Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:30:39 (28840): wrapper (7.7.26015): starting
19:30:39 (28840): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 19:30:39] Arguments: --nthreads 8
[2025-11-27 19:30:39] Threads: 8
[2025-11-27 19:30:39] Checking for CVMFS
[2025-11-27 19:30:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 19:30:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 19:30:39] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 19:30:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 19:30:39] 2.11.2.0 24877 119846 147284 153391 1 81 17669066 18432001 1885 130560 0 87376027 99.975 4964273 32026 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 19:30:39] CVMFS is ok
[2025-11-27 19:30:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 19:30:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 19:30:39] Further information can be found at the LHC@home message board.
[2025-11-27 19:30:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 19:30:39] Checking for apptainer binary...
[2025-11-27 19:30:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 19:30:39] Running /usr/bin/apptainer --version
[2025-11-27 19:30:39] apptainer version 1.3.2-1.el7
[2025-11-27 19:30:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 19:30:40] c-206-3.aglt2.org
[2025-11-27 19:30:40] apptainer works
[2025-11-27 19:30:40] Set ATHENA_PROC_NUMBER=8
[2025-11-27 19:30:40] Set ATHENA_CORE_NUMBER=8
[2025-11-27 19:30:40] Starting ATLAS job with PandaID=6899498294
[2025-11-27 19:30:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 14:47:51]  *** The last 200 lines of the pilot log: ***
[2025-11-28 14:47:51] 2025-11-28 19:46:59,816 | INFO     | monitor loop #4964: job 0:6899498294 is in state 'finished'
[2025-11-28 14:47:51] 2025-11-28 19:46:59,816 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 14:47:51] 2025-11-28 19:47:00,818 | INFO     | time since job start (69369s) is within the limit (172800.0s)
[2025-11-28 14:47:51] 2025-11-28 19:47:01,735 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-28 14:47:51] 2025-11-28 19:47:01,741 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2444.6666666666665
[2025-11-28 14:47:51] 2025-11-28 19:47:01,746 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6899498294/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 14:47:51] 2025-11-28 19:47:01,747 | INFO     | extracted standard info from prmon json
[2025-11-28 14:47:51] 2025-11-28 19:47:01,747 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 14:47:51] 2025-11-28 19:47:01,747 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 14:47:51] 2025-11-28 19:47:01,777 | INFO     | fitting pss+swap vs Time
[2025-11-28 14:47:51] 2025-11-28 19:47:01,779 | INFO     | sum of square deviations: 455785879043.05164
[2025-11-28 14:47:51] 2025-11-28 19:47:01,826 | INFO     | sum of deviations: 2016737759610.2786
[2025-11-28 14:47:51] 2025-11-28 19:47:01,827 | INFO     | mean x: 1764324525.6077397
[2025-11-28 14:47:51] 2025-11-28 19:47:01,827 | INFO     | mean y: 2869299.8548812666
[2025-11-28 14:47:51] 2025-11-28 19:47:01,827 | INFO     | intersect: -7803822514.446652
[2025-11-28 14:47:51] 2025-11-28 19:47:01,829 | INFO     | chi2: 5.676738716372851
[2025-11-28 14:47:51] 2025-11-28 19:47:01,830 | INFO     | sum of square deviations: 449799503131.1991
[2025-11-28 14:47:51] 2025-11-28 19:47:01,877 | INFO     | sum of deviations: 2365778223682.0425
[2025-11-28 14:47:51] 2025-11-28 19:47:01,877 | INFO     | mean x: 1764324373.110424
[2025-11-28 14:47:51] 2025-11-28 19:47:01,877 | INFO     | mean y: 2878186.6236749114
[2025-11-28 14:47:51] 2025-11-28 19:47:01,878 | INFO     | intersect: -9276812325.170033
[2025-11-28 14:47:51] 2025-11-28 19:47:01,879 | INFO     | chi2: 2.9163812677695153
[2025-11-28 14:47:51] 2025-11-28 19:47:01,880 | INFO     | current chi2=2.9163812677695153 (change=48.62576184177566 %)
[2025-11-28 14:47:51] 2025-11-28 19:47:01,881 | INFO     | sum of square deviations: 443865779369.3257
[2025-11-28 14:47:51] 2025-11-28 19:47:01,927 | INFO     | sum of deviations: 2505256839589.241
[2025-11-28 14:47:51] 2025-11-28 19:47:01,927 | INFO     | mean x: 1764324220.6131322
[2025-11-28 14:47:51] 2025-11-28 19:47:01,927 | INFO     | mean y: 2881769.8216503994
[2025-11-28 14:47:51] 2025-11-28 19:47:01,927 | INFO     | intersect: -9955275687.652006
[2025-11-28 14:47:51] 2025-11-28 19:47:01,929 | INFO     | chi2: 2.379579099975623
[2025-11-28 14:47:51] 2025-11-28 19:47:01,929 | INFO     | current chi2=2.379579099975623 (change=18.406446843092134 %)
[2025-11-28 14:47:51] 2025-11-28 19:47:01,929 | INFO     | right removable region: 1126
[2025-11-28 14:47:51] 2025-11-28 19:47:01,931 | INFO     | sum of square deviations: 449799081621.19946
[2025-11-28 14:47:51] 2025-11-28 19:47:01,975 | INFO     | sum of deviations: 1722199499850.6233
[2025-11-28 14:47:51] 2025-11-28 19:47:01,976 | INFO     | mean x: 1764324678.110424
[2025-11-28 14:47:51] 2025-11-28 19:47:01,976 | INFO     | mean y: 2876794.0830388693
[2025-11-28 14:47:51] 2025-11-28 19:47:01,976 | INFO     | intersect: -6752403957.634431
[2025-11-28 14:47:51] 2025-11-28 19:47:01,978 | INFO     | chi2: 3.642258803094723
[2025-11-28 14:47:51] 2025-11-28 19:47:01,978 | INFO     | current chi2=3.642258803094723 (change=35.83888593304956 %)
[2025-11-28 14:47:51] 2025-11-28 19:47:01,980 | INFO     | sum of square deviations: 443865212314.2168
[2025-11-28 14:47:51] 2025-11-28 19:47:02,024 | INFO     | sum of deviations: 1647278536311.9692
[2025-11-28 14:47:51] 2025-11-28 19:47:02,024 | INFO     | mean x: 1764324830.609583
[2025-11-28 14:47:51] 2025-11-28 19:47:02,024 | INFO     | mean y: 2878719.206743567
[2025-11-28 14:47:51] 2025-11-28 19:47:02,025 | INFO     | intersect: -6544907284.099127
[2025-11-28 14:47:51] 2025-11-28 19:47:02,026 | INFO     | chi2: 3.58704900499193
[2025-11-28 14:47:51] 2025-11-28 19:47:02,026 | INFO     | current chi2=3.58704900499193 (change=1.5158120575035212 %)
[2025-11-28 14:47:51] 2025-11-28 19:47:02,027 | INFO     | left removable region: 20
[2025-11-28 14:47:51] 2025-11-28 19:47:02,028 | INFO     | sum of square deviations: 419512714318.71967
[2025-11-28 14:47:51] 2025-11-28 19:47:02,071 | INFO     | sum of deviations: 2056945742647.672
[2025-11-28 14:47:51] 2025-11-28 19:47:02,071 | INFO     | mean x: 1764324800.1175406
[2025-11-28 14:47:51] 2025-11-28 19:47:02,071 | INFO     | mean y: 2894538.2179023507
[2025-11-28 14:47:51] 2025-11-28 19:47:02,071 | INFO     | intersect: -8647904978.414387
[2025-11-28 14:47:51] 2025-11-28 19:47:02,073 | INFO     | chi2: 0.19219331221798724
[2025-11-28 14:47:51] 2025-11-28 19:47:02,073 | INFO     | current memory leak: 4.90 B/s (using 1106 data points, chi2=0.19)
[2025-11-28 14:47:51] 2025-11-28 19:47:02,075 | INFO     | could have reported an average CPU frequency of 2633 MHz (41 samples)
[2025-11-28 14:47:51] 2025-11-28 19:47:02,075 | INFO     | ..............................
[2025-11-28 14:47:51] 2025-11-28 19:47:02,075 | INFO     | . Timing measurements:
[2025-11-28 14:47:51] 2025-11-28 19:47:02,075 | INFO     | . get job = 0 s
[2025-11-28 14:47:51] 2025-11-28 19:47:02,075 | INFO     | . initial setup = 2 s
[2025-11-28 14:47:51] 2025-11-28 19:47:02,076 | INFO     | . payload setup = 5 s
[2025-11-28 14:47:51] 2025-11-28 19:47:02,076 | INFO     | . stage-in = 0 s
[2025-11-28 14:47:51] 2025-11-28 19:47:02,076 | INFO     | . payload execution = 69331 s
[2025-11-28 14:47:51] 2025-11-28 19:47:02,076 | INFO     | . stage-out = 4 s
[2025-11-28 14:47:51] 2025-11-28 19:47:02,076 | INFO     | . log creation = 0 s
[2025-11-28 14:47:51] 2025-11-28 19:47:02,076 | INFO     | ..............................
[2025-11-28 14:47:51] 2025-11-28 19:47:02,393 | INFO     | 
[2025-11-28 14:47:51] 2025-11-28 19:47:02,393 | INFO     | job summary report
[2025-11-28 14:47:51] 2025-11-28 19:47:02,393 | INFO     | --------------------------------------------------
[2025-11-28 14:47:51] 2025-11-28 19:47:02,394 | INFO     | PanDA job id: 6899498294
[2025-11-28 14:47:51] 2025-11-28 19:47:02,394 | INFO     | task id: 47556173
[2025-11-28 14:47:51] 2025-11-28 19:47:02,394 | INFO     | errors: (none)
[2025-11-28 14:47:51] 2025-11-28 19:47:02,394 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 14:47:51] 2025-11-28 19:47:02,394 | INFO     | pilot state: finished 
[2025-11-28 14:47:51] 2025-11-28 19:47:02,394 | INFO     | transexitcode: 0
[2025-11-28 14:47:51] 2025-11-28 19:47:02,395 | INFO     | exeerrorcode: 0
[2025-11-28 14:47:51] 2025-11-28 19:47:02,395 | INFO     | exeerrordiag: 
[2025-11-28 14:47:51] 2025-11-28 19:47:02,395 | INFO     | exitcode: 0
[2025-11-28 14:47:51] 2025-11-28 19:47:02,395 | INFO     | exitmsg: OK
[2025-11-28 14:47:51] 2025-11-28 19:47:02,395 | INFO     | cpuconsumptiontime: 538541 s
[2025-11-28 14:47:51] 2025-11-28 19:47:02,395 | INFO     | nevents: 1000
[2025-11-28 14:47:51] 2025-11-28 19:47:02,396 | INFO     | neventsw: 0
[2025-11-28 14:47:51] 2025-11-28 19:47:02,396 | INFO     | pid: 6727
[2025-11-28 14:47:51] 2025-11-28 19:47:02,396 | INFO     | pgrp: 6727
[2025-11-28 14:47:51] 2025-11-28 19:47:02,396 | INFO     | corecount: 8
[2025-11-28 14:47:51] 2025-11-28 19:47:02,396 | INFO     | event service: False
[2025-11-28 14:47:51] 2025-11-28 19:47:02,396 | INFO     | sizes: {0: 2284145, 1: 2284344, 4: 2284606, 12: 2284634, 69340: 2340891, 69341: 2340890, 69346: 2350068, 69349: 2350124, 69355: 2350466}
[2025-11-28 14:47:51] 2025-11-28 19:47:02,397 | INFO     | --------------------------------------------------
[2025-11-28 14:47:51] 2025-11-28 19:47:02,397 | INFO     | 
[2025-11-28 14:47:51] 2025-11-28 19:47:02,397 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-28 14:47:51] 2025-11-28 19:47:02,471 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 14:47:51] 2025-11-28 19:47:02,471 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 14:47:51] 2025-11-28 19:47:02,471 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 14:47:51] 2025-11-28 19:47:02,471 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 14:47:51] 2025-11-28 19:47:02,472 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 14:47:51] 2025-11-28 19:47:02,472 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 14:47:51] 2025-11-28 19:47:02,472 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 14:47:51] 2025-11-28 19:47:02,472 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 14:47:51] 2025-11-28 19:47:02,472 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 14:47:51] 2025-11-28 19:47:02,472 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 14:47:51] 2025-11-28 19:47:02,473 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 14:47:51] 2025-11-28 19:47:02,473 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 14:47:51] 2025-11-28 19:47:02,473 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 14:47:51] 2025-11-28 19:47:02,473 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 14:47:51] 2025-11-28 19:47:02,473 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 14:47:51] 2025-11-28 19:47:02,474 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 14:47:51] 2025-11-28 19:47:02,474 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 14:47:51] 2025-11-28 19:47:02,474 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 14:47:51] 2025-11-28 19:47:02,474 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 14:47:51] 2025-11-28 19:47:02,474 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 14:47:51] 2025-11-28 19:47:02,475 | INFO     | job 6899498294 has completed (purged errors)
[2025-11-28 14:47:51] 2025-11-28 19:47:02,475 | INFO     | overall cleanup function is called
[2025-11-28 14:47:51] 2025-11-28 19:47:03,491 | INFO     | --- collectZombieJob: --- 10, [6727]
[2025-11-28 14:47:51] 2025-11-28 19:47:03,491 | INFO     | zombie collector waiting for pid 6727
[2025-11-28 14:47:51] 2025-11-28 19:47:03,492 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 14:47:51] 2025-11-28 19:47:03,492 | INFO     | collected zombie processes
[2025-11-28 14:47:51] 2025-11-28 19:47:03,492 | INFO     | will attempt to kill all subprocesses of pid=6727
[2025-11-28 14:47:51] 2025-11-28 19:47:03,656 | INFO     | process IDs to be killed: [6727] (in reverse order)
[2025-11-28 14:47:51] 2025-11-28 19:47:03,716 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 14:47:51] 2025-11-28 19:47:03,717 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 14:47:51] 2025-11-28 19:47:03,720 | INFO     | did not find any defunct processes belonging to 6727
[2025-11-28 14:47:51] 2025-11-28 19:47:03,722 | INFO     | did not find any defunct processes belonging to 6727
[2025-11-28 14:47:51] 2025-11-28 19:47:03,723 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 14:47:51] 2025-11-28 19:47:03,723 | INFO     | ready for new job
[2025-11-28 14:47:51] 2025-11-28 19:47:03,723 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 14:47:51] 2025-11-28 19:47:03,727 | INFO     | ***************************************
[2025-11-28 14:47:51] 2025-11-28 19:47:03,727 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 14:47:51] 2025-11-28 19:47:03,728 | INFO     | ***************************************
[2025-11-28 14:47:51] 2025-11-28 19:47:03,728 | INFO     | 
[2025-11-28 14:47:51] 2025-11-28 19:47:03,728 | INFO     | architecture information:
[2025-11-28 14:47:51] 2025-11-28 19:47:03,729 | INFO     | executing command: cat /etc/os-release
[2025-11-28 14:47:51] 2025-11-28 19:47:03,740 | INFO     | cat /etc/os-release:
[2025-11-28 14:47:51] NAME="CentOS Linux"
[2025-11-28 14:47:51] VERSION="7 (Core)"
[2025-11-28 14:47:51] ID="centos"
[2025-11-28 14:47:51] ID_LIKE="rhel fedora"
[2025-11-28 14:47:51] VERSION_ID="7"
[2025-11-28 14:47:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 14:47:51] ANSI_COLOR="0;31"
[2025-11-28 14:47:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 14:47:51] HOME_URL="https://www.centos.org/"
[2025-11-28 14:47:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 14:47:51] 
[2025-11-28 14:47:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 14:47:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 14:47:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 14:47:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 14:47:51] 
[2025-11-28 14:47:51] 2025-11-28 19:47:03,741 | INFO     | ***************************************
[2025-11-28 14:47:51] 2025-11-28 19:47:04,244 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-28 14:47:51] 2025-11-28 19:47:04,258 | INFO     | sufficient remaining disk space (25287458816 B)
[2025-11-28 14:47:51] 2025-11-28 19:47:04,258 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 14:47:51] 2025-11-28 19:47:04,259 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 14:47:51] 2025-11-28 19:47:04,259 | INFO     | update_server=False
[2025-11-28 14:47:51] 2025-11-28 19:47:04,259 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 14:47:51] 2025-11-28 19:47:04,259 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 14:47:51] 2025-11-28 19:47:04,260 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 14:47:51] 2025-11-28 19:47:04,260 | INFO     | aborting loop
[2025-11-28 14:47:51] 2025-11-28 19:47:04,802 | INFO     | all payload control threads have been joined
[2025-11-28 14:47:51] 2025-11-28 19:47:05,009 | INFO     | all data control threads have been joined
[2025-11-28 14:47:51] 2025-11-28 19:47:05,264 | INFO     | [job] retrieve thread has finished
[2025-11-28 14:47:51] 2025-11-28 19:47:05,266 | INFO     | [job] job monitor thread has finished
[2025-11-28 14:47:51] 2025-11-28 19:47:05,282 | INFO     | all job control threads have been joined
[2025-11-28 14:47:51] 2025-11-28 19:47:05,399 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 14:47:51] 2025-11-28 19:47:05,421 | INFO     | [payload] failed_post thread has finished
[2025-11-28 14:47:51] 2025-11-28 19:47:05,790 | INFO     | [job] validate thread has finished
[2025-11-28 14:47:51] 2025-11-28 19:47:05,809 | INFO     | [payload] control thread has finished
[2025-11-28 14:47:51] 2025-11-28 19:47:05,810 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 14:47:51] 2025-11-28 19:47:06,015 | INFO     | [data] control thread has finished
[2025-11-28 14:47:51] 2025-11-28 19:47:06,135 | INFO     | [payload] validate_post thread has finished
[2025-11-28 14:47:51] 2025-11-28 19:47:06,265 | INFO     | [data] copytool_out thread has finished
[2025-11-28 14:47:51] 2025-11-28 19:47:06,287 | INFO     | [job] control thread has finished
[2025-11-28 14:47:51] 2025-11-28 19:47:06,373 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 14:47:51] 2025-11-28 19:47:06,643 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 14:47:51] 2025-11-28 19:47:06,697 | INFO     | [data] copytool_in thread has finished
[2025-11-28 14:47:51] 2025-11-28 19:47:06,783 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 14:47:51] 2025-11-28 19:47:07,174 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 14:47:51] 2025-11-28 19:47:08,180 | INFO     | [job] queue monitor thread has finished
[2025-11-28 14:47:51] 2025-11-28 19:47:10,788 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 14:47:51] 2025-11-28 19:47:34,053 | INFO     | PID=32546 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-28 14:47:51] 2025-11-28 19:47:34,053 | INFO     | .. there are 3 such processes running
[2025-11-28 14:47:51] 2025-11-28 19:47:34,054 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 14:47:51] 2025-11-28 19:47:34,054 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 14:47:51] 2025-11-28 19:47:34,054 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 14:47:51] 2025-11-28 19:47:45,894 | INFO     | [monitor] cgroup control has ended
[2025-11-28 14:47:51] 2025-11-28 19:47:46,177 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140120435451712)>', '<ExcThread(monitor, started 140119994517248)>']
[2025-11-28 14:47:51] 2025-11-28 19:47:47,125 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 14:47:51] 2025-11-28 19:47:47,125 | INFO     | [monitor] control thread has ended
[2025-11-28 14:47:51] 2025-11-28 19:47:51,203 | INFO     | all workflow threads have been joined
[2025-11-28 14:47:51] 2025-11-28 19:47:51,203 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 14:47:51] 2025-11-28 19:47:51,204 | INFO     | traces error code: 0
[2025-11-28 14:47:51] 2025-11-28 19:47:51,204 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 14:47:51] 2025-11-28 19:47:51,333 [wrapper] ==== pilot stdout END ====
[2025-11-28 14:47:51] 2025-11-28 19:47:51,336 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 14:47:51] 2025-11-28 19:47:51,338 [wrapper] pilotpid: 32546
[2025-11-28 14:47:51] 2025-11-28 19:47:51,341 [wrapper] Pilot exit status: 0
[2025-11-28 14:47:51] 2025-11-28 19:47:51,350 [wrapper] pandaids: 6899498294
[2025-11-28 14:47:51] 2025-11-28 19:47:51,393 [wrapper] cleanup supervisor_pilot 23204 32547
[2025-11-28 14:47:51] 2025-11-28 19:47:51,395 [wrapper] Test setup, not cleaning
[2025-11-28 14:47:51] 2025-11-28 19:47:51,398 [wrapper] apfmon messages muted
[2025-11-28 14:47:51] 2025-11-28 19:47:51,400 [wrapper] ==== wrapper stdout END ====
[2025-11-28 14:47:51] 2025-11-28 19:47:51,402 [wrapper] ==== wrapper stderr END ====
[2025-11-28 14:47:51]  *** Error codes and diagnostics ***
[2025-11-28 14:47:51]     "exeErrorCode": 0,
[2025-11-28 14:47:51]     "exeErrorDiag": "",
[2025-11-28 14:47:51]     "pilotErrorCode": 0,
[2025-11-28 14:47:51]     "pilotErrorDiag": "",
[2025-11-28 14:47:51]  *** Listing of results directory ***
[2025-11-28 14:47:51] total 1323972
[2025-11-28 14:47:51] -rw-r--r-- 1 boincer umatlas    576529 Nov 27 03:46 pilot3.tar.gz
[2025-11-28 14:47:51] -rwx------ 1 boincer umatlas     36292 Nov 27 03:46 runpilot2-wrapper.sh
[2025-11-28 14:47:51] -rw-r--r-- 1 boincer umatlas      5112 Nov 27 03:46 queuedata.json
[2025-11-28 14:47:51] -rw-r--r-- 1 boincer umatlas       100 Nov 27 19:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 14:47:51] -rwxr-xr-x 1 boincer umatlas      7986 Nov 27 19:30 run_atlas
[2025-11-28 14:47:51] -rw-r--r-- 1 boincer umatlas       105 Nov 27 19:30 job.xml
[2025-11-28 14:47:51] -rw-r--r-- 2 boincer umatlas 411115870 Nov 27 19:30 EVNT.47483658._003355.pool.root.1
[2025-11-28 14:47:51] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 19:30 start_atlas.sh
[2025-11-28 14:47:51] drwxrwx--x 2 boincer umatlas      4096 Nov 27 19:30 shared
[2025-11-28 14:47:51] -rw-r--r-- 2 boincer umatlas    590100 Nov 27 19:30 input.tar.gz
[2025-11-28 14:47:51] -rw-r--r-- 1 boincer umatlas         0 Nov 27 19:30 boinc_lockfile
[2025-11-28 14:47:51] -rw-r--r-- 1 boincer umatlas      2787 Nov 27 19:30 pandaJob.out
[2025-11-28 14:47:51] -rw------- 1 boincer umatlas        57 Nov 27 19:30 setup.sh.local
[2025-11-28 14:47:51] -rw------- 1 boincer umatlas    991826 Nov 27 19:30 agis_schedconf.cvmfs.json
[2025-11-28 14:47:51] drwx------ 5 boincer umatlas      4096 Nov 27 19:30 pilot3
[2025-11-28 14:47:51] -rw-r--r-- 1 boincer umatlas       533 Nov 28 14:34 boinc_task_state.xml
[2025-11-28 14:47:51] -rw------- 1 boincer umatlas 916922105 Nov 28 14:46 HITS.47556173._003117.pool.root.1
[2025-11-28 14:47:51] -rw------- 1 boincer umatlas        95 Nov 28 14:46 pilot_heartbeat.json
[2025-11-28 14:47:51] -rw------- 1 boincer umatlas      1067 Nov 28 14:46 memory_monitor_summary.json
[2025-11-28 14:47:51] -rw------- 1 boincer umatlas   1516240 Nov 28 14:46 agis_ddmendpoints.agis.ALL.json
[2025-11-28 14:47:51] -rw------- 1 boincer umatlas   2300500 Nov 28 14:46 log.47556173._003117.job.log.tgz.1
[2025-11-28 14:47:51] -rw------- 1 boincer umatlas      8659 Nov 28 14:47 heartbeat.json
[2025-11-28 14:47:51] -rw-r--r-- 1 boincer umatlas      5953 Nov 28 14:47 init_data.xml
[2025-11-28 14:47:51] -rw-r--r-- 1 boincer umatlas      8192 Nov 28 14:47 boinc_mmap_file
[2025-11-28 14:47:51] -rw-r--r-- 1 boincer umatlas        29 Nov 28 14:47 wrapper_checkpoint.txt
[2025-11-28 14:47:51] -rw------- 1 boincer umatlas      4821 Nov 28 14:47 pilotlog.txt
[2025-11-28 14:47:51] -rw------- 1 boincer umatlas   9593821 Nov 28 14:47 log.47556173._003117.job.log.1
[2025-11-28 14:47:51] -rw------- 1 boincer umatlas       353 Nov 28 14:47 output.list
[2025-11-28 14:47:51] -rw-r--r-- 1 boincer umatlas       620 Nov 28 14:47 runtime_log
[2025-11-28 14:47:51] -rw------- 1 boincer umatlas  11909120 Nov 28 14:47 result.tar.gz
[2025-11-28 14:47:51] -rw-r--r-- 1 boincer umatlas      9338 Nov 28 14:47 runtime_log.err
[2025-11-28 14:47:51] -rw------- 1 boincer umatlas       667 Nov 28 14:47 OovNDm3omi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmXkNKDmsecgfn.diag
[2025-11-28 14:47:51] -rw-r--r-- 1 boincer umatlas     21315 Nov 28 14:47 stderr.txt
[2025-11-28 14:47:51] HITS file was successfully produced:
[2025-11-28 14:47:51] -rw------- 1 boincer umatlas 916922105 Nov 28 14:46 shared/HITS.pool.root.1
[2025-11-28 14:47:51]  *** Contents of shared directory: ***
[2025-11-28 14:47:51] total 1309152
[2025-11-28 14:47:51] -rw-r--r-- 2 boincer umatlas 411115870 Nov 27 19:30 ATLAS.root_0
[2025-11-28 14:47:51] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 19:30 start_atlas.sh
[2025-11-28 14:47:51] -rw-r--r-- 2 boincer umatlas    590100 Nov 27 19:30 input.tar.gz
[2025-11-28 14:47:51] -rw------- 1 boincer umatlas 916922105 Nov 28 14:46 HITS.pool.root.1
[2025-11-28 14:47:51] -rw------- 1 boincer umatlas  11909120 Nov 28 14:47 result.tar.gz
14:47:53 (28840): run_atlas exited; CPU time 537747.868271
14:47:53 (28840): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN