Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:35:47 (3580): wrapper (7.7.26015): starting
14:35:47 (3580): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 14:35:47] Arguments: --nthreads 8
[2025-11-27 14:35:47] Threads: 8
[2025-11-27 14:35:47] Checking for CVMFS
[2025-11-27 14:35:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 14:35:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 14:35:47] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 14:35:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 14:35:47] 2.11.2.0 2783 83837 81720 153383 3 71 10492854 20275200 1 130560 0 27456804 99.899 4526563 30215 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 14:35:47] CVMFS is ok
[2025-11-27 14:35:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 14:35:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 14:35:47] Further information can be found at the LHC@home message board.
[2025-11-27 14:35:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 14:35:47] Checking for apptainer binary...
[2025-11-27 14:35:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 14:35:47] Running /usr/bin/apptainer --version
[2025-11-27 14:35:47] apptainer version 1.3.2-1.el7
[2025-11-27 14:35:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 14:35:49] c-204-38.aglt2.org
[2025-11-27 14:35:49] apptainer works
[2025-11-27 14:35:49] Set ATHENA_PROC_NUMBER=8
[2025-11-27 14:35:49] Set ATHENA_CORE_NUMBER=8
[2025-11-27 14:35:49] Starting ATLAS job with PandaID=6898378295
[2025-11-27 14:35:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 03:30:49]  *** The last 200 lines of the pilot log: ***
[2025-11-28 03:30:49] 2025-11-28 08:30:13,919 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 03:30:49] 2025-11-28 08:30:15,528 | INFO     | time since job start (46449s) is within the limit (172800.0s)
[2025-11-28 03:30:49] 2025-11-28 08:30:16,422 | INFO     | monitor loop #3418: job 0:6898378295 is in state 'finished'
[2025-11-28 03:30:49] 2025-11-28 08:30:16,422 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 03:30:49] 2025-11-28 08:30:17,027 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-28 03:30:49] 2025-11-28 08:30:17,031 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-11-28 03:30:49] 2025-11-28 08:30:17,033 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6898378295/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 03:30:49] 2025-11-28 08:30:17,035 | INFO     | extracted standard info from prmon json
[2025-11-28 03:30:49] 2025-11-28 08:30:17,035 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 03:30:49] 2025-11-28 08:30:17,035 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 03:30:49] 2025-11-28 08:30:17,049 | INFO     | fitting pss+swap vs Time
[2025-11-28 03:30:49] 2025-11-28 08:30:17,050 | INFO     | sum of square deviations: 136656346177.71861
[2025-11-28 03:30:49] 2025-11-28 08:30:17,061 | INFO     | sum of deviations: 859689323745.8032
[2025-11-28 03:30:49] 2025-11-28 08:30:17,061 | INFO     | mean x: 1764295378.5926414
[2025-11-28 03:30:49] 2025-11-28 08:30:17,062 | INFO     | mean y: 2875740.3219448095
[2025-11-28 03:30:49] 2025-11-28 08:30:17,062 | INFO     | intersect: -11096103146.012823
[2025-11-28 03:30:49] 2025-11-28 08:30:17,063 | INFO     | chi2: 5.148432813687234
[2025-11-28 03:30:49] 2025-11-28 08:30:17,063 | INFO     | sum of square deviations: 133980507975.95082
[2025-11-28 03:30:49] 2025-11-28 08:30:17,075 | INFO     | sum of deviations: 1085830639655.8607
[2025-11-28 03:30:49] 2025-11-28 08:30:17,075 | INFO     | mean x: 1764295226.096561
[2025-11-28 03:30:49] 2025-11-28 08:30:17,075 | INFO     | mean y: 2888622.9470899473
[2025-11-28 03:30:49] 2025-11-28 08:30:17,075 | INFO     | intersect: -14295652581.554674
[2025-11-28 03:30:49] 2025-11-28 08:30:17,076 | INFO     | chi2: 2.5894566927607614
[2025-11-28 03:30:49] 2025-11-28 08:30:17,076 | INFO     | current chi2=2.5894566927607614 (change=49.703982037473075 %)
[2025-11-28 03:30:49] 2025-11-28 08:30:17,077 | INFO     | sum of square deviations: 131339833224.16116
[2025-11-28 03:30:49] 2025-11-28 08:30:17,089 | INFO     | sum of deviations: 1157708339404.4106
[2025-11-28 03:30:49] 2025-11-28 08:30:17,089 | INFO     | mean x: 1764295073.6005325
[2025-11-28 03:30:49] 2025-11-28 08:30:17,089 | INFO     | mean y: 2892767.4713715045
[2025-11-28 03:30:49] 2025-11-28 08:30:17,089 | INFO     | intersect: -15548665885.655586
[2025-11-28 03:30:49] 2025-11-28 08:30:17,090 | INFO     | chi2: 2.199448549237775
[2025-11-28 03:30:49] 2025-11-28 08:30:17,090 | INFO     | current chi2=2.199448549237775 (change=15.061388924298916 %)
[2025-11-28 03:30:49] 2025-11-28 08:30:17,090 | INFO     | right removable region: 750
[2025-11-28 03:30:49] 2025-11-28 08:30:17,091 | INFO     | sum of square deviations: 133980232865.95073
[2025-11-28 03:30:49] 2025-11-28 08:30:17,103 | INFO     | sum of deviations: 659913559049.5394
[2025-11-28 03:30:49] 2025-11-28 08:30:17,103 | INFO     | mean x: 1764295531.096561
[2025-11-28 03:30:49] 2025-11-28 08:30:17,104 | INFO     | mean y: 2887106.746031746
[2025-11-28 03:30:49] 2025-11-28 08:30:17,104 | INFO     | intersect: -8687070495.477362
[2025-11-28 03:30:49] 2025-11-28 08:30:17,104 | INFO     | chi2: 3.0936374075506854
[2025-11-28 03:30:49] 2025-11-28 08:30:17,105 | INFO     | current chi2=3.0936374075506854 (change=39.91108518836693 %)
[2025-11-28 03:30:49] 2025-11-28 08:30:17,105 | INFO     | sum of square deviations: 131339375236.55672
[2025-11-28 03:30:49] 2025-11-28 08:30:17,117 | INFO     | sum of deviations: 615098278802.5981
[2025-11-28 03:30:49] 2025-11-28 08:30:17,118 | INFO     | mean x: 1764295683.5978694
[2025-11-28 03:30:49] 2025-11-28 08:30:17,118 | INFO     | mean y: 2889693.624500666
[2025-11-28 03:30:49] 2025-11-28 08:30:17,118 | INFO     | intersect: -8259790377.186787
[2025-11-28 03:30:49] 2025-11-28 08:30:17,119 | INFO     | chi2: 3.0497375973301386
[2025-11-28 03:30:49] 2025-11-28 08:30:17,119 | INFO     | current chi2=3.0497375973301386 (change=1.4190354083965977 %)
[2025-11-28 03:30:49] 2025-11-28 08:30:17,119 | INFO     | left removable region: 20
[2025-11-28 03:30:49] 2025-11-28 08:30:17,120 | INFO     | sum of square deviations: 120627044114.878
[2025-11-28 03:30:49] 2025-11-28 08:30:17,133 | INFO     | sum of deviations: 862711186259.9661
[2025-11-28 03:30:49] 2025-11-28 08:30:17,133 | INFO     | mean x: 1764295653.1054795
[2025-11-28 03:30:49] 2025-11-28 08:30:17,134 | INFO     | mean y: 2910315.208219178
[2025-11-28 03:30:49] 2025-11-28 08:30:17,134 | INFO     | intersect: -12615135720.591131
[2025-11-28 03:30:49] 2025-11-28 08:30:17,135 | INFO     | chi2: 0.07234027084552062
[2025-11-28 03:30:49] 2025-11-28 08:30:17,135 | INFO     | current memory leak: 7.15 B/s (using 730 data points, chi2=0.07)
[2025-11-28 03:30:49] 2025-11-28 08:30:17,135 | INFO     | could have reported an average CPU frequency of 2179 MHz (29 samples)
[2025-11-28 03:30:49] 2025-11-28 08:30:17,136 | INFO     | ..............................
[2025-11-28 03:30:49] 2025-11-28 08:30:17,136 | INFO     | . Timing measurements:
[2025-11-28 03:30:49] 2025-11-28 08:30:17,136 | INFO     | . get job = 0 s
[2025-11-28 03:30:49] 2025-11-28 08:30:17,136 | INFO     | . initial setup = 2 s
[2025-11-28 03:30:49] 2025-11-28 08:30:17,136 | INFO     | . payload setup = 8 s
[2025-11-28 03:30:49] 2025-11-28 08:30:17,136 | INFO     | . stage-in = 0 s
[2025-11-28 03:30:49] 2025-11-28 08:30:17,136 | INFO     | . payload execution = 46408 s
[2025-11-28 03:30:49] 2025-11-28 08:30:17,136 | INFO     | . stage-out = 3 s
[2025-11-28 03:30:49] 2025-11-28 08:30:17,137 | INFO     | . log creation = 0 s
[2025-11-28 03:30:49] 2025-11-28 08:30:17,137 | INFO     | ..............................
[2025-11-28 03:30:49] 2025-11-28 08:30:17,427 | INFO     | 
[2025-11-28 03:30:49] 2025-11-28 08:30:17,428 | INFO     | job summary report
[2025-11-28 03:30:49] 2025-11-28 08:30:17,428 | INFO     | --------------------------------------------------
[2025-11-28 03:30:49] 2025-11-28 08:30:17,428 | INFO     | PanDA job id: 6898378295
[2025-11-28 03:30:49] 2025-11-28 08:30:17,428 | INFO     | task id: 47556161
[2025-11-28 03:30:49] 2025-11-28 08:30:17,429 | INFO     | errors: (none)
[2025-11-28 03:30:49] 2025-11-28 08:30:17,429 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 03:30:49] 2025-11-28 08:30:17,429 | INFO     | pilot state: finished 
[2025-11-28 03:30:49] 2025-11-28 08:30:17,429 | INFO     | transexitcode: 0
[2025-11-28 03:30:49] 2025-11-28 08:30:17,429 | INFO     | exeerrorcode: 0
[2025-11-28 03:30:49] 2025-11-28 08:30:17,429 | INFO     | exeerrordiag: 
[2025-11-28 03:30:49] 2025-11-28 08:30:17,430 | INFO     | exitcode: 0
[2025-11-28 03:30:49] 2025-11-28 08:30:17,430 | INFO     | exitmsg: OK
[2025-11-28 03:30:49] 2025-11-28 08:30:17,430 | INFO     | cpuconsumptiontime: 357565 s
[2025-11-28 03:30:49] 2025-11-28 08:30:17,430 | INFO     | nevents: 1000
[2025-11-28 03:30:49] 2025-11-28 08:30:17,430 | INFO     | neventsw: 0
[2025-11-28 03:30:49] 2025-11-28 08:30:17,431 | INFO     | pid: 14846
[2025-11-28 03:30:49] 2025-11-28 08:30:17,431 | INFO     | pgrp: 14846
[2025-11-28 03:30:49] 2025-11-28 08:30:17,431 | INFO     | corecount: 8
[2025-11-28 03:30:49] 2025-11-28 08:30:17,431 | INFO     | event service: False
[2025-11-28 03:30:49] 2025-11-28 08:30:17,431 | INFO     | sizes: {0: 2284145, 1: 2284344, 6: 2284606, 11: 2284634, 46421: 2331116, 46426: 2340294, 46433: 2340484}
[2025-11-28 03:30:49] 2025-11-28 08:30:17,431 | INFO     | --------------------------------------------------
[2025-11-28 03:30:49] 2025-11-28 08:30:17,432 | INFO     | 
[2025-11-28 03:30:49] 2025-11-28 08:30:17,432 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-28 03:30:49] 2025-11-28 08:30:17,462 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 03:30:49] 2025-11-28 08:30:17,463 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 03:30:49] 2025-11-28 08:30:17,463 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 03:30:49] 2025-11-28 08:30:17,463 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 03:30:49] 2025-11-28 08:30:17,464 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 03:30:49] 2025-11-28 08:30:17,464 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 03:30:49] 2025-11-28 08:30:17,464 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 03:30:49] 2025-11-28 08:30:17,464 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 03:30:49] 2025-11-28 08:30:17,465 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 03:30:49] 2025-11-28 08:30:17,465 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 03:30:49] 2025-11-28 08:30:17,465 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 03:30:49] 2025-11-28 08:30:17,465 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 03:30:49] 2025-11-28 08:30:17,465 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 03:30:49] 2025-11-28 08:30:17,466 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 03:30:49] 2025-11-28 08:30:17,466 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 03:30:49] 2025-11-28 08:30:17,466 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 03:30:49] 2025-11-28 08:30:17,466 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 03:30:49] 2025-11-28 08:30:17,467 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 03:30:49] 2025-11-28 08:30:17,467 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 03:30:49] 2025-11-28 08:30:17,467 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 03:30:49] 2025-11-28 08:30:17,467 | INFO     | job 6898378295 has completed (purged errors)
[2025-11-28 03:30:49] 2025-11-28 08:30:17,468 | INFO     | overall cleanup function is called
[2025-11-28 03:30:49] 2025-11-28 08:30:18,484 | INFO     | --- collectZombieJob: --- 10, [14846]
[2025-11-28 03:30:49] 2025-11-28 08:30:18,484 | INFO     | zombie collector waiting for pid 14846
[2025-11-28 03:30:49] 2025-11-28 08:30:18,484 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 03:30:49] 2025-11-28 08:30:18,484 | INFO     | collected zombie processes
[2025-11-28 03:30:49] 2025-11-28 08:30:18,485 | INFO     | will attempt to kill all subprocesses of pid=14846
[2025-11-28 03:30:49] 2025-11-28 08:30:18,581 | INFO     | process IDs to be killed: [14846] (in reverse order)
[2025-11-28 03:30:49] 2025-11-28 08:30:18,635 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 03:30:49] 2025-11-28 08:30:18,636 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 03:30:49] 2025-11-28 08:30:18,643 | INFO     | did not find any defunct processes belonging to 14846
[2025-11-28 03:30:49] 2025-11-28 08:30:18,647 | INFO     | did not find any defunct processes belonging to 14846
[2025-11-28 03:30:49] 2025-11-28 08:30:18,649 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 03:30:49] 2025-11-28 08:30:18,649 | INFO     | ready for new job
[2025-11-28 03:30:49] 2025-11-28 08:30:18,649 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 03:30:49] 2025-11-28 08:30:18,653 | INFO     | ***************************************
[2025-11-28 03:30:49] 2025-11-28 08:30:18,653 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 03:30:49] 2025-11-28 08:30:18,653 | INFO     | ***************************************
[2025-11-28 03:30:49] 2025-11-28 08:30:18,653 | INFO     | 
[2025-11-28 03:30:49] 2025-11-28 08:30:18,654 | INFO     | architecture information:
[2025-11-28 03:30:49] 2025-11-28 08:30:18,654 | INFO     | executing command: cat /etc/os-release
[2025-11-28 03:30:49] 2025-11-28 08:30:18,672 | INFO     | cat /etc/os-release:
[2025-11-28 03:30:49] NAME="CentOS Linux"
[2025-11-28 03:30:49] VERSION="7 (Core)"
[2025-11-28 03:30:49] ID="centos"
[2025-11-28 03:30:49] ID_LIKE="rhel fedora"
[2025-11-28 03:30:49] VERSION_ID="7"
[2025-11-28 03:30:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 03:30:49] ANSI_COLOR="0;31"
[2025-11-28 03:30:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 03:30:49] HOME_URL="https://www.centos.org/"
[2025-11-28 03:30:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 03:30:49] 
[2025-11-28 03:30:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 03:30:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 03:30:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 03:30:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 03:30:49] 
[2025-11-28 03:30:49] 2025-11-28 08:30:18,673 | INFO     | ***************************************
[2025-11-28 03:30:49] 2025-11-28 08:30:19,176 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-28 03:30:49] 2025-11-28 08:30:19,196 | INFO     | sufficient remaining disk space (17424187392 B)
[2025-11-28 03:30:49] 2025-11-28 08:30:19,197 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 03:30:49] 2025-11-28 08:30:19,197 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 03:30:49] 2025-11-28 08:30:19,198 | INFO     | update_server=False
[2025-11-28 03:30:49] 2025-11-28 08:30:19,198 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 03:30:49] 2025-11-28 08:30:19,198 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 03:30:49] 2025-11-28 08:30:19,739 | INFO     | all job control threads have been joined
[2025-11-28 03:30:49] 2025-11-28 08:30:19,843 | INFO     | all data control threads have been joined
[2025-11-28 03:30:49] 2025-11-28 08:30:19,931 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 03:30:49] 2025-11-28 08:30:19,931 | INFO     | aborting loop
[2025-11-28 03:30:49] 2025-11-28 08:30:19,940 | INFO     | all payload control threads have been joined
[2025-11-28 03:30:49] 2025-11-28 08:30:20,203 | INFO     | [job] retrieve thread has finished
[2025-11-28 03:30:49] 2025-11-28 08:30:20,204 | INFO     | [job] queue monitor thread has finished
[2025-11-28 03:30:49] 2025-11-28 08:30:20,311 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 03:30:49] 2025-11-28 08:30:20,398 | INFO     | [data] copytool_in thread has finished
[2025-11-28 03:30:49] 2025-11-28 08:30:20,443 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 03:30:49] 2025-11-28 08:30:20,521 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 03:30:49] 2025-11-28 08:30:20,605 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 03:30:49] 2025-11-28 08:30:20,625 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 03:30:49] 2025-11-28 08:30:20,670 | INFO     | [payload] validate_post thread has finished
[2025-11-28 03:30:49] 2025-11-28 08:30:20,745 | INFO     | [job] control thread has finished
[2025-11-28 03:30:49] 2025-11-28 08:30:20,846 | INFO     | [data] control thread has finished
[2025-11-28 03:30:49] 2025-11-28 08:30:20,877 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 03:30:49] 2025-11-28 08:30:20,937 | INFO     | [job] job monitor thread has finished
[2025-11-28 03:30:49] 2025-11-28 08:30:20,943 | INFO     | [job] validate thread has finished
[2025-11-28 03:30:49] 2025-11-28 08:30:20,945 | INFO     | [payload] control thread has finished
[2025-11-28 03:30:49] 2025-11-28 08:30:21,590 | INFO     | [payload] failed_post thread has finished
[2025-11-28 03:30:49] 2025-11-28 08:30:22,526 | INFO     | [data] copytool_out thread has finished
[2025-11-28 03:30:49] 2025-11-28 08:30:23,472 | INFO     | [monitor] cgroup control has ended
[2025-11-28 03:30:49] 2025-11-28 08:30:24,611 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 03:30:49] 2025-11-28 08:30:25,463 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139779399567168)>', '<ExcThread(monitor, started 139778787874560)>']
[2025-11-28 03:30:49] 2025-11-28 08:30:30,472 | INFO     | all workflow threads have been joined
[2025-11-28 03:30:49] 2025-11-28 08:30:30,473 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 03:30:49] 2025-11-28 08:30:30,480 | INFO     | traces error code: 0
[2025-11-28 03:30:49] 2025-11-28 08:30:30,481 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 03:30:49] 2025-11-28 08:30:48,752 | INFO     | PID=7799 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-28 03:30:49] 2025-11-28 08:30:48,753 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 03:30:49] 2025-11-28 08:30:48,753 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 03:30:49] 2025-11-28 08:30:48,753 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 03:30:49] 2025-11-28 08:30:48,753 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 03:30:49] 2025-11-28 08:30:48,753 | INFO     | [monitor] control thread has ended
[2025-11-28 03:30:49] 2025-11-28 08:30:48,871 [wrapper] ==== pilot stdout END ====
[2025-11-28 03:30:49] 2025-11-28 08:30:48,876 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 03:30:49] 2025-11-28 08:30:48,880 [wrapper] pilotpid: 7799
[2025-11-28 03:30:49] 2025-11-28 08:30:48,885 [wrapper] Pilot exit status: 0
[2025-11-28 03:30:49] 2025-11-28 08:30:48,901 [wrapper] pandaids: 6898378295
[2025-11-28 03:30:49] 2025-11-28 08:30:48,946 [wrapper] cleanup supervisor_pilot 29811 7800
[2025-11-28 03:30:49] 2025-11-28 08:30:48,951 [wrapper] Test setup, not cleaning
[2025-11-28 03:30:49] 2025-11-28 08:30:48,956 [wrapper] apfmon messages muted
[2025-11-28 03:30:49] 2025-11-28 08:30:48,961 [wrapper] ==== wrapper stdout END ====
[2025-11-28 03:30:49] 2025-11-28 08:30:48,965 [wrapper] ==== wrapper stderr END ====
[2025-11-28 03:30:49]  *** Error codes and diagnostics ***
[2025-11-28 03:30:49]     "exeErrorCode": 0,
[2025-11-28 03:30:49]     "exeErrorDiag": "",
[2025-11-28 03:30:49]     "pilotErrorCode": 0,
[2025-11-28 03:30:49]     "pilotErrorDiag": "",
[2025-11-28 03:30:49]  *** Listing of results directory ***
[2025-11-28 03:30:49] total 1323208
[2025-11-28 03:30:49] -rw-r--r-- 1 boincer umatlas    576529 Nov 26 11:12 pilot3.tar.gz
[2025-11-28 03:30:49] -rwx------ 1 boincer umatlas     36292 Nov 26 11:38 runpilot2-wrapper.sh
[2025-11-28 03:30:49] -rw-r--r-- 1 boincer umatlas      5112 Nov 26 11:41 queuedata.json
[2025-11-28 03:30:49] -rw-r--r-- 1 boincer umatlas       100 Nov 27 14:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 03:30:49] -rwxr-xr-x 1 boincer umatlas      7986 Nov 27 14:35 run_atlas
[2025-11-28 03:30:49] -rw-r--r-- 1 boincer umatlas       105 Nov 27 14:35 job.xml
[2025-11-28 03:30:49] -rw-r--r-- 2 boincer umatlas 412999286 Nov 27 14:35 EVNT.47483658._002601.pool.root.1
[2025-11-28 03:30:49] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 14:35 start_atlas.sh
[2025-11-28 03:30:49] drwxrwx--x 2 boincer umatlas      4096 Nov 27 14:35 shared
[2025-11-28 03:30:49] -rw-r--r-- 2 boincer umatlas    590105 Nov 27 14:35 input.tar.gz
[2025-11-28 03:30:49] -rw-r--r-- 1 boincer umatlas         0 Nov 27 14:35 boinc_lockfile
[2025-11-28 03:30:49] -rw-r--r-- 1 boincer umatlas      2787 Nov 27 14:35 pandaJob.out
[2025-11-28 03:30:49] -rw------- 1 boincer umatlas        57 Nov 27 14:35 setup.sh.local
[2025-11-28 03:30:49] -rw------- 1 boincer umatlas    991191 Nov 27 14:36 agis_schedconf.cvmfs.json
[2025-11-28 03:30:49] drwx------ 5 boincer umatlas      4096 Nov 27 14:36 pilot3
[2025-11-28 03:30:49] -rw-r--r-- 1 boincer umatlas       532 Nov 28 03:19 boinc_task_state.xml
[2025-11-28 03:30:49] -rw-r--r-- 1 boincer umatlas      5913 Nov 28 03:28 init_data.xml
[2025-11-28 03:30:49] -rw------- 1 boincer umatlas 921267608 Nov 28 03:29 HITS.47556161._005834.pool.root.1
[2025-11-28 03:30:49] -rw------- 1 boincer umatlas      1063 Nov 28 03:30 memory_monitor_summary.json
[2025-11-28 03:30:49] -rw------- 1 boincer umatlas   1516240 Nov 28 03:30 agis_ddmendpoints.agis.ALL.json
[2025-11-28 03:30:49] -rw------- 1 boincer umatlas   2000661 Nov 28 03:30 log.47556161._005834.job.log.tgz.1
[2025-11-28 03:30:49] -rw------- 1 boincer umatlas      8661 Nov 28 03:30 heartbeat.json
[2025-11-28 03:30:49] -rw-r--r-- 1 boincer umatlas      8192 Nov 28 03:30 boinc_mmap_file
[2025-11-28 03:30:49] -rw-r--r-- 1 boincer umatlas        29 Nov 28 03:30 wrapper_checkpoint.txt
[2025-11-28 03:30:49] -rw------- 1 boincer umatlas        95 Nov 28 03:30 pilot_heartbeat.json
[2025-11-28 03:30:49] -rw------- 1 boincer umatlas       744 Nov 28 03:30 pilotlog.txt
[2025-11-28 03:30:49] -rw------- 1 boincer umatlas   6392435 Nov 28 03:30 log.47556161._005834.job.log.1
[2025-11-28 03:30:49] -rw------- 1 boincer umatlas       353 Nov 28 03:30 output.list
[2025-11-28 03:30:49] -rw-r--r-- 1 boincer umatlas       620 Nov 28 03:30 runtime_log
[2025-11-28 03:30:49] -rw------- 1 boincer umatlas   8417280 Nov 28 03:30 result.tar.gz
[2025-11-28 03:30:49] -rw------- 1 boincer umatlas       668 Nov 28 03:30 saiLDmliXi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmMAKKDmXsMcnm.diag
[2025-11-28 03:30:49] -rw-r--r-- 1 boincer umatlas      9343 Nov 28 03:30 runtime_log.err
[2025-11-28 03:30:49] -rw-r--r-- 1 boincer umatlas     21317 Nov 28 03:30 stderr.txt
[2025-11-28 03:30:49] HITS file was successfully produced:
[2025-11-28 03:30:49] -rw------- 1 boincer umatlas 921267608 Nov 28 03:29 shared/HITS.pool.root.1
[2025-11-28 03:30:49]  *** Contents of shared directory: ***
[2025-11-28 03:30:49] total 1311816
[2025-11-28 03:30:49] -rw-r--r-- 2 boincer umatlas 412999286 Nov 27 14:35 ATLAS.root_0
[2025-11-28 03:30:49] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 14:35 start_atlas.sh
[2025-11-28 03:30:49] -rw-r--r-- 2 boincer umatlas    590105 Nov 27 14:35 input.tar.gz
[2025-11-28 03:30:49] -rw------- 1 boincer umatlas 921267608 Nov 28 03:29 HITS.pool.root.1
[2025-11-28 03:30:49] -rw------- 1 boincer umatlas   8417280 Nov 28 03:30 result.tar.gz
03:30:50 (3580): run_atlas exited; CPU time 353671.027348
03:30:50 (3580): called boinc_finish(0)

</stderr_txt>
]]>

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