Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:31:38 (2037280): wrapper (7.7.26015): starting
16:31:38 (2037280): wrapper: running run_atlas (--nthreads 6)
[2025-11-27 16:31:38] Arguments: --nthreads 6
[2025-11-27 16:31:38] Threads: 6
[2025-11-27 16:31:38] Checking for CVMFS
[2025-11-27 16:31:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 16:31:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 16:31:38] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 16:31:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 16:31:38] 2.13.3.0 1581104 3109 85672 153371 0 81 22203880 81920000 0 130560 0 1633262 99.984 125585 1551 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://147.213.204.101:3128 1
[2025-11-27 16:31:38] CVMFS is ok
[2025-11-27 16:31:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 16:31:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 16:31:38] Further information can be found at the LHC@home message board.
[2025-11-27 16:31:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 16:31:38] Checking for apptainer binary...
[2025-11-27 16:31:38] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/var/lib/snapd/snap/bin)
[2025-11-27 16:31:38] apptainer is not installed, using version from CVMFS
[2025-11-27 16:31:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 16:31:39] monitor-atlas.iep
[2025-11-27 16:31:39] apptainer works
[2025-11-27 16:31:39] Set ATHENA_PROC_NUMBER=6
[2025-11-27 16:31:39] Set ATHENA_CORE_NUMBER=6
[2025-11-27 16:31:39] Starting ATLAS job with PandaID=6898487648
[2025-11-27 16:31:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 22:55:31]  *** The last 200 lines of the pilot log: ***
[2025-11-27 22:55:31] 2025-11-27 21:54:40,354 | INFO     | time since job start (22974s) is within the limit (172800.0s)
[2025-11-27 22:55:31] 2025-11-27 21:54:41,806 | INFO     | monitor loop #1742: job 0:6898487648 is in state 'finished'
[2025-11-27 22:55:31] 2025-11-27 21:54:41,807 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 22:55:31] 2025-11-27 21:54:42,359 | INFO     | time since job start (22976s) is within the limit (172800.0s)
[2025-11-27 22:55:31] 2025-11-27 21:54:43,309 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 22:55:31] 2025-11-27 21:54:43,310 | INFO     | found 6 cores (6 cores per socket, 1 socket) , CPU MHz: 4299.062999999999
[2025-11-27 22:55:31] 2025-11-27 21:54:43,310 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6898487648/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 22:55:31] 2025-11-27 21:54:43,310 | INFO     | extracted standard info from prmon json
[2025-11-27 22:55:31] 2025-11-27 21:54:43,311 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 22:55:31] 2025-11-27 21:54:43,311 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 22:55:31] 2025-11-27 21:54:43,313 | INFO     | fitting pss+swap vs Time
[2025-11-27 22:55:31] 2025-11-27 21:54:43,313 | INFO     | sum of square deviations: 16614964548.0
[2025-11-27 22:55:31] 2025-11-27 21:54:43,314 | INFO     | sum of deviations: 196345462636.00003
[2025-11-27 22:55:31] 2025-11-27 21:54:43,314 | INFO     | mean x: 1764268994.0
[2025-11-27 22:55:31] 2025-11-27 21:54:43,314 | INFO     | mean y: 2721180.766578249
[2025-11-27 22:55:31] 2025-11-27 21:54:43,315 | INFO     | intersect: -20846327930.384155
[2025-11-27 22:55:31] 2025-11-27 21:54:43,315 | INFO     | chi2: 2.8214041952890465
[2025-11-27 22:55:31] 2025-11-27 21:54:43,315 | INFO     | sum of square deviations: 15962617433.0
[2025-11-27 22:55:31] 2025-11-27 21:54:43,316 | INFO     | sum of deviations: 254963976001.50003
[2025-11-27 22:55:31] 2025-11-27 21:54:43,316 | INFO     | mean x: 1764268841.5
[2025-11-27 22:55:31] 2025-11-27 21:54:43,316 | INFO     | mean y: 2734788.938172043
[2025-11-27 22:55:31] 2025-11-27 21:54:43,316 | INFO     | intersect: -28177167439.03
[2025-11-27 22:55:31] 2025-11-27 21:54:43,316 | INFO     | chi2: 1.415894643458389
[2025-11-27 22:55:31] 2025-11-27 21:54:43,316 | INFO     | current chi2=1.415894643458389 (change=49.815958811483455 %)
[2025-11-27 22:55:31] 2025-11-27 21:54:43,317 | INFO     | sum of square deviations: 15327572968.0
[2025-11-27 22:55:31] 2025-11-27 21:54:43,318 | INFO     | sum of deviations: 248308960212.0
[2025-11-27 22:55:31] 2025-11-27 21:54:43,318 | INFO     | mean x: 1764268689.0
[2025-11-27 22:55:31] 2025-11-27 21:54:43,318 | INFO     | mean y: 2733190.833787466
[2025-11-27 22:55:31] 2025-11-27 21:54:43,318 | INFO     | intersect: -28578681793.442177
[2025-11-27 22:55:31] 2025-11-27 21:54:43,318 | INFO     | chi2: 1.4148082683747147
[2025-11-27 22:55:31] 2025-11-27 21:54:43,318 | INFO     | current chi2=1.4148082683747147 (change=0.07672711304428276 %)
[2025-11-27 22:55:31] 2025-11-27 21:54:43,318 | INFO     | right removable region: 366
[2025-11-27 22:55:31] 2025-11-27 21:54:43,318 | INFO     | sum of square deviations: 15962617433.0
[2025-11-27 22:55:31] 2025-11-27 21:54:43,320 | INFO     | sum of deviations: 135667833087.49998
[2025-11-27 22:55:31] 2025-11-27 21:54:43,320 | INFO     | mean x: 1764269146.5
[2025-11-27 22:55:31] 2025-11-27 21:54:43,320 | INFO     | mean y: 2735275.825268817
[2025-11-27 22:55:31] 2025-11-27 21:54:43,320 | INFO     | intersect: -14991959240.499046
[2025-11-27 22:55:31] 2025-11-27 21:54:43,320 | INFO     | chi2: 1.4776983887299107
[2025-11-27 22:55:31] 2025-11-27 21:54:43,320 | INFO     | current chi2=1.4776983887299107 (change=47.625427395434784 %)
[2025-11-27 22:55:31] 2025-11-27 21:54:43,320 | INFO     | sum of square deviations: 15327572968.0
[2025-11-27 22:55:31] 2025-11-27 21:54:43,321 | INFO     | sum of deviations: 127891944555.00002
[2025-11-27 22:55:31] 2025-11-27 21:54:43,321 | INFO     | mean x: 1764269299.0
[2025-11-27 22:55:31] 2025-11-27 21:54:43,321 | INFO     | mean y: 2737140.8746594004
[2025-11-27 22:55:31] 2025-11-27 21:54:43,322 | INFO     | intersect: -14718173458.531122
[2025-11-27 22:55:31] 2025-11-27 21:54:43,322 | INFO     | chi2: 1.477228892075245
[2025-11-27 22:55:31] 2025-11-27 21:54:43,322 | INFO     | current chi2=1.477228892075245 (change=0.031772157176756716 %)
[2025-11-27 22:55:31] 2025-11-27 21:54:43,322 | INFO     | left removable region: 20
[2025-11-27 22:55:31] 2025-11-27 21:54:43,322 | INFO     | sum of square deviations: 12844082682.5
[2025-11-27 22:55:31] 2025-11-27 21:54:43,323 | INFO     | sum of deviations: 161352509709.99997
[2025-11-27 22:55:31] 2025-11-27 21:54:43,323 | INFO     | mean x: 1764269268.5
[2025-11-27 22:55:31] 2025-11-27 21:54:43,323 | INFO     | mean y: 2754425.4739884394
[2025-11-27 22:55:31] 2025-11-27 21:54:43,323 | INFO     | intersect: -22160702577.536533
[2025-11-27 22:55:31] 2025-11-27 21:54:43,323 | INFO     | chi2: 0.04376965838029499
[2025-11-27 22:55:31] 2025-11-27 21:54:43,323 | INFO     | current memory leak: 12.56 B/s (using 346 data points, chi2=0.04)
[2025-11-27 22:55:31] 2025-11-27 21:54:43,323 | INFO     | could have reported an average CPU frequency of 4299 MHz (16 samples)
[2025-11-27 22:55:31] 2025-11-27 21:54:43,324 | INFO     | ..............................
[2025-11-27 22:55:31] 2025-11-27 21:54:43,324 | INFO     | . Timing measurements:
[2025-11-27 22:55:31] 2025-11-27 21:54:43,324 | INFO     | . get job = 0 s
[2025-11-27 22:55:31] 2025-11-27 21:54:43,324 | INFO     | . initial setup = 1 s
[2025-11-27 22:55:31] 2025-11-27 21:54:43,324 | INFO     | . payload setup = 3 s
[2025-11-27 22:55:31] 2025-11-27 21:54:43,324 | INFO     | . stage-in = 0 s
[2025-11-27 22:55:31] 2025-11-27 21:54:43,324 | INFO     | . payload execution = 22944 s
[2025-11-27 22:55:31] 2025-11-27 21:54:43,324 | INFO     | . stage-out = 1 s
[2025-11-27 22:55:31] 2025-11-27 21:54:43,324 | INFO     | . log creation = 0 s
[2025-11-27 22:55:31] 2025-11-27 21:54:43,324 | INFO     | ..............................
[2025-11-27 22:55:31] 2025-11-27 21:54:43,354 | INFO     | 
[2025-11-27 22:55:31] 2025-11-27 21:54:43,354 | INFO     | job summary report
[2025-11-27 22:55:31] 2025-11-27 21:54:43,354 | INFO     | --------------------------------------------------
[2025-11-27 22:55:31] 2025-11-27 21:54:43,354 | INFO     | PanDA job id: 6898487648
[2025-11-27 22:55:31] 2025-11-27 21:54:43,354 | INFO     | task id: 47556161
[2025-11-27 22:55:31] 2025-11-27 21:54:43,354 | INFO     | errors: (none)
[2025-11-27 22:55:31] 2025-11-27 21:54:43,354 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 22:55:31] 2025-11-27 21:54:43,354 | INFO     | pilot state: finished 
[2025-11-27 22:55:31] 2025-11-27 21:54:43,354 | INFO     | transexitcode: 0
[2025-11-27 22:55:31] 2025-11-27 21:54:43,354 | INFO     | exeerrorcode: 0
[2025-11-27 22:55:31] 2025-11-27 21:54:43,354 | INFO     | exeerrordiag: 
[2025-11-27 22:55:31] 2025-11-27 21:54:43,354 | INFO     | exitcode: 0
[2025-11-27 22:55:31] 2025-11-27 21:54:43,354 | INFO     | exitmsg: OK
[2025-11-27 22:55:31] 2025-11-27 21:54:43,354 | INFO     | cpuconsumptiontime: 101954 s
[2025-11-27 22:55:31] 2025-11-27 21:54:43,354 | INFO     | nevents: 1000
[2025-11-27 22:55:31] 2025-11-27 21:54:43,354 | INFO     | neventsw: 0
[2025-11-27 22:55:31] 2025-11-27 21:54:43,354 | INFO     | pid: 2047543
[2025-11-27 22:55:31] 2025-11-27 21:54:43,354 | INFO     | pgrp: 2047543
[2025-11-27 22:55:31] 2025-11-27 21:54:43,355 | INFO     | corecount: 6
[2025-11-27 22:55:31] 2025-11-27 21:54:43,355 | INFO     | event service: False
[2025-11-27 22:55:31] 2025-11-27 21:54:43,355 | INFO     | sizes: {0: 2284145, 1: 2284344, 2: 2284606, 11: 2284634, 22951: 2320539, 22954: 2329745, 22963: 2329935}
[2025-11-27 22:55:31] 2025-11-27 21:54:43,355 | INFO     | --------------------------------------------------
[2025-11-27 22:55:31] 2025-11-27 21:54:43,355 | INFO     | 
[2025-11-27 22:55:31] 2025-11-27 21:54:43,355 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-11-27 22:55:31] 2025-11-27 21:54:43,362 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 22:55:31] 2025-11-27 21:54:43,362 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 22:55:31] 2025-11-27 21:54:43,362 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 22:55:31] 2025-11-27 21:54:43,362 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 22:55:31] 2025-11-27 21:54:43,362 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 22:55:31] 2025-11-27 21:54:43,362 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 22:55:31] 2025-11-27 21:54:43,362 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 22:55:31] 2025-11-27 21:54:43,362 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 22:55:31] 2025-11-27 21:54:43,363 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 22:55:31] 2025-11-27 21:54:43,363 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 22:55:31] 2025-11-27 21:54:43,363 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 22:55:31] 2025-11-27 21:54:43,363 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 22:55:31] 2025-11-27 21:54:43,363 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 22:55:31] 2025-11-27 21:54:43,363 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 22:55:31] 2025-11-27 21:54:43,363 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 22:55:31] 2025-11-27 21:54:43,363 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 22:55:31] 2025-11-27 21:54:43,363 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 22:55:31] 2025-11-27 21:54:43,363 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 22:55:31] 2025-11-27 21:54:43,363 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 22:55:31] 2025-11-27 21:54:43,363 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 22:55:31] 2025-11-27 21:54:43,363 | INFO     | job 6898487648 has completed (purged errors)
[2025-11-27 22:55:31] 2025-11-27 21:54:43,363 | INFO     | overall cleanup function is called
[2025-11-27 22:55:31] 2025-11-27 21:54:44,371 | INFO     | --- collectZombieJob: --- 10, [2047543]
[2025-11-27 22:55:31] 2025-11-27 21:54:44,372 | INFO     | zombie collector waiting for pid 2047543
[2025-11-27 22:55:31] 2025-11-27 21:54:44,372 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 22:55:31] 2025-11-27 21:54:44,372 | INFO     | collected zombie processes
[2025-11-27 22:55:31] 2025-11-27 21:54:44,372 | INFO     | will attempt to kill all subprocesses of pid=2047543
[2025-11-27 22:55:31] 2025-11-27 21:54:44,408 | INFO     | process IDs to be killed: [2047543] (in reverse order)
[2025-11-27 22:55:31] 2025-11-27 21:54:44,425 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 22:55:31] 2025-11-27 21:54:44,425 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 22:55:31] 2025-11-27 21:54:44,426 | INFO     | did not find any defunct processes belonging to 2047543
[2025-11-27 22:55:31] 2025-11-27 21:54:44,427 | INFO     | did not find any defunct processes belonging to 2047543
[2025-11-27 22:55:31] 2025-11-27 21:54:44,428 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 22:55:31] 2025-11-27 21:54:44,428 | INFO     | ready for new job
[2025-11-27 22:55:31] 2025-11-27 21:54:44,428 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 22:55:31] 2025-11-27 21:54:44,428 | INFO     | ***************************************
[2025-11-27 22:55:31] 2025-11-27 21:54:44,428 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 22:55:31] 2025-11-27 21:54:44,428 | INFO     | ***************************************
[2025-11-27 22:55:31] 2025-11-27 21:54:44,429 | INFO     | 
[2025-11-27 22:55:31] 2025-11-27 21:54:44,429 | INFO     | architecture information:
[2025-11-27 22:55:31] 2025-11-27 21:54:44,429 | INFO     | executing command: cat /etc/os-release
[2025-11-27 22:55:31] 2025-11-27 21:54:44,434 | INFO     | cat /etc/os-release:
[2025-11-27 22:55:31] NAME="CentOS Linux"
[2025-11-27 22:55:31] VERSION="7 (Core)"
[2025-11-27 22:55:31] ID="centos"
[2025-11-27 22:55:31] ID_LIKE="rhel fedora"
[2025-11-27 22:55:31] VERSION_ID="7"
[2025-11-27 22:55:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 22:55:31] ANSI_COLOR="0;31"
[2025-11-27 22:55:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 22:55:31] HOME_URL="https://www.centos.org/"
[2025-11-27 22:55:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 22:55:31] 
[2025-11-27 22:55:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 22:55:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 22:55:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 22:55:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 22:55:31] 
[2025-11-27 22:55:31] 2025-11-27 21:54:44,435 | INFO     | ***************************************
[2025-11-27 22:55:31] 2025-11-27 21:54:44,937 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-11-27 22:55:31] 2025-11-27 21:54:44,947 | INFO     | sufficient remaining disk space (870036013056 B)
[2025-11-27 22:55:31] 2025-11-27 21:54:44,947 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 22:55:31] 2025-11-27 21:54:44,947 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 22:55:31] 2025-11-27 21:54:44,947 | INFO     | update_server=False
[2025-11-27 22:55:31] 2025-11-27 21:54:44,947 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 22:55:31] 2025-11-27 21:54:44,947 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 22:55:31] 2025-11-27 21:54:45,031 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 22:55:31] 2025-11-27 21:54:45,054 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 22:55:31] 2025-11-27 21:54:45,062 | INFO     | all data control threads have been joined
[2025-11-27 22:55:31] 2025-11-27 21:54:45,312 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 22:55:31] 2025-11-27 21:54:45,312 | INFO     | aborting loop
[2025-11-27 22:55:31] 2025-11-27 21:54:45,526 | INFO     | all payload control threads have been joined
[2025-11-27 22:55:31] 2025-11-27 21:54:45,953 | INFO     | [job] retrieve thread has finished
[2025-11-27 22:55:31] 2025-11-27 21:54:45,953 | INFO     | [job] queue monitor thread has finished
[2025-11-27 22:55:31] 2025-11-27 21:54:45,983 | INFO     | [data] copytool_in thread has finished
[2025-11-27 22:55:31] 2025-11-27 21:54:46,068 | INFO     | [data] control thread has finished
[2025-11-27 22:55:31] 2025-11-27 21:54:46,256 | INFO     | all job control threads have been joined
[2025-11-27 22:55:31] 2025-11-27 21:54:46,318 | INFO     | [job] job monitor thread has finished
[2025-11-27 22:55:31] 2025-11-27 21:54:46,418 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 22:55:31] 2025-11-27 21:54:46,531 | INFO     | [payload] control thread has finished
[2025-11-27 22:55:31] 2025-11-27 21:54:46,996 | INFO     | [job] validate thread has finished
[2025-11-27 22:55:31] 2025-11-27 21:54:47,036 | INFO     | [data] copytool_out thread has finished
[2025-11-27 22:55:31] 2025-11-27 21:54:47,104 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 22:55:31] 2025-11-27 21:54:47,154 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 22:55:31] 2025-11-27 21:54:47,159 | INFO     | [payload] failed_post thread has finished
[2025-11-27 22:55:31] 2025-11-27 21:54:47,200 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 22:55:31] 2025-11-27 21:54:47,262 | INFO     | [job] control thread has finished
[2025-11-27 22:55:31] 2025-11-27 21:54:47,351 | INFO     | [payload] validate_post thread has finished
[2025-11-27 22:55:31] 2025-11-27 21:54:49,060 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 22:55:31] 2025-11-27 21:55:15,489 | INFO     | PID=2040972 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 22:55:31] 2025-11-27 21:55:15,490 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 22:55:31] 2025-11-27 21:55:15,490 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 22:55:31] 2025-11-27 21:55:15,490 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 22:55:31] 2025-11-27 21:55:24,557 | INFO     | [monitor] cgroup control has ended
[2025-11-27 22:55:31] 2025-11-27 21:55:26,252 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139675388659520)>', '<ExcThread(monitor, started 139674987247360)>']
[2025-11-27 22:55:31] 2025-11-27 21:55:26,515 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 22:55:31] 2025-11-27 21:55:26,516 | INFO     | [monitor] control thread has ended
[2025-11-27 22:55:31] 2025-11-27 21:55:31,271 | INFO     | all workflow threads have been joined
[2025-11-27 22:55:31] 2025-11-27 21:55:31,271 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 22:55:31] 2025-11-27 21:55:31,271 | INFO     | traces error code: 0
[2025-11-27 22:55:31] 2025-11-27 21:55:31,272 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 22:55:31] 2025-11-27 21:55:31,318 [wrapper] ==== pilot stdout END ====
[2025-11-27 22:55:31] 2025-11-27 21:55:31,320 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 22:55:31] 2025-11-27 21:55:31,321 [wrapper] pilotpid: 2040972
[2025-11-27 22:55:31] 2025-11-27 21:55:31,322 [wrapper] Pilot exit status: 0
[2025-11-27 22:55:31] 2025-11-27 21:55:31,325 [wrapper] pandaids: 6898487648
[2025-11-27 22:55:31] 2025-11-27 21:55:31,335 [wrapper] cleanup supervisor_pilot 2085736 2040973
[2025-11-27 22:55:31] 2025-11-27 21:55:31,336 [wrapper] Test setup, not cleaning
[2025-11-27 22:55:31] 2025-11-27 21:55:31,337 [wrapper] apfmon messages muted
[2025-11-27 22:55:31] 2025-11-27 21:55:31,338 [wrapper] ==== wrapper stdout END ====
[2025-11-27 22:55:31] 2025-11-27 21:55:31,339 [wrapper] ==== wrapper stderr END ====
[2025-11-27 22:55:31]  *** Error codes and diagnostics ***
[2025-11-27 22:55:31]     "exeErrorCode": 0,
[2025-11-27 22:55:31]     "exeErrorDiag": "",
[2025-11-27 22:55:31]     "pilotErrorCode": 0,
[2025-11-27 22:55:31]     "pilotErrorDiag": "",
[2025-11-27 22:55:31]  *** Listing of results directory ***
[2025-11-27 22:55:31] total 1309780
[2025-11-27 22:55:31] -rw-r--r-- 1 boinc boinc    576529 Nov 26 17:12 pilot3.tar.gz
[2025-11-27 22:55:31] -rwx------ 1 boinc boinc     36292 Nov 26 17:39 runpilot2-wrapper.sh
[2025-11-27 22:55:31] -rw-r--r-- 1 boinc boinc      5112 Nov 26 17:41 queuedata.json
[2025-11-27 22:55:31] -rw-r--r-- 1 boinc boinc       100 Nov 27 16:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 22:55:31] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 16:31 run_atlas
[2025-11-27 22:55:31] -rw-r--r-- 1 boinc boinc       105 Nov 27 16:31 job.xml
[2025-11-27 22:55:31] -rw-r--r-- 2 boinc boinc     15847 Nov 27 16:31 start_atlas.sh
[2025-11-27 22:55:31] drwxrwx--x 2 boinc boinc        68 Nov 27 16:31 shared
[2025-11-27 22:55:31] -rw-r--r-- 2 boinc boinc    590108 Nov 27 16:31 input.tar.gz
[2025-11-27 22:55:31] -rw-r--r-- 1 boinc boinc      6551 Nov 27 16:31 init_data.xml
[2025-11-27 22:55:31] -rw-r--r-- 2 boinc boinc 411174399 Nov 27 16:31 EVNT.47483658._002637.pool.root.1
[2025-11-27 22:55:31] -rw-r--r-- 1 boinc boinc         0 Nov 27 16:31 boinc_lockfile
[2025-11-27 22:55:31] -rw-r--r-- 1 boinc boinc      2787 Nov 27 16:31 pandaJob.out
[2025-11-27 22:55:31] -rw------- 1 boinc boinc    991572 Nov 27 16:31 agis_schedconf.cvmfs.json
[2025-11-27 22:55:31] drwx------ 5 boinc boinc      4096 Nov 27 16:31 pilot3
[2025-11-27 22:55:31] -rw-r--r-- 1 boinc boinc       532 Nov 27 22:51 boinc_task_state.xml
[2025-11-27 22:55:31] -rw------- 1 boinc boinc 916781981 Nov 27 22:54 HITS.47556161._006200.pool.root.1
[2025-11-27 22:55:31] -rw------- 1 boinc boinc      1046 Nov 27 22:54 memory_monitor_summary.json
[2025-11-27 22:55:31] -rw------- 1 boinc boinc   1516240 Nov 27 22:54 agis_ddmendpoints.agis.ALL.json
[2025-11-27 22:55:31] -rw------- 1 boinc boinc   1433488 Nov 27 22:54 log.47556161._006200.job.log.tgz.1
[2025-11-27 22:55:31] -rw------- 1 boinc boinc      8618 Nov 27 22:54 heartbeat.json
[2025-11-27 22:55:31] -rw------- 1 boinc boinc        95 Nov 27 22:55 pilot_heartbeat.json
[2025-11-27 22:55:31] -rw-r--r-- 1 boinc boinc        29 Nov 27 22:55 wrapper_checkpoint.txt
[2025-11-27 22:55:31] -rw-r--r-- 1 boinc boinc      8192 Nov 27 22:55 boinc_mmap_file
[2025-11-27 22:55:31] -rw------- 1 boinc boinc      4749 Nov 27 22:55 pilotlog.txt
[2025-11-27 22:55:31] -rw------- 1 boinc boinc   3243209 Nov 27 22:55 log.47556161._006200.job.log.1
[2025-11-27 22:55:31] -rw------- 1 boinc boinc       353 Nov 27 22:55 output.list
[2025-11-27 22:55:31] -rw-r--r-- 1 boinc boinc       620 Nov 27 22:55 runtime_log
[2025-11-27 22:55:31] -rw------- 1 boinc boinc   4700160 Nov 27 22:55 result.tar.gz
[2025-11-27 22:55:31] -rw-r--r-- 1 boinc boinc      8831 Nov 27 22:55 runtime_log.err
[2025-11-27 22:55:31] -rw------- 1 boinc boinc       664 Nov 27 22:55 EPENDmviXi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmnINKDmNiExDo.diag
[2025-11-27 22:55:31] -rw-r--r-- 1 boinc boinc     21409 Nov 27 22:55 stderr.txt
[2025-11-27 22:55:31] HITS file was successfully produced:
[2025-11-27 22:55:31] -rw------- 1 boinc boinc 916781981 Nov 27 22:54 shared/HITS.pool.root.1
[2025-11-27 22:55:31]  *** Contents of shared directory: ***
[2025-11-27 22:55:31] total 1302024
[2025-11-27 22:55:31] -rw-r--r-- 2 boinc boinc     15847 Nov 27 16:31 start_atlas.sh
[2025-11-27 22:55:31] -rw-r--r-- 2 boinc boinc    590108 Nov 27 16:31 input.tar.gz
[2025-11-27 22:55:31] -rw-r--r-- 2 boinc boinc 411174399 Nov 27 16:31 ATLAS.root_0
[2025-11-27 22:55:31] -rw------- 1 boinc boinc 916781981 Nov 27 22:54 HITS.pool.root.1
[2025-11-27 22:55:31] -rw------- 1 boinc boinc   4700160 Nov 27 22:55 result.tar.gz
22:55:32 (2037280): run_atlas exited; CPU time 101949.838134
22:55:32 (2037280): called boinc_finish(0)

</stderr_txt>
]]>

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