Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:21:13 (2174659): wrapper (7.7.26015): starting
08:21:13 (2174659): wrapper: running run_atlas (--nthreads 6)
[2025-11-28 08:21:13] Arguments: --nthreads 6
[2025-11-28 08:21:13] Threads: 6
[2025-11-28 08:21:13] Checking for CVMFS
[2025-11-28 08:21:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 08:21:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 08:21:13] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 08:21:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 08:21:13] 2.13.3.0 1581104 4059 93240 153400 0 81 22408396 81920001 0 130560 0 2126143 99.984 164023 1871 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://147.213.204.101:3128 1
[2025-11-28 08:21:13] CVMFS is ok
[2025-11-28 08:21:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-28 08:21:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-28 08:21:13] Further information can be found at the LHC@home message board.
[2025-11-28 08:21:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 08:21:13] Checking for apptainer binary...
[2025-11-28 08:21:13] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/var/lib/snapd/snap/bin)
[2025-11-28 08:21:13] apptainer is not installed, using version from CVMFS
[2025-11-28 08:21:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 08:21:13] monitor-atlas.iep
[2025-11-28 08:21:13] apptainer works
[2025-11-28 08:21:13] Set ATHENA_PROC_NUMBER=6
[2025-11-28 08:21:13] Set ATHENA_CORE_NUMBER=6
[2025-11-28 08:21:13] Starting ATLAS job with PandaID=6898120848
[2025-11-28 08:21:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 13:09:56]  *** The last 200 lines of the pilot log: ***
[2025-11-28 13:09:56] 2025-11-28 12:09:05,462 | INFO     | PID=2178368 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 13:09:56] 2025-11-28 12:09:06,462 | INFO     | time since job start (17265s) is within the limit (172800.0s)
[2025-11-28 13:09:56] 2025-11-28 12:09:06,681 | INFO     | monitor loop #1308: job 0:6898120848 is in state 'finished'
[2025-11-28 13:09:56] 2025-11-28 12:09:06,681 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 13:09:56] 2025-11-28 12:09:07,121 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 13:09:56] 2025-11-28 12:09:07,121 | INFO     | found 6 cores (6 cores per socket, 1 socket) , CPU MHz: 4372.972333333332
[2025-11-28 13:09:56] 2025-11-28 12:09:07,122 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6898120848/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 13:09:56] 2025-11-28 12:09:07,122 | INFO     | extracted standard info from prmon json
[2025-11-28 13:09:56] 2025-11-28 12:09:07,122 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 13:09:56] 2025-11-28 12:09:07,122 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 13:09:56] 2025-11-28 12:09:07,124 | INFO     | fitting pss+swap vs Time
[2025-11-28 13:09:56] 2025-11-28 12:09:07,124 | INFO     | sum of square deviations: 7028008982.0
[2025-11-28 13:09:56] 2025-11-28 12:09:07,125 | INFO     | sum of deviations: 143430142532.0
[2025-11-28 13:09:56] 2025-11-28 12:09:07,125 | INFO     | mean x: 1764323104.0
[2025-11-28 13:09:56] 2025-11-28 12:09:07,125 | INFO     | mean y: 2690692.7137809186
[2025-11-28 13:09:56] 2025-11-28 12:09:07,125 | INFO     | intersect: -36004251661.42174
[2025-11-28 13:09:56] 2025-11-28 12:09:07,125 | INFO     | chi2: 2.5556218859453566
[2025-11-28 13:09:56] 2025-11-28 12:09:07,125 | INFO     | sum of square deviations: 6662039329.5
[2025-11-28 13:09:56] 2025-11-28 12:09:07,126 | INFO     | sum of deviations: 182243617049.5
[2025-11-28 13:09:56] 2025-11-28 12:09:07,126 | INFO     | mean x: 1764322951.5
[2025-11-28 13:09:56] 2025-11-28 12:09:07,126 | INFO     | mean y: 2706720.348920863
[2025-11-28 13:09:56] 2025-11-28 12:09:07,126 | INFO     | intersect: -48261282791.2443
[2025-11-28 13:09:56] 2025-11-28 12:09:07,126 | INFO     | chi2: 1.3738319317039815
[2025-11-28 13:09:56] 2025-11-28 12:09:07,127 | INFO     | current chi2=1.3738319317039815 (change=46.242754483385404 %)
[2025-11-28 13:09:56] 2025-11-28 12:09:07,127 | INFO     | sum of square deviations: 6309000152.0
[2025-11-28 13:09:56] 2025-11-28 12:09:07,127 | INFO     | sum of deviations: 175868040247.0
[2025-11-28 13:09:56] 2025-11-28 12:09:07,127 | INFO     | mean x: 1764322799.0
[2025-11-28 13:09:56] 2025-11-28 12:09:07,127 | INFO     | mean y: 2703966.5018315017
[2025-11-28 13:09:56] 2025-11-28 12:09:07,127 | INFO     | intersect: -49179097515.12725
[2025-11-28 13:09:56] 2025-11-28 12:09:07,128 | INFO     | chi2: 1.3722064789742672
[2025-11-28 13:09:56] 2025-11-28 12:09:07,128 | INFO     | current chi2=1.3722064789742672 (change=0.11831525328562582 %)
[2025-11-28 13:09:56] 2025-11-28 12:09:07,128 | INFO     | right removable region: 272
[2025-11-28 13:09:56] 2025-11-28 12:09:07,128 | INFO     | sum of square deviations: 6662039329.5
[2025-11-28 13:09:56] 2025-11-28 12:09:07,129 | INFO     | sum of deviations: 99235128393.50002
[2025-11-28 13:09:56] 2025-11-28 12:09:07,129 | INFO     | mean x: 1764323256.5
[2025-11-28 13:09:56] 2025-11-28 12:09:07,129 | INFO     | mean y: 2708950.6726618707
[2025-11-28 13:09:56] 2025-11-28 12:09:07,129 | INFO     | intersect: -26277959209.170803
[2025-11-28 13:09:56] 2025-11-28 12:09:07,129 | INFO     | chi2: 1.2380786190793092
[2025-11-28 13:09:56] 2025-11-28 12:09:07,129 | INFO     | current chi2=1.2380786190793092 (change=51.554702755985815 %)
[2025-11-28 13:09:56] 2025-11-28 12:09:07,129 | INFO     | sum of square deviations: 6309000152.0
[2025-11-28 13:09:56] 2025-11-28 12:09:07,130 | INFO     | sum of deviations: 94590182896.00002
[2025-11-28 13:09:56] 2025-11-28 12:09:07,130 | INFO     | mean x: 1764323409.0
[2025-11-28 13:09:56] 2025-11-28 12:09:07,130 | INFO     | mean y: 2710952.5934065934
[2025-11-28 13:09:56] 2025-11-28 12:09:07,130 | INFO     | intersect: -26449606359.85738
[2025-11-28 13:09:56] 2025-11-28 12:09:07,130 | INFO     | chi2: 1.2369355096914068
[2025-11-28 13:09:56] 2025-11-28 12:09:07,130 | INFO     | current chi2=1.2369355096914068 (change=0.09232930528696759 %)
[2025-11-28 13:09:56] 2025-11-28 12:09:07,130 | INFO     | left removable region: 20
[2025-11-28 13:09:56] 2025-11-28 12:09:07,130 | INFO     | sum of square deviations: 4962187923.0
[2025-11-28 13:09:56] 2025-11-28 12:09:07,131 | INFO     | sum of deviations: 110941466038.0
[2025-11-28 13:09:56] 2025-11-28 12:09:07,131 | INFO     | mean x: 1764323378.5
[2025-11-28 13:09:56] 2025-11-28 12:09:07,131 | INFO     | mean y: 2732770.4285714286
[2025-11-28 13:09:56] 2025-11-28 12:09:07,131 | INFO     | intersect: -39442895894.43067
[2025-11-28 13:09:56] 2025-11-28 12:09:07,131 | INFO     | chi2: 0.024201465099399633
[2025-11-28 13:09:56] 2025-11-28 12:09:07,131 | INFO     | current memory leak: 22.36 B/s (using 252 data points, chi2=0.02)
[2025-11-28 13:09:56] 2025-11-28 12:09:07,131 | INFO     | could have reported an average CPU frequency of 4314 MHz (13 samples)
[2025-11-28 13:09:56] 2025-11-28 12:09:07,131 | INFO     | ..............................
[2025-11-28 13:09:56] 2025-11-28 12:09:07,131 | INFO     | . Timing measurements:
[2025-11-28 13:09:56] 2025-11-28 12:09:07,131 | INFO     | . get job = 0 s
[2025-11-28 13:09:56] 2025-11-28 12:09:07,131 | INFO     | . initial setup = 1 s
[2025-11-28 13:09:56] 2025-11-28 12:09:07,131 | INFO     | . payload setup = 5 s
[2025-11-28 13:09:56] 2025-11-28 12:09:07,131 | INFO     | . stage-in = 0 s
[2025-11-28 13:09:56] 2025-11-28 12:09:07,132 | INFO     | . payload execution = 17231 s
[2025-11-28 13:09:56] 2025-11-28 12:09:07,132 | INFO     | . stage-out = 1 s
[2025-11-28 13:09:56] 2025-11-28 12:09:07,132 | INFO     | . log creation = 0 s
[2025-11-28 13:09:56] 2025-11-28 12:09:07,132 | INFO     | ..............................
[2025-11-28 13:09:56] 2025-11-28 12:09:07,645 | INFO     | 
[2025-11-28 13:09:56] 2025-11-28 12:09:07,646 | INFO     | job summary report
[2025-11-28 13:09:56] 2025-11-28 12:09:07,646 | INFO     | --------------------------------------------------
[2025-11-28 13:09:56] 2025-11-28 12:09:07,646 | INFO     | PanDA job id: 6898120848
[2025-11-28 13:09:56] 2025-11-28 12:09:07,646 | INFO     | task id: 47556161
[2025-11-28 13:09:56] 2025-11-28 12:09:07,646 | INFO     | errors: (none)
[2025-11-28 13:09:56] 2025-11-28 12:09:07,647 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 13:09:56] 2025-11-28 12:09:07,647 | INFO     | pilot state: finished 
[2025-11-28 13:09:56] 2025-11-28 12:09:07,647 | INFO     | transexitcode: 0
[2025-11-28 13:09:56] 2025-11-28 12:09:07,647 | INFO     | exeerrorcode: 0
[2025-11-28 13:09:56] 2025-11-28 12:09:07,647 | INFO     | exeerrordiag: 
[2025-11-28 13:09:56] 2025-11-28 12:09:07,647 | INFO     | exitcode: 0
[2025-11-28 13:09:56] 2025-11-28 12:09:07,648 | INFO     | exitmsg: OK
[2025-11-28 13:09:56] 2025-11-28 12:09:07,648 | INFO     | cpuconsumptiontime: 101281 s
[2025-11-28 13:09:56] 2025-11-28 12:09:07,648 | INFO     | nevents: 1000
[2025-11-28 13:09:56] 2025-11-28 12:09:07,648 | INFO     | neventsw: 0
[2025-11-28 13:09:56] 2025-11-28 12:09:07,648 | INFO     | pid: 2184938
[2025-11-28 13:09:56] 2025-11-28 12:09:07,649 | INFO     | pgrp: 2184938
[2025-11-28 13:09:56] 2025-11-28 12:09:07,649 | INFO     | corecount: 6
[2025-11-28 13:09:56] 2025-11-28 12:09:07,649 | INFO     | event service: False
[2025-11-28 13:09:56] 2025-11-28 12:09:07,649 | INFO     | sizes: {0: 2284264, 4: 2284526, 11: 2284554, 17240: 2317791, 17243: 2326785, 17245: 2326841, 17252: 2327215}
[2025-11-28 13:09:56] 2025-11-28 12:09:07,649 | INFO     | --------------------------------------------------
[2025-11-28 13:09:56] 2025-11-28 12:09:07,649 | INFO     | 
[2025-11-28 13:09:56] 2025-11-28 12:09:07,650 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-11-28 13:09:56] 2025-11-28 12:09:07,659 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 13:09:56] 2025-11-28 12:09:07,660 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 13:09:56] 2025-11-28 12:09:07,660 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 13:09:56] 2025-11-28 12:09:07,660 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 13:09:56] 2025-11-28 12:09:07,660 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 13:09:56] 2025-11-28 12:09:07,660 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 13:09:56] 2025-11-28 12:09:07,660 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 13:09:56] 2025-11-28 12:09:07,660 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 13:09:56] 2025-11-28 12:09:07,660 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 13:09:56] 2025-11-28 12:09:07,660 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 13:09:56] 2025-11-28 12:09:07,660 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 13:09:56] 2025-11-28 12:09:07,660 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 13:09:56] 2025-11-28 12:09:07,660 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 13:09:56] 2025-11-28 12:09:07,660 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 13:09:56] 2025-11-28 12:09:07,660 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 13:09:56] 2025-11-28 12:09:07,660 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 13:09:56] 2025-11-28 12:09:07,660 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 13:09:56] 2025-11-28 12:09:07,660 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 13:09:56] 2025-11-28 12:09:07,660 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 13:09:56] 2025-11-28 12:09:07,660 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 13:09:56] 2025-11-28 12:09:07,660 | INFO     | job 6898120848 has completed (purged errors)
[2025-11-28 13:09:56] 2025-11-28 12:09:07,660 | INFO     | overall cleanup function is called
[2025-11-28 13:09:56] 2025-11-28 12:09:08,668 | INFO     | --- collectZombieJob: --- 10, [2184938]
[2025-11-28 13:09:56] 2025-11-28 12:09:08,668 | INFO     | zombie collector waiting for pid 2184938
[2025-11-28 13:09:56] 2025-11-28 12:09:08,669 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 13:09:56] 2025-11-28 12:09:08,669 | INFO     | collected zombie processes
[2025-11-28 13:09:56] 2025-11-28 12:09:08,669 | INFO     | will attempt to kill all subprocesses of pid=2184938
[2025-11-28 13:09:56] 2025-11-28 12:09:08,705 | INFO     | process IDs to be killed: [2184938] (in reverse order)
[2025-11-28 13:09:56] 2025-11-28 12:09:08,722 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 13:09:56] 2025-11-28 12:09:08,722 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 13:09:56] 2025-11-28 12:09:08,723 | INFO     | did not find any defunct processes belonging to 2184938
[2025-11-28 13:09:56] 2025-11-28 12:09:08,724 | INFO     | did not find any defunct processes belonging to 2184938
[2025-11-28 13:09:56] 2025-11-28 12:09:08,724 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 13:09:56] 2025-11-28 12:09:08,724 | INFO     | ready for new job
[2025-11-28 13:09:56] 2025-11-28 12:09:08,724 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 13:09:56] 2025-11-28 12:09:08,725 | INFO     | ***************************************
[2025-11-28 13:09:56] 2025-11-28 12:09:08,725 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 13:09:56] 2025-11-28 12:09:08,725 | INFO     | ***************************************
[2025-11-28 13:09:56] 2025-11-28 12:09:08,725 | INFO     | 
[2025-11-28 13:09:56] 2025-11-28 12:09:08,725 | INFO     | architecture information:
[2025-11-28 13:09:56] 2025-11-28 12:09:08,725 | INFO     | executing command: cat /etc/os-release
[2025-11-28 13:09:56] 2025-11-28 12:09:08,731 | INFO     | cat /etc/os-release:
[2025-11-28 13:09:56] NAME="CentOS Linux"
[2025-11-28 13:09:56] VERSION="7 (Core)"
[2025-11-28 13:09:56] ID="centos"
[2025-11-28 13:09:56] ID_LIKE="rhel fedora"
[2025-11-28 13:09:56] VERSION_ID="7"
[2025-11-28 13:09:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 13:09:56] ANSI_COLOR="0;31"
[2025-11-28 13:09:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 13:09:56] HOME_URL="https://www.centos.org/"
[2025-11-28 13:09:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 13:09:56] 
[2025-11-28 13:09:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 13:09:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 13:09:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 13:09:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 13:09:56] 
[2025-11-28 13:09:56] 2025-11-28 12:09:08,731 | INFO     | ***************************************
[2025-11-28 13:09:56] 2025-11-28 12:09:09,234 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-11-28 13:09:56] 2025-11-28 12:09:09,244 | INFO     | sufficient remaining disk space (869600854016 B)
[2025-11-28 13:09:56] 2025-11-28 12:09:09,244 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 13:09:56] 2025-11-28 12:09:09,244 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 13:09:56] 2025-11-28 12:09:09,244 | INFO     | update_server=False
[2025-11-28 13:09:56] 2025-11-28 12:09:09,244 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 13:09:56] 2025-11-28 12:09:09,244 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 13:09:56] 2025-11-28 12:09:09,721 | INFO     | all data control threads have been joined
[2025-11-28 13:09:56] 2025-11-28 12:09:09,776 | INFO     | all job control threads have been joined
[2025-11-28 13:09:56] 2025-11-28 12:09:10,189 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 13:09:56] 2025-11-28 12:09:10,190 | INFO     | aborting loop
[2025-11-28 13:09:56] 2025-11-28 12:09:10,250 | INFO     | [job] retrieve thread has finished
[2025-11-28 13:09:56] 2025-11-28 12:09:10,316 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 13:09:56] 2025-11-28 12:09:10,353 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 13:09:56] 2025-11-28 12:09:10,704 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 13:09:56] 2025-11-28 12:09:10,712 | INFO     | all payload control threads have been joined
[2025-11-28 13:09:56] 2025-11-28 12:09:10,727 | INFO     | [data] control thread has finished
[2025-11-28 13:09:56] 2025-11-28 12:09:10,752 | INFO     | [data] copytool_in thread has finished
[2025-11-28 13:09:56] 2025-11-28 12:09:10,782 | INFO     | [job] control thread has finished
[2025-11-28 13:09:56] 2025-11-28 12:09:11,195 | INFO     | [job] job monitor thread has finished
[2025-11-28 13:09:56] 2025-11-28 12:09:11,250 | INFO     | [data] copytool_out thread has finished
[2025-11-28 13:09:56] 2025-11-28 12:09:11,251 | INFO     | [payload] validate_post thread has finished
[2025-11-28 13:09:56] 2025-11-28 12:09:11,367 | INFO     | [payload] failed_post thread has finished
[2025-11-28 13:09:56] 2025-11-28 12:09:11,592 | INFO     | [job] validate thread has finished
[2025-11-28 13:09:56] 2025-11-28 12:09:11,615 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 13:09:56] 2025-11-28 12:09:11,646 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 13:09:56] 2025-11-28 12:09:11,717 | INFO     | [payload] control thread has finished
[2025-11-28 13:09:56] 2025-11-28 12:09:12,172 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 13:09:56] 2025-11-28 12:09:13,178 | INFO     | [job] queue monitor thread has finished
[2025-11-28 13:09:56] 2025-11-28 12:09:14,710 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 13:09:56] 2025-11-28 12:09:39,596 | INFO     | PID=2178368 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 13:09:56] 2025-11-28 12:09:39,596 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 13:09:56] 2025-11-28 12:09:39,596 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 13:09:56] 2025-11-28 12:09:39,596 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 13:09:56] 2025-11-28 12:09:49,698 | INFO     | [monitor] cgroup control has ended
[2025-11-28 13:09:56] 2025-11-28 12:09:51,618 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139635214931776)>', '<ExcThread(monitor, started 139634512209664)>']
[2025-11-28 13:09:56] 2025-11-28 12:09:51,651 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 13:09:56] 2025-11-28 12:09:51,651 | INFO     | [monitor] control thread has ended
[2025-11-28 13:09:56] 2025-11-28 12:09:56,643 | INFO     | all workflow threads have been joined
[2025-11-28 13:09:56] 2025-11-28 12:09:56,644 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 13:09:56] 2025-11-28 12:09:56,644 | INFO     | traces error code: 0
[2025-11-28 13:09:56] 2025-11-28 12:09:56,644 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 13:09:56] 2025-11-28 12:09:56,691 [wrapper] ==== pilot stdout END ====
[2025-11-28 13:09:56] 2025-11-28 12:09:56,692 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 13:09:56] 2025-11-28 12:09:56,693 [wrapper] pilotpid: 2178368
[2025-11-28 13:09:56] 2025-11-28 12:09:56,694 [wrapper] Pilot exit status: 0
[2025-11-28 13:09:56] 2025-11-28 12:09:56,697 [wrapper] pandaids: 6898120848
[2025-11-28 13:09:56] 2025-11-28 12:09:56,707 [wrapper] cleanup supervisor_pilot 2215249 2178369
[2025-11-28 13:09:56] 2025-11-28 12:09:56,708 [wrapper] Test setup, not cleaning
[2025-11-28 13:09:56] 2025-11-28 12:09:56,709 [wrapper] apfmon messages muted
[2025-11-28 13:09:56] 2025-11-28 12:09:56,710 [wrapper] ==== wrapper stdout END ====
[2025-11-28 13:09:56] 2025-11-28 12:09:56,710 [wrapper] ==== wrapper stderr END ====
[2025-11-28 13:09:56]  *** Error codes and diagnostics ***
[2025-11-28 13:09:56]     "exeErrorCode": 0,
[2025-11-28 13:09:56]     "exeErrorDiag": "",
[2025-11-28 13:09:56]     "pilotErrorCode": 0,
[2025-11-28 13:09:56]     "pilotErrorDiag": "",
[2025-11-28 13:09:56]  *** Listing of results directory ***
[2025-11-28 13:09:56] total 1327716
[2025-11-28 13:09:56] -rw-r--r-- 1 boinc boinc    576529 Nov 26 04:33 pilot3.tar.gz
[2025-11-28 13:09:56] -rw-r--r-- 1 boinc boinc      5112 Nov 26 04:46 queuedata.json
[2025-11-28 13:09:56] -rwx------ 1 boinc boinc     36292 Nov 26 04:50 runpilot2-wrapper.sh
[2025-11-28 13:09:56] -rw-r--r-- 1 boinc boinc       100 Nov 28 08:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 13:09:56] -rwxr-xr-x 1 boinc boinc      7986 Nov 28 08:21 run_atlas
[2025-11-28 13:09:56] -rw-r--r-- 1 boinc boinc       105 Nov 28 08:21 job.xml
[2025-11-28 13:09:56] -rw-r--r-- 2 boinc boinc     15847 Nov 28 08:21 start_atlas.sh
[2025-11-28 13:09:56] drwxrwx--x 2 boinc boinc        68 Nov 28 08:21 shared
[2025-11-28 13:09:56] -rw-r--r-- 2 boinc boinc    590110 Nov 28 08:21 input.tar.gz
[2025-11-28 13:09:56] -rw-r--r-- 1 boinc boinc      6551 Nov 28 08:21 init_data.xml
[2025-11-28 13:09:56] -rw-r--r-- 2 boinc boinc 410392685 Nov 28 08:21 EVNT.47483658._002447.pool.root.1
[2025-11-28 13:09:56] -rw-r--r-- 1 boinc boinc         0 Nov 28 08:21 boinc_lockfile
[2025-11-28 13:09:56] -rw-r--r-- 1 boinc boinc      2785 Nov 28 08:21 pandaJob.out
[2025-11-28 13:09:56] -rw------- 1 boinc boinc    991866 Nov 28 08:21 agis_schedconf.cvmfs.json
[2025-11-28 13:09:56] drwx------ 5 boinc boinc      4096 Nov 28 08:21 pilot3
[2025-11-28 13:09:56] -rw-r--r-- 1 boinc boinc       532 Nov 28 13:05 boinc_task_state.xml
[2025-11-28 13:09:56] -rw------- 1 boinc boinc 937642452 Nov 28 13:08 HITS.47556161._004293.pool.root.1
[2025-11-28 13:09:56] -rw------- 1 boinc boinc        95 Nov 28 13:08 pilot_heartbeat.json
[2025-11-28 13:09:56] -rw------- 1 boinc boinc      1031 Nov 28 13:08 memory_monitor_summary.json
[2025-11-28 13:09:56] -rw------- 1 boinc boinc   1516240 Nov 28 13:08 agis_ddmendpoints.agis.ALL.json
[2025-11-28 13:09:56] -rw------- 1 boinc boinc   1368571 Nov 28 13:08 log.47556161._004293.job.log.tgz.1
[2025-11-28 13:09:56] -rw------- 1 boinc boinc      8604 Nov 28 13:09 heartbeat.json
[2025-11-28 13:09:56] -rw-r--r-- 1 boinc boinc      8192 Nov 28 13:09 boinc_mmap_file
[2025-11-28 13:09:56] -rw-r--r-- 1 boinc boinc        29 Nov 28 13:09 wrapper_checkpoint.txt
[2025-11-28 13:09:56] -rw------- 1 boinc boinc      4749 Nov 28 13:09 pilotlog.txt
[2025-11-28 13:09:56] -rw------- 1 boinc boinc   2451602 Nov 28 13:09 log.47556161._004293.job.log.1
[2025-11-28 13:09:56] -rw------- 1 boinc boinc       353 Nov 28 13:09 output.list
[2025-11-28 13:09:56] -rw-r--r-- 1 boinc boinc       620 Nov 28 13:09 runtime_log
[2025-11-28 13:09:56] -rw------- 1 boinc boinc   3840000 Nov 28 13:09 result.tar.gz
[2025-11-28 13:09:56] -rw------- 1 boinc boinc       663 Nov 28 13:09 uhTNDmniLi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmyrMKDmcG3yKn.diag
[2025-11-28 13:09:56] -rw-r--r-- 1 boinc boinc      8831 Nov 28 13:09 runtime_log.err
[2025-11-28 13:09:56] -rw-r--r-- 1 boinc boinc     21500 Nov 28 13:09 stderr.txt
[2025-11-28 13:09:56] HITS file was successfully produced:
[2025-11-28 13:09:56] -rw------- 1 boinc boinc 937642452 Nov 28 13:08 shared/HITS.pool.root.1
[2025-11-28 13:09:56]  *** Contents of shared directory: ***
[2025-11-28 13:09:56] total 1320792
[2025-11-28 13:09:56] -rw-r--r-- 2 boinc boinc     15847 Nov 28 08:21 start_atlas.sh
[2025-11-28 13:09:56] -rw-r--r-- 2 boinc boinc    590110 Nov 28 08:21 input.tar.gz
[2025-11-28 13:09:56] -rw-r--r-- 2 boinc boinc 410392685 Nov 28 08:21 ATLAS.root_0
[2025-11-28 13:09:56] -rw------- 1 boinc boinc 937642452 Nov 28 13:08 HITS.pool.root.1
[2025-11-28 13:09:56] -rw------- 1 boinc boinc   3840000 Nov 28 13:09 result.tar.gz
13:09:58 (2174659): run_atlas exited; CPU time 101287.342716
13:09:58 (2174659): called boinc_finish(0)

</stderr_txt>
]]>

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