Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:52:50 (3315395): wrapper (7.7.26015): starting
08:52:50 (3315395): wrapper: running run_atlas (--nthreads 3)
[2025-11-27 08:52:50] Arguments: --nthreads 3
[2025-11-27 08:52:50] Threads: 3
[2025-11-27 08:52:50] Checking for CVMFS
[2025-11-27 08:52:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 08:52:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 08:52:50] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 08:52:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 08:52:50] 2.9.2.0 3252557 13 50304 153353 2 88 35931213 36864000 0 130560 0 187837 100.000 2 285 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 08:52:50] CVMFS is ok
[2025-11-27 08:52:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 08:52:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 08:52:50] Further information can be found at the LHC@home message board.
[2025-11-27 08:52:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 08:52:50] Checking for apptainer binary...
[2025-11-27 08:52:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 08:52:50] Running /usr/bin/apptainer --version
[2025-11-27 08:52:50] apptainer version 1.4.1-1.1
[2025-11-27 08:52:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 08:52:50] thA335
[2025-11-27 08:52:50] apptainer works
[2025-11-27 08:52:50] Set ATHENA_PROC_NUMBER=3
[2025-11-27 08:52:50] Set ATHENA_CORE_NUMBER=3
[2025-11-27 08:52:50] Starting ATLAS job with PandaID=6898214515
[2025-11-27 08:52:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 08:57:08]  *** The last 200 lines of the pilot log: ***
[2025-11-27 08:57:08] 2025-11-27 07:56:13,084 | INFO     | cat /etc/os-release:
[2025-11-27 08:57:08] NAME="CentOS Linux"
[2025-11-27 08:57:08] VERSION="7 (Core)"
[2025-11-27 08:57:08] ID="centos"
[2025-11-27 08:57:08] ID_LIKE="rhel fedora"
[2025-11-27 08:57:08] VERSION_ID="7"
[2025-11-27 08:57:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 08:57:08] ANSI_COLOR="0;31"
[2025-11-27 08:57:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 08:57:08] HOME_URL="https://www.centos.org/"
[2025-11-27 08:57:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 08:57:08] 
[2025-11-27 08:57:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 08:57:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 08:57:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 08:57:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 08:57:08] 
[2025-11-27 08:57:08] 2025-11-27 07:56:13,084 | INFO     | ***************************************
[2025-11-27 08:57:08] 2025-11-27 07:56:13,588 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-27 08:57:08] 2025-11-27 07:56:13,600 | INFO     | sufficient remaining disk space (826077609984 B)
[2025-11-27 08:57:08] 2025-11-27 07:56:13,600 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 08:57:08] 2025-11-27 07:56:13,600 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 08:57:08] 2025-11-27 07:56:13,601 | INFO     | update_server=False
[2025-11-27 08:57:08] 2025-11-27 07:56:13,601 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 08:57:08] 2025-11-27 07:56:13,601 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 08:57:08] 2025-11-27 07:56:13,601 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-27 08:57:08] 2025-11-27 07:56:13,601 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 08:57:08] 2025-11-27 07:56:13,601 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 08:57:08] 2025-11-27 07:56:13,601 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 08:57:08] 2025-11-27 07:56:13,601 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 08:57:08] 2025-11-27 07:56:13,601 | INFO     | aborting loop
[2025-11-27 08:57:08] 2025-11-27 07:56:14,398 | INFO     | all data control threads have been joined
[2025-11-27 08:57:08] 2025-11-27 07:56:14,419 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 08:57:08] 2025-11-27 07:56:14,606 | INFO     | [job] job monitor thread has finished
[2025-11-27 08:57:08] 2025-11-27 07:56:14,607 | INFO     | [job] retrieve thread has finished
[2025-11-27 08:57:08] 2025-11-27 07:56:14,607 | INFO     | [job] queue monitor thread has finished
[2025-11-27 08:57:08] 2025-11-27 07:56:14,653 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 08:57:08] 2025-11-27 07:56:14,840 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 08:57:08] 2025-11-27 07:56:14,999 | INFO     | all payload control threads have been joined
[2025-11-27 08:57:08] 2025-11-27 07:56:15,212 | INFO     | all job control threads have been joined
[2025-11-27 08:57:08] 2025-11-27 07:56:15,217 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 08:57:08] 2025-11-27 07:56:15,404 | INFO     | [data] control thread has finished
[2025-11-27 08:57:08] 2025-11-27 07:56:15,471 | INFO     | [payload] validate_post thread has finished
[2025-11-27 08:57:08] 2025-11-27 07:56:15,820 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 08:57:08] 2025-11-27 07:56:15,884 | INFO     | [data] copytool_in thread has finished
[2025-11-27 08:57:08] 2025-11-27 07:56:16,005 | INFO     | [payload] control thread has finished
[2025-11-27 08:57:08] 2025-11-27 07:56:16,011 | INFO     | [payload] failed_post thread has finished
[2025-11-27 08:57:08] 2025-11-27 07:56:16,015 | INFO     | [job] validate thread has finished
[2025-11-27 08:57:08] 2025-11-27 07:56:16,102 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 08:57:08] 2025-11-27 07:56:16,218 | INFO     | [job] control thread has finished
[2025-11-27 08:57:08] 2025-11-27 07:56:16,425 | INFO     | [data] copytool_out thread has finished
[2025-11-27 08:57:08] 2025-11-27 07:56:19,224 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 08:57:08] 2025-11-27 07:57:02,253 | INFO     | [monitor] cgroup control has ended
[2025-11-27 08:57:08] 2025-11-27 07:57:03,260 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140069105616704)>', '<ExcThread(monitor, started 140068438124288)>']
[2025-11-27 08:57:08] 2025-11-27 07:57:03,861 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 08:57:08] 2025-11-27 07:57:03,861 | INFO     | [monitor] control thread has ended
[2025-11-27 08:57:08] 2025-11-27 07:57:08,274 | INFO     | all workflow threads have been joined
[2025-11-27 08:57:08] 2025-11-27 07:57:08,274 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 08:57:08] 2025-11-27 07:57:08,275 | INFO     | traces error code: 0
[2025-11-27 08:57:08] 2025-11-27 07:57:08,275 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 08:57:08] 2025-11-27 07:57:08,322 [wrapper] ==== pilot stdout END ====
[2025-11-27 08:57:08] 2025-11-27 07:57:08,325 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 08:57:08] 2025-11-27 07:57:08,328 [wrapper] pilotpid: 3319130
[2025-11-27 08:57:08] 2025-11-27 07:57:08,331 [wrapper] Pilot exit status: 0
[2025-11-27 08:57:08] 2025-11-27 07:57:08,338 [wrapper] pandaids: 6898214515
[2025-11-27 08:57:08] 2025-11-27 07:57:08,356 [wrapper] cleanup supervisor_pilot 3319136 3319131
[2025-11-27 08:57:08] 2025-11-27 07:57:08,359 [wrapper] Test setup, not cleaning
[2025-11-27 08:57:08] 2025-11-27 07:57:08,361 [wrapper] apfmon messages muted
[2025-11-27 08:57:08] 2025-11-27 07:57:08,364 [wrapper] ==== wrapper stdout END ====
[2025-11-27 08:57:08] 2025-11-27 07:57:08,366 [wrapper] ==== wrapper stderr END ====
[2025-11-27 08:57:08]  *** Error codes and diagnostics ***
[2025-11-27 08:57:08]     "exeErrorCode": 65,
[2025-11-27 08:57:08]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-27 08:57:08]     "pilotErrorCode": 1305,
[2025-11-27 08:57:08]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-27 08:57:08]  *** Listing of results directory ***
[2025-11-27 08:57:08] total 404168
[2025-11-27 08:57:08] -rw-r--r-- 1 boinc boinc    576529 Nov 26 05:39 pilot3.tar.gz
[2025-11-27 08:57:08] -rw-r--r-- 1 boinc boinc      5112 Nov 26 05:42 queuedata.json
[2025-11-27 08:57:08] -rwx------ 1 boinc boinc     36292 Nov 26 05:43 runpilot2-wrapper.sh
[2025-11-27 08:57:08] -rw-r--r-- 1 boinc boinc       100 Nov 27 08:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 08:57:08] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 08:52 run_atlas
[2025-11-27 08:57:08] -rw-r--r-- 1 boinc boinc       105 Nov 27 08:52 job.xml
[2025-11-27 08:57:08] -rw-r--r-- 2 boinc boinc 409675790 Nov 27 08:52 EVNT.47483658._002503.pool.root.1
[2025-11-27 08:57:08] -rw-r--r-- 2 boinc boinc    590108 Nov 27 08:52 input.tar.gz
[2025-11-27 08:57:08] -rw-r--r-- 2 boinc boinc     15847 Nov 27 08:52 start_atlas.sh
[2025-11-27 08:57:08] drwxrwx--x 2 boinc boinc      4096 Nov 27 08:52 shared
[2025-11-27 08:57:08] -rw-r--r-- 1 boinc boinc         0 Nov 27 08:52 boinc_setup_complete
[2025-11-27 08:57:08] -rw-r--r-- 1 boinc boinc      6196 Nov 27 08:52 init_data.xml
[2025-11-27 08:57:08] -rw-r--r-- 1 boinc boinc         0 Nov 27 08:52 boinc_lockfile
[2025-11-27 08:57:08] -rw-r--r-- 1 boinc boinc      2785 Nov 27 08:52 pandaJob.out
[2025-11-27 08:57:08] -rw------- 1 boinc boinc    991570 Nov 27 08:53 agis_schedconf.cvmfs.json
[2025-11-27 08:57:08] -rw------- 1 boinc boinc   1516240 Nov 27 08:53 agis_ddmendpoints.agis.ALL.json
[2025-11-27 08:57:08] drwx------ 5 boinc boinc      4096 Nov 27 08:53 pilot3
[2025-11-27 08:57:08] -rw-r--r-- 1 boinc boinc       522 Nov 27 08:53 boinc_task_state.xml
[2025-11-27 08:57:08] -rw------- 1 boinc boinc       977 Nov 27 08:54 memory_monitor_summary.json
[2025-11-27 08:57:08] -rw------- 1 boinc boinc     55584 Nov 27 08:54 log.47556161._004854.job.log.tgz.1
[2025-11-27 08:57:08] -rw------- 1 boinc boinc        95 Nov 27 08:56 pilot_heartbeat.json
[2025-11-27 08:57:08] -rw------- 1 boinc boinc      8397 Nov 27 08:56 heartbeat.json
[2025-11-27 08:57:08] -rw-r--r-- 1 boinc boinc      8192 Nov 27 08:56 boinc_mmap_file
[2025-11-27 08:57:08] -rw-r--r-- 1 boinc boinc        22 Nov 27 08:56 wrapper_checkpoint.txt
[2025-11-27 08:57:08] -rw------- 1 boinc boinc      4556 Nov 27 08:57 pilotlog.txt
[2025-11-27 08:57:08] -rw------- 1 boinc boinc     91550 Nov 27 08:57 log.47556161._004854.job.log.1
[2025-11-27 08:57:08] -rw------- 1 boinc boinc       186 Nov 27 08:57 output.list
[2025-11-27 08:57:08] -rw-r--r-- 1 boinc boinc       620 Nov 27 08:57 runtime_log
[2025-11-27 08:57:08] -rw------- 1 boinc boinc    163840 Nov 27 08:57 result.tar.gz
[2025-11-27 08:57:08] -rw-r--r-- 1 boinc boinc      8744 Nov 27 08:57 runtime_log.err
[2025-11-27 08:57:08] -rw------- 1 boinc boinc       649 Nov 27 08:57 BOnKDmtYMi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4yMKDmC3RbRn.diag
[2025-11-27 08:57:08] -rw-r--r-- 1 boinc boinc      9077 Nov 27 08:57 stderr.txt
[2025-11-27 08:57:08] No HITS result produced
[2025-11-27 08:57:08]  *** Contents of shared directory: ***
[2025-11-27 08:57:08] total 400836
[2025-11-27 08:57:08] -rw-r--r-- 2 boinc boinc 409675790 Nov 27 08:52 ATLAS.root_0
[2025-11-27 08:57:08] -rw-r--r-- 2 boinc boinc    590108 Nov 27 08:52 input.tar.gz
[2025-11-27 08:57:08] -rw-r--r-- 2 boinc boinc     15847 Nov 27 08:52 start_atlas.sh
[2025-11-27 08:57:08] -rw------- 1 boinc boinc    163840 Nov 27 08:57 result.tar.gz
08:57:09 (3315395): run_atlas exited; CPU time 30.576018
08:57:09 (3315395): called boinc_finish(0)

</stderr_txt>
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