Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:33:34 (2001402): wrapper (7.7.26015): starting
03:33:34 (2001402): wrapper: running run_atlas (--nthreads 3)
[2025-11-27 03:33:34] Arguments: --nthreads 3
[2025-11-27 03:33:34] Threads: 3
[2025-11-27 03:33:34] Checking for CVMFS
[2025-11-27 03:33:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 03:33:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 03:33:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 03:33:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 03:33:35] 2.9.2.0 1917719 17 52600 153343 2 88 35807292 36864001 0 130560 0 250384 99.999 1362 11073 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 03:33:35] CVMFS is ok
[2025-11-27 03:33:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 03:33:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 03:33:35] Further information can be found at the LHC@home message board.
[2025-11-27 03:33:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 03:33:35] Checking for apptainer binary...
[2025-11-27 03:33:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 03:33:35] Running /usr/bin/apptainer --version
[2025-11-27 03:33:35] apptainer version 1.4.1-1.1
[2025-11-27 03:33:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 03:33:35] thA335
[2025-11-27 03:33:35] apptainer works
[2025-11-27 03:33:35] Set ATHENA_PROC_NUMBER=3
[2025-11-27 03:33:35] Set ATHENA_CORE_NUMBER=3
[2025-11-27 03:33:35] Starting ATLAS job with PandaID=6898687441
[2025-11-27 03:33:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 03:37:52]  *** The last 200 lines of the pilot log: ***
[2025-11-27 03:37:52] 2025-11-27 02:36:59,820 | INFO     | executing command: cat /etc/os-release
[2025-11-27 03:37:52] 2025-11-27 02:36:59,830 | INFO     | cat /etc/os-release:
[2025-11-27 03:37:52] NAME="CentOS Linux"
[2025-11-27 03:37:52] VERSION="7 (Core)"
[2025-11-27 03:37:52] ID="centos"
[2025-11-27 03:37:52] ID_LIKE="rhel fedora"
[2025-11-27 03:37:52] VERSION_ID="7"
[2025-11-27 03:37:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 03:37:52] ANSI_COLOR="0;31"
[2025-11-27 03:37:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 03:37:52] HOME_URL="https://www.centos.org/"
[2025-11-27 03:37:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 03:37:52] 
[2025-11-27 03:37:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 03:37:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 03:37:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 03:37:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 03:37:52] 
[2025-11-27 03:37:52] 2025-11-27 02:36:59,830 | INFO     | ***************************************
[2025-11-27 03:37:52] 2025-11-27 02:37:00,334 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-27 03:37:52] 2025-11-27 02:37:00,348 | INFO     | sufficient remaining disk space (826203439104 B)
[2025-11-27 03:37:52] 2025-11-27 02:37:00,348 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 03:37:52] 2025-11-27 02:37:00,348 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 03:37:52] 2025-11-27 02:37:00,348 | INFO     | update_server=False
[2025-11-27 03:37:52] 2025-11-27 02:37:00,348 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 03:37:52] 2025-11-27 02:37:00,348 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:37:52] 2025-11-27 02:37:00,348 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:37:52] 2025-11-27 02:37:00,349 | INFO     | aborting loop
[2025-11-27 03:37:52] 2025-11-27 02:37:00,604 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 03:37:52] 2025-11-27 02:37:00,615 | INFO     | all job control threads have been joined
[2025-11-27 03:37:52] 2025-11-27 02:37:01,354 | INFO     | [job] queue monitor thread has finished
[2025-11-27 03:37:52] 2025-11-27 02:37:01,355 | INFO     | [job] job monitor thread has finished
[2025-11-27 03:37:52] 2025-11-27 02:37:01,356 | INFO     | [job] retrieve thread has finished
[2025-11-27 03:37:52] 2025-11-27 02:37:01,379 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 03:37:52] 2025-11-27 02:37:01,433 | INFO     | all data control threads have been joined
[2025-11-27 03:37:52] 2025-11-27 02:37:01,621 | INFO     | [job] control thread has finished
[2025-11-27 03:37:52] 2025-11-27 02:37:01,627 | INFO     | [data] copytool_in thread has finished
[2025-11-27 03:37:52] 2025-11-27 02:37:01,706 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 03:37:52] 2025-11-27 02:37:01,753 | INFO     | all payload control threads have been joined
[2025-11-27 03:37:52] 2025-11-27 02:37:02,027 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 03:37:52] 2025-11-27 02:37:02,185 | INFO     | [payload] failed_post thread has finished
[2025-11-27 03:37:52] 2025-11-27 02:37:02,353 | INFO     | [payload] validate_post thread has finished
[2025-11-27 03:37:52] 2025-11-27 02:37:02,440 | INFO     | [data] control thread has finished
[2025-11-27 03:37:52] 2025-11-27 02:37:02,611 | INFO     | [data] copytool_out thread has finished
[2025-11-27 03:37:52] 2025-11-27 02:37:02,735 | INFO     | [job] validate thread has finished
[2025-11-27 03:37:52] 2025-11-27 02:37:02,758 | INFO     | [payload] control thread has finished
[2025-11-27 03:37:52] 2025-11-27 02:37:02,816 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 03:37:52] 2025-11-27 02:37:03,410 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 03:37:52] 2025-11-27 02:37:07,417 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 03:37:52] 2025-11-27 02:37:30,908 | INFO     | PID=2005129 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 03:37:52] 2025-11-27 02:37:30,908 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 03:37:52] 2025-11-27 02:37:30,908 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 03:37:52] 2025-11-27 02:37:30,908 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 03:37:52] 2025-11-27 02:37:46,101 | INFO     | [monitor] cgroup control has ended
[2025-11-27 03:37:52] 2025-11-27 02:37:47,177 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140493831628608)>', '<ExcThread(monitor, started 140493195302656)>']
[2025-11-27 03:37:52] 2025-11-27 02:37:47,995 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 03:37:52] 2025-11-27 02:37:47,995 | INFO     | [monitor] control thread has ended
[2025-11-27 03:37:52] 2025-11-27 02:37:52,202 | INFO     | all workflow threads have been joined
[2025-11-27 03:37:52] 2025-11-27 02:37:52,203 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 03:37:52] 2025-11-27 02:37:52,203 | INFO     | traces error code: 0
[2025-11-27 03:37:52] 2025-11-27 02:37:52,204 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 03:37:52] 2025-11-27 02:37:52,251 [wrapper] ==== pilot stdout END ====
[2025-11-27 03:37:52] 2025-11-27 02:37:52,254 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 03:37:52] 2025-11-27 02:37:52,257 [wrapper] pilotpid: 2005129
[2025-11-27 03:37:52] 2025-11-27 02:37:52,260 [wrapper] Pilot exit status: 0
[2025-11-27 03:37:52] 2025-11-27 02:37:52,267 [wrapper] pandaids: 6898687441
[2025-11-27 03:37:52] 2025-11-27 02:37:52,284 [wrapper] cleanup supervisor_pilot 2005135 2005130
[2025-11-27 03:37:52] 2025-11-27 02:37:52,287 [wrapper] Test setup, not cleaning
[2025-11-27 03:37:52] 2025-11-27 02:37:52,290 [wrapper] apfmon messages muted
[2025-11-27 03:37:52] 2025-11-27 02:37:52,293 [wrapper] ==== wrapper stdout END ====
[2025-11-27 03:37:52] 2025-11-27 02:37:52,295 [wrapper] ==== wrapper stderr END ====
[2025-11-27 03:37:52]  *** Error codes and diagnostics ***
[2025-11-27 03:37:52]     "exeErrorCode": 65,
[2025-11-27 03:37:52]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-27 03:37:52]     "pilotErrorCode": 1305,
[2025-11-27 03:37:52]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-27 03:37:52]  *** Listing of results directory ***
[2025-11-27 03:37:52] total 404904
[2025-11-27 03:37:52] -rw-r--r-- 1 boinc boinc    576529 Nov 26 17:12 pilot3.tar.gz
[2025-11-27 03:37:52] -rwx------ 1 boinc boinc     36292 Nov 26 17:39 runpilot2-wrapper.sh
[2025-11-27 03:37:52] -rw-r--r-- 1 boinc boinc      5112 Nov 26 17:41 queuedata.json
[2025-11-27 03:37:52] -rw-r--r-- 1 boinc boinc       100 Nov 27 03:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 03:37:52] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 03:33 run_atlas
[2025-11-27 03:37:52] -rw-r--r-- 1 boinc boinc       105 Nov 27 03:33 job.xml
[2025-11-27 03:37:52] -rw-r--r-- 2 boinc boinc 410428760 Nov 27 03:33 EVNT.47483658._002670.pool.root.1
[2025-11-27 03:37:52] -rw-r--r-- 2 boinc boinc    590105 Nov 27 03:33 input.tar.gz
[2025-11-27 03:37:52] -rw-r--r-- 2 boinc boinc     15847 Nov 27 03:33 start_atlas.sh
[2025-11-27 03:37:52] drwxrwx--x 2 boinc boinc      4096 Nov 27 03:33 shared
[2025-11-27 03:37:52] -rw-r--r-- 1 boinc boinc         0 Nov 27 03:33 boinc_setup_complete
[2025-11-27 03:37:52] -rw-r--r-- 1 boinc boinc      6196 Nov 27 03:33 init_data.xml
[2025-11-27 03:37:52] -rw-r--r-- 1 boinc boinc         0 Nov 27 03:33 boinc_lockfile
[2025-11-27 03:37:52] -rw-r--r-- 1 boinc boinc      2787 Nov 27 03:33 pandaJob.out
[2025-11-27 03:37:52] -rw------- 1 boinc boinc    991554 Nov 27 03:33 agis_schedconf.cvmfs.json
[2025-11-27 03:37:52] -rw------- 1 boinc boinc   1516240 Nov 27 03:33 agis_ddmendpoints.agis.ALL.json
[2025-11-27 03:37:52] drwx------ 5 boinc boinc      4096 Nov 27 03:33 pilot3
[2025-11-27 03:37:52] -rw-r--r-- 1 boinc boinc       523 Nov 27 03:34 boinc_task_state.xml
[2025-11-27 03:37:52] -rw------- 1 boinc boinc       956 Nov 27 03:34 memory_monitor_summary.json
[2025-11-27 03:37:52] -rw------- 1 boinc boinc     55992 Nov 27 03:34 log.47556161._006529.job.log.tgz.1
[2025-11-27 03:37:52] -rw------- 1 boinc boinc        95 Nov 27 03:36 pilot_heartbeat.json
[2025-11-27 03:37:52] -rw------- 1 boinc boinc      8391 Nov 27 03:36 heartbeat.json
[2025-11-27 03:37:52] -rw-r--r-- 1 boinc boinc      8192 Nov 27 03:37 boinc_mmap_file
[2025-11-27 03:37:52] -rw-r--r-- 1 boinc boinc        23 Nov 27 03:37 wrapper_checkpoint.txt
[2025-11-27 03:37:52] -rw------- 1 boinc boinc      4752 Nov 27 03:37 pilotlog.txt
[2025-11-27 03:37:52] -rw------- 1 boinc boinc     91882 Nov 27 03:37 log.47556161._006529.job.log.1
[2025-11-27 03:37:52] -rw------- 1 boinc boinc       186 Nov 27 03:37 output.list
[2025-11-27 03:37:52] -rw-r--r-- 1 boinc boinc       620 Nov 27 03:37 runtime_log
[2025-11-27 03:37:52] -rw------- 1 boinc boinc    163840 Nov 27 03:37 result.tar.gz
[2025-11-27 03:37:52] -rw-r--r-- 1 boinc boinc      8744 Nov 27 03:37 runtime_log.err
[2025-11-27 03:37:52] -rw------- 1 boinc boinc       649 Nov 27 03:37 GfULDmwiXi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmyJNKDmlQfyQn.diag
[2025-11-27 03:37:52] -rw-r--r-- 1 boinc boinc      9257 Nov 27 03:37 stderr.txt
[2025-11-27 03:37:52] No HITS result produced
[2025-11-27 03:37:52]  *** Contents of shared directory: ***
[2025-11-27 03:37:52] total 401572
[2025-11-27 03:37:52] -rw-r--r-- 2 boinc boinc 410428760 Nov 27 03:33 ATLAS.root_0
[2025-11-27 03:37:52] -rw-r--r-- 2 boinc boinc    590105 Nov 27 03:33 input.tar.gz
[2025-11-27 03:37:52] -rw-r--r-- 2 boinc boinc     15847 Nov 27 03:33 start_atlas.sh
[2025-11-27 03:37:52] -rw------- 1 boinc boinc    163840 Nov 27 03:37 result.tar.gz
03:37:53 (2001402): run_atlas exited; CPU time 31.125219
03:37:53 (2001402): called boinc_finish(0)

</stderr_txt>
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