Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:18:50 (21027): wrapper (7.7.26015): starting
02:18:50 (21027): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 02:18:50] Arguments: --nthreads 8
[2025-11-27 02:18:50] Threads: 8
[2025-11-27 02:18:50] Checking for CVMFS
[2025-11-27 02:18:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 02:18:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 02:18:51] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 02:18:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 02:18:51] 2.11.2.0 24877 118814 146052 153352 0 49 17428717 18432000 1885 130560 0 86519377 99.975 4914246 31978 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 02:18:51] CVMFS is ok
[2025-11-27 02:18:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 02:18:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 02:18:51] Further information can be found at the LHC@home message board.
[2025-11-27 02:18:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 02:18:51] Checking for apptainer binary...
[2025-11-27 02:18:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 02:18:51] Running /usr/bin/apptainer --version
[2025-11-27 02:18:51] apptainer version 1.3.2-1.el7
[2025-11-27 02:18:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 02:18:52] c-206-3.aglt2.org
[2025-11-27 02:18:52] apptainer works
[2025-11-27 02:18:52] Set ATHENA_PROC_NUMBER=8
[2025-11-27 02:18:52] Set ATHENA_CORE_NUMBER=8
[2025-11-27 02:18:52] Starting ATLAS job with PandaID=6897759713
[2025-11-27 02:18:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 21:20:04]  *** The last 200 lines of the pilot log: ***
[2025-11-27 21:20:04] 2025-11-28 02:19:03,953 | INFO     | time since job start (68399s) is within the limit (172800.0s)
[2025-11-27 21:20:04] 2025-11-28 02:19:05,958 | INFO     | time since job start (68401s) is within the limit (172800.0s)
[2025-11-27 21:20:04] 2025-11-28 02:19:06,163 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 21:20:04] 2025-11-28 02:19:06,166 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2511.2083333333335
[2025-11-27 21:20:04] 2025-11-28 02:19:06,169 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6897759713/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 21:20:04] 2025-11-28 02:19:06,169 | INFO     | extracted standard info from prmon json
[2025-11-27 21:20:04] 2025-11-28 02:19:06,170 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 21:20:04] 2025-11-28 02:19:06,170 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 21:20:04] 2025-11-28 02:19:06,185 | INFO     | fitting pss+swap vs Time
[2025-11-27 21:20:04] 2025-11-28 02:19:06,186 | INFO     | sum of square deviations: 436810673213.2973
[2025-11-27 21:20:04] 2025-11-28 02:19:06,208 | INFO     | sum of deviations: 2091872004075.6672
[2025-11-27 21:20:04] 2025-11-28 02:19:06,208 | INFO     | mean x: 1764262129.6074934
[2025-11-27 21:20:04] 2025-11-28 02:19:06,209 | INFO     | mean y: 2863700.5628902763
[2025-11-27 21:20:04] 2025-11-28 02:19:06,209 | INFO     | intersect: -8446129840.798412
[2025-11-27 21:20:04] 2025-11-28 02:19:06,210 | INFO     | chi2: 5.8862126418009195
[2025-11-27 21:20:04] 2025-11-28 02:19:06,211 | INFO     | sum of square deviations: 430991962511.4433
[2025-11-27 21:20:04] 2025-11-28 02:19:06,238 | INFO     | sum of deviations: 2434971950257.0786
[2025-11-27 21:20:04] 2025-11-28 02:19:06,239 | INFO     | mean x: 1764261977.110215
[2025-11-27 21:20:04] 2025-11-28 02:19:06,239 | INFO     | mean y: 2872690.3001792114
[2025-11-27 21:20:04] 2025-11-28 02:19:06,239 | INFO     | intersect: -9964664528.110031
[2025-11-27 21:20:04] 2025-11-28 02:19:06,240 | INFO     | chi2: 3.1326788303612694
[2025-11-27 21:20:04] 2025-11-28 02:19:06,240 | INFO     | current chi2=3.1326788303612694 (change=46.77938054574241 %)
[2025-11-27 21:20:04] 2025-11-28 02:19:06,241 | INFO     | sum of square deviations: 425225159759.57336
[2025-11-27 21:20:04] 2025-11-28 02:19:06,263 | INFO     | sum of deviations: 2596815543351.3394
[2025-11-27 21:20:04] 2025-11-28 02:19:06,263 | INFO     | mean x: 1764261824.6129613
[2025-11-27 21:20:04] 2025-11-28 02:19:06,263 | INFO     | mean y: 2876967.7542754277
[2025-11-27 21:20:04] 2025-11-28 02:19:06,263 | INFO     | intersect: -10771326824.153847
[2025-11-27 21:20:04] 2025-11-28 02:19:06,264 | INFO     | chi2: 2.4008366746043746
[2025-11-27 21:20:04] 2025-11-28 02:19:06,264 | INFO     | current chi2=2.4008366746043746 (change=23.361544396573102 %)
[2025-11-27 21:20:04] 2025-11-28 02:19:06,264 | INFO     | right removable region: 1110
[2025-11-27 21:20:04] 2025-11-28 02:19:06,265 | INFO     | sum of square deviations: 430991547101.44324
[2025-11-27 21:20:04] 2025-11-28 02:19:06,293 | INFO     | sum of deviations: 1805307149894.6162
[2025-11-27 21:20:04] 2025-11-28 02:19:06,293 | INFO     | mean x: 1764262282.110215
[2025-11-27 21:20:04] 2025-11-28 02:19:06,293 | INFO     | mean y: 2871201.8405017923
[2025-11-27 21:20:04] 2025-11-28 02:19:06,293 | INFO     | intersect: -7387146847.477055
[2025-11-27 21:20:04] 2025-11-28 02:19:06,294 | INFO     | chi2: 3.90331935268334
[2025-11-27 21:20:04] 2025-11-28 02:19:06,294 | INFO     | current chi2=3.90331935268334 (change=33.68708216614652 %)
[2025-11-27 21:20:04] 2025-11-28 02:19:06,295 | INFO     | sum of square deviations: 425224465458.0225
[2025-11-27 21:20:04] 2025-11-28 02:19:06,317 | INFO     | sum of deviations: 1731159295551.1
[2025-11-27 21:20:04] 2025-11-28 02:19:06,317 | INFO     | mean x: 1764262434.6111612
[2025-11-27 21:20:04] 2025-11-28 02:19:06,318 | INFO     | mean y: 2873162.2340234024
[2025-11-27 21:20:04] 2025-11-28 02:19:06,318 | INFO     | intersect: -7179731700.773875
[2025-11-27 21:20:04] 2025-11-28 02:19:06,319 | INFO     | chi2: 3.8511633559695237
[2025-11-27 21:20:04] 2025-11-28 02:19:06,319 | INFO     | current chi2=3.8511633559695237 (change=1.336195991187901 %)
[2025-11-27 21:20:04] 2025-11-28 02:19:06,319 | INFO     | left removable region: 20
[2025-11-27 21:20:04] 2025-11-28 02:19:06,320 | INFO     | sum of square deviations: 401565252654.66516
[2025-11-27 21:20:04] 2025-11-28 02:19:06,344 | INFO     | sum of deviations: 2132592785841.766
[2025-11-27 21:20:04] 2025-11-28 02:19:06,344 | INFO     | mean x: 1764262404.1146789
[2025-11-27 21:20:04] 2025-11-28 02:19:06,344 | INFO     | mean y: 2890197.7458715597
[2025-11-27 21:20:04] 2025-11-28 02:19:06,344 | INFO     | intersect: -9366579024.190067
[2025-11-27 21:20:04] 2025-11-28 02:19:06,345 | INFO     | chi2: 0.2767606516181756
[2025-11-27 21:20:04] 2025-11-28 02:19:06,346 | INFO     | current memory leak: 5.31 B/s (using 1090 data points, chi2=0.28)
[2025-11-27 21:20:04] 2025-11-28 02:19:06,347 | INFO     | could have reported an average CPU frequency of 2630 MHz (41 samples)
[2025-11-27 21:20:04] 2025-11-28 02:19:06,347 | INFO     | ..............................
[2025-11-27 21:20:04] 2025-11-28 02:19:06,347 | INFO     | . Timing measurements:
[2025-11-27 21:20:04] 2025-11-28 02:19:06,347 | INFO     | . get job = 0 s
[2025-11-27 21:20:04] 2025-11-28 02:19:06,347 | INFO     | . initial setup = 2 s
[2025-11-27 21:20:04] 2025-11-28 02:19:06,348 | INFO     | . payload setup = 5 s
[2025-11-27 21:20:04] 2025-11-28 02:19:06,348 | INFO     | . stage-in = 0 s
[2025-11-27 21:20:04] 2025-11-28 02:19:06,348 | INFO     | . payload execution = 68370 s
[2025-11-27 21:20:04] 2025-11-28 02:19:06,348 | INFO     | . stage-out = 3 s
[2025-11-27 21:20:04] 2025-11-28 02:19:06,348 | INFO     | . log creation = 0 s
[2025-11-27 21:20:04] 2025-11-28 02:19:06,348 | INFO     | ..............................
[2025-11-27 21:20:04] 2025-11-28 02:19:06,606 | INFO     | 
[2025-11-27 21:20:04] 2025-11-28 02:19:06,606 | INFO     | job summary report
[2025-11-27 21:20:04] 2025-11-28 02:19:06,606 | INFO     | --------------------------------------------------
[2025-11-27 21:20:04] 2025-11-28 02:19:06,607 | INFO     | PanDA job id: 6897759713
[2025-11-27 21:20:04] 2025-11-28 02:19:06,607 | INFO     | task id: 47556173
[2025-11-27 21:20:04] 2025-11-28 02:19:06,607 | INFO     | errors: (none)
[2025-11-27 21:20:04] 2025-11-28 02:19:06,607 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 21:20:04] 2025-11-28 02:19:06,607 | INFO     | pilot state: finished 
[2025-11-27 21:20:04] 2025-11-28 02:19:06,608 | INFO     | transexitcode: 0
[2025-11-27 21:20:04] 2025-11-28 02:19:06,608 | INFO     | exeerrorcode: 0
[2025-11-27 21:20:04] 2025-11-28 02:19:06,608 | INFO     | exeerrordiag: 
[2025-11-27 21:20:04] 2025-11-28 02:19:06,608 | INFO     | exitcode: 0
[2025-11-27 21:20:04] 2025-11-28 02:19:06,608 | INFO     | exitmsg: OK
[2025-11-27 21:20:04] 2025-11-28 02:19:06,608 | INFO     | cpuconsumptiontime: 529235 s
[2025-11-27 21:20:04] 2025-11-28 02:19:06,609 | INFO     | nevents: 1000
[2025-11-27 21:20:04] 2025-11-28 02:19:06,609 | INFO     | neventsw: 0
[2025-11-27 21:20:04] 2025-11-28 02:19:06,609 | INFO     | pid: 31469
[2025-11-27 21:20:04] 2025-11-28 02:19:06,609 | INFO     | pgrp: 31469
[2025-11-27 21:20:04] 2025-11-28 02:19:06,609 | INFO     | corecount: 8
[2025-11-27 21:20:04] 2025-11-28 02:19:06,609 | INFO     | event service: False
[2025-11-27 21:20:04] 2025-11-28 02:19:06,610 | INFO     | sizes: {0: 2284036, 1: 2284291, 4: 2284553, 12: 2284581, 68379: 2340530, 68380: 2340529, 68384: 2349763, 68388: 2350049}
[2025-11-27 21:20:04] 2025-11-28 02:19:06,610 | INFO     | --------------------------------------------------
[2025-11-27 21:20:04] 2025-11-28 02:19:06,610 | INFO     | 
[2025-11-27 21:20:04] 2025-11-28 02:19:06,610 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-27 21:20:04] 2025-11-28 02:19:06,628 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 21:20:04] 2025-11-28 02:19:06,628 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 21:20:04] 2025-11-28 02:19:06,628 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 21:20:04] 2025-11-28 02:19:06,629 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 21:20:04] 2025-11-28 02:19:06,629 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 21:20:04] 2025-11-28 02:19:06,629 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 21:20:04] 2025-11-28 02:19:06,629 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 21:20:04] 2025-11-28 02:19:06,629 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 21:20:04] 2025-11-28 02:19:06,629 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 21:20:04] 2025-11-28 02:19:06,630 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 21:20:04] 2025-11-28 02:19:06,630 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 21:20:04] 2025-11-28 02:19:06,630 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 21:20:04] 2025-11-28 02:19:06,630 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 21:20:04] 2025-11-28 02:19:06,630 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 21:20:04] 2025-11-28 02:19:06,631 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 21:20:04] 2025-11-28 02:19:06,631 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 21:20:04] 2025-11-28 02:19:06,631 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 21:20:04] 2025-11-28 02:19:06,631 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 21:20:04] 2025-11-28 02:19:06,631 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 21:20:04] 2025-11-28 02:19:06,631 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 21:20:04] 2025-11-28 02:19:06,632 | INFO     | job 6897759713 has completed (purged errors)
[2025-11-27 21:20:04] 2025-11-28 02:19:06,632 | INFO     | overall cleanup function is called
[2025-11-27 21:20:04] 2025-11-28 02:19:07,412 [wrapper] supervise_pilot (15 min periods counter: 77)
[2025-11-27 21:20:04] 2025-11-28 02:19:07,649 | INFO     | --- collectZombieJob: --- 10, [31469]
[2025-11-27 21:20:04] 2025-11-28 02:19:07,649 | INFO     | zombie collector waiting for pid 31469
[2025-11-27 21:20:04] 2025-11-28 02:19:07,649 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 21:20:04] 2025-11-28 02:19:07,650 | INFO     | collected zombie processes
[2025-11-27 21:20:04] 2025-11-28 02:19:07,650 | INFO     | will attempt to kill all subprocesses of pid=31469
[2025-11-27 21:20:04] 2025-11-28 02:19:07,825 | INFO     | process IDs to be killed: [31469] (in reverse order)
[2025-11-27 21:20:04] 2025-11-28 02:19:07,891 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 21:20:04] 2025-11-28 02:19:07,892 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 21:20:04] 2025-11-28 02:19:07,894 | INFO     | did not find any defunct processes belonging to 31469
[2025-11-27 21:20:04] 2025-11-28 02:19:07,897 | INFO     | did not find any defunct processes belonging to 31469
[2025-11-27 21:20:04] 2025-11-28 02:19:07,898 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 21:20:04] 2025-11-28 02:19:07,898 | INFO     | ready for new job
[2025-11-27 21:20:04] 2025-11-28 02:19:07,899 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 21:20:04] 2025-11-28 02:19:07,902 | INFO     | ***************************************
[2025-11-27 21:20:04] 2025-11-28 02:19:07,902 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 21:20:04] 2025-11-28 02:19:07,902 | INFO     | ***************************************
[2025-11-27 21:20:04] 2025-11-28 02:19:07,902 | INFO     | 
[2025-11-27 21:20:04] 2025-11-28 02:19:07,903 | INFO     | architecture information:
[2025-11-27 21:20:04] 2025-11-28 02:19:07,904 | INFO     | executing command: cat /etc/os-release
[2025-11-27 21:20:04] 2025-11-28 02:19:07,913 | INFO     | cat /etc/os-release:
[2025-11-27 21:20:04] NAME="CentOS Linux"
[2025-11-27 21:20:04] VERSION="7 (Core)"
[2025-11-27 21:20:04] ID="centos"
[2025-11-27 21:20:04] ID_LIKE="rhel fedora"
[2025-11-27 21:20:04] VERSION_ID="7"
[2025-11-27 21:20:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 21:20:04] ANSI_COLOR="0;31"
[2025-11-27 21:20:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 21:20:04] HOME_URL="https://www.centos.org/"
[2025-11-27 21:20:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 21:20:04] 
[2025-11-27 21:20:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 21:20:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 21:20:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 21:20:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 21:20:04] 
[2025-11-27 21:20:04] 2025-11-28 02:19:07,914 | INFO     | ***************************************
[2025-11-27 21:20:04] 2025-11-28 02:19:08,416 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-27 21:20:04] 2025-11-28 02:19:08,435 | INFO     | sufficient remaining disk space (25950158848 B)
[2025-11-27 21:20:04] 2025-11-28 02:19:08,435 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 21:20:04] 2025-11-28 02:19:08,435 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 21:20:04] 2025-11-28 02:19:08,436 | INFO     | update_server=False
[2025-11-27 21:20:04] 2025-11-28 02:19:08,436 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 21:20:04] 2025-11-28 02:19:08,436 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 21:20:04] 2025-11-28 02:19:08,436 | INFO     | aborting loop
[2025-11-27 21:20:04] 2025-11-28 02:19:08,437 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 21:20:04] 2025-11-28 02:19:08,437 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 21:20:04] 2025-11-28 02:19:08,700 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 21:20:04] 2025-11-28 02:19:08,844 | INFO     | all payload control threads have been joined
[2025-11-27 21:20:04] 2025-11-28 02:19:08,861 | INFO     | all data control threads have been joined
[2025-11-27 21:20:04] 2025-11-28 02:19:08,993 | INFO     | all job control threads have been joined
[2025-11-27 21:20:04] 2025-11-28 02:19:09,441 | INFO     | [job] retrieve thread has finished
[2025-11-27 21:20:04] 2025-11-28 02:19:09,442 | INFO     | [job] job monitor thread has finished
[2025-11-27 21:20:04] 2025-11-28 02:19:09,442 | INFO     | [job] queue monitor thread has finished
[2025-11-27 21:20:04] 2025-11-28 02:19:09,534 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 21:20:04] 2025-11-28 02:19:09,772 | INFO     | [job] validate thread has finished
[2025-11-27 21:20:04] 2025-11-28 02:19:09,850 | INFO     | [payload] control thread has finished
[2025-11-27 21:20:04] 2025-11-28 02:19:09,866 | INFO     | [data] control thread has finished
[2025-11-27 21:20:04] 2025-11-28 02:19:09,885 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 21:20:04] 2025-11-28 02:19:09,961 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 21:20:04] 2025-11-28 02:19:09,999 | INFO     | [job] control thread has finished
[2025-11-27 21:20:04] 2025-11-28 02:19:10,404 | INFO     | [data] copytool_in thread has finished
[2025-11-27 21:20:04] 2025-11-28 02:19:10,442 | INFO     | [data] copytool_out thread has finished
[2025-11-27 21:20:04] 2025-11-28 02:19:10,555 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 21:20:04] 2025-11-28 02:19:10,748 | INFO     | [payload] validate_post thread has finished
[2025-11-27 21:20:04] 2025-11-28 02:19:10,888 | INFO     | [payload] failed_post thread has finished
[2025-11-27 21:20:04] 2025-11-28 02:19:12,706 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 21:20:04] 2025-11-28 02:19:39,232 | INFO     | PID=25021 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 21:20:04] 2025-11-28 02:19:39,232 | INFO     | .. there are 3 such processes running
[2025-11-27 21:20:04] 2025-11-28 02:19:39,233 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 21:20:04] 2025-11-28 02:19:39,233 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 21:20:04] 2025-11-28 02:19:39,233 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 21:20:04] 2025-11-28 02:19:57,019 | INFO     | [monitor] cgroup control has ended
[2025-11-27 21:20:04] 2025-11-28 02:19:58,756 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139760856250176)>', '<ExcThread(monitor, started 139760408438528)>']
[2025-11-27 21:20:04] 2025-11-28 02:19:59,339 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 21:20:04] 2025-11-28 02:19:59,339 | INFO     | [monitor] control thread has ended
[2025-11-27 21:20:04] 2025-11-28 02:20:03,781 | INFO     | all workflow threads have been joined
[2025-11-27 21:20:04] 2025-11-28 02:20:03,781 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 21:20:04] 2025-11-28 02:20:03,781 | INFO     | traces error code: 0
[2025-11-27 21:20:04] 2025-11-28 02:20:03,782 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 21:20:04] 2025-11-28 02:20:03,931 [wrapper] ==== pilot stdout END ====
[2025-11-27 21:20:04] 2025-11-28 02:20:03,933 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 21:20:04] 2025-11-28 02:20:03,936 [wrapper] pilotpid: 25021
[2025-11-27 21:20:04] 2025-11-28 02:20:03,938 [wrapper] Pilot exit status: 0
[2025-11-27 21:20:04] 2025-11-28 02:20:03,948 [wrapper] pandaids: 6897759713
[2025-11-27 21:20:04] 2025-11-28 02:20:03,991 [wrapper] cleanup supervisor_pilot  3508 25022
[2025-11-27 21:20:04] 2025-11-28 02:20:03,993 [wrapper] Test setup, not cleaning
[2025-11-27 21:20:04] 2025-11-28 02:20:03,996 [wrapper] apfmon messages muted
[2025-11-27 21:20:04] 2025-11-28 02:20:03,998 [wrapper] ==== wrapper stdout END ====
[2025-11-27 21:20:04] 2025-11-28 02:20:04,001 [wrapper] ==== wrapper stderr END ====
[2025-11-27 21:20:04]  *** Error codes and diagnostics ***
[2025-11-27 21:20:04]     "exeErrorCode": 0,
[2025-11-27 21:20:04]     "exeErrorDiag": "",
[2025-11-27 21:20:04]     "pilotErrorCode": 0,
[2025-11-27 21:20:04]     "pilotErrorDiag": "",
[2025-11-27 21:20:04]  *** Listing of results directory ***
[2025-11-27 21:20:04] total 1318040
[2025-11-27 21:20:04] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 21:20:04] -rwx------ 1 boincer umatlas     36292 Nov 25 12:02 runpilot2-wrapper.sh
[2025-11-27 21:20:04] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 12:02 queuedata.json
[2025-11-27 21:20:04] -rw-r--r-- 1 boincer umatlas       100 Nov 27 02:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 21:20:04] -rwxr-xr-x 1 boincer umatlas      7986 Nov 27 02:18 run_atlas
[2025-11-27 21:20:04] -rw-r--r-- 1 boincer umatlas       105 Nov 27 02:18 job.xml
[2025-11-27 21:20:04] -rw-r--r-- 2 boincer umatlas 410269259 Nov 27 02:18 EVNT.47483658._003121.pool.root.1
[2025-11-27 21:20:04] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 02:18 start_atlas.sh
[2025-11-27 21:20:04] drwxrwx--x 2 boincer umatlas      4096 Nov 27 02:18 shared
[2025-11-27 21:20:04] -rw-r--r-- 2 boincer umatlas    590111 Nov 27 02:18 input.tar.gz
[2025-11-27 21:20:04] -rw-r--r-- 1 boincer umatlas         0 Nov 27 02:18 boinc_lockfile
[2025-11-27 21:20:04] -rw-r--r-- 1 boincer umatlas      2785 Nov 27 02:18 pandaJob.out
[2025-11-27 21:20:04] -rw------- 1 boincer umatlas        57 Nov 27 02:18 setup.sh.local
[2025-11-27 21:20:04] -rw------- 1 boincer umatlas    991570 Nov 27 02:19 agis_schedconf.cvmfs.json
[2025-11-27 21:20:04] drwx------ 5 boincer umatlas      4096 Nov 27 02:19 pilot3
[2025-11-27 21:20:04] -rw-r--r-- 1 boincer umatlas       533 Nov 27 21:05 boinc_task_state.xml
[2025-11-27 21:20:04] -rw-r--r-- 1 boincer umatlas      5953 Nov 27 21:09 init_data.xml
[2025-11-27 21:20:04] -rw------- 1 boincer umatlas 911963725 Nov 27 21:18 HITS.47556173._000906.pool.root.1
[2025-11-27 21:20:04] -rw------- 1 boincer umatlas      1067 Nov 27 21:18 memory_monitor_summary.json
[2025-11-27 21:20:04] -rw------- 1 boincer umatlas   1516240 Nov 27 21:19 agis_ddmendpoints.agis.ALL.json
[2025-11-27 21:20:04] -rw------- 1 boincer umatlas   2293235 Nov 27 21:19 log.47556173._000906.job.log.tgz.1
[2025-11-27 21:20:04] -rw------- 1 boincer umatlas      8659 Nov 27 21:19 heartbeat.json
[2025-11-27 21:20:04] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 21:19 boinc_mmap_file
[2025-11-27 21:20:04] -rw-r--r-- 1 boincer umatlas        29 Nov 27 21:19 wrapper_checkpoint.txt
[2025-11-27 21:20:04] -rw------- 1 boincer umatlas        95 Nov 27 21:19 pilot_heartbeat.json
[2025-11-27 21:20:04] -rw------- 1 boincer umatlas      4821 Nov 27 21:20 pilotlog.txt
[2025-11-27 21:20:04] -rw------- 1 boincer umatlas   9467175 Nov 27 21:20 log.47556173._000906.job.log.1
[2025-11-27 21:20:04] -rw------- 1 boincer umatlas       353 Nov 27 21:20 output.list
[2025-11-27 21:20:04] -rw-r--r-- 1 boincer umatlas       620 Nov 27 21:20 runtime_log
[2025-11-27 21:20:04] -rw------- 1 boincer umatlas  11776000 Nov 27 21:20 result.tar.gz
[2025-11-27 21:20:04] -rw-r--r-- 1 boincer umatlas      9338 Nov 27 21:20 runtime_log.err
[2025-11-27 21:20:04] -rw------- 1 boincer umatlas       667 Nov 27 21:20 62jNDmlbBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJfMKDmNmmgqn.diag
[2025-11-27 21:20:04] -rw-r--r-- 1 boincer umatlas     21275 Nov 27 21:20 stderr.txt
[2025-11-27 21:20:04] HITS file was successfully produced:
[2025-11-27 21:20:04] -rw------- 1 boincer umatlas 911963725 Nov 27 21:18 shared/HITS.pool.root.1
[2025-11-27 21:20:04]  *** Contents of shared directory: ***
[2025-11-27 21:20:04] total 1303352
[2025-11-27 21:20:04] -rw-r--r-- 2 boincer umatlas 410269259 Nov 27 02:18 ATLAS.root_0
[2025-11-27 21:20:04] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 02:18 start_atlas.sh
[2025-11-27 21:20:04] -rw-r--r-- 2 boincer umatlas    590111 Nov 27 02:18 input.tar.gz
[2025-11-27 21:20:04] -rw------- 1 boincer umatlas 911963725 Nov 27 21:18 HITS.pool.root.1
[2025-11-27 21:20:04] -rw------- 1 boincer umatlas  11776000 Nov 27 21:20 result.tar.gz
21:20:05 (21027): run_atlas exited; CPU time 528345.392051
21:20:05 (21027): called boinc_finish(0)

</stderr_txt>
]]>

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