Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:53:43 (25015): wrapper (7.7.26015): starting
01:53:43 (25015): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 01:53:43] Arguments: --nthreads 8
[2025-11-27 01:53:43] Threads: 8
[2025-11-27 01:53:43] Checking for CVMFS
[2025-11-27 01:53:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 01:53:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 01:53:43] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 01:53:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 01:53:44] 2.11.2.0 2951 25673 79260 153350 2 81 19813484 20275201 1 130560 0 4695119 99.716 1661593 30657 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 01:53:44] CVMFS is ok
[2025-11-27 01:53:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 01:53:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 01:53:44] Further information can be found at the LHC@home message board.
[2025-11-27 01:53:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 01:53:44] Checking for apptainer binary...
[2025-11-27 01:53:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 01:53:44] Running /usr/bin/apptainer --version
[2025-11-27 01:53:44] apptainer version 1.3.2-1.el7
[2025-11-27 01:53:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 01:53:45] c-204-23.aglt2.org
[2025-11-27 01:53:45] apptainer works
[2025-11-27 01:53:45] Set ATHENA_PROC_NUMBER=8
[2025-11-27 01:53:45] Set ATHENA_CORE_NUMBER=8
[2025-11-27 01:53:45] Starting ATLAS job with PandaID=6898214228
[2025-11-27 01:53:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 14:20:25]  *** The last 200 lines of the pilot log: ***
[2025-11-27 14:20:25] 2025-11-27 19:19:49,725 | INFO     | time since job start (44746s) is within the limit (172800.0s)
[2025-11-27 14:20:25] 2025-11-27 19:19:51,728 | INFO     | time since job start (44748s) is within the limit (172800.0s)
[2025-11-27 14:20:25] 2025-11-27 19:19:52,031 | INFO     | monitor loop #3285: job 0:6898214228 is in state 'finished'
[2025-11-27 14:20:25] 2025-11-27 19:19:52,031 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 14:20:25] 2025-11-27 19:19:53,436 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 14:20:25] 2025-11-27 19:19:53,440 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1828.75
[2025-11-27 14:20:25] 2025-11-27 19:19:53,442 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6898214228/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 14:20:25] 2025-11-27 19:19:53,443 | INFO     | extracted standard info from prmon json
[2025-11-27 14:20:25] 2025-11-27 19:19:53,443 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 14:20:25] 2025-11-27 19:19:53,443 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 14:20:25] 2025-11-27 19:19:53,457 | INFO     | fitting pss+swap vs Time
[2025-11-27 14:20:25] 2025-11-27 19:19:53,458 | INFO     | sum of square deviations: 122120927664.59198
[2025-11-27 14:20:25] 2025-11-27 19:19:53,470 | INFO     | sum of deviations: 950126136523.5743
[2025-11-27 14:20:25] 2025-11-27 19:19:53,470 | INFO     | mean x: 1764248801.6507504
[2025-11-27 14:20:25] 2025-11-27 19:19:53,470 | INFO     | mean y: 3157832.5920873126
[2025-11-27 14:20:25] 2025-11-27 19:19:53,470 | INFO     | intersect: -13723063625.393051
[2025-11-27 14:20:25] 2025-11-27 19:19:53,471 | INFO     | chi2: 5.851051721111125
[2025-11-27 14:20:25] 2025-11-27 19:19:53,472 | INFO     | sum of square deviations: 119639017307.4603
[2025-11-27 14:20:25] 2025-11-27 19:19:53,484 | INFO     | sum of deviations: 1204292287848.5234
[2025-11-27 14:20:25] 2025-11-27 19:19:53,484 | INFO     | mean x: 1764248649.1552198
[2025-11-27 14:20:25] 2025-11-27 19:19:53,484 | INFO     | mean y: 3173440.8626373624
[2025-11-27 14:20:25] 2025-11-27 19:19:53,484 | INFO     | intersect: -17755841049.908504
[2025-11-27 14:20:25] 2025-11-27 19:19:53,485 | INFO     | chi2: 2.952255350142298
[2025-11-27 14:20:25] 2025-11-27 19:19:53,485 | INFO     | current chi2=2.952255350142298 (change=49.54316777802026 %)
[2025-11-27 14:20:25] 2025-11-27 19:19:53,486 | INFO     | sum of square deviations: 117190968050.29878
[2025-11-27 14:20:25] 2025-11-27 19:19:53,497 | INFO     | sum of deviations: 1255552519611.0964
[2025-11-27 14:20:25] 2025-11-27 19:19:53,497 | INFO     | mean x: 1764248496.659751
[2025-11-27 14:20:25] 2025-11-27 19:19:53,497 | INFO     | mean y: 3176624.0857538036
[2025-11-27 14:20:25] 2025-11-27 19:19:53,497 | INFO     | intersect: -18898507371.309757
[2025-11-27 14:20:25] 2025-11-27 19:19:53,498 | INFO     | chi2: 2.6838045509075994
[2025-11-27 14:20:25] 2025-11-27 19:19:53,498 | INFO     | current chi2=2.6838045509075994 (change=9.093075205088857 %)
[2025-11-27 14:20:25] 2025-11-27 19:19:53,498 | INFO     | right removable region: 722
[2025-11-27 14:20:25] 2025-11-27 19:19:53,499 | INFO     | sum of square deviations: 119638726337.46033
[2025-11-27 14:20:25] 2025-11-27 19:19:53,511 | INFO     | sum of deviations: 720210874064.5292
[2025-11-27 14:20:25] 2025-11-27 19:19:53,511 | INFO     | mean x: 1764248954.1552198
[2025-11-27 14:20:25] 2025-11-27 19:19:53,512 | INFO     | mean y: 3171934.6236263737
[2025-11-27 14:20:25] 2025-11-27 19:19:53,512 | INFO     | intersect: -10617396507.032478
[2025-11-27 14:20:25] 2025-11-27 19:19:53,512 | INFO     | chi2: 3.38680564264386
[2025-11-27 14:20:25] 2025-11-27 19:19:53,513 | INFO     | current chi2=3.38680564264386 (change=42.116292863658025 %)
[2025-11-27 14:20:25] 2025-11-27 19:19:53,513 | INFO     | sum of square deviations: 117190563987.55453
[2025-11-27 14:20:25] 2025-11-27 19:19:53,525 | INFO     | sum of deviations: 675315151752.1619
[2025-11-27 14:20:25] 2025-11-27 19:19:53,525 | INFO     | mean x: 1764249106.6542184
[2025-11-27 14:20:25] 2025-11-27 19:19:53,525 | INFO     | mean y: 3174729.684647303
[2025-11-27 14:20:25] 2025-11-27 19:19:53,525 | INFO     | intersect: -10163378895.872929
[2025-11-27 14:20:25] 2025-11-27 19:19:53,526 | INFO     | chi2: 3.351854609708733
[2025-11-27 14:20:25] 2025-11-27 19:19:53,526 | INFO     | current chi2=3.351854609708733 (change=1.0319763406276545 %)
[2025-11-27 14:20:25] 2025-11-27 19:19:53,526 | INFO     | left removable region: 20
[2025-11-27 14:20:25] 2025-11-27 19:19:53,527 | INFO     | sum of square deviations: 107272994240.16087
[2025-11-27 14:20:25] 2025-11-27 19:19:53,537 | INFO     | sum of deviations: 894100248302.9492
[2025-11-27 14:20:25] 2025-11-27 19:19:53,538 | INFO     | mean x: 1764249076.1638176
[2025-11-27 14:20:25] 2025-11-27 19:19:53,538 | INFO     | mean y: 3199315.9743589745
[2025-11-27 14:20:25] 2025-11-27 19:19:53,538 | INFO     | intersect: -14701485197.02458
[2025-11-27 14:20:25] 2025-11-27 19:19:53,539 | INFO     | chi2: 0.11181457276283503
[2025-11-27 14:20:25] 2025-11-27 19:19:53,539 | INFO     | current memory leak: 8.33 B/s (using 702 data points, chi2=0.11)
[2025-11-27 14:20:25] 2025-11-27 19:19:53,540 | INFO     | could have reported an average CPU frequency of 2172 MHz (28 samples)
[2025-11-27 14:20:25] 2025-11-27 19:19:53,540 | INFO     | ..............................
[2025-11-27 14:20:25] 2025-11-27 19:19:53,540 | INFO     | . Timing measurements:
[2025-11-27 14:20:25] 2025-11-27 19:19:53,540 | INFO     | . get job = 0 s
[2025-11-27 14:20:25] 2025-11-27 19:19:53,540 | INFO     | . initial setup = 2 s
[2025-11-27 14:20:25] 2025-11-27 19:19:53,540 | INFO     | . payload setup = 8 s
[2025-11-27 14:20:25] 2025-11-27 19:19:53,540 | INFO     | . stage-in = 0 s
[2025-11-27 14:20:25] 2025-11-27 19:19:53,540 | INFO     | . payload execution = 44706 s
[2025-11-27 14:20:25] 2025-11-27 19:19:53,541 | INFO     | . stage-out = 3 s
[2025-11-27 14:20:25] 2025-11-27 19:19:53,541 | INFO     | . log creation = 0 s
[2025-11-27 14:20:25] 2025-11-27 19:19:53,541 | INFO     | ..............................
[2025-11-27 14:20:25] 2025-11-27 19:19:53,634 | INFO     | 
[2025-11-27 14:20:25] 2025-11-27 19:19:53,634 | INFO     | job summary report
[2025-11-27 14:20:25] 2025-11-27 19:19:53,635 | INFO     | --------------------------------------------------
[2025-11-27 14:20:25] 2025-11-27 19:19:53,635 | INFO     | PanDA job id: 6898214228
[2025-11-27 14:20:25] 2025-11-27 19:19:53,635 | INFO     | task id: 47556161
[2025-11-27 14:20:25] 2025-11-27 19:19:53,635 | INFO     | errors: (none)
[2025-11-27 14:20:25] 2025-11-27 19:19:53,635 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 14:20:25] 2025-11-27 19:19:53,635 | INFO     | pilot state: finished 
[2025-11-27 14:20:25] 2025-11-27 19:19:53,635 | INFO     | transexitcode: 0
[2025-11-27 14:20:25] 2025-11-27 19:19:53,636 | INFO     | exeerrorcode: 0
[2025-11-27 14:20:25] 2025-11-27 19:19:53,636 | INFO     | exeerrordiag: 
[2025-11-27 14:20:25] 2025-11-27 19:19:53,636 | INFO     | exitcode: 0
[2025-11-27 14:20:25] 2025-11-27 19:19:53,636 | INFO     | exitmsg: OK
[2025-11-27 14:20:25] 2025-11-27 19:19:53,636 | INFO     | cpuconsumptiontime: 347443 s
[2025-11-27 14:20:25] 2025-11-27 19:19:53,636 | INFO     | nevents: 1000
[2025-11-27 14:20:25] 2025-11-27 19:19:53,636 | INFO     | neventsw: 0
[2025-11-27 14:20:25] 2025-11-27 19:19:53,636 | INFO     | pid: 2817
[2025-11-27 14:20:25] 2025-11-27 19:19:53,637 | INFO     | pgrp: 2817
[2025-11-27 14:20:25] 2025-11-27 19:19:53,637 | INFO     | corecount: 8
[2025-11-27 14:20:25] 2025-11-27 19:19:53,637 | INFO     | event service: False
[2025-11-27 14:20:25] 2025-11-27 19:19:53,637 | INFO     | sizes: {0: 2284264, 1: 2284264, 6: 2284554, 11: 2284582, 44718: 2330395, 44723: 2339389, 44726: 2339573, 44733: 2339819}
[2025-11-27 14:20:25] 2025-11-27 19:19:53,637 | INFO     | --------------------------------------------------
[2025-11-27 14:20:25] 2025-11-27 19:19:53,637 | INFO     | 
[2025-11-27 14:20:25] 2025-11-27 19:19:53,637 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 14:20:25] 2025-11-27 19:19:53,666 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 14:20:25] 2025-11-27 19:19:53,667 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 14:20:25] 2025-11-27 19:19:53,667 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 14:20:25] 2025-11-27 19:19:53,667 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 14:20:25] 2025-11-27 19:19:53,667 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 14:20:25] 2025-11-27 19:19:53,667 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 14:20:25] 2025-11-27 19:19:53,668 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 14:20:25] 2025-11-27 19:19:53,668 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 14:20:25] 2025-11-27 19:19:53,668 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 14:20:25] 2025-11-27 19:19:53,668 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 14:20:25] 2025-11-27 19:19:53,668 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 14:20:25] 2025-11-27 19:19:53,668 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 14:20:25] 2025-11-27 19:19:53,669 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 14:20:25] 2025-11-27 19:19:53,669 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 14:20:25] 2025-11-27 19:19:53,669 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 14:20:25] 2025-11-27 19:19:53,669 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 14:20:25] 2025-11-27 19:19:53,669 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 14:20:25] 2025-11-27 19:19:53,669 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 14:20:25] 2025-11-27 19:19:53,670 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 14:20:25] 2025-11-27 19:19:53,670 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 14:20:25] 2025-11-27 19:19:53,670 | INFO     | job 6898214228 has completed (purged errors)
[2025-11-27 14:20:25] 2025-11-27 19:19:53,670 | INFO     | overall cleanup function is called
[2025-11-27 14:20:25] 2025-11-27 19:19:54,685 | INFO     | --- collectZombieJob: --- 10, [2817]
[2025-11-27 14:20:25] 2025-11-27 19:19:54,685 | INFO     | zombie collector waiting for pid 2817
[2025-11-27 14:20:25] 2025-11-27 19:19:54,686 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 14:20:25] 2025-11-27 19:19:54,686 | INFO     | collected zombie processes
[2025-11-27 14:20:25] 2025-11-27 19:19:54,686 | INFO     | will attempt to kill all subprocesses of pid=2817
[2025-11-27 14:20:25] 2025-11-27 19:19:54,778 | INFO     | process IDs to be killed: [2817] (in reverse order)
[2025-11-27 14:20:25] 2025-11-27 19:19:54,834 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 14:20:25] 2025-11-27 19:19:54,835 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 14:20:25] 2025-11-27 19:19:54,838 | INFO     | did not find any defunct processes belonging to 2817
[2025-11-27 14:20:25] 2025-11-27 19:19:54,842 | INFO     | did not find any defunct processes belonging to 2817
[2025-11-27 14:20:25] 2025-11-27 19:19:54,845 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 14:20:25] 2025-11-27 19:19:54,845 | INFO     | ready for new job
[2025-11-27 14:20:25] 2025-11-27 19:19:54,845 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 14:20:25] 2025-11-27 19:19:54,850 | INFO     | ***************************************
[2025-11-27 14:20:25] 2025-11-27 19:19:54,850 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 14:20:25] 2025-11-27 19:19:54,850 | INFO     | ***************************************
[2025-11-27 14:20:25] 2025-11-27 19:19:54,850 | INFO     | 
[2025-11-27 14:20:25] 2025-11-27 19:19:54,851 | INFO     | architecture information:
[2025-11-27 14:20:25] 2025-11-27 19:19:54,851 | INFO     | executing command: cat /etc/os-release
[2025-11-27 14:20:25] 2025-11-27 19:19:54,871 | INFO     | cat /etc/os-release:
[2025-11-27 14:20:25] NAME="CentOS Linux"
[2025-11-27 14:20:25] VERSION="7 (Core)"
[2025-11-27 14:20:25] ID="centos"
[2025-11-27 14:20:25] ID_LIKE="rhel fedora"
[2025-11-27 14:20:25] VERSION_ID="7"
[2025-11-27 14:20:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 14:20:25] ANSI_COLOR="0;31"
[2025-11-27 14:20:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 14:20:25] HOME_URL="https://www.centos.org/"
[2025-11-27 14:20:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 14:20:25] 
[2025-11-27 14:20:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 14:20:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 14:20:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 14:20:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 14:20:25] 
[2025-11-27 14:20:25] 2025-11-27 19:19:54,871 | INFO     | ***************************************
[2025-11-27 14:20:25] 2025-11-27 19:19:55,374 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 14:20:25] 2025-11-27 19:19:55,395 | INFO     | sufficient remaining disk space (17423138816 B)
[2025-11-27 14:20:25] 2025-11-27 19:19:55,396 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 14:20:25] 2025-11-27 19:19:55,396 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 14:20:25] 2025-11-27 19:19:55,396 | INFO     | update_server=False
[2025-11-27 14:20:25] 2025-11-27 19:19:55,396 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 14:20:25] 2025-11-27 19:19:55,397 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 14:20:25] 2025-11-27 19:19:55,536 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 14:20:25] 2025-11-27 19:19:55,536 | INFO     | aborting loop
[2025-11-27 14:20:25] 2025-11-27 19:19:55,671 | INFO     | all data control threads have been joined
[2025-11-27 14:20:25] 2025-11-27 19:19:56,402 | INFO     | [job] retrieve thread has finished
[2025-11-27 14:20:25] 2025-11-27 19:19:56,403 | INFO     | [job] queue monitor thread has finished
[2025-11-27 14:20:25] 2025-11-27 19:19:56,415 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 14:20:25] 2025-11-27 19:19:56,429 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 14:20:25] 2025-11-27 19:19:56,537 | INFO     | [job] job monitor thread has finished
[2025-11-27 14:20:25] 2025-11-27 19:19:56,599 | INFO     | [job] validate thread has finished
[2025-11-27 14:20:25] 2025-11-27 19:19:56,676 | INFO     | [data] control thread has finished
[2025-11-27 14:20:25] 2025-11-27 19:19:56,775 | INFO     | all payload control threads have been joined
[2025-11-27 14:20:25] 2025-11-27 19:19:56,792 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 14:20:25] 2025-11-27 19:19:56,964 | INFO     | [data] copytool_in thread has finished
[2025-11-27 14:20:25] 2025-11-27 19:19:56,988 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 14:20:25] 2025-11-27 19:19:57,067 | INFO     | all job control threads have been joined
[2025-11-27 14:20:25] 2025-11-27 19:19:57,239 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 14:20:25] 2025-11-27 19:19:57,501 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 14:20:25] 2025-11-27 19:19:57,618 | INFO     | [payload] failed_post thread has finished
[2025-11-27 14:20:25] 2025-11-27 19:19:57,638 | INFO     | [payload] validate_post thread has finished
[2025-11-27 14:20:25] 2025-11-27 19:19:57,780 | INFO     | [payload] control thread has finished
[2025-11-27 14:20:25] 2025-11-27 19:19:58,073 | INFO     | [job] control thread has finished
[2025-11-27 14:20:25] 2025-11-27 19:19:58,798 | INFO     | [data] copytool_out thread has finished
[2025-11-27 14:20:25] 2025-11-27 19:20:01,503 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 14:20:25] 2025-11-27 19:20:16,997 | INFO     | [monitor] cgroup control has ended
[2025-11-27 14:20:25] 2025-11-27 19:20:17,370 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139668821092160)>', '<ExcThread(monitor, started 139668066641664)>']
[2025-11-27 14:20:25] 2025-11-27 19:20:22,394 | INFO     | all workflow threads have been joined
[2025-11-27 14:20:25] 2025-11-27 19:20:22,394 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 14:20:25] 2025-11-27 19:20:22,395 | INFO     | traces error code: 0
[2025-11-27 14:20:25] 2025-11-27 19:20:22,395 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 14:20:25] 2025-11-27 19:20:24,936 | INFO     | PID=28689 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 14:20:25] 2025-11-27 19:20:24,937 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 14:20:25] 2025-11-27 19:20:24,937 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 14:20:25] 2025-11-27 19:20:24,937 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 14:20:25] 2025-11-27 19:20:24,937 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 14:20:25] 2025-11-27 19:20:24,937 | INFO     | [monitor] control thread has ended
[2025-11-27 14:20:25] 2025-11-27 19:20:25,054 [wrapper] ==== pilot stdout END ====
[2025-11-27 14:20:25] 2025-11-27 19:20:25,058 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 14:20:25] 2025-11-27 19:20:25,062 [wrapper] pilotpid: 28689
[2025-11-27 14:20:25] 2025-11-27 19:20:25,068 [wrapper] Pilot exit status: 0
[2025-11-27 14:20:25] 2025-11-27 19:20:25,084 [wrapper] pandaids: 6898214228
[2025-11-27 14:20:25] 2025-11-27 19:20:25,129 [wrapper] cleanup supervisor_pilot  3590 28690
[2025-11-27 14:20:25] 2025-11-27 19:20:25,134 [wrapper] Test setup, not cleaning
[2025-11-27 14:20:25] 2025-11-27 19:20:25,139 [wrapper] apfmon messages muted
[2025-11-27 14:20:25] 2025-11-27 19:20:25,144 [wrapper] ==== wrapper stdout END ====
[2025-11-27 14:20:25] 2025-11-27 19:20:25,149 [wrapper] ==== wrapper stderr END ====
[2025-11-27 14:20:25]  *** Error codes and diagnostics ***
[2025-11-27 14:20:25]     "exeErrorCode": 0,
[2025-11-27 14:20:25]     "exeErrorDiag": "",
[2025-11-27 14:20:25]     "pilotErrorCode": 0,
[2025-11-27 14:20:25]     "pilotErrorDiag": "",
[2025-11-27 14:20:25]  *** Listing of results directory ***
[2025-11-27 14:20:25] total 1329584
[2025-11-27 14:20:25] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 22:33 pilot3.tar.gz
[2025-11-27 14:20:25] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 23:31 queuedata.json
[2025-11-27 14:20:25] -rwx------ 1 boincer umatlas     36292 Nov 25 23:31 runpilot2-wrapper.sh
[2025-11-27 14:20:25] -rw-r--r-- 1 boincer umatlas       100 Nov 27 01:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 14:20:25] -rwxr-xr-x 1 boincer umatlas      7986 Nov 27 01:53 run_atlas
[2025-11-27 14:20:25] -rw-r--r-- 1 boincer umatlas       105 Nov 27 01:53 job.xml
[2025-11-27 14:20:25] -rw-r--r-- 2 boincer umatlas 411811685 Nov 27 01:53 EVNT.47483658._002487.pool.root.1
[2025-11-27 14:20:25] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 01:53 start_atlas.sh
[2025-11-27 14:20:25] drwxrwx--x 2 boincer umatlas      4096 Nov 27 01:53 shared
[2025-11-27 14:20:25] -rw-r--r-- 2 boincer umatlas    590111 Nov 27 01:53 input.tar.gz
[2025-11-27 14:20:25] -rw-r--r-- 1 boincer umatlas         0 Nov 27 01:53 boinc_lockfile
[2025-11-27 14:20:25] -rw-r--r-- 1 boincer umatlas      2785 Nov 27 01:53 pandaJob.out
[2025-11-27 14:20:25] -rw------- 1 boincer umatlas        57 Nov 27 01:53 setup.sh.local
[2025-11-27 14:20:25] -rw------- 1 boincer umatlas    991554 Nov 27 01:54 agis_schedconf.cvmfs.json
[2025-11-27 14:20:25] drwx------ 5 boincer umatlas      4096 Nov 27 01:54 pilot3
[2025-11-27 14:20:25] -rw-r--r-- 1 boincer umatlas       533 Nov 27 14:09 boinc_task_state.xml
[2025-11-27 14:20:25] -rw------- 1 boincer umatlas 929486218 Nov 27 14:19 HITS.47556161._004699.pool.root.1
[2025-11-27 14:20:25] -rw------- 1 boincer umatlas      1064 Nov 27 14:19 memory_monitor_summary.json
[2025-11-27 14:20:25] -rw------- 1 boincer umatlas   1516240 Nov 27 14:19 agis_ddmendpoints.agis.ALL.json
[2025-11-27 14:20:25] -rw------- 1 boincer umatlas   1990409 Nov 27 14:19 log.47556161._004699.job.log.tgz.1
[2025-11-27 14:20:25] -rw------- 1 boincer umatlas      8663 Nov 27 14:19 heartbeat.json
[2025-11-27 14:20:25] -rw-r--r-- 1 boincer umatlas      5913 Nov 27 14:19 init_data.xml
[2025-11-27 14:20:25] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 14:20 boinc_mmap_file
[2025-11-27 14:20:25] -rw-r--r-- 1 boincer umatlas        29 Nov 27 14:20 wrapper_checkpoint.txt
[2025-11-27 14:20:25] -rw------- 1 boincer umatlas        95 Nov 27 14:20 pilot_heartbeat.json
[2025-11-27 14:20:25] -rw------- 1 boincer umatlas       745 Nov 27 14:20 pilotlog.txt
[2025-11-27 14:20:25] -rw------- 1 boincer umatlas   6149625 Nov 27 14:20 log.47556161._004699.job.log.1
[2025-11-27 14:20:25] -rw------- 1 boincer umatlas       353 Nov 27 14:20 output.list
[2025-11-27 14:20:25] -rw-r--r-- 1 boincer umatlas       620 Nov 27 14:20 runtime_log
[2025-11-27 14:20:25] -rw------- 1 boincer umatlas   8161280 Nov 27 14:20 result.tar.gz
[2025-11-27 14:20:25] -rw-r--r-- 1 boincer umatlas      9343 Nov 27 14:20 runtime_log.err
[2025-11-27 14:20:25] -rw------- 1 boincer umatlas       668 Nov 27 14:20 gy3NDmzMMi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjwMKDm7PXdAn.diag
[2025-11-27 14:20:25] -rw-r--r-- 1 boincer umatlas     21308 Nov 27 14:20 stderr.txt
[2025-11-27 14:20:25] HITS file was successfully produced:
[2025-11-27 14:20:25] -rw------- 1 boincer umatlas 929486218 Nov 27 14:19 shared/HITS.pool.root.1
[2025-11-27 14:20:25]  *** Contents of shared directory: ***
[2025-11-27 14:20:25] total 1318436
[2025-11-27 14:20:25] -rw-r--r-- 2 boincer umatlas 411811685 Nov 27 01:53 ATLAS.root_0
[2025-11-27 14:20:25] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 01:53 start_atlas.sh
[2025-11-27 14:20:25] -rw-r--r-- 2 boincer umatlas    590111 Nov 27 01:53 input.tar.gz
[2025-11-27 14:20:25] -rw------- 1 boincer umatlas 929486218 Nov 27 14:19 HITS.pool.root.1
[2025-11-27 14:20:25] -rw------- 1 boincer umatlas   8161280 Nov 27 14:20 result.tar.gz
14:20:26 (25015): run_atlas exited; CPU time 344807.845064
14:20:26 (25015): called boinc_finish(0)

</stderr_txt>
]]>

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