Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:14:56 (3832072): wrapper (7.7.26015): starting
07:14:56 (3832072): wrapper: running run_atlas (--nthreads 3)
[2025-11-30 07:14:56] Arguments: --nthreads 3
[2025-11-30 07:14:56] Threads: 3
[2025-11-30 07:14:56] Checking for CVMFS
[2025-11-30 07:14:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-30 07:14:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-30 07:14:56] Running cvmfs_config stat atlas.cern.ch
[2025-11-30 07:14:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-30 07:14:56] 2.9.2.0 2027077 8552 100096 153471 2 55 19990441 36864001 0 130560 0 3188546 99.981 323254 1440 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-30 07:14:56] CVMFS is ok
[2025-11-30 07:14:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-30 07:14:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-30 07:14:56] Further information can be found at the LHC@home message board.
[2025-11-30 07:14:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-30 07:14:56] Checking for apptainer binary...
[2025-11-30 07:14:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-30 07:14:56] Running /usr/bin/apptainer --version
[2025-11-30 07:14:56] apptainer version 1.4.1-1.1
[2025-11-30 07:14:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-30 07:14:56] legendA163
[2025-11-30 07:14:56] apptainer works
[2025-11-30 07:14:56] Set ATHENA_PROC_NUMBER=3
[2025-11-30 07:14:56] Set ATHENA_CORE_NUMBER=3
[2025-11-30 07:14:56] Starting ATLAS job with PandaID=6898271400
[2025-11-30 07:14:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-30 15:18:41]  *** The last 200 lines of the pilot log: ***
[2025-11-30 15:18:41] 2025-11-30 14:17:44,490 | INFO     | time since job start (28962s) is within the limit (172800.0s)
[2025-11-30 15:18:41] 2025-11-30 14:17:44,853 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-30 15:18:41] 2025-11-30 14:17:44,854 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3786.0753333333337
[2025-11-30 15:18:41] 2025-11-30 14:17:44,855 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6898271400/memory_monitor_summary.json (trf name=prmon)
[2025-11-30 15:18:41] 2025-11-30 14:17:44,855 | INFO     | extracted standard info from prmon json
[2025-11-30 15:18:41] 2025-11-30 14:17:44,855 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 15:18:41] 2025-11-30 14:17:44,855 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 15:18:41] 2025-11-30 14:17:44,858 | INFO     | fitting pss+swap vs Time
[2025-11-30 15:18:41] 2025-11-30 14:17:44,858 | INFO     | sum of square deviations: 33232064950.0
[2025-11-30 15:18:41] 2025-11-30 14:17:44,860 | INFO     | sum of deviations: 196699941810.00003
[2025-11-30 15:18:41] 2025-11-30 14:17:44,860 | INFO     | mean x: 1764497779.0
[2025-11-30 15:18:41] 2025-11-30 14:17:44,860 | INFO     | mean y: 2206267.56
[2025-11-30 15:18:41] 2025-11-30 14:17:44,860 | INFO     | intersect: -10441821540.383192
[2025-11-30 15:18:41] 2025-11-30 14:17:44,861 | INFO     | chi2: 4.029549140686406
[2025-11-30 15:18:41] 2025-11-30 14:17:44,861 | INFO     | sum of square deviations: 32193636177.5
[2025-11-30 15:18:41] 2025-11-30 14:17:44,862 | INFO     | sum of deviations: 268851570159.50003
[2025-11-30 15:18:41] 2025-11-30 14:17:44,862 | INFO     | mean x: 1764497626.5
[2025-11-30 15:18:41] 2025-11-30 14:17:44,863 | INFO     | mean y: 2216829.5085106385
[2025-11-30 15:18:41] 2025-11-30 14:17:44,863 | INFO     | intersect: -14733240663.136692
[2025-11-30 15:18:41] 2025-11-30 14:17:44,863 | INFO     | chi2: 2.348151228131303
[2025-11-30 15:18:41] 2025-11-30 14:17:44,863 | INFO     | current chi2=2.348151228131303 (change=41.72670077597536 %)
[2025-11-30 15:18:41] 2025-11-30 14:17:44,863 | INFO     | sum of square deviations: 31177068280.0
[2025-11-30 15:18:41] 2025-11-30 14:17:44,865 | INFO     | sum of deviations: 263127308717.99997
[2025-11-30 15:18:41] 2025-11-30 14:17:44,865 | INFO     | mean x: 1764497474.0
[2025-11-30 15:18:41] 2025-11-30 14:17:44,865 | INFO     | mean y: 2215970.9978494626
[2025-11-30 15:18:41] 2025-11-30 14:17:44,865 | INFO     | intersect: -14889738185.935125
[2025-11-30 15:18:41] 2025-11-30 14:17:44,865 | INFO     | chi2: 2.3480483825840275
[2025-11-30 15:18:41] 2025-11-30 14:17:44,865 | INFO     | current chi2=2.3480483825840275 (change=0.004379851946639757 %)
[2025-11-30 15:18:41] 2025-11-30 14:17:44,865 | INFO     | right removable region: 464
[2025-11-30 15:18:41] 2025-11-30 14:17:44,865 | INFO     | sum of square deviations: 32193636177.5
[2025-11-30 15:18:41] 2025-11-30 14:17:44,867 | INFO     | sum of deviations: 96259945381.50003
[2025-11-30 15:18:41] 2025-11-30 14:17:44,867 | INFO     | mean x: 1764497931.5
[2025-11-30 15:18:41] 2025-11-30 14:17:44,867 | INFO     | mean y: 2220997.840425532
[2025-11-30 15:18:41] 2025-11-30 14:17:44,867 | INFO     | intersect: -5273681157.961023
[2025-11-30 15:18:41] 2025-11-30 14:17:44,867 | INFO     | chi2: 1.9232622022528625
[2025-11-30 15:18:41] 2025-11-30 14:17:44,868 | INFO     | current chi2=1.9232622022528625 (change=52.27103243800501 %)
[2025-11-30 15:18:41] 2025-11-30 14:17:44,868 | INFO     | sum of square deviations: 31177068280.0
[2025-11-30 15:18:41] 2025-11-30 14:17:44,870 | INFO     | sum of deviations: 73532016533.99998
[2025-11-30 15:18:41] 2025-11-30 14:17:44,870 | INFO     | mean x: 1764498084.0
[2025-11-30 15:18:41] 2025-11-30 14:17:44,870 | INFO     | mean y: 2224392.131182796
[2025-11-30 15:18:41] 2025-11-30 14:17:44,870 | INFO     | intersect: -4159395331.751954
[2025-11-30 15:18:41] 2025-11-30 14:17:44,870 | INFO     | chi2: 1.7569153162165483
[2025-11-30 15:18:41] 2025-11-30 14:17:44,870 | INFO     | current chi2=1.7569153162165483 (change=8.649204764772039 %)
[2025-11-30 15:18:41] 2025-11-30 14:17:44,870 | INFO     | left removable region: 20
[2025-11-30 15:18:41] 2025-11-30 14:17:44,870 | INFO     | sum of square deviations: 27140955395.0
[2025-11-30 15:18:41] 2025-11-30 14:17:44,872 | INFO     | sum of deviations: 127145777488.0
[2025-11-30 15:18:41] 2025-11-30 14:17:44,872 | INFO     | mean x: 1764498053.5
[2025-11-30 15:18:41] 2025-11-30 14:17:44,872 | INFO     | mean y: 2236723.5135135134
[2025-11-30 15:18:41] 2025-11-30 14:17:44,872 | INFO     | intersect: -8263812633.3801775
[2025-11-30 15:18:41] 2025-11-30 14:17:44,872 | INFO     | chi2: 0.05501232612106734
[2025-11-30 15:18:41] 2025-11-30 14:17:44,872 | INFO     | current memory leak: 4.68 B/s (using 444 data points, chi2=0.06)
[2025-11-30 15:18:41] 2025-11-30 14:17:44,873 | INFO     | could have reported an average CPU frequency of 3900 MHz (20 samples)
[2025-11-30 15:18:41] 2025-11-30 14:17:44,873 | INFO     | ..............................
[2025-11-30 15:18:41] 2025-11-30 14:17:44,873 | INFO     | . Timing measurements:
[2025-11-30 15:18:41] 2025-11-30 14:17:44,873 | INFO     | . get job = 0 s
[2025-11-30 15:18:41] 2025-11-30 14:17:44,873 | INFO     | . initial setup = 1 s
[2025-11-30 15:18:41] 2025-11-30 14:17:44,873 | INFO     | . payload setup = 3 s
[2025-11-30 15:18:41] 2025-11-30 14:17:44,873 | INFO     | . stage-in = 0 s
[2025-11-30 15:18:41] 2025-11-30 14:17:44,873 | INFO     | . payload execution = 28936 s
[2025-11-30 15:18:41] 2025-11-30 14:17:44,873 | INFO     | . stage-out = 1 s
[2025-11-30 15:18:41] 2025-11-30 14:17:44,873 | INFO     | . log creation = 0 s
[2025-11-30 15:18:41] 2025-11-30 14:17:44,873 | INFO     | ..............................
[2025-11-30 15:18:41] 2025-11-30 14:17:44,902 | INFO     | 
[2025-11-30 15:18:41] 2025-11-30 14:17:44,902 | INFO     | job summary report
[2025-11-30 15:18:41] 2025-11-30 14:17:44,902 | INFO     | --------------------------------------------------
[2025-11-30 15:18:41] 2025-11-30 14:17:44,902 | INFO     | PanDA job id: 6898271400
[2025-11-30 15:18:41] 2025-11-30 14:17:44,902 | INFO     | task id: 47556161
[2025-11-30 15:18:41] 2025-11-30 14:17:44,902 | INFO     | errors: (none)
[2025-11-30 15:18:41] 2025-11-30 14:17:44,902 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-30 15:18:41] 2025-11-30 14:17:44,902 | INFO     | pilot state: finished 
[2025-11-30 15:18:41] 2025-11-30 14:17:44,902 | INFO     | transexitcode: 0
[2025-11-30 15:18:41] 2025-11-30 14:17:44,903 | INFO     | exeerrorcode: 0
[2025-11-30 15:18:41] 2025-11-30 14:17:44,903 | INFO     | exeerrordiag: 
[2025-11-30 15:18:41] 2025-11-30 14:17:44,903 | INFO     | exitcode: 0
[2025-11-30 15:18:41] 2025-11-30 14:17:44,903 | INFO     | exitmsg: OK
[2025-11-30 15:18:41] 2025-11-30 14:17:44,903 | INFO     | cpuconsumptiontime: 85423 s
[2025-11-30 15:18:41] 2025-11-30 14:17:44,903 | INFO     | nevents: 1000
[2025-11-30 15:18:41] 2025-11-30 14:17:44,903 | INFO     | neventsw: 0
[2025-11-30 15:18:41] 2025-11-30 14:17:44,903 | INFO     | pid: 3842241
[2025-11-30 15:18:41] 2025-11-30 14:17:44,903 | INFO     | pgrp: 3842241
[2025-11-30 15:18:41] 2025-11-30 14:17:44,903 | INFO     | corecount: 3
[2025-11-30 15:18:41] 2025-11-30 14:17:44,903 | INFO     | event service: False
[2025-11-30 15:18:41] 2025-11-30 14:17:44,903 | INFO     | sizes: {0: 2284261, 2: 2284523, 10: 2284551, 28943: 2323509, 28945: 2332509, 28947: 2332565, 28949: 2332939}
[2025-11-30 15:18:41] 2025-11-30 14:17:44,903 | INFO     | --------------------------------------------------
[2025-11-30 15:18:41] 2025-11-30 14:17:44,903 | INFO     | 
[2025-11-30 15:18:41] 2025-11-30 14:17:44,903 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-30 15:18:41] 2025-11-30 14:17:44,915 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-30 15:18:41] 2025-11-30 14:17:44,915 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-30 15:18:41] 2025-11-30 14:17:44,915 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-30 15:18:41] 2025-11-30 14:17:44,915 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-30 15:18:41] 2025-11-30 14:17:44,915 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-30 15:18:41] 2025-11-30 14:17:44,915 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-30 15:18:41] 2025-11-30 14:17:44,915 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-30 15:18:41] 2025-11-30 14:17:44,915 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-30 15:18:41] 2025-11-30 14:17:44,916 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-30 15:18:41] 2025-11-30 14:17:44,916 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-30 15:18:41] 2025-11-30 14:17:44,916 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-30 15:18:41] 2025-11-30 14:17:44,916 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-30 15:18:41] 2025-11-30 14:17:44,916 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-30 15:18:41] 2025-11-30 14:17:44,916 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-30 15:18:41] 2025-11-30 14:17:44,916 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-30 15:18:41] 2025-11-30 14:17:44,916 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-30 15:18:41] 2025-11-30 14:17:44,916 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-30 15:18:41] 2025-11-30 14:17:44,916 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-30 15:18:41] 2025-11-30 14:17:44,916 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-30 15:18:41] 2025-11-30 14:17:44,916 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-30 15:18:41] 2025-11-30 14:17:44,916 | INFO     | job 6898271400 has completed (purged errors)
[2025-11-30 15:18:41] 2025-11-30 14:17:44,916 | INFO     | overall cleanup function is called
[2025-11-30 15:18:41] 2025-11-30 14:17:45,924 | INFO     | --- collectZombieJob: --- 10, [3842241]
[2025-11-30 15:18:41] 2025-11-30 14:17:45,925 | INFO     | zombie collector waiting for pid 3842241
[2025-11-30 15:18:41] 2025-11-30 14:17:45,925 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-30 15:18:41] 2025-11-30 14:17:45,925 | INFO     | collected zombie processes
[2025-11-30 15:18:41] 2025-11-30 14:17:45,925 | INFO     | will attempt to kill all subprocesses of pid=3842241
[2025-11-30 15:18:41] 2025-11-30 14:17:45,979 | INFO     | process IDs to be killed: [3842241] (in reverse order)
[2025-11-30 15:18:41] 2025-11-30 14:17:46,006 | WARNING  | found no corresponding commands to process id(s)
[2025-11-30 15:18:41] 2025-11-30 14:17:46,006 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-30 15:18:41] 2025-11-30 14:17:46,007 | INFO     | did not find any defunct processes belonging to 3842241
[2025-11-30 15:18:41] 2025-11-30 14:17:46,009 | INFO     | did not find any defunct processes belonging to 3842241
[2025-11-30 15:18:41] 2025-11-30 14:17:46,009 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-30 15:18:41] 2025-11-30 14:17:46,009 | INFO     | ready for new job
[2025-11-30 15:18:41] 2025-11-30 14:17:46,009 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-30 15:18:41] 2025-11-30 14:17:46,010 | INFO     | ***************************************
[2025-11-30 15:18:41] 2025-11-30 14:17:46,011 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-30 15:18:41] 2025-11-30 14:17:46,011 | INFO     | ***************************************
[2025-11-30 15:18:41] 2025-11-30 14:17:46,011 | INFO     | 
[2025-11-30 15:18:41] 2025-11-30 14:17:46,011 | INFO     | architecture information:
[2025-11-30 15:18:41] 2025-11-30 14:17:46,011 | INFO     | executing command: cat /etc/os-release
[2025-11-30 15:18:41] 2025-11-30 14:17:46,020 | INFO     | cat /etc/os-release:
[2025-11-30 15:18:41] NAME="CentOS Linux"
[2025-11-30 15:18:41] VERSION="7 (Core)"
[2025-11-30 15:18:41] ID="centos"
[2025-11-30 15:18:41] ID_LIKE="rhel fedora"
[2025-11-30 15:18:41] VERSION_ID="7"
[2025-11-30 15:18:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-30 15:18:41] ANSI_COLOR="0;31"
[2025-11-30 15:18:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-30 15:18:41] HOME_URL="https://www.centos.org/"
[2025-11-30 15:18:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-30 15:18:41] 
[2025-11-30 15:18:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-30 15:18:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-30 15:18:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-30 15:18:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-30 15:18:41] 
[2025-11-30 15:18:41] 2025-11-30 14:17:46,020 | INFO     | ***************************************
[2025-11-30 15:18:41] 2025-11-30 14:17:46,523 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-30 15:18:41] 2025-11-30 14:17:46,535 | INFO     | sufficient remaining disk space (381847339008 B)
[2025-11-30 15:18:41] 2025-11-30 14:17:46,535 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-30 15:18:41] 2025-11-30 14:17:46,536 | INFO     | current server update state: UPDATING_FINAL
[2025-11-30 15:18:41] 2025-11-30 14:17:46,536 | INFO     | update_server=False
[2025-11-30 15:18:41] 2025-11-30 14:17:46,536 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-30 15:18:41] 2025-11-30 14:17:46,536 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-30 15:18:41] 2025-11-30 14:17:46,536 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-30 15:18:41] 2025-11-30 14:17:46,758 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-30 15:18:41] 2025-11-30 14:17:46,758 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-30 15:18:41] 2025-11-30 14:17:46,758 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-30 15:18:41] 2025-11-30 14:17:46,758 | INFO     | will abort loop
[2025-11-30 15:18:41] 2025-11-30 14:17:46,928 | INFO     | all payload control threads have been joined
[2025-11-30 15:18:41] 2025-11-30 14:17:47,446 | INFO     | all data control threads have been joined
[2025-11-30 15:18:41] 2025-11-30 14:17:47,541 | INFO     | [job] queue monitor thread has finished
[2025-11-30 15:18:41] 2025-11-30 14:17:47,541 | INFO     | [job] retrieve thread has finished
[2025-11-30 15:18:41] 2025-11-30 14:17:47,600 | INFO     | [payload] failed_post thread has finished
[2025-11-30 15:18:41] 2025-11-30 14:17:47,764 | INFO     | [job] job monitor thread has finished
[2025-11-30 15:18:41] 2025-11-30 14:17:47,869 | INFO     | all job control threads have been joined
[2025-11-30 15:18:41] 2025-11-30 14:17:47,934 | INFO     | [payload] control thread has finished
[2025-11-30 15:18:41] 2025-11-30 14:17:48,225 | INFO     | [payload] validate_post thread has finished
[2025-11-30 15:18:41] 2025-11-30 14:17:48,233 | INFO     | [data] copytool_in thread has finished
[2025-11-30 15:18:41] 2025-11-30 14:17:48,246 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-30 15:18:41] 2025-11-30 14:17:48,452 | INFO     | [data] control thread has finished
[2025-11-30 15:18:41] 2025-11-30 14:17:48,534 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-30 15:18:41] 2025-11-30 14:17:48,542 | INFO     | [data] copytool_out thread has finished
[2025-11-30 15:18:41] 2025-11-30 14:17:48,685 | INFO     | [job] validate thread has finished
[2025-11-30 15:18:41] 2025-11-30 14:17:48,686 | INFO     | [job] create_data_payload thread has finished
[2025-11-30 15:18:41] 2025-11-30 14:17:48,699 | INFO     | [payload] validate_pre thread has finished
[2025-11-30 15:18:41] 2025-11-30 14:17:48,750 | INFO     | [payload] execute_payloads thread has finished
[2025-11-30 15:18:41] 2025-11-30 14:17:48,872 | INFO     | [job] control thread has finished
[2025-11-30 15:18:41] 2025-11-30 14:17:52,541 | INFO     | [data] queue_monitor thread has finished
[2025-11-30 15:18:41] 2025-11-30 14:18:16,556 | INFO     | 28965s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-30 15:18:41] 2025-11-30 14:18:17,630 | INFO     | PID=3835792 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-30 15:18:41] 2025-11-30 14:18:17,630 | INFO     | found 0 job(s) in 20 queues
[2025-11-30 15:18:41] 2025-11-30 14:18:17,630 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-30 15:18:41] 2025-11-30 14:18:17,630 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-30 15:18:41] 2025-11-30 14:18:35,876 | INFO     | [monitor] cgroup control has ended
[2025-11-30 15:18:41] 2025-11-30 14:18:36,022 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139786282243904)>', '<ExcThread(monitor, started 139785800767232)>']
[2025-11-30 15:18:41] 2025-11-30 14:18:36,728 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-30 15:18:41] 2025-11-30 14:18:36,728 | INFO     | [monitor] control thread has ended
[2025-11-30 15:18:41] 2025-11-30 14:18:41,042 | INFO     | all workflow threads have been joined
[2025-11-30 15:18:41] 2025-11-30 14:18:41,042 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-30 15:18:41] 2025-11-30 14:18:41,042 | INFO     | traces error code: 0
[2025-11-30 15:18:41] 2025-11-30 14:18:41,043 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-30 15:18:41] 2025-11-30 14:18:41,093 [wrapper] ==== pilot stdout END ====
[2025-11-30 15:18:41] 2025-11-30 14:18:41,096 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-30 15:18:41] 2025-11-30 14:18:41,098 [wrapper] pilotpid: 3835792
[2025-11-30 15:18:41] 2025-11-30 14:18:41,100 [wrapper] Pilot exit status: 0
[2025-11-30 15:18:41] 2025-11-30 14:18:41,107 [wrapper] pandaids: 6898271400
[2025-11-30 15:18:41] 2025-11-30 14:18:41,126 [wrapper] cleanup supervisor_pilot 3909660 3835793
[2025-11-30 15:18:41] 2025-11-30 14:18:41,129 [wrapper] Test setup, not cleaning
[2025-11-30 15:18:41] 2025-11-30 14:18:41,131 [wrapper] apfmon messages muted
[2025-11-30 15:18:41] 2025-11-30 14:18:41,133 [wrapper] ==== wrapper stdout END ====
[2025-11-30 15:18:41] 2025-11-30 14:18:41,136 [wrapper] ==== wrapper stderr END ====
[2025-11-30 15:18:41]  *** Error codes and diagnostics ***
[2025-11-30 15:18:41]     "exeErrorCode": 0,
[2025-11-30 15:18:41]     "exeErrorDiag": "",
[2025-11-30 15:18:41]     "pilotErrorCode": 0,
[2025-11-30 15:18:41]     "pilotErrorDiag": "",
[2025-11-30 15:18:41]  *** Listing of results directory ***
[2025-11-30 15:18:41] total 1315428
[2025-11-30 15:18:41] -rwx------ 1 boinc boinc     36292 Nov 26 16:05 runpilot2-wrapper.sh
[2025-11-30 15:18:41] -rw-r--r-- 1 boinc boinc      5112 Nov 26 16:05 queuedata.json
[2025-11-30 15:18:41] -rw-r--r-- 1 boinc boinc    576529 Nov 26 16:05 pilot3.tar.gz
[2025-11-30 15:18:41] -rw-r--r-- 1 boinc boinc       100 Nov 30 07:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-30 15:18:41] -rwxr-xr-x 1 boinc boinc      7986 Nov 30 07:14 run_atlas
[2025-11-30 15:18:41] -rw-r--r-- 1 boinc boinc       105 Nov 30 07:14 job.xml
[2025-11-30 15:18:41] -rw-r--r-- 2 boinc boinc 409615121 Nov 30 07:14 EVNT.47483658._002534.pool.root.1
[2025-11-30 15:18:41] -rw-r--r-- 2 boinc boinc    590100 Nov 30 07:14 input.tar.gz
[2025-11-30 15:18:41] -rw-r--r-- 2 boinc boinc     15847 Nov 30 07:14 start_atlas.sh
[2025-11-30 15:18:41] drwxrwx--x 2 boinc boinc      4096 Nov 30 07:14 shared
[2025-11-30 15:18:41] -rw-r--r-- 1 boinc boinc         0 Nov 30 07:14 boinc_setup_complete
[2025-11-30 15:18:41] -rw-r--r-- 1 boinc boinc      6451 Nov 30 07:14 init_data.xml
[2025-11-30 15:18:41] -rw-r--r-- 1 boinc boinc         0 Nov 30 07:14 boinc_lockfile
[2025-11-30 15:18:41] -rw-r--r-- 1 boinc boinc      2782 Nov 30 07:14 pandaJob.out
[2025-11-30 15:18:41] -rw------- 1 boinc boinc    991740 Nov 30 07:15 agis_schedconf.cvmfs.json
[2025-11-30 15:18:41] drwx------ 5 boinc boinc      4096 Nov 30 07:15 pilot3
[2025-11-30 15:18:41] -rw-r--r-- 1 boinc boinc       531 Nov 30 15:13 boinc_task_state.xml
[2025-11-30 15:18:41] -rw------- 1 boinc boinc 922997184 Nov 30 15:17 HITS.47556161._005161.pool.root.1
[2025-11-30 15:18:41] -rw------- 1 boinc boinc      1021 Nov 30 15:17 memory_monitor_summary.json
[2025-11-30 15:18:41] -rw------- 1 boinc boinc   1516240 Nov 30 15:17 agis_ddmendpoints.agis.ALL.json
[2025-11-30 15:18:41] -rw------- 1 boinc boinc   1158490 Nov 30 15:17 log.47556161._005161.job.log.tgz.1
[2025-11-30 15:18:41] -rw------- 1 boinc boinc      8562 Nov 30 15:17 heartbeat.json
[2025-11-30 15:18:41] -rw------- 1 boinc boinc        95 Nov 30 15:17 pilot_heartbeat.json
[2025-11-30 15:18:41] -rw-r--r-- 1 boinc boinc      8192 Nov 30 15:18 boinc_mmap_file
[2025-11-30 15:18:41] -rw-r--r-- 1 boinc boinc        28 Nov 30 15:18 wrapper_checkpoint.txt
[2025-11-30 15:18:41] -rw------- 1 boinc boinc      5054 Nov 30 15:18 pilotlog.txt
[2025-11-30 15:18:41] -rw------- 1 boinc boinc   4075415 Nov 30 15:18 log.47556161._005161.job.log.1
[2025-11-30 15:18:41] -rw------- 1 boinc boinc       353 Nov 30 15:18 output.list
[2025-11-30 15:18:41] -rw-r--r-- 1 boinc boinc       620 Nov 30 15:18 runtime_log
[2025-11-30 15:18:41] -rw------- 1 boinc boinc   5253120 Nov 30 15:18 result.tar.gz
[2025-11-30 15:18:41] -rw-r--r-- 1 boinc boinc      8918 Nov 30 15:18 runtime_log.err
[2025-11-30 15:18:41] -rw------- 1 boinc boinc       669 Nov 30 15:18 8xpNDmsGWi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmUyJKDmfcohKn.diag
[2025-11-30 15:18:41] -rw-r--r-- 1 boinc boinc     21256 Nov 30 15:18 stderr.txt
[2025-11-30 15:18:41] HITS file was successfully produced:
[2025-11-30 15:18:41] -rw------- 1 boinc boinc 922997184 Nov 30 15:17 shared/HITS.pool.root.1
[2025-11-30 15:18:41]  *** Contents of shared directory: ***
[2025-11-30 15:18:41] total 1307120
[2025-11-30 15:18:41] -rw-r--r-- 2 boinc boinc 409615121 Nov 30 07:14 ATLAS.root_0
[2025-11-30 15:18:41] -rw-r--r-- 2 boinc boinc    590100 Nov 30 07:14 input.tar.gz
[2025-11-30 15:18:41] -rw-r--r-- 2 boinc boinc     15847 Nov 30 07:14 start_atlas.sh
[2025-11-30 15:18:41] -rw------- 1 boinc boinc 922997184 Nov 30 15:17 HITS.pool.root.1
[2025-11-30 15:18:41] -rw------- 1 boinc boinc   5253120 Nov 30 15:18 result.tar.gz
15:18:42 (3832072): run_atlas exited; CPU time 85476.457993
15:18:42 (3832072): called boinc_finish(0)

</stderr_txt>
]]>

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