Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:51:22 (718201): wrapper (7.7.26015): starting
02:51:22 (718201): wrapper: running run_atlas (--nthreads 12)
[2025-11-27 02:51:22] Arguments: --nthreads 12
[2025-11-27 02:51:22] Threads: 12
[2025-11-27 02:51:22] Checking for CVMFS
[2025-11-27 02:51:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 02:51:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 02:51:23] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 02:51:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 02:51:24] 2.11.5.0 1708977 29408 207320 153360 2 426 29326017 45568000 20734 130560 0 293764513 99.797 170089182 24902 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-27 02:51:24] CVMFS is ok
[2025-11-27 02:51:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 02:51:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 02:51:24] Further information can be found at the LHC@home message board.
[2025-11-27 02:51:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 02:51:24] Checking for apptainer binary...
[2025-11-27 02:51:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 02:51:24] Running /usr/bin/apptainer --version
[2025-11-27 02:51:25] apptainer version 1.4.1-1.el9
[2025-11-27 02:51:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 02:51:26] wns0085.triumf.lcg
[2025-11-27 02:51:26] apptainer works
[2025-11-27 02:51:26] Set ATHENA_PROC_NUMBER=12
[2025-11-27 02:51:26] Set ATHENA_CORE_NUMBER=12
[2025-11-27 02:51:26] Starting ATLAS job with PandaID=6898723853
[2025-11-27 02:51:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 02:59:25]  *** The last 200 lines of the pilot log: ***
[2025-11-27 02:59:25] 2025-11-27 10:58:14,734 | INFO     | ..............................
[2025-11-27 02:59:25] 2025-11-27 10:58:14,734 | INFO     | . Timing measurements:
[2025-11-27 02:59:25] 2025-11-27 10:58:14,734 | INFO     | . get job = 0 s
[2025-11-27 02:59:25] 2025-11-27 10:58:14,735 | INFO     | . initial setup = 5 s
[2025-11-27 02:59:25] 2025-11-27 10:58:14,735 | INFO     | . payload setup = 31 s
[2025-11-27 02:59:25] 2025-11-27 10:58:14,735 | INFO     | . stage-in = 0 s
[2025-11-27 02:59:25] 2025-11-27 10:58:14,735 | INFO     | . payload execution = 144 s
[2025-11-27 02:59:25] 2025-11-27 10:58:14,735 | INFO     | . stage-out = 1 s
[2025-11-27 02:59:25] 2025-11-27 10:58:14,735 | INFO     | . log creation = 0 s
[2025-11-27 02:59:25] 2025-11-27 10:58:14,735 | INFO     | ..............................
[2025-11-27 02:59:25] 2025-11-27 10:58:14,735 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-27 02:59:25] 2025-11-27 10:58:14,735 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6898723853/pilotlog.txt
[2025-11-27 02:59:25] 2025-11-27 10:58:14,761 | INFO     | time since job start (356s) is within the limit (172800.0s)
[2025-11-27 02:59:25] 2025-11-27 10:58:14,812 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-27 02:59:25] - Log from pilotlog.txt -
[2025-11-27 02:59:25] 2025-11-27 10:58:14,733 | INFO     | extracted standard info from prmon json
[2025-11-27 02:59:25] 2025-11-27 10:58:14,733 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 02:59:25] 2025-11-27 10:58:14,733 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 02:59:25] 2025-11-27 10:58:14,733 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-27 02:59:25] 2025-11-27 10:58:14,733 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-27 02:59:25] 2025-11-27 10:58:14,734 | WARNING  | wrong length of table data, x=[1764240854.0, 1764240915.0], y=[2197.0, 690153.0] (must be same and length>=4)
[2025-11-27 02:59:25] 2025-11-27 10:58:14,734 | INFO     | could have reported an average CPU frequency of 2674 MHz (4 samples)
[2025-11-27 02:59:25] 2025-11-27 10:58:14,734 | INFO     | ..............................
[2025-11-27 02:59:25] 2025-11-27 10:58:14,734 | INFO     | . Timing measurements:
[2025-11-27 02:59:25] 2025-11-27 10:58:14,734 | INFO     | . get job = 0 s
[2025-11-27 02:59:25] 2025-11-27 10:58:14,735 | INFO     | . initial setup = 5 s
[2025-11-27 02:59:25] 2025-11-27 10:58:14,735 | INFO     | . payload setup = 31 s
[2025-11-27 02:59:25] 2025-11-27 10:58:14,735 | INFO     | . stage-in = 0 s
[2025-11-27 02:59:25] 2025-11-27 10:58:14,735 | INFO     | . payload execution = 144 s
[2025-11-27 02:59:25] 2025-11-27 10:58:14,735 | INFO     | . stage-out = 1 s
[2025-11-27 02:59:25] 2025-11-27 10:58:14,735 | INFO     | . log creation = 0 s
[2025-11-27 02:59:25] 2025-11-27 10:58:14,735 | INFO     | ..............................
[2025-11-27 02:59:25] 2025-11-27 10:58:14,735 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-27 02:59:25] 2025-11-27 10:58:14,735 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6898723853/pilotlog.txt
[2025-11-27 02:59:25] 2025-11-27 10:58:14,761 | INFO     | time since job start (356s) is within the limit (172800.0s)
[2025-11-27 02:59:25] 2025-11-27 10:58:14,813 | WARNING  | 
[2025-11-27 02:59:25] [begin log extracts]
[2025-11-27 02:59:25] - Log from pilotlog.txt -
[2025-11-27 02:59:25] 2025-11-27 10:58:14,733 | INFO     | extracted standard info from prmon json
[2025-11-27 02:59:25] 2025-11-27 10:58:14,733 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 02:59:25] 2025-11-27 10:58:14,733 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 02:59:25] 2025-11-27 10:58:14,733 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-27 02:59:25] 2025-11-27 10:58:14,733 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-27 02:59:25] 2025-11-27 10:58:14,734 | WARNING  | wrong length of table data, x=[1764240854.0, 1764240915.0], y=[2197.0, 690153.0] (must be same and length>=4)
[2025-11-27 02:59:25] 2025-11-27 10:58:14,734 | INFO     | could have reported an average CPU frequency of 2674 MHz (4 samples)
[2025-11-27 02:59:25] 2025-11-27 10:58:14,734 | INFO     | ..............................
[2025-11-27 02:59:25] 2025-11-27 10:58:14,734 | INFO     | . Timing measurements:
[2025-11-27 02:59:25] 2025-11-27 10:58:14,734 | INFO     | . get job = 0 s
[2025-11-27 02:59:25] 2025-11-27 10:58:14,735 | INFO     | . initial setup = 5 s
[2025-11-27 02:59:25] 2025-11-27 10:58:14,735 | INFO     | . payload setup = 31 s
[2025-11-27 02:59:25] 2025-11-27 10:58:14,735 | INFO     | . stage-in = 0 s
[2025-11-27 02:59:25] 2025-11-27 10:58:14,735 | INFO     | . payload execution = 144 s
[2025-11-27 02:59:25] 2025-11-27 10:58:14,735 | INFO     | . stage-out = 1 s
[2025-11-27 02:59:25] 2025-11-27 10:58:14,735 | INFO     | . log creation = 0 s
[2025-11-27 02:59:25] 2025-11-27 10:58:14,735 | INFO     | ..............................
[2025-11-27 02:59:25] 2025-11-27 10:58:14,735 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-27 02:59:25] 2025-11-27 10:58:14,735 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6898723853/pilotlog.txt
[2025-11-27 02:59:25] 2025-11-27 10:58:14,761 | INFO     | time since job start (356s) is within the limit (172800.0s)
[2025-11-27 02:59:25] [end log extracts]
[2025-11-27 02:59:25] 2025-11-27 10:58:14,813 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-27 02:59:25] 2025-11-27 10:58:14,813 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-27 02:59:25] 2025-11-27 10:58:15,393 | INFO     | 
[2025-11-27 02:59:25] 2025-11-27 10:58:15,393 | INFO     | job summary report
[2025-11-27 02:59:25] 2025-11-27 10:58:15,394 | INFO     | --------------------------------------------------
[2025-11-27 02:59:25] 2025-11-27 10:58:15,394 | INFO     | PanDA job id: 6898723853
[2025-11-27 02:59:25] 2025-11-27 10:58:15,394 | INFO     | task id: 47556161
[2025-11-27 02:59:25] 2025-11-27 10:58:15,394 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-27 02:55:55,336 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-27 02:59:25] 2025-11-27 10:58:15,394 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-27 02:59:25] 2025-11-27 10:58:15,394 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 02:59:25] 2025-11-27 10:58:15,394 | INFO     | pilot state: failed 
[2025-11-27 02:59:25] 2025-11-27 10:58:15,394 | INFO     | transexitcode: 65
[2025-11-27 02:59:25] 2025-11-27 10:58:15,394 | INFO     | exeerrorcode: 65
[2025-11-27 02:59:25] 2025-11-27 10:58:15,394 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-27 02:59:25] 2025-11-27 10:58:15,394 | INFO     | exitcode: 65
[2025-11-27 02:59:25] 2025-11-27 10:58:15,394 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-27 02:59:25] 2025-11-27 10:58:15,394 | INFO     | cpuconsumptiontime: 44 s
[2025-11-27 02:59:25] 2025-11-27 10:58:15,394 | INFO     | nevents: 0
[2025-11-27 02:59:25] 2025-11-27 10:58:15,394 | INFO     | neventsw: 0
[2025-11-27 02:59:25] 2025-11-27 10:58:15,394 | INFO     | pid: 728949
[2025-11-27 02:59:25] 2025-11-27 10:58:15,394 | INFO     | pgrp: 728949
[2025-11-27 02:59:25] 2025-11-27 10:58:15,394 | INFO     | corecount: 12
[2025-11-27 02:59:25] 2025-11-27 10:58:15,394 | INFO     | event service: False
[2025-11-27 02:59:25] 2025-11-27 10:58:15,394 | INFO     | sizes: {0: 2284085, 1: 2284340, 2: 2284368, 13: 2284368, 21: 2284686, 24: 2284714, 180: 2310290, 181: 2310266, 183: 2314612, 311: 2314750}
[2025-11-27 02:59:25] 2025-11-27 10:58:15,394 | INFO     | --------------------------------------------------
[2025-11-27 02:59:25] 2025-11-27 10:58:15,394 | INFO     | 
[2025-11-27 02:59:25] 2025-11-27 10:58:15,395 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-27 02:59:25] 2025-11-27 10:58:15,443 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 02:59:25] 2025-11-27 10:58:15,443 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 02:59:25] 2025-11-27 10:58:15,443 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 02:59:25] 2025-11-27 10:58:15,443 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 02:59:25] 2025-11-27 10:58:15,443 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 02:59:25] 2025-11-27 10:58:15,443 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 02:59:25] 2025-11-27 10:58:15,443 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 02:59:25] 2025-11-27 10:58:15,443 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 02:59:25] 2025-11-27 10:58:15,443 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 02:59:25] 2025-11-27 10:58:15,443 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 02:59:25] 2025-11-27 10:58:15,443 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 02:59:25] 2025-11-27 10:58:15,443 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 02:59:25] 2025-11-27 10:58:15,443 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 02:59:25] 2025-11-27 10:58:15,444 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 02:59:25] 2025-11-27 10:58:15,444 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 02:59:25] 2025-11-27 10:58:15,444 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 02:59:25] 2025-11-27 10:58:15,444 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 02:59:25] 2025-11-27 10:58:15,444 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 02:59:25] 2025-11-27 10:58:15,444 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 02:59:25] 2025-11-27 10:58:15,444 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 02:59:25] 2025-11-27 10:58:15,444 | INFO     | job 6898723853 has completed (purged errors)
[2025-11-27 02:59:25] 2025-11-27 10:58:15,444 | INFO     | overall cleanup function is called
[2025-11-27 02:59:25] 2025-11-27 10:58:16,455 | INFO     | --- collectZombieJob: --- 10, [728949]
[2025-11-27 02:59:25] 2025-11-27 10:58:16,455 | INFO     | zombie collector waiting for pid 728949
[2025-11-27 02:59:25] 2025-11-27 10:58:16,456 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 02:59:25] 2025-11-27 10:58:16,456 | INFO     | collected zombie processes
[2025-11-27 02:59:25] 2025-11-27 10:58:16,456 | INFO     | will attempt to kill all subprocesses of pid=728949
[2025-11-27 02:59:25] 2025-11-27 10:58:17,067 | INFO     | process IDs to be killed: [728949] (in reverse order)
[2025-11-27 02:59:25] 2025-11-27 10:58:17,405 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 02:59:25] 2025-11-27 10:58:17,405 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 02:59:25] 2025-11-27 10:58:17,416 | INFO     | did not find any defunct processes belonging to 728949
[2025-11-27 02:59:25] 2025-11-27 10:58:17,442 | INFO     | did not find any defunct processes belonging to 728949
[2025-11-27 02:59:25] 2025-11-27 10:58:17,443 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 02:59:25] 2025-11-27 10:58:17,443 | INFO     | ready for new job
[2025-11-27 02:59:25] 2025-11-27 10:58:17,443 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 02:59:25] 2025-11-27 10:58:17,444 | INFO     | ***************************************
[2025-11-27 02:59:25] 2025-11-27 10:58:17,444 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 02:59:25] 2025-11-27 10:58:17,444 | INFO     | ***************************************
[2025-11-27 02:59:25] 2025-11-27 10:58:17,445 | INFO     | 
[2025-11-27 02:59:25] 2025-11-27 10:58:17,451 | INFO     | architecture information:
[2025-11-27 02:59:25] 2025-11-27 10:58:17,451 | INFO     | executing command: cat /etc/os-release
[2025-11-27 02:59:25] 2025-11-27 10:58:17,468 | INFO     | cat /etc/os-release:
[2025-11-27 02:59:25] NAME="CentOS Linux"
[2025-11-27 02:59:25] VERSION="7 (Core)"
[2025-11-27 02:59:25] ID="centos"
[2025-11-27 02:59:25] ID_LIKE="rhel fedora"
[2025-11-27 02:59:25] VERSION_ID="7"
[2025-11-27 02:59:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 02:59:25] ANSI_COLOR="0;31"
[2025-11-27 02:59:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 02:59:25] HOME_URL="https://www.centos.org/"
[2025-11-27 02:59:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 02:59:25] 
[2025-11-27 02:59:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 02:59:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 02:59:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 02:59:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 02:59:25] 
[2025-11-27 02:59:25] 2025-11-27 10:58:17,469 | INFO     | ***************************************
[2025-11-27 02:59:25] 2025-11-27 10:58:17,972 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-27 02:59:25] 2025-11-27 10:58:17,999 | INFO     | sufficient remaining disk space (1750513745920 B)
[2025-11-27 02:59:25] 2025-11-27 10:58:17,999 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 02:59:25] 2025-11-27 10:58:17,999 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 02:59:25] 2025-11-27 10:58:17,999 | INFO     | update_server=False
[2025-11-27 02:59:25] 2025-11-27 10:58:17,999 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 02:59:25] 2025-11-27 10:58:18,053 | INFO     | all job control threads have been joined
[2025-11-27 02:59:25] 2025-11-27 10:58:18,106 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 02:59:25] 2025-11-27 10:58:18,106 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 02:59:25] 2025-11-27 10:58:18,107 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 02:59:25] 2025-11-27 10:58:18,107 | INFO     | will abort loop
[2025-11-27 02:59:25] 2025-11-27 10:58:18,168 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 02:59:25] 2025-11-27 10:58:18,560 | INFO     | all data control threads have been joined
[2025-11-27 02:59:25] 2025-11-27 10:58:19,005 | INFO     | [job] retrieve thread has finished
[2025-11-27 02:59:25] 2025-11-27 10:58:19,014 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 02:59:25] 2025-11-27 10:58:19,059 | INFO     | [job] control thread has finished
[2025-11-27 02:59:25] 2025-11-27 10:58:19,112 | INFO     | [job] job monitor thread has finished
[2025-11-27 02:59:25] 2025-11-27 10:58:19,152 | INFO     | all payload control threads have been joined
[2025-11-27 02:59:25] 2025-11-27 10:58:19,566 | INFO     | [data] control thread has finished
[2025-11-27 02:59:25] 2025-11-27 10:58:19,693 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 02:59:25] 2025-11-27 10:58:19,725 | INFO     | [payload] failed_post thread has finished
[2025-11-27 02:59:25] 2025-11-27 10:58:19,802 | INFO     | [payload] validate_post thread has finished
[2025-11-27 02:59:25] 2025-11-27 10:58:19,828 | INFO     | [job] validate thread has finished
[2025-11-27 02:59:25] 2025-11-27 10:58:19,908 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 02:59:25] 2025-11-27 10:58:19,955 | INFO     | [data] copytool_in thread has finished
[2025-11-27 02:59:25] 2025-11-27 10:58:19,972 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 02:59:25] 2025-11-27 10:58:20,158 | INFO     | [payload] control thread has finished
[2025-11-27 02:59:25] 2025-11-27 10:58:20,177 | INFO     | [data] copytool_out thread has finished
[2025-11-27 02:59:25] 2025-11-27 10:58:20,356 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 02:59:25] 2025-11-27 10:58:20,449 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 02:59:25] 2025-11-27 10:58:20,977 | INFO     | [job] queue monitor thread has finished
[2025-11-27 02:59:25] 2025-11-27 10:58:23,711 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 02:59:25] 2025-11-27 10:58:48,082 | INFO     | PID=722084 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 02:59:25] 2025-11-27 10:58:48,082 | INFO     | .. there are 34 such processes running
[2025-11-27 02:59:25] 2025-11-27 10:58:48,082 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 02:59:25] 2025-11-27 10:58:48,083 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 02:59:25] 2025-11-27 10:58:48,083 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 02:59:25] 2025-11-27 10:59:18,054 | INFO     | [monitor] cgroup control has ended
[2025-11-27 02:59:25] 2025-11-27 10:59:19,521 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140380132136768)>', '<ExcThread(monitor, started 140379437385472)>']
[2025-11-27 02:59:25] 2025-11-27 10:59:20,294 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 02:59:25] 2025-11-27 10:59:20,294 | INFO     | [monitor] control thread has ended
[2025-11-27 02:59:25] 2025-11-27 10:59:24,547 | INFO     | all workflow threads have been joined
[2025-11-27 02:59:25] 2025-11-27 10:59:24,547 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 02:59:25] 2025-11-27 10:59:24,548 | INFO     | traces error code: 0
[2025-11-27 02:59:25] 2025-11-27 10:59:24,548 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 02:59:25] 2025-11-27 10:59:24,992 [wrapper] ==== pilot stdout END ====
[2025-11-27 02:59:25] 2025-11-27 10:59:24,994 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 02:59:25] 2025-11-27 10:59:24,996 [wrapper] pilotpid: 722084
[2025-11-27 02:59:25] 2025-11-27 10:59:24,998 [wrapper] Pilot exit status: 0
[2025-11-27 02:59:25] 2025-11-27 10:59:25,038 [wrapper] pandaids: 6898723853
[2025-11-27 02:59:25] 2025-11-27 10:59:25,429 [wrapper] cleanup supervisor_pilot  722090 722085
[2025-11-27 02:59:25] 2025-11-27 10:59:25,439 [wrapper] Test setup, not cleaning
[2025-11-27 02:59:25] 2025-11-27 10:59:25,467 [wrapper] apfmon messages muted
[2025-11-27 02:59:25] 2025-11-27 10:59:25,469 [wrapper] ==== wrapper stdout END ====
[2025-11-27 02:59:25] 2025-11-27 10:59:25,471 [wrapper] ==== wrapper stderr END ====
[2025-11-27 02:59:25]  *** Error codes and diagnostics ***
[2025-11-27 02:59:25]     "exeErrorCode": 65,
[2025-11-27 02:59:25]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-27 02:59:25]     "pilotErrorCode": 1305,
[2025-11-27 02:59:25]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-27 02:59:25]  *** Listing of results directory ***
[2025-11-27 02:59:25] total 403744
[2025-11-27 02:59:25] -rw-r--r--. 1 boinc boinc    576529 Nov 26 14:16 pilot3.tar.gz
[2025-11-27 02:59:25] -rwx------. 1 boinc boinc     36292 Nov 26 15:00 runpilot2-wrapper.sh
[2025-11-27 02:59:25] -rw-r--r--. 1 boinc boinc      5112 Nov 26 15:00 queuedata.json
[2025-11-27 02:59:25] -rw-r--r--. 1 boinc boinc       100 Nov 27 02:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 02:59:25] -rwxr-xr-x. 1 boinc boinc      7986 Nov 27 02:51 run_atlas
[2025-11-27 02:59:25] -rw-r--r--. 1 boinc boinc       105 Nov 27 02:51 job.xml
[2025-11-27 02:59:25] -rw-r--r--. 2 boinc boinc 409198349 Nov 27 02:51 EVNT.47483658._002720.pool.root.1
[2025-11-27 02:59:25] -rw-r--r--. 1 boinc boinc      6596 Nov 27 02:51 init_data.xml
[2025-11-27 02:59:25] -rw-r--r--. 2 boinc boinc     15847 Nov 27 02:51 start_atlas.sh
[2025-11-27 02:59:25] drwxrwx--x. 2 boinc boinc      4096 Nov 27 02:51 shared
[2025-11-27 02:59:25] -rw-r--r--. 2 boinc boinc    590107 Nov 27 02:51 input.tar.gz
[2025-11-27 02:59:25] -rw-r--r--. 1 boinc boinc         0 Nov 27 02:51 boinc_lockfile
[2025-11-27 02:59:25] -rw-r--r--. 1 boinc boinc      2786 Nov 27 02:51 pandaJob.out
[2025-11-27 02:59:25] -rw-------. 1 boinc boinc    991564 Nov 27 02:52 agis_schedconf.cvmfs.json
[2025-11-27 02:59:25] -rw-------. 1 boinc boinc   1516240 Nov 27 02:52 agis_ddmendpoints.agis.ALL.json
[2025-11-27 02:59:25] drwx------. 5 boinc boinc      4096 Nov 27 02:52 pilot3
[2025-11-27 02:59:25] -rw-r--r--. 1 boinc boinc       524 Nov 27 02:55 boinc_task_state.xml
[2025-11-27 02:59:25] -rw-------. 1 boinc boinc       988 Nov 27 02:56 memory_monitor_summary.json
[2025-11-27 02:59:25] -rw-------. 1 boinc boinc     49880 Nov 27 02:56 log.47556161._007030.job.log.tgz.1
[2025-11-27 02:59:25] -rw-------. 1 boinc boinc     10339 Nov 27 02:58 heartbeat.json
[2025-11-27 02:59:25] -rw-------. 1 boinc boinc        95 Nov 27 02:58 pilot_heartbeat.json
[2025-11-27 02:59:25] -rw-r--r--. 1 boinc boinc      8192 Nov 27 02:59 boinc_mmap_file
[2025-11-27 02:59:25] -rw-------. 1 boinc boinc      5008 Nov 27 02:59 pilotlog.txt
[2025-11-27 02:59:25] -rw-r--r--. 1 boinc boinc        23 Nov 27 02:59 wrapper_checkpoint.txt
[2025-11-27 02:59:25] -rw-------. 1 boinc boinc    108258 Nov 27 02:59 log.47556161._007030.job.log.1
[2025-11-27 02:59:25] -rw-------. 1 boinc boinc       186 Nov 27 02:59 output.list
[2025-11-27 02:59:25] -rw-r--r--. 1 boinc boinc       620 Nov 27 02:59 runtime_log
[2025-11-27 02:59:25] -rw-------. 1 boinc boinc    184320 Nov 27 02:59 result.tar.gz
[2025-11-27 02:59:25] -rw-r--r--. 1 boinc boinc      8636 Nov 27 02:59 runtime_log.err
[2025-11-27 02:59:25] -rw-------. 1 boinc boinc       645 Nov 27 02:59 coFLDmYgdi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmOHKKDmyvy9pm.diag
[2025-11-27 02:59:25] -rw-r--r--. 1 boinc boinc     22312 Nov 27 02:59 stderr.txt
[2025-11-27 02:59:26] No HITS result produced
[2025-11-27 02:59:26]  *** Contents of shared directory: ***
[2025-11-27 02:59:26] total 400388
[2025-11-27 02:59:26] -rw-r--r--. 2 boinc boinc 409198349 Nov 27 02:51 ATLAS.root_0
[2025-11-27 02:59:26] -rw-r--r--. 2 boinc boinc     15847 Nov 27 02:51 start_atlas.sh
[2025-11-27 02:59:26] -rw-r--r--. 2 boinc boinc    590107 Nov 27 02:51 input.tar.gz
[2025-11-27 02:59:26] -rw-------. 1 boinc boinc    184320 Nov 27 02:59 result.tar.gz
02:59:27 (718201): run_atlas exited; CPU time 52.343877
02:59:27 (718201): called boinc_finish(0)

</stderr_txt>
]]>

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