025-12-01 22:34:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-01 22:34:08] Checking for apptainer binary...
[2025-12-01 22:34:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-01 22:34:08] Running /usr/bin/apptainer --version
[2025-12-01 22:34:08] apptainer version 1.4.1-1.1
[2025-12-01 22:34:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-01 22:34:08] thA350a
[2025-12-01 22:34:08] apptainer works
[2025-12-01 22:34:08] Set ATHENA_PROC_NUMBER=4
[2025-12-01 22:34:08] Set ATHENA_CORE_NUMBER=4
[2025-12-01 22:34:08] Starting ATLAS job with PandaID=6894247055
[2025-12-01 22:34:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 05:32:54]  *** The last 200 lines of the pilot log: ***
[2025-12-02 05:32:54] 2025-12-02 04:32:16,144 | INFO     | time since job start (25080s) is within the limit (172800.0s)
[2025-12-02 05:32:54] 2025-12-02 04:32:17,301 | INFO     | monitor loop #1906: job 0:6894247055 is in state 'finished'
[2025-12-02 05:32:54] 2025-12-02 04:32:17,301 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 05:32:54] 2025-12-02 04:32:18,148 | INFO     | time since job start (25082s) is within the limit (172800.0s)
[2025-12-02 05:32:54] 2025-12-02 04:32:18,326 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-02 05:32:54] 2025-12-02 04:32:18,327 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3306.7639375
[2025-12-02 05:32:54] 2025-12-02 04:32:18,329 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6894247055/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 05:32:54] 2025-12-02 04:32:18,329 | INFO     | extracted standard info from prmon json
[2025-12-02 05:32:54] 2025-12-02 04:32:18,329 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 05:32:54] 2025-12-02 04:32:18,329 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 05:32:54] 2025-12-02 04:32:18,332 | INFO     | fitting pss+swap vs Time
[2025-12-02 05:32:54] 2025-12-02 04:32:18,332 | INFO     | sum of square deviations: 21527882710.0
[2025-12-02 05:32:54] 2025-12-02 04:32:18,334 | INFO     | sum of deviations: 232393475160.99997
[2025-12-02 05:32:54] 2025-12-02 04:32:18,334 | INFO     | mean x: 1764637385.0
[2025-12-02 05:32:54] 2025-12-02 04:32:18,334 | INFO     | mean y: 2355427.6350364964
[2025-12-02 05:32:54] 2025-12-02 04:32:18,334 | INFO     | intersect: -19046903611.14061
[2025-12-02 05:32:54] 2025-12-02 04:32:18,334 | INFO     | chi2: 4.444153524678367
[2025-12-02 05:32:54] 2025-12-02 04:32:18,334 | INFO     | sum of square deviations: 20751710017.5
[2025-12-02 05:32:54] 2025-12-02 04:32:18,336 | INFO     | sum of deviations: 306615606990.49994
[2025-12-02 05:32:54] 2025-12-02 04:32:18,336 | INFO     | mean x: 1764637232.5
[2025-12-02 05:32:54] 2025-12-02 04:32:18,336 | INFO     | mean y: 2369971.5591133004
[2025-12-02 05:32:54] 2025-12-02 04:32:18,336 | INFO     | intersect: -26070918239.616783
[2025-12-02 05:32:54] 2025-12-02 04:32:18,336 | INFO     | chi2: 2.656905060411555
[2025-12-02 05:32:54] 2025-12-02 04:32:18,336 | INFO     | current chi2=2.656905060411555 (change=40.21572284445685 %)
[2025-12-02 05:32:54] 2025-12-02 04:32:18,336 | INFO     | sum of square deviations: 19994421400.0
[2025-12-02 05:32:54] 2025-12-02 04:32:18,338 | INFO     | sum of deviations: 301673067685.9999
[2025-12-02 05:32:54] 2025-12-02 04:32:18,338 | INFO     | mean x: 1764637080.0
[2025-12-02 05:32:54] 2025-12-02 04:32:18,338 | INFO     | mean y: 2368976.4314214466
[2025-12-02 05:32:54] 2025-12-02 04:32:18,338 | INFO     | intersect: -26622231487.17915
[2025-12-02 05:32:54] 2025-12-02 04:32:18,338 | INFO     | chi2: 2.652322157532953
[2025-12-02 05:32:54] 2025-12-02 04:32:18,338 | INFO     | current chi2=2.652322157532953 (change=0.1724902762574382 %)
[2025-12-02 05:32:54] 2025-12-02 04:32:18,338 | INFO     | right removable region: 400
[2025-12-02 05:32:54] 2025-12-02 04:32:18,338 | INFO     | sum of square deviations: 20751710017.5
[2025-12-02 05:32:54] 2025-12-02 04:32:18,340 | INFO     | sum of deviations: 136703963410.49997
[2025-12-02 05:32:54] 2025-12-02 04:32:18,340 | INFO     | mean x: 1764637537.5
[2025-12-02 05:32:54] 2025-12-02 04:32:18,340 | INFO     | mean y: 2374198.5147783253
[2025-12-02 05:32:54] 2025-12-02 04:32:18,340 | INFO     | intersect: -11622351915.899988
[2025-12-02 05:32:54] 2025-12-02 04:32:18,340 | INFO     | chi2: 2.246214000165814
[2025-12-02 05:32:54] 2025-12-02 04:32:18,340 | INFO     | current chi2=2.246214000165814 (change=49.456876597700855 %)
[2025-12-02 05:32:54] 2025-12-02 04:32:18,340 | INFO     | sum of square deviations: 19994421400.0
[2025-12-02 05:32:54] 2025-12-02 04:32:18,342 | INFO     | sum of deviations: 101970525377.00002
[2025-12-02 05:32:54] 2025-12-02 04:32:18,342 | INFO     | mean x: 1764637690.0
[2025-12-02 05:32:54] 2025-12-02 04:32:18,342 | INFO     | mean y: 2381159.3516209475
[2025-12-02 05:32:54] 2025-12-02 04:32:18,342 | INFO     | intersect: -8997180705.907238
[2025-12-02 05:32:54] 2025-12-02 04:32:18,342 | INFO     | chi2: 1.86730421872932
[2025-12-02 05:32:54] 2025-12-02 04:32:18,342 | INFO     | current chi2=1.86730421872932 (change=16.868819329259065 %)
[2025-12-02 05:32:54] 2025-12-02 04:32:18,342 | INFO     | left removable region: 20
[2025-12-02 05:32:54] 2025-12-02 04:32:18,342 | INFO     | sum of square deviations: 17014774835.0
[2025-12-02 05:32:54] 2025-12-02 04:32:18,344 | INFO     | sum of deviations: 154127590227.00003
[2025-12-02 05:32:54] 2025-12-02 04:32:18,344 | INFO     | mean x: 1764637659.5
[2025-12-02 05:32:54] 2025-12-02 04:32:18,344 | INFO     | mean y: 2399583.789473684
[2025-12-02 05:32:54] 2025-12-02 04:32:18,344 | INFO     | intersect: -15982493117.997982
[2025-12-02 05:32:54] 2025-12-02 04:32:18,344 | INFO     | chi2: 0.05375094444721432
[2025-12-02 05:32:54] 2025-12-02 04:32:18,344 | INFO     | current memory leak: 9.06 B/s (using 380 data points, chi2=0.05)
[2025-12-02 05:32:54] 2025-12-02 04:32:18,344 | INFO     | could have reported an average CPU frequency of 3747 MHz (17 samples)
[2025-12-02 05:32:54] 2025-12-02 04:32:18,344 | INFO     | ..............................
[2025-12-02 05:32:54] 2025-12-02 04:32:18,344 | INFO     | . Timing measurements:
[2025-12-02 05:32:54] 2025-12-02 04:32:18,344 | INFO     | . get job = 0 s
[2025-12-02 05:32:54] 2025-12-02 04:32:18,344 | INFO     | . initial setup = 1 s
[2025-12-02 05:32:54] 2025-12-02 04:32:18,345 | INFO     | . payload setup = 4 s
[2025-12-02 05:32:54] 2025-12-02 04:32:18,345 | INFO     | . stage-in = 0 s
[2025-12-02 05:32:54] 2025-12-02 04:32:18,345 | INFO     | . payload execution = 25050 s
[2025-12-02 05:32:54] 2025-12-02 04:32:18,345 | INFO     | . stage-out = 1 s
[2025-12-02 05:32:54] 2025-12-02 04:32:18,345 | INFO     | . log creation = 0 s
[2025-12-02 05:32:54] 2025-12-02 04:32:18,345 | INFO     | ..............................
[2025-12-02 05:32:54] 2025-12-02 04:32:18,403 | INFO     | 
[2025-12-02 05:32:54] 2025-12-02 04:32:18,403 | INFO     | job summary report
[2025-12-02 05:32:54] 2025-12-02 04:32:18,403 | INFO     | --------------------------------------------------
[2025-12-02 05:32:54] 2025-12-02 04:32:18,403 | INFO     | PanDA job id: 6894247055
[2025-12-02 05:32:54] 2025-12-02 04:32:18,403 | INFO     | task id: 47533962
[2025-12-02 05:32:54] 2025-12-02 04:32:18,403 | INFO     | errors: (none)
[2025-12-02 05:32:54] 2025-12-02 04:32:18,403 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 05:32:54] 2025-12-02 04:32:18,403 | INFO     | pilot state: finished 
[2025-12-02 05:32:54] 2025-12-02 04:32:18,404 | INFO     | transexitcode: 0
[2025-12-02 05:32:54] 2025-12-02 04:32:18,404 | INFO     | exeerrorcode: 0
[2025-12-02 05:32:54] 2025-12-02 04:32:18,404 | INFO     | exeerrordiag: 
[2025-12-02 05:32:54] 2025-12-02 04:32:18,404 | INFO     | exitcode: 0
[2025-12-02 05:32:54] 2025-12-02 04:32:18,404 | INFO     | exitmsg: OK
[2025-12-02 05:32:54] 2025-12-02 04:32:18,404 | INFO     | cpuconsumptiontime: 98097 s
[2025-12-02 05:32:54] 2025-12-02 04:32:18,404 | INFO     | nevents: 1000
[2025-12-02 05:32:54] 2025-12-02 04:32:18,404 | INFO     | neventsw: 0
[2025-12-02 05:32:54] 2025-12-02 04:32:18,404 | INFO     | pid: 1048609
[2025-12-02 05:32:54] 2025-12-02 04:32:18,404 | INFO     | pgrp: 1048609
[2025-12-02 05:32:54] 2025-12-02 04:32:18,404 | INFO     | corecount: 4
[2025-12-02 05:32:54] 2025-12-02 04:32:18,404 | INFO     | event service: False
[2025-12-02 05:32:54] 2025-12-02 04:32:18,404 | INFO     | sizes: {0: 2284318, 4: 2284580, 11: 2284608, 25058: 2321641, 25059: 2330641, 25061: 2330697, 25067: 2331135}
[2025-12-02 05:32:54] 2025-12-02 04:32:18,404 | INFO     | --------------------------------------------------
[2025-12-02 05:32:54] 2025-12-02 04:32:18,404 | INFO     | 
[2025-12-02 05:32:54] 2025-12-02 04:32:18,404 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-02 05:32:54] 2025-12-02 04:32:18,424 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 05:32:54] 2025-12-02 04:32:18,425 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 05:32:54] 2025-12-02 04:32:18,425 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 05:32:54] 2025-12-02 04:32:18,425 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 05:32:54] 2025-12-02 04:32:18,425 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 05:32:54] 2025-12-02 04:32:18,425 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 05:32:54] 2025-12-02 04:32:18,425 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 05:32:54] 2025-12-02 04:32:18,425 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 05:32:54] 2025-12-02 04:32:18,425 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 05:32:54] 2025-12-02 04:32:18,425 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 05:32:54] 2025-12-02 04:32:18,425 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 05:32:54] 2025-12-02 04:32:18,425 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 05:32:54] 2025-12-02 04:32:18,425 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 05:32:54] 2025-12-02 04:32:18,425 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 05:32:54] 2025-12-02 04:32:18,425 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 05:32:54] 2025-12-02 04:32:18,425 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 05:32:54] 2025-12-02 04:32:18,425 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 05:32:54] 2025-12-02 04:32:18,426 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 05:32:54] 2025-12-02 04:32:18,426 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 05:32:54] 2025-12-02 04:32:18,426 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 05:32:54] 2025-12-02 04:32:18,426 | INFO     | job 6894247055 has completed (purged errors)
[2025-12-02 05:32:54] 2025-12-02 04:32:18,426 | INFO     | overall cleanup function is called
[2025-12-02 05:32:54] 2025-12-02 04:32:19,436 | INFO     | --- collectZombieJob: --- 10, [1048609]
[2025-12-02 05:32:54] 2025-12-02 04:32:19,436 | INFO     | zombie collector waiting for pid 1048609
[2025-12-02 05:32:54] 2025-12-02 04:32:19,436 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 05:32:54] 2025-12-02 04:32:19,436 | INFO     | collected zombie processes
[2025-12-02 05:32:54] 2025-12-02 04:32:19,436 | INFO     | will attempt to kill all subprocesses of pid=1048609
[2025-12-02 05:32:54] 2025-12-02 04:32:19,496 | INFO     | process IDs to be killed: [1048609] (in reverse order)
[2025-12-02 05:32:54] 2025-12-02 04:32:19,535 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 05:32:54] 2025-12-02 04:32:19,535 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 05:32:54] 2025-12-02 04:32:19,538 | INFO     | did not find any defunct processes belonging to 1048609
[2025-12-02 05:32:54] 2025-12-02 04:32:19,540 | INFO     | did not find any defunct processes belonging to 1048609
[2025-12-02 05:32:54] 2025-12-02 04:32:19,541 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 05:32:54] 2025-12-02 04:32:19,541 | INFO     | ready for new job
[2025-12-02 05:32:54] 2025-12-02 04:32:19,541 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 05:32:54] 2025-12-02 04:32:19,542 | INFO     | ***************************************
[2025-12-02 05:32:54] 2025-12-02 04:32:19,542 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 05:32:54] 2025-12-02 04:32:19,542 | INFO     | ***************************************
[2025-12-02 05:32:54] 2025-12-02 04:32:19,542 | INFO     | 
[2025-12-02 05:32:54] 2025-12-02 04:32:19,543 | INFO     | architecture information:
[2025-12-02 05:32:54] 2025-12-02 04:32:19,543 | INFO     | executing command: cat /etc/os-release
[2025-12-02 05:32:54] 2025-12-02 04:32:19,558 | INFO     | cat /etc/os-release:
[2025-12-02 05:32:54] NAME="CentOS Linux"
[2025-12-02 05:32:54] VERSION="7 (Core)"
[2025-12-02 05:32:54] ID="centos"
[2025-12-02 05:32:54] ID_LIKE="rhel fedora"
[2025-12-02 05:32:54] VERSION_ID="7"
[2025-12-02 05:32:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 05:32:54] ANSI_COLOR="0;31"
[2025-12-02 05:32:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 05:32:54] HOME_URL="https://www.centos.org/"
[2025-12-02 05:32:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 05:32:54] 
[2025-12-02 05:32:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 05:32:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 05:32:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 05:32:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 05:32:54] 
[2025-12-02 05:32:54] 2025-12-02 04:32:19,558 | INFO     | ***************************************
[2025-12-02 05:32:54] 2025-12-02 04:32:20,061 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-02 05:32:54] 2025-12-02 04:32:20,079 | INFO     | sufficient remaining disk space (220893020160 B)
[2025-12-02 05:32:54] 2025-12-02 04:32:20,079 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 05:32:54] 2025-12-02 04:32:20,079 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 05:32:54] 2025-12-02 04:32:20,079 | INFO     | update_server=False
[2025-12-02 05:32:54] 2025-12-02 04:32:20,079 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 05:32:54] 2025-12-02 04:32:20,080 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-02 05:32:54] 2025-12-02 04:32:20,080 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 05:32:54] 2025-12-02 04:32:20,080 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 05:32:54] 2025-12-02 04:32:20,080 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 05:32:54] 2025-12-02 04:32:20,080 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 05:32:54] 2025-12-02 04:32:20,670 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 05:32:54] 2025-12-02 04:32:20,810 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 05:32:54] 2025-12-02 04:32:20,811 | INFO     | aborting loop
[2025-12-02 05:32:54] 2025-12-02 04:32:20,938 | INFO     | all job control threads have been joined
[2025-12-02 05:32:54] 2025-12-02 04:32:20,941 | INFO     | all data control threads have been joined
[2025-12-02 05:32:54] 2025-12-02 04:32:21,085 | INFO     | [job] retrieve thread has finished
[2025-12-02 05:32:54] 2025-12-02 04:32:21,086 | INFO     | [job] queue monitor thread has finished
[2025-12-02 05:32:54] 2025-12-02 04:32:21,137 | INFO     | [payload] validate_post thread has finished
[2025-12-02 05:32:54] 2025-12-02 04:32:21,196 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 05:32:54] 2025-12-02 04:32:21,399 | INFO     | [payload] failed_post thread has finished
[2025-12-02 05:32:54] 2025-12-02 04:32:21,569 | INFO     | all payload control threads have been joined
[2025-12-02 05:32:54] 2025-12-02 04:32:21,816 | INFO     | [job] job monitor thread has finished
[2025-12-02 05:32:54] 2025-12-02 04:32:21,899 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 05:32:54] 2025-12-02 04:32:21,912 | INFO     | [data] copytool_in thread has finished
[2025-12-02 05:32:54] 2025-12-02 04:32:21,944 | INFO     | [job] control thread has finished
[2025-12-02 05:32:54] 2025-12-02 04:32:21,947 | INFO     | [data] control thread has finished
[2025-12-02 05:32:54] 2025-12-02 04:32:22,087 | INFO     | [job] validate thread has finished
[2025-12-02 05:32:54] 2025-12-02 04:32:22,408 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 05:32:54] 2025-12-02 04:32:22,463 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 05:32:54] 2025-12-02 04:32:22,575 | INFO     | [payload] control thread has finished
[2025-12-02 05:32:54] 2025-12-02 04:32:22,675 | INFO     | [data] copytool_out thread has finished
[2025-12-02 05:32:54] 2025-12-02 04:32:22,731 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 05:32:54] 2025-12-02 04:32:26,737 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 05:32:54] 2025-12-02 04:32:48,489 | INFO     | [monitor] cgroup control has ended
[2025-12-02 05:32:54] 2025-12-02 04:32:49,593 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140345337747264)>', '<ExcThread(monitor, started 140343953581824)>']
[2025-12-02 05:32:54] 2025-12-02 04:32:50,239 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 05:32:54] 2025-12-02 04:32:50,240 | INFO     | [monitor] control thread has ended
[2025-12-02 05:32:54] 2025-12-02 04:32:54,619 | INFO     | all workflow threads have been joined
[2025-12-02 05:32:54] 2025-12-02 04:32:54,619 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 05:32:54] 2025-12-02 04:32:54,620 | INFO     | traces error code: 0
[2025-12-02 05:32:54] 2025-12-02 04:32:54,620 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 05:32:54] 2025-12-02 04:32:54,700 [wrapper] ==== pilot stdout END ====
[2025-12-02 05:32:54] 2025-12-02 04:32:54,705 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 05:32:54] 2025-12-02 04:32:54,709 [wrapper] pilotpid: 1042010
[2025-12-02 05:32:54] 2025-12-02 04:32:54,713 [wrapper] Pilot exit status: 0
[2025-12-02 05:32:54] 2025-12-02 04:32:54,725 [wrapper] pandaids: 6894247055
[2025-12-02 05:32:54] 2025-12-02 04:32:54,751 [wrapper] cleanup supervisor_pilot 1096566 1042011
[2025-12-02 05:32:54] 2025-12-02 04:32:54,755 [wrapper] Test setup, not cleaning
[2025-12-02 05:32:54] 2025-12-02 04:32:54,759 [wrapper] apfmon messages muted
[2025-12-02 05:32:54] 2025-12-02 04:32:54,763 [wrapper] ==== wrapper stdout END ====
[2025-12-02 05:32:54] 2025-12-02 04:32:54,767 [wrapper] ==== wrapper stderr END ====
[2025-12-02 05:32:54]  *** Error codes and diagnostics ***
[2025-12-02 05:32:54]     "exeErrorCode": 0,
[2025-12-02 05:32:54]     "exeErrorDiag": "",
[2025-12-02 05:32:54]     "pilotErrorCode": 0,
[2025-12-02 05:32:54]     "pilotErrorDiag": "",
[2025-12-02 05:32:54]  *** Listing of results directory ***
[2025-12-02 05:32:54] total 1313684
[2025-12-02 05:32:54] -rw-r--r-- 1 boinc boinc    576529 Nov 27 02:09 pilot3.tar.gz
[2025-12-02 05:32:54] -rwx------ 1 boinc boinc     36292 Nov 27 02:28 runpilot2-wrapper.sh
[2025-12-02 05:32:54] -rw-r--r-- 1 boinc boinc      5112 Nov 27 02:31 queuedata.json
[2025-12-02 05:32:54] -rw-r--r-- 1 boinc boinc       100 Dec  1 22:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 05:32:54] -rwxr-xr-x 1 boinc boinc      7986 Dec  1 22:34 run_atlas
[2025-12-02 05:32:54] -rw-r--r-- 1 boinc boinc       105 Dec  1 22:34 job.xml
[2025-12-02 05:32:54] -rw-r--r-- 2 boinc boinc 410479790 Dec  1 22:34 EVNT.47493127._001033.pool.root.1
[2025-12-02 05:32:54] drwxrwx--x 2 boinc boinc      4096 Dec  1 22:34 shared
[2025-12-02 05:32:54] -rw-r--r-- 2 boinc boinc    590114 Dec  1 22:34 input.tar.gz
[2025-12-02 05:32:54] -rw-r--r-- 2 boinc boinc     15847 Dec  1 22:34 start_atlas.sh
[2025-12-02 05:32:54] -rw-r--r-- 1 boinc boinc         0 Dec  1 22:34 boinc_setup_complete
[2025-12-02 05:32:54] -rw-r--r-- 1 boinc boinc      6380 Dec  1 22:34 init_data.xml
[2025-12-02 05:32:54] -rw-r--r-- 1 boinc boinc         0 Dec  1 22:34 boinc_lockfile
[2025-12-02 05:32:54] -rw-r--r-- 1 boinc boinc      2787 Dec  1 22:34 pandaJob.out
[2025-12-02 05:32:54] -rw------- 1 boinc boinc    992004 Dec  1 22:34 agis_schedconf.cvmfs.json
[2025-12-02 05:32:54] drwx------ 5 boinc boinc      4096 Dec  1 22:34 pilot3
[2025-12-02 05:32:54] -rw-r--r-- 1 boinc boinc       531 Dec  2 05:27 boinc_task_state.xml
[2025-12-02 05:32:54] -rw------- 1 boinc boinc 921232105 Dec  2 05:31 HITS.47533962._000326.pool.root.1
[2025-12-02 05:32:54] -rw------- 1 boinc boinc        95 Dec  2 05:31 pilot_heartbeat.json
[2025-12-02 05:32:54] -rw------- 1 boinc boinc      1026 Dec  2 05:32 memory_monitor_summary.json
[2025-12-02 05:32:54] -rw------- 1 boinc boinc   1516240 Dec  2 05:32 agis_ddmendpoints.agis.ALL.json
[2025-12-02 05:32:54] -rw------- 1 boinc boinc   1259347 Dec  2 05:32 log.47533962._000326.job.log.tgz.1
[2025-12-02 05:32:54] -rw------- 1 boinc boinc      8573 Dec  2 05:32 heartbeat.json
[2025-12-02 05:32:54] -rw-r--r-- 1 boinc boinc        28 Dec  2 05:32 wrapper_checkpoint.txt
[2025-12-02 05:32:54] -rw-r--r-- 1 boinc boinc      8192 Dec  2 05:32 boinc_mmap_file
[2025-12-02 05:32:54] -rw------- 1 boinc boinc      4556 Dec  2 05:32 pilotlog.txt
[2025-12-02 05:32:54] -rw------- 1 boinc boinc   3532422 Dec  2 05:32 log.47533962._000326.job.log.1
[2025-12-02 05:32:54] -rw------- 1 boinc boinc       353 Dec  2 05:32 output.list
[2025-12-02 05:32:54] -rw-r--r-- 1 boinc boinc       620 Dec  2 05:32 runtime_log
[2025-12-02 05:32:54] -rw------- 1 boinc boinc   4812800 Dec  2 05:32 result.tar.gz
[2025-12-02 05:32:54] -rw-r--r-- 1 boinc boinc      8903 Dec  2 05:32 runtime_log.err
[2025-12-02 05:32:54] -rw------- 1 boinc boinc       667 Dec  2 05:32 32KNDmmzfi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmnTKKDm8QDbpn.diag
[2025-12-02 05:32:54] -rw-r--r-- 1 boinc boinc     21185 Dec  2 05:32 stderr.txt
[2025-12-02 05:32:54] HITS file was successfully produced:
[2025-12-02 05:32:54] -rw------- 1 boinc boinc 921232105 Dec  2 05:31 shared/HITS.pool.root.1
[2025-12-02 05:32:54]  *** Contents of shared directory: ***
[2025-12-02 05:32:54] total 1305804
[2025-12-02 05:32:54] -rw-r--r-- 2 boinc boinc 410479790 Dec  1 22:34 ATLAS.root_0
[2025-12-02 05:32:54] -rw-r--r-- 2 boinc boinc    590114 Dec  1 22:34 input.tar.gz
[2025-12-02 05:32:54] -rw-r--r-- 2 boinc boinc     15847 Dec  1 22:34 start_atlas.sh
[2025-12-02 05:32:54] -rw------- 1 boinc boinc 921232105 Dec  2 05:31 HITS.pool.root.1
[2025-12-02 05:32:54] -rw------- 1 boinc boinc   4812800 Dec  2 05:32 result.tar.gz
05:32:56 (1038217): run_atlas exited; CPU time 98086.895563
05:32:56 (1038217): called boinc_finish(0)

</stderr_txt>
]]>

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