Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:32:42 (1129068): wrapper (7.7.26015): starting
00:32:42 (1129068): wrapper: running run_atlas (--nthreads 3)
[2025-12-01 00:32:42] Arguments: --nthreads 3
[2025-12-01 00:32:42] Threads: 3
[2025-12-01 00:32:42] Checking for CVMFS
[2025-12-01 00:32:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-01 00:32:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-01 00:32:42] Running cvmfs_config stat atlas.cern.ch
[2025-12-01 00:32:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-01 00:32:42] 2.9.2.0 2923852 17838 100564 153498 2 81 19154667 36864000 0 130560 1 6687126 99.951 815569 971 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-01 00:32:42] CVMFS is ok
[2025-12-01 00:32:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-01 00:32:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-01 00:32:42] Further information can be found at the LHC@home message board.
[2025-12-01 00:32:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-01 00:32:42] Checking for apptainer binary...
[2025-12-01 00:32:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-01 00:32:42] Running /usr/bin/apptainer --version
[2025-12-01 00:32:43] apptainer version 1.4.1-1.1
[2025-12-01 00:32:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-01 00:32:43] magicA161a
[2025-12-01 00:32:43] apptainer works
[2025-12-01 00:32:43] Set ATHENA_PROC_NUMBER=3
[2025-12-01 00:32:43] Set ATHENA_CORE_NUMBER=3
[2025-12-01 00:32:43] Starting ATLAS job with PandaID=6892527811
[2025-12-01 00:32:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-01 08:13:25]  *** The last 200 lines of the pilot log: ***
[2025-12-01 08:13:25] 2025-12-01 07:12:25,629 | INFO     | ***************************************
[2025-12-01 08:13:25] 2025-12-01 07:12:25,629 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-01 08:13:25] 2025-12-01 07:12:25,629 | INFO     | ***************************************
[2025-12-01 08:13:25] 2025-12-01 07:12:25,629 | INFO     | 
[2025-12-01 08:13:25] 2025-12-01 07:12:25,629 | INFO     | architecture information:
[2025-12-01 08:13:25] 2025-12-01 07:12:25,629 | INFO     | executing command: cat /etc/os-release
[2025-12-01 08:13:25] 2025-12-01 07:12:25,637 | INFO     | cat /etc/os-release:
[2025-12-01 08:13:25] NAME="CentOS Linux"
[2025-12-01 08:13:25] VERSION="7 (Core)"
[2025-12-01 08:13:25] ID="centos"
[2025-12-01 08:13:25] ID_LIKE="rhel fedora"
[2025-12-01 08:13:25] VERSION_ID="7"
[2025-12-01 08:13:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-01 08:13:25] ANSI_COLOR="0;31"
[2025-12-01 08:13:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-01 08:13:25] HOME_URL="https://www.centos.org/"
[2025-12-01 08:13:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-01 08:13:25] 
[2025-12-01 08:13:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-01 08:13:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-01 08:13:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-01 08:13:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-01 08:13:25] 
[2025-12-01 08:13:25] 2025-12-01 07:12:25,637 | INFO     | ***************************************
[2025-12-01 08:13:25] 2025-12-01 07:12:26,141 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-01 08:13:25] 2025-12-01 07:12:26,153 | INFO     | sufficient remaining disk space (383171690496 B)
[2025-12-01 08:13:25] 2025-12-01 07:12:26,153 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-01 08:13:25] 2025-12-01 07:12:26,153 | INFO     | current server update state: UPDATING_FINAL
[2025-12-01 08:13:25] 2025-12-01 07:12:26,153 | INFO     | update_server=False
[2025-12-01 08:13:25] 2025-12-01 07:12:26,154 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-01 08:13:25] 2025-12-01 07:12:26,154 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-01 08:13:25] 2025-12-01 07:12:26,154 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-01 08:13:25] 2025-12-01 07:12:26,154 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-01 08:13:25] 2025-12-01 07:12:26,154 | INFO     | found 0 job(s) in 20 queues
[2025-12-01 08:13:25] 2025-12-01 07:12:26,154 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-01 08:13:25] 2025-12-01 07:12:26,154 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-01 08:13:25] 2025-12-01 07:12:26,487 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-01 08:13:25] 2025-12-01 07:12:26,488 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-01 08:13:25] 2025-12-01 07:12:26,488 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-01 08:13:25] 2025-12-01 07:12:26,488 | INFO     | will abort loop
[2025-12-01 08:13:25] 2025-12-01 07:12:26,717 | INFO     | all payload control threads have been joined
[2025-12-01 08:13:25] 2025-12-01 07:12:26,819 | INFO     | all data control threads have been joined
[2025-12-01 08:13:25] 2025-12-01 07:12:27,119 | INFO     | all job control threads have been joined
[2025-12-01 08:13:25] 2025-12-01 07:12:27,159 | INFO     | [job] retrieve thread has finished
[2025-12-01 08:13:25] 2025-12-01 07:12:27,159 | INFO     | [job] queue monitor thread has finished
[2025-12-01 08:13:25] 2025-12-01 07:12:27,174 | INFO     | [payload] validate_post thread has finished
[2025-12-01 08:13:25] 2025-12-01 07:12:27,493 | INFO     | [job] job monitor thread has finished
[2025-12-01 08:13:25] 2025-12-01 07:12:27,587 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-01 08:13:25] 2025-12-01 07:12:27,599 | INFO     | [payload] validate_pre thread has finished
[2025-12-01 08:13:25] 2025-12-01 07:12:27,629 | INFO     | [job] validate thread has finished
[2025-12-01 08:13:25] 2025-12-01 07:12:27,640 | INFO     | [job] create_data_payload thread has finished
[2025-12-01 08:13:25] 2025-12-01 07:12:27,723 | INFO     | [payload] control thread has finished
[2025-12-01 08:13:25] 2025-12-01 07:12:27,825 | INFO     | [data] control thread has finished
[2025-12-01 08:13:25] 2025-12-01 07:12:28,125 | INFO     | [job] control thread has finished
[2025-12-01 08:13:25] 2025-12-01 07:12:28,151 | INFO     | [payload] execute_payloads thread has finished
[2025-12-01 08:13:25] 2025-12-01 07:12:28,159 | INFO     | [data] copytool_out thread has finished
[2025-12-01 08:13:25] 2025-12-01 07:12:28,214 | INFO     | [payload] failed_post thread has finished
[2025-12-01 08:13:25] 2025-12-01 07:12:28,354 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-01 08:13:25] 2025-12-01 07:12:28,602 | INFO     | [data] copytool_in thread has finished
[2025-12-01 08:13:25] 2025-12-01 07:12:31,594 | INFO     | [data] queue_monitor thread has finished
[2025-12-01 08:13:25] 2025-12-01 07:13:19,324 | INFO     | [monitor] cgroup control has ended
[2025-12-01 08:13:25] 2025-12-01 07:13:19,968 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139660819461952)>', '<ExcThread(monitor, started 139660189759232)>']
[2025-12-01 08:13:25] 2025-12-01 07:13:20,442 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-01 08:13:25] 2025-12-01 07:13:20,442 | INFO     | [monitor] control thread has ended
[2025-12-01 08:13:25] 2025-12-01 07:13:24,980 | INFO     | all workflow threads have been joined
[2025-12-01 08:13:25] 2025-12-01 07:13:24,980 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-01 08:13:25] 2025-12-01 07:13:24,980 | INFO     | traces error code: 0
[2025-12-01 08:13:25] 2025-12-01 07:13:24,980 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-01 08:13:25] 2025-12-01 07:13:25,030 [wrapper] ==== pilot stdout END ====
[2025-12-01 08:13:25] 2025-12-01 07:13:25,033 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-01 08:13:25] 2025-12-01 07:13:25,035 [wrapper] pilotpid: 1132786
[2025-12-01 08:13:25] 2025-12-01 07:13:25,037 [wrapper] Pilot exit status: 0
[2025-12-01 08:13:25] 2025-12-01 07:13:25,044 [wrapper] pandaids: 6892527811
[2025-12-01 08:13:25] 2025-12-01 07:13:25,061 [wrapper] cleanup supervisor_pilot 1187573 1132787
[2025-12-01 08:13:25] 2025-12-01 07:13:25,063 [wrapper] Test setup, not cleaning
[2025-12-01 08:13:25] 2025-12-01 07:13:25,065 [wrapper] apfmon messages muted
[2025-12-01 08:13:25] 2025-12-01 07:13:25,068 [wrapper] ==== wrapper stdout END ====
[2025-12-01 08:13:25] 2025-12-01 07:13:25,070 [wrapper] ==== wrapper stderr END ====
[2025-12-01 08:13:25]  *** Error codes and diagnostics ***
[2025-12-01 08:13:25]     "exeErrorCode": 0,
[2025-12-01 08:13:25]     "exeErrorDiag": "",
[2025-12-01 08:13:25]     "pilotErrorCode": 0,
[2025-12-01 08:13:25]     "pilotErrorDiag": "",
[2025-12-01 08:13:25]  *** Listing of results directory ***
[2025-12-01 08:13:25] total 1301192
[2025-12-01 08:13:25] -rw-r--r-- 1 boinc boinc    576529 Nov 19 08:00 pilot3.tar.gz
[2025-12-01 08:13:25] -rw-r--r-- 1 boinc boinc      5112 Nov 19 08:09 queuedata.json
[2025-12-01 08:13:25] -rwx------ 1 boinc boinc     36292 Nov 19 08:09 runpilot2-wrapper.sh
[2025-12-01 08:13:25] -rw-r--r-- 1 boinc boinc       100 Dec  1 00:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-01 08:13:25] -rwxr-xr-x 1 boinc boinc      7986 Dec  1 00:32 run_atlas
[2025-12-01 08:13:25] -rw-r--r-- 1 boinc boinc       105 Dec  1 00:32 job.xml
[2025-12-01 08:13:25] -rw-r--r-- 2 boinc boinc 408186202 Dec  1 00:32 EVNT.47493027._000138.pool.root.1
[2025-12-01 08:13:25] -rw-r--r-- 2 boinc boinc    590097 Dec  1 00:32 input.tar.gz
[2025-12-01 08:13:25] -rw-r--r-- 2 boinc boinc     15120 Dec  1 00:32 start_atlas.sh
[2025-12-01 08:13:25] drwxrwx--x 2 boinc boinc      4096 Dec  1 00:32 shared
[2025-12-01 08:13:25] -rw-r--r-- 1 boinc boinc         0 Dec  1 00:32 boinc_setup_complete
[2025-12-01 08:13:25] -rw-r--r-- 1 boinc boinc      6449 Dec  1 00:32 init_data.xml
[2025-12-01 08:13:25] -rw-r--r-- 1 boinc boinc         0 Dec  1 00:32 boinc_lockfile
[2025-12-01 08:13:25] -rw-r--r-- 1 boinc boinc      2773 Dec  1 00:32 pandaJob.out
[2025-12-01 08:13:25] -rw------- 1 boinc boinc    993245 Dec  1 00:32 agis_schedconf.cvmfs.json
[2025-12-01 08:13:25] drwx------ 5 boinc boinc      4096 Dec  1 00:32 pilot3
[2025-12-01 08:13:25] -rw-r--r-- 1 boinc boinc       532 Dec  1 08:08 boinc_task_state.xml
[2025-12-01 08:13:25] -rw------- 1 boinc boinc 910268734 Dec  1 08:11 HITS.47493029._001335.pool.root.1
[2025-12-01 08:13:25] -rw------- 1 boinc boinc        95 Dec  1 08:12 pilot_heartbeat.json
[2025-12-01 08:13:25] -rw------- 1 boinc boinc      1032 Dec  1 08:12 memory_monitor_summary.json
[2025-12-01 08:13:25] -rw------- 1 boinc boinc   1516240 Dec  1 08:12 agis_ddmendpoints.agis.ALL.json
[2025-12-01 08:13:25] -rw------- 1 boinc boinc   1152309 Dec  1 08:12 log.47493029._001335.job.log.tgz.1
[2025-12-01 08:13:25] -rw------- 1 boinc boinc      8567 Dec  1 08:12 heartbeat.json
[2025-12-01 08:13:25] -rw-r--r-- 1 boinc boinc      8192 Dec  1 08:12 boinc_mmap_file
[2025-12-01 08:13:25] -rw-r--r-- 1 boinc boinc        28 Dec  1 08:12 wrapper_checkpoint.txt
[2025-12-01 08:13:25] -rw------- 1 boinc boinc      4742 Dec  1 08:13 pilotlog.txt
[2025-12-01 08:13:25] -rw------- 1 boinc boinc   3875589 Dec  1 08:13 log.47493029._001335.job.log.1
[2025-12-01 08:13:25] -rw------- 1 boinc boinc       353 Dec  1 08:13 output.list
[2025-12-01 08:13:25] -rw-r--r-- 1 boinc boinc       620 Dec  1 08:13 runtime_log
[2025-12-01 08:13:25] -rw------- 1 boinc boinc   5048320 Dec  1 08:13 result.tar.gz
[2025-12-01 08:13:25] -rw-r--r-- 1 boinc boinc      8798 Dec  1 08:13 runtime_log.err
[2025-12-01 08:13:25] -rw------- 1 boinc boinc       669 Dec  1 08:13 2amLDm4Urf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmcuFKDm1ojpSo.diag
[2025-12-01 08:13:25] -rw-r--r-- 1 boinc boinc      9484 Dec  1 08:13 stderr.txt
[2025-12-01 08:13:25] HITS file was successfully produced:
[2025-12-01 08:13:25] -rw------- 1 boinc boinc 910268734 Dec  1 08:11 shared/HITS.pool.root.1
[2025-12-01 08:13:25]  *** Contents of shared directory: ***
[2025-12-01 08:13:25] total 1293092
[2025-12-01 08:13:25] -rw-r--r-- 2 boinc boinc 408186202 Dec  1 00:32 ATLAS.root_0
[2025-12-01 08:13:25] -rw-r--r-- 2 boinc boinc    590097 Dec  1 00:32 input.tar.gz
[2025-12-01 08:13:25] -rw-r--r-- 2 boinc boinc     15120 Dec  1 00:32 start_atlas.sh
[2025-12-01 08:13:25] -rw------- 1 boinc boinc 910268734 Dec  1 08:11 HITS.pool.root.1
[2025-12-01 08:13:25] -rw------- 1 boinc boinc   5048320 Dec  1 08:13 result.tar.gz
08:13:26 (1129068): run_atlas exited; CPU time 81365.492057
08:13:26 (1129068): called boinc_finish(0)

</stderr_txt>
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