Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:15:53 (1851188): wrapper (7.7.26015): starting
16:15:53 (1851188): wrapper: running run_atlas (--nthreads 8)
[2025-11-28 16:15:53] Arguments: --nthreads 8
[2025-11-28 16:15:53] Threads: 8
[2025-11-28 16:15:53] Checking for CVMFS
[2025-11-28 16:15:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 16:15:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 16:15:53] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 16:15:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 16:15:53] 2.13.2.0 6818 10107 79780 153408 0 81 2442084 4097024 0 130560 0 4603971 99.983 364165 12766 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-28 16:15:53] CVMFS is ok
[2025-11-28 16:15:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-28 16:15:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-28 16:15:53] Further information can be found at the LHC@home message board.
[2025-11-28 16:15:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 16:15:53] Checking for apptainer binary...
[2025-11-28 16:15:53] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-11-28 16:15:53] apptainer is not installed, using version from CVMFS
[2025-11-28 16:15:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 16:15:53] pckeatlas02
[2025-11-28 16:15:53] apptainer works
[2025-11-28 16:15:53] Set ATHENA_PROC_NUMBER=8
[2025-11-28 16:15:53] Set ATHENA_CORE_NUMBER=8
[2025-11-28 16:15:53] Starting ATLAS job with PandaID=6899115418
[2025-11-28 16:15:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 23:45:48]  *** The last 200 lines of the pilot log: ***
[2025-11-28 23:45:48] 2025-11-28 22:44:39,097 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-28 23:45:48] 2025-11-28 22:44:39,251 | INFO     | monitor loop #2029: job 0:6899115418 is in state 'finished'
[2025-11-28 23:45:48] 2025-11-28 22:44:39,251 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 23:45:48] 2025-11-28 22:44:40,095 | INFO     | time since job start (26922s) is within the limit (172800.0s)
[2025-11-28 23:45:48] 2025-11-28 22:44:41,292 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 23:45:48] 2025-11-28 22:44:41,293 | INFO     | found 4 cores (4 cores per socket, 1 socket) HT, CPU MHz: 3876.275125
[2025-11-28 23:45:48] 2025-11-28 22:44:41,294 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-6899115418/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 23:45:48] 2025-11-28 22:44:41,294 | INFO     | extracted standard info from prmon json
[2025-11-28 23:45:48] 2025-11-28 22:44:41,294 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 23:45:48] 2025-11-28 22:44:41,294 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 23:45:48] 2025-11-28 22:44:41,297 | INFO     | fitting pss+swap vs Time
[2025-11-28 23:45:48] 2025-11-28 22:44:41,298 | INFO     | sum of square deviations: 26594507940.0
[2025-11-28 23:45:48] 2025-11-28 22:44:41,300 | INFO     | sum of deviations: 294708248481.99994
[2025-11-28 23:45:48] 2025-11-28 22:44:41,300 | INFO     | mean x: 1764356397.0
[2025-11-28 23:45:48] 2025-11-28 22:44:41,300 | INFO     | mean y: 3038720.3038548753
[2025-11-28 23:45:48] 2025-11-28 22:44:41,300 | INFO     | intersect: -19548756884.67556
[2025-11-28 23:45:48] 2025-11-28 22:44:41,300 | INFO     | chi2: 2.0330278884646993
[2025-11-28 23:45:48] 2025-11-28 22:44:41,300 | INFO     | sum of square deviations: 25700146985.0
[2025-11-28 23:45:48] 2025-11-28 22:44:41,302 | INFO     | sum of deviations: 336553119921.0
[2025-11-28 23:45:48] 2025-11-28 22:44:41,302 | INFO     | mean x: 1764356244.5
[2025-11-28 23:45:48] 2025-11-28 22:44:41,302 | INFO     | mean y: 3045797.3073394494
[2025-11-28 23:45:48] 2025-11-28 22:44:41,302 | INFO     | intersect: -23101864812.15911
[2025-11-28 23:45:48] 2025-11-28 22:44:41,302 | INFO     | chi2: 1.386678533900594
[2025-11-28 23:45:48] 2025-11-28 22:44:41,303 | INFO     | current chi2=1.386678533900594 (change=31.79244899843528 %)
[2025-11-28 23:45:48] 2025-11-28 22:44:41,303 | INFO     | sum of square deviations: 24826065480.0
[2025-11-28 23:45:48] 2025-11-28 22:44:41,305 | INFO     | sum of deviations: 328260443323.00006
[2025-11-28 23:45:48] 2025-11-28 22:44:41,305 | INFO     | mean x: 1764356092.0
[2025-11-28 23:45:48] 2025-11-28 22:44:41,305 | INFO     | mean y: 3044350.4524361948
[2025-11-28 23:45:48] 2025-11-28 22:44:41,305 | INFO     | intersect: -23325997192.845547
[2025-11-28 23:45:48] 2025-11-28 22:44:41,305 | INFO     | chi2: 1.3863415939508084
[2025-11-28 23:45:48] 2025-11-28 22:44:41,305 | INFO     | current chi2=1.3863415939508084 (change=0.024298346123372606 %)
[2025-11-28 23:45:48] 2025-11-28 22:44:41,305 | INFO     | right removable region: 430
[2025-11-28 23:45:48] 2025-11-28 22:44:41,305 | INFO     | sum of square deviations: 25700146985.0
[2025-11-28 23:45:48] 2025-11-28 22:44:41,307 | INFO     | sum of deviations: 213164064399.0
[2025-11-28 23:45:48] 2025-11-28 22:44:41,307 | INFO     | mean x: 1764356549.5
[2025-11-28 23:45:48] 2025-11-28 22:44:41,307 | INFO     | mean y: 3052558.4770642202
[2025-11-28 23:45:48] 2025-11-28 22:44:41,307 | INFO     | intersect: -14631004334.657682
[2025-11-28 23:45:48] 2025-11-28 22:44:41,308 | INFO     | chi2: 0.7274962020304152
[2025-11-28 23:45:48] 2025-11-28 22:44:41,308 | INFO     | current chi2=0.7274962020304152 (change=64.21612285014913 %)
[2025-11-28 23:45:48] 2025-11-28 22:44:41,308 | INFO     | sum of square deviations: 24826065480.0
[2025-11-28 23:45:48] 2025-11-28 22:44:41,310 | INFO     | sum of deviations: 195186662776.99997
[2025-11-28 23:45:48] 2025-11-28 22:44:41,310 | INFO     | mean x: 1764356702.0
[2025-11-28 23:45:48] 2025-11-28 22:44:41,310 | INFO     | mean y: 3055693.299303944
[2025-11-28 23:45:48] 2025-11-28 22:44:41,310 | INFO     | intersect: -13868610636.149765
[2025-11-28 23:45:48] 2025-11-28 22:44:41,310 | INFO     | chi2: 0.7130751233952037
[2025-11-28 23:45:48] 2025-11-28 22:44:41,310 | INFO     | current chi2=0.7130751233952037 (change=1.9822891988937905 %)
[2025-11-28 23:45:48] 2025-11-28 22:44:41,310 | INFO     | left removable region: 20
[2025-11-28 23:45:48] 2025-11-28 22:44:41,310 | INFO     | sum of square deviations: 21371126282.5
[2025-11-28 23:45:48] 2025-11-28 22:44:41,312 | INFO     | sum of deviations: 202502075149.99997
[2025-11-28 23:45:48] 2025-11-28 22:44:41,312 | INFO     | mean x: 1764356671.5
[2025-11-28 23:45:48] 2025-11-28 22:44:41,312 | INFO     | mean y: 3066619.673170732
[2025-11-28 23:45:48] 2025-11-28 22:44:41,312 | INFO     | intersect: -16715092384.23785
[2025-11-28 23:45:48] 2025-11-28 22:44:41,312 | INFO     | chi2: 0.05478772711078676
[2025-11-28 23:45:48] 2025-11-28 22:44:41,313 | INFO     | current memory leak: 9.48 B/s (using 410 data points, chi2=0.05)
[2025-11-28 23:45:48] 2025-11-28 22:44:41,313 | INFO     | could have reported an average CPU frequency of 3781 MHz (18 samples)
[2025-11-28 23:45:48] 2025-11-28 22:44:41,313 | INFO     | ..............................
[2025-11-28 23:45:48] 2025-11-28 22:44:41,313 | INFO     | . Timing measurements:
[2025-11-28 23:45:48] 2025-11-28 22:44:41,313 | INFO     | . get job = 0 s
[2025-11-28 23:45:48] 2025-11-28 22:44:41,313 | INFO     | . initial setup = 0 s
[2025-11-28 23:45:48] 2025-11-28 22:44:41,313 | INFO     | . payload setup = 3 s
[2025-11-28 23:45:48] 2025-11-28 22:44:41,313 | INFO     | . stage-in = 0 s
[2025-11-28 23:45:48] 2025-11-28 22:44:41,313 | INFO     | . payload execution = 26899 s
[2025-11-28 23:45:48] 2025-11-28 22:44:41,313 | INFO     | . stage-out = 0 s
[2025-11-28 23:45:48] 2025-11-28 22:44:41,313 | INFO     | . log creation = 0 s
[2025-11-28 23:45:48] 2025-11-28 22:44:41,313 | INFO     | ..............................
[2025-11-28 23:45:48] 2025-11-28 22:44:41,348 | INFO     | 
[2025-11-28 23:45:48] 2025-11-28 22:44:41,348 | INFO     | job summary report
[2025-11-28 23:45:48] 2025-11-28 22:44:41,348 | INFO     | --------------------------------------------------
[2025-11-28 23:45:48] 2025-11-28 22:44:41,348 | INFO     | PanDA job id: 6899115418
[2025-11-28 23:45:48] 2025-11-28 22:44:41,348 | INFO     | task id: 47556185
[2025-11-28 23:45:48] 2025-11-28 22:44:41,348 | INFO     | errors: (none)
[2025-11-28 23:45:48] 2025-11-28 22:44:41,349 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 23:45:48] 2025-11-28 22:44:41,349 | INFO     | pilot state: finished 
[2025-11-28 23:45:48] 2025-11-28 22:44:41,349 | INFO     | transexitcode: 0
[2025-11-28 23:45:48] 2025-11-28 22:44:41,349 | INFO     | exeerrorcode: 0
[2025-11-28 23:45:48] 2025-11-28 22:44:41,349 | INFO     | exeerrordiag: 
[2025-11-28 23:45:48] 2025-11-28 22:44:41,349 | INFO     | exitcode: 0
[2025-11-28 23:45:48] 2025-11-28 22:44:41,349 | INFO     | exitmsg: OK
[2025-11-28 23:45:48] 2025-11-28 22:44:41,349 | INFO     | cpuconsumptiontime: 210183 s
[2025-11-28 23:45:48] 2025-11-28 22:44:41,349 | INFO     | nevents: 1000
[2025-11-28 23:45:48] 2025-11-28 22:44:41,349 | INFO     | neventsw: 0
[2025-11-28 23:45:48] 2025-11-28 22:44:41,349 | INFO     | pid: 1862261
[2025-11-28 23:45:48] 2025-11-28 22:44:41,349 | INFO     | pgrp: 1862261
[2025-11-28 23:45:48] 2025-11-28 22:44:41,349 | INFO     | corecount: 8
[2025-11-28 23:45:48] 2025-11-28 22:44:41,349 | INFO     | event service: False
[2025-11-28 23:45:48] 2025-11-28 22:44:41,349 | INFO     | sizes: {0: 2284315, 2: 2284577, 10: 2284605, 26907: 2322394, 26908: 2331390, 26909: 2331446, 26911: 2331820}
[2025-11-28 23:45:48] 2025-11-28 22:44:41,349 | INFO     | --------------------------------------------------
[2025-11-28 23:45:48] 2025-11-28 22:44:41,349 | INFO     | 
[2025-11-28 23:45:48] 2025-11-28 22:44:41,349 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-11-28 23:45:48] 2025-11-28 22:44:41,358 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 23:45:48] 2025-11-28 22:44:41,358 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 23:45:48] 2025-11-28 22:44:41,358 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 23:45:48] 2025-11-28 22:44:41,358 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 23:45:48] 2025-11-28 22:44:41,358 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 23:45:48] 2025-11-28 22:44:41,358 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 23:45:48] 2025-11-28 22:44:41,358 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 23:45:48] 2025-11-28 22:44:41,358 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 23:45:48] 2025-11-28 22:44:41,358 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 23:45:48] 2025-11-28 22:44:41,358 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 23:45:48] 2025-11-28 22:44:41,358 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 23:45:48] 2025-11-28 22:44:41,358 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 23:45:48] 2025-11-28 22:44:41,358 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 23:45:48] 2025-11-28 22:44:41,358 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 23:45:48] 2025-11-28 22:44:41,358 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 23:45:48] 2025-11-28 22:44:41,358 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 23:45:48] 2025-11-28 22:44:41,359 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 23:45:48] 2025-11-28 22:44:41,359 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 23:45:48] 2025-11-28 22:44:41,359 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 23:45:48] 2025-11-28 22:44:41,359 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 23:45:48] 2025-11-28 22:44:41,359 | INFO     | job 6899115418 has completed (purged errors)
[2025-11-28 23:45:48] 2025-11-28 22:44:41,359 | INFO     | overall cleanup function is called
[2025-11-28 23:45:48] 2025-11-28 22:44:42,369 | INFO     | --- collectZombieJob: --- 10, [1862261]
[2025-11-28 23:45:48] 2025-11-28 22:44:42,369 | INFO     | zombie collector waiting for pid 1862261
[2025-11-28 23:45:48] 2025-11-28 22:44:42,369 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 23:45:48] 2025-11-28 22:44:42,369 | INFO     | collected zombie processes
[2025-11-28 23:45:48] 2025-11-28 22:44:42,369 | INFO     | will attempt to kill all subprocesses of pid=1862261
[2025-11-28 23:45:48] 2025-11-28 22:44:42,398 | INFO     | process IDs to be killed: [1862261] (in reverse order)
[2025-11-28 23:45:48] 2025-11-28 22:44:42,414 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 23:45:48] 2025-11-28 22:44:42,414 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 23:45:48] 2025-11-28 22:44:42,415 | INFO     | did not find any defunct processes belonging to 1862261
[2025-11-28 23:45:48] 2025-11-28 22:44:42,415 | INFO     | did not find any defunct processes belonging to 1862261
[2025-11-28 23:45:48] 2025-11-28 22:44:42,416 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 23:45:48] 2025-11-28 22:44:42,416 | INFO     | ready for new job
[2025-11-28 23:45:48] 2025-11-28 22:44:42,416 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 23:45:48] 2025-11-28 22:44:42,417 | INFO     | ***************************************
[2025-11-28 23:45:48] 2025-11-28 22:44:42,417 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 23:45:48] 2025-11-28 22:44:42,417 | INFO     | ***************************************
[2025-11-28 23:45:48] 2025-11-28 22:44:42,417 | INFO     | 
[2025-11-28 23:45:48] 2025-11-28 22:44:42,417 | INFO     | architecture information:
[2025-11-28 23:45:48] 2025-11-28 22:44:42,417 | INFO     | executing command: cat /etc/os-release
[2025-11-28 23:45:48] 2025-11-28 22:44:42,423 | INFO     | cat /etc/os-release:
[2025-11-28 23:45:48] NAME="CentOS Linux"
[2025-11-28 23:45:48] VERSION="7 (Core)"
[2025-11-28 23:45:48] ID="centos"
[2025-11-28 23:45:48] ID_LIKE="rhel fedora"
[2025-11-28 23:45:48] VERSION_ID="7"
[2025-11-28 23:45:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 23:45:48] ANSI_COLOR="0;31"
[2025-11-28 23:45:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 23:45:48] HOME_URL="https://www.centos.org/"
[2025-11-28 23:45:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 23:45:48] 
[2025-11-28 23:45:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 23:45:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 23:45:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 23:45:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 23:45:48] 
[2025-11-28 23:45:48] 2025-11-28 22:44:42,423 | INFO     | ***************************************
[2025-11-28 23:45:48] 2025-11-28 22:44:42,926 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-11-28 23:45:48] 2025-11-28 22:44:42,933 | INFO     | sufficient remaining disk space (115444023296 B)
[2025-11-28 23:45:48] 2025-11-28 22:44:42,933 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 23:45:48] 2025-11-28 22:44:42,933 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 23:45:48] 2025-11-28 22:44:42,933 | INFO     | update_server=False
[2025-11-28 23:45:48] 2025-11-28 22:44:42,933 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 23:45:48] 2025-11-28 22:44:42,934 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 23:45:48] 2025-11-28 22:44:42,934 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 23:45:48] 2025-11-28 22:44:42,934 | INFO     | aborting loop
[2025-11-28 23:45:48] 2025-11-28 22:44:43,654 | INFO     | all data control threads have been joined
[2025-11-28 23:45:48] 2025-11-28 22:44:43,830 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 23:45:48] 2025-11-28 22:44:43,938 | INFO     | [job] job monitor thread has finished
[2025-11-28 23:45:48] 2025-11-28 22:44:43,939 | INFO     | [job] retrieve thread has finished
[2025-11-28 23:45:48] 2025-11-28 22:44:43,939 | INFO     | [job] queue monitor thread has finished
[2025-11-28 23:45:48] 2025-11-28 22:44:43,951 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 23:45:48] 2025-11-28 22:44:44,068 | INFO     | all job control threads have been joined
[2025-11-28 23:45:48] 2025-11-28 22:44:44,272 | INFO     | [data] copytool_in thread has finished
[2025-11-28 23:45:48] 2025-11-28 22:44:44,345 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 23:45:48] 2025-11-28 22:44:44,401 | INFO     | all payload control threads have been joined
[2025-11-28 23:45:48] 2025-11-28 22:44:44,660 | INFO     | [data] control thread has finished
[2025-11-28 23:45:48] 2025-11-28 22:44:44,786 | INFO     | [payload] validate_post thread has finished
[2025-11-28 23:45:48] 2025-11-28 22:44:45,000 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 23:45:48] 2025-11-28 22:44:45,073 | INFO     | [job] control thread has finished
[2025-11-28 23:45:48] 2025-11-28 22:44:45,093 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 23:45:48] 2025-11-28 22:44:45,245 | INFO     | [job] validate thread has finished
[2025-11-28 23:45:48] 2025-11-28 22:44:45,387 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 23:45:48] 2025-11-28 22:44:45,407 | INFO     | [payload] control thread has finished
[2025-11-28 23:45:48] 2025-11-28 22:44:45,485 | INFO     | [payload] failed_post thread has finished
[2025-11-28 23:45:48] 2025-11-28 22:44:45,835 | INFO     | [data] copytool_out thread has finished
[2025-11-28 23:45:48] 2025-11-28 22:44:49,099 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 23:45:48] 2025-11-28 22:45:13,225 | INFO     | PID=1854948 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 23:45:48] 2025-11-28 22:45:13,225 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 23:45:48] 2025-11-28 22:45:13,225 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 23:45:48] 2025-11-28 22:45:13,225 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 23:45:48] 2025-11-28 22:45:42,304 | INFO     | [monitor] cgroup control has ended
[2025-11-28 23:45:48] 2025-11-28 22:45:43,309 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140426425177920)>', '<ExcThread(monitor, started 140425893504768)>']
[2025-11-28 23:45:48] 2025-11-28 22:45:43,378 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 23:45:48] 2025-11-28 22:45:43,378 | INFO     | [monitor] control thread has ended
[2025-11-28 23:45:48] 2025-11-28 22:45:48,335 | INFO     | all workflow threads have been joined
[2025-11-28 23:45:48] 2025-11-28 22:45:48,335 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 23:45:48] 2025-11-28 22:45:48,335 | INFO     | traces error code: 0
[2025-11-28 23:45:48] 2025-11-28 22:45:48,335 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 23:45:48] 2025-11-28 22:45:48,412 [wrapper] ==== pilot stdout END ====
[2025-11-28 23:45:48] 2025-11-28 22:45:48,413 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 23:45:48] 2025-11-28 22:45:48,414 [wrapper] pilotpid: 1854948
[2025-11-28 23:45:48] 2025-11-28 22:45:48,415 [wrapper] Pilot exit status: 0
[2025-11-28 23:45:48] 2025-11-28 22:45:48,420 [wrapper] pandaids: 6899115418
[2025-11-28 23:45:48] 2025-11-28 22:45:48,431 [wrapper] cleanup supervisor_pilot 1929610 1854949
[2025-11-28 23:45:48] 2025-11-28 22:45:48,432 [wrapper] Test setup, not cleaning
[2025-11-28 23:45:48] 2025-11-28 22:45:48,433 [wrapper] apfmon messages muted
[2025-11-28 23:45:48] 2025-11-28 22:45:48,434 [wrapper] ==== wrapper stdout END ====
[2025-11-28 23:45:48] 2025-11-28 22:45:48,435 [wrapper] ==== wrapper stderr END ====
[2025-11-28 23:45:48]  *** Error codes and diagnostics ***
[2025-11-28 23:45:48]     "exeErrorCode": 0,
[2025-11-28 23:45:48]     "exeErrorDiag": "",
[2025-11-28 23:45:48]     "pilotErrorCode": 0,
[2025-11-28 23:45:48]     "pilotErrorDiag": "",
[2025-11-28 23:45:48]  *** Listing of results directory ***
[2025-11-28 23:45:48] total 1308704
[2025-11-28 23:45:48] -rw-r--r--. 1 boinc boinc    576529 Nov 27 02:09 pilot3.tar.gz
[2025-11-28 23:45:48] -rwx------. 1 boinc boinc     36292 Nov 27 02:26 runpilot2-wrapper.sh
[2025-11-28 23:45:48] -rw-r--r--. 1 boinc boinc      5112 Nov 27 02:27 queuedata.json
[2025-11-28 23:45:48] -rw-r--r--. 1 boinc boinc       100 Nov 28 16:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 23:45:48] -rwxr-xr-x. 1 boinc boinc      7986 Nov 28 16:15 run_atlas
[2025-11-28 23:45:48] -rw-r--r--. 1 boinc boinc       105 Nov 28 16:15 job.xml
[2025-11-28 23:45:48] -rw-r--r--. 1 boinc boinc      6277 Nov 28 16:15 init_data.xml
[2025-11-28 23:45:48] -rw-r--r--. 2 boinc boinc 409700794 Nov 28 16:15 EVNT.47483658._004305.pool.root.1
[2025-11-28 23:45:48] -rw-r--r--. 2 boinc boinc     15847 Nov 28 16:15 start_atlas.sh
[2025-11-28 23:45:48] drwxrwx--x. 2 boinc boinc        68 Nov 28 16:15 shared
[2025-11-28 23:45:48] -rw-r--r--. 2 boinc boinc    590107 Nov 28 16:15 input.tar.gz
[2025-11-28 23:45:48] -rw-r--r--. 1 boinc boinc         0 Nov 28 16:15 boinc_lockfile
[2025-11-28 23:45:48] -rw-r--r--. 1 boinc boinc      2786 Nov 28 16:15 pandaJob.out
[2025-11-28 23:45:48] -rw-------. 1 boinc boinc    991856 Nov 28 16:15 agis_schedconf.cvmfs.json
[2025-11-28 23:45:48] drwx------. 5 boinc boinc      4096 Nov 28 16:15 pilot3
[2025-11-28 23:45:48] -rw-r--r--. 1 boinc boinc       532 Nov 28 23:40 boinc_task_state.xml
[2025-11-28 23:45:48] -rw-------. 1 boinc boinc 915527717 Nov 28 23:44 HITS.47556185._000687.pool.root.1
[2025-11-28 23:45:48] -rw-------. 1 boinc boinc      1034 Nov 28 23:44 memory_monitor_summary.json
[2025-11-28 23:45:48] -rw-------. 1 boinc boinc        95 Nov 28 23:44 pilot_heartbeat.json
[2025-11-28 23:45:48] -rw-------. 1 boinc boinc   1516240 Nov 28 23:44 agis_ddmendpoints.agis.ALL.json
[2025-11-28 23:45:48] -rw-------. 1 boinc boinc   1704962 Nov 28 23:44 log.47556185._000687.job.log.tgz.1
[2025-11-28 23:45:48] -rw-------. 1 boinc boinc      8614 Nov 28 23:44 heartbeat.json
[2025-11-28 23:45:48] -rw-r--r--. 1 boinc boinc      8192 Nov 28 23:45 boinc_mmap_file
[2025-11-28 23:45:48] -rw-r--r--. 1 boinc boinc        29 Nov 28 23:45 wrapper_checkpoint.txt
[2025-11-28 23:45:48] -rw-------. 1 boinc boinc      4750 Nov 28 23:45 pilotlog.txt
[2025-11-28 23:45:48] -rw-------. 1 boinc boinc   3787641 Nov 28 23:45 log.47556185._000687.job.log.1
[2025-11-28 23:45:48] -rw-------. 1 boinc boinc       353 Nov 28 23:45 output.list
[2025-11-28 23:45:48] -rw-r--r--. 1 boinc boinc       620 Nov 28 23:45 runtime_log
[2025-11-28 23:45:48] -rw-------. 1 boinc boinc   5509120 Nov 28 23:45 result.tar.gz
[2025-11-28 23:45:48] -rw-r--r--. 1 boinc boinc      8847 Nov 28 23:45 runtime_log.err
[2025-11-28 23:45:48] -rw-------. 1 boinc boinc       659 Nov 28 23:45 1f3LDmmxfi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmXZNKDm0CiCxn.diag
[2025-11-28 23:45:48] -rw-r--r--. 1 boinc boinc     21473 Nov 28 23:45 stderr.txt
[2025-11-28 23:45:48] HITS file was successfully produced:
[2025-11-28 23:45:48] -rw-------. 1 boinc boinc 915527717 Nov 28 23:44 shared/HITS.pool.root.1
[2025-11-28 23:45:48]  *** Contents of shared directory: ***
[2025-11-28 23:45:48] total 1300148
[2025-11-28 23:45:48] -rw-r--r--. 2 boinc boinc 409700794 Nov 28 16:15 ATLAS.root_0
[2025-11-28 23:45:48] -rw-r--r--. 2 boinc boinc     15847 Nov 28 16:15 start_atlas.sh
[2025-11-28 23:45:48] -rw-r--r--. 2 boinc boinc    590107 Nov 28 16:15 input.tar.gz
[2025-11-28 23:45:48] -rw-------. 1 boinc boinc 915527717 Nov 28 23:44 HITS.pool.root.1
[2025-11-28 23:45:48] -rw-------. 1 boinc boinc   5509120 Nov 28 23:45 result.tar.gz
23:45:50 (1851188): run_atlas exited; CPU time 210218.878992
23:45:50 (1851188): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN