Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:52:01 (1681430): wrapper (7.7.26015): starting
00:52:01 (1681430): wrapper: running run_atlas (--nthreads 8)
[2025-11-28 00:52:01] Arguments: --nthreads 8
[2025-11-28 00:52:01] Threads: 8
[2025-11-28 00:52:01] Checking for CVMFS
[2025-11-28 00:52:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 00:52:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 00:52:01] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 00:52:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 00:52:01] 2.13.2.0 6818 9183 76912 153390 3 81 2269638 4097024 0 130560 0 4179921 99.983 340309 12328 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-28 00:52:01] CVMFS is ok
[2025-11-28 00:52:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-28 00:52:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-28 00:52:01] Further information can be found at the LHC@home message board.
[2025-11-28 00:52:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 00:52:01] Checking for apptainer binary...
[2025-11-28 00:52:01] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-11-28 00:52:01] apptainer is not installed, using version from CVMFS
[2025-11-28 00:52:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 00:52:01] pckeatlas02
[2025-11-28 00:52:01] apptainer works
[2025-11-28 00:52:01] Set ATHENA_PROC_NUMBER=8
[2025-11-28 00:52:01] Set ATHENA_CORE_NUMBER=8
[2025-11-28 00:52:01] Starting ATLAS job with PandaID=6898488756
[2025-11-28 00:52:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 08:31:21]  *** The last 200 lines of the pilot log: ***
[2025-11-28 08:31:21] 2025-11-28 07:30:46,984 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-28 08:31:21] 2025-11-28 07:30:48,280 | INFO     | time since job start (27523s) is within the limit (172800.0s)
[2025-11-28 08:31:21] 2025-11-28 07:30:48,682 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 08:31:21] 2025-11-28 07:30:48,683 | INFO     | found 4 cores (4 cores per socket, 1 socket) HT, CPU MHz: 3830.7846250000007
[2025-11-28 08:31:21] 2025-11-28 07:30:48,684 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-6898488756/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 08:31:21] 2025-11-28 07:30:48,684 | INFO     | extracted standard info from prmon json
[2025-11-28 08:31:21] 2025-11-28 07:30:48,684 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 08:31:21] 2025-11-28 07:30:48,684 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 08:31:21] 2025-11-28 07:30:48,687 | INFO     | fitting pss+swap vs Time
[2025-11-28 08:31:21] 2025-11-28 07:30:48,688 | INFO     | sum of square deviations: 28444998450.0
[2025-11-28 08:31:21] 2025-11-28 07:30:48,690 | INFO     | sum of deviations: 387515239606.0
[2025-11-28 08:31:21] 2025-11-28 07:30:48,690 | INFO     | mean x: 1764301269.0
[2025-11-28 08:31:21] 2025-11-28 07:30:48,690 | INFO     | mean y: 3020766.9024390243
[2025-11-28 08:31:21] 2025-11-28 07:30:48,690 | INFO     | intersect: -24032615241.1461
[2025-11-28 08:31:21] 2025-11-28 07:30:48,690 | INFO     | chi2: 2.8751301453869647
[2025-11-28 08:31:21] 2025-11-28 07:30:48,690 | INFO     | sum of square deviations: 27509380907.5
[2025-11-28 08:31:21] 2025-11-28 07:30:48,692 | INFO     | sum of deviations: 469489180187.49994
[2025-11-28 08:31:21] 2025-11-28 07:30:48,692 | INFO     | mean x: 1764301116.5
[2025-11-28 08:31:21] 2025-11-28 07:30:48,692 | INFO     | mean y: 3034060.307174888
[2025-11-28 08:31:21] 2025-11-28 07:30:48,692 | INFO     | intersect: -30107432168.45653
[2025-11-28 08:31:21] 2025-11-28 07:30:48,693 | INFO     | chi2: 1.3521902955841323
[2025-11-28 08:31:21] 2025-11-28 07:30:48,693 | INFO     | current chi2=1.3521902955841323 (change=52.9694230449474 %)
[2025-11-28 08:31:21] 2025-11-28 07:30:48,693 | INFO     | sum of square deviations: 26594507940.0
[2025-11-28 08:31:21] 2025-11-28 07:30:48,695 | INFO     | sum of deviations: 459160157943.9998
[2025-11-28 08:31:21] 2025-11-28 07:30:48,695 | INFO     | mean x: 1764300964.0
[2025-11-28 08:31:21] 2025-11-28 07:30:48,695 | INFO     | mean y: 3032338.344671202
[2025-11-28 08:31:21] 2025-11-28 07:30:48,695 | INFO     | intersect: -30458020414.300888
[2025-11-28 08:31:21] 2025-11-28 07:30:48,695 | INFO     | chi2: 1.3501454646669862
[2025-11-28 08:31:21] 2025-11-28 07:30:48,695 | INFO     | current chi2=1.3501454646669862 (change=0.15122360542180852 %)
[2025-11-28 08:31:21] 2025-11-28 07:30:48,695 | INFO     | right removable region: 440
[2025-11-28 08:31:21] 2025-11-28 07:30:48,696 | INFO     | sum of square deviations: 27509380907.5
[2025-11-28 08:31:21] 2025-11-28 07:30:48,698 | INFO     | sum of deviations: 305084401216.5
[2025-11-28 08:31:21] 2025-11-28 07:30:48,698 | INFO     | mean x: 1764301421.5
[2025-11-28 08:31:21] 2025-11-28 07:30:48,698 | INFO     | mean y: 3034139.715246637
[2025-11-28 08:31:21] 2025-11-28 07:30:48,698 | INFO     | intersect: -19563412831.72492
[2025-11-28 08:31:21] 2025-11-28 07:30:48,698 | INFO     | chi2: 1.6079464056716837
[2025-11-28 08:31:21] 2025-11-28 07:30:48,698 | INFO     | current chi2=1.6079464056716837 (change=44.073961025674905 %)
[2025-11-28 08:31:21] 2025-11-28 07:30:48,698 | INFO     | sum of square deviations: 26594507940.0
[2025-11-28 08:31:21] 2025-11-28 07:30:48,700 | INFO     | sum of deviations: 285877083526.00006
[2025-11-28 08:31:21] 2025-11-28 07:30:48,700 | INFO     | mean x: 1764301574.0
[2025-11-28 08:31:21] 2025-11-28 07:30:48,700 | INFO     | mean y: 3037338.5804988663
[2025-11-28 08:31:21] 2025-11-28 07:30:48,700 | INFO     | intersect: -18962283981.647373
[2025-11-28 08:31:21] 2025-11-28 07:30:48,701 | INFO     | chi2: 1.5992262969312652
[2025-11-28 08:31:21] 2025-11-28 07:30:48,701 | INFO     | current chi2=1.5992262969312652 (change=0.5423133948781009 %)
[2025-11-28 08:31:21] 2025-11-28 07:30:48,701 | INFO     | left removable region: 20
[2025-11-28 08:31:21] 2025-11-28 07:30:48,701 | INFO     | sum of square deviations: 22973323765.0
[2025-11-28 08:31:21] 2025-11-28 07:30:48,703 | INFO     | sum of deviations: 331788762409.5001
[2025-11-28 08:31:21] 2025-11-28 07:30:48,703 | INFO     | mean x: 1764301543.5
[2025-11-28 08:31:21] 2025-11-28 07:30:48,703 | INFO     | mean y: 3053707.4595238096
[2025-11-28 08:31:21] 2025-11-28 07:30:48,703 | INFO     | intersect: -25477605148.13276
[2025-11-28 08:31:21] 2025-11-28 07:30:48,703 | INFO     | chi2: 0.06353659183520957
[2025-11-28 08:31:21] 2025-11-28 07:30:48,703 | INFO     | current memory leak: 14.44 B/s (using 420 data points, chi2=0.06)
[2025-11-28 08:31:21] 2025-11-28 07:30:48,703 | INFO     | could have reported an average CPU frequency of 3796 MHz (19 samples)
[2025-11-28 08:31:21] 2025-11-28 07:30:48,703 | INFO     | ..............................
[2025-11-28 08:31:21] 2025-11-28 07:30:48,703 | INFO     | . Timing measurements:
[2025-11-28 08:31:21] 2025-11-28 07:30:48,703 | INFO     | . get job = 0 s
[2025-11-28 08:31:21] 2025-11-28 07:30:48,703 | INFO     | . initial setup = 0 s
[2025-11-28 08:31:21] 2025-11-28 07:30:48,703 | INFO     | . payload setup = 3 s
[2025-11-28 08:31:21] 2025-11-28 07:30:48,704 | INFO     | . stage-in = 0 s
[2025-11-28 08:31:21] 2025-11-28 07:30:48,704 | INFO     | . payload execution = 27498 s
[2025-11-28 08:31:21] 2025-11-28 07:30:48,704 | INFO     | . stage-out = 0 s
[2025-11-28 08:31:21] 2025-11-28 07:30:48,704 | INFO     | . log creation = 0 s
[2025-11-28 08:31:21] 2025-11-28 07:30:48,704 | INFO     | ..............................
[2025-11-28 08:31:21] 2025-11-28 07:30:48,739 | INFO     | 
[2025-11-28 08:31:21] 2025-11-28 07:30:48,739 | INFO     | job summary report
[2025-11-28 08:31:21] 2025-11-28 07:30:48,739 | INFO     | --------------------------------------------------
[2025-11-28 08:31:21] 2025-11-28 07:30:48,739 | INFO     | PanDA job id: 6898488756
[2025-11-28 08:31:21] 2025-11-28 07:30:48,739 | INFO     | task id: 47556161
[2025-11-28 08:31:21] 2025-11-28 07:30:48,739 | INFO     | errors: (none)
[2025-11-28 08:31:21] 2025-11-28 07:30:48,739 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 08:31:21] 2025-11-28 07:30:48,739 | INFO     | pilot state: finished 
[2025-11-28 08:31:21] 2025-11-28 07:30:48,739 | INFO     | transexitcode: 0
[2025-11-28 08:31:21] 2025-11-28 07:30:48,739 | INFO     | exeerrorcode: 0
[2025-11-28 08:31:21] 2025-11-28 07:30:48,739 | INFO     | exeerrordiag: 
[2025-11-28 08:31:21] 2025-11-28 07:30:48,739 | INFO     | exitcode: 0
[2025-11-28 08:31:21] 2025-11-28 07:30:48,739 | INFO     | exitmsg: OK
[2025-11-28 08:31:21] 2025-11-28 07:30:48,739 | INFO     | cpuconsumptiontime: 214511 s
[2025-11-28 08:31:21] 2025-11-28 07:30:48,739 | INFO     | nevents: 1000
[2025-11-28 08:31:21] 2025-11-28 07:30:48,739 | INFO     | neventsw: 0
[2025-11-28 08:31:21] 2025-11-28 07:30:48,739 | INFO     | pid: 1692501
[2025-11-28 08:31:21] 2025-11-28 07:30:48,739 | INFO     | pgrp: 1692501
[2025-11-28 08:31:21] 2025-11-28 07:30:48,740 | INFO     | corecount: 8
[2025-11-28 08:31:21] 2025-11-28 07:30:48,740 | INFO     | event service: False
[2025-11-28 08:31:21] 2025-11-28 07:30:48,740 | INFO     | sizes: {0: 2284317, 2: 2284579, 11: 2284607, 27505: 2322674, 27506: 2322673, 27507: 2331909, 27510: 2332099}
[2025-11-28 08:31:21] 2025-11-28 07:30:48,740 | INFO     | --------------------------------------------------
[2025-11-28 08:31:21] 2025-11-28 07:30:48,740 | INFO     | 
[2025-11-28 08:31:21] 2025-11-28 07:30:48,740 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-11-28 08:31:21] 2025-11-28 07:30:48,749 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 08:31:21] 2025-11-28 07:30:48,749 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 08:31:21] 2025-11-28 07:30:48,749 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 08:31:21] 2025-11-28 07:30:48,749 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 08:31:21] 2025-11-28 07:30:48,749 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 08:31:21] 2025-11-28 07:30:48,749 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 08:31:21] 2025-11-28 07:30:48,749 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 08:31:21] 2025-11-28 07:30:48,749 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 08:31:21] 2025-11-28 07:30:48,749 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 08:31:21] 2025-11-28 07:30:48,749 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 08:31:21] 2025-11-28 07:30:48,749 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 08:31:21] 2025-11-28 07:30:48,749 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 08:31:21] 2025-11-28 07:30:48,749 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 08:31:21] 2025-11-28 07:30:48,749 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 08:31:21] 2025-11-28 07:30:48,749 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 08:31:21] 2025-11-28 07:30:48,749 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 08:31:21] 2025-11-28 07:30:48,749 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 08:31:21] 2025-11-28 07:30:48,749 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 08:31:21] 2025-11-28 07:30:48,749 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 08:31:21] 2025-11-28 07:30:48,750 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 08:31:21] 2025-11-28 07:30:48,750 | INFO     | job 6898488756 has completed (purged errors)
[2025-11-28 08:31:21] 2025-11-28 07:30:48,750 | INFO     | overall cleanup function is called
[2025-11-28 08:31:21] 2025-11-28 07:30:49,759 | INFO     | --- collectZombieJob: --- 10, [1692501]
[2025-11-28 08:31:21] 2025-11-28 07:30:49,759 | INFO     | zombie collector waiting for pid 1692501
[2025-11-28 08:31:21] 2025-11-28 07:30:49,760 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 08:31:21] 2025-11-28 07:30:49,760 | INFO     | collected zombie processes
[2025-11-28 08:31:21] 2025-11-28 07:30:49,760 | INFO     | will attempt to kill all subprocesses of pid=1692501
[2025-11-28 08:31:21] 2025-11-28 07:30:49,790 | INFO     | process IDs to be killed: [1692501] (in reverse order)
[2025-11-28 08:31:21] 2025-11-28 07:30:49,805 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 08:31:21] 2025-11-28 07:30:49,805 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 08:31:21] 2025-11-28 07:30:49,806 | INFO     | did not find any defunct processes belonging to 1692501
[2025-11-28 08:31:21] 2025-11-28 07:30:49,807 | INFO     | did not find any defunct processes belonging to 1692501
[2025-11-28 08:31:21] 2025-11-28 07:30:49,807 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 08:31:21] 2025-11-28 07:30:49,807 | INFO     | ready for new job
[2025-11-28 08:31:21] 2025-11-28 07:30:49,807 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 08:31:21] 2025-11-28 07:30:49,808 | INFO     | ***************************************
[2025-11-28 08:31:21] 2025-11-28 07:30:49,808 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 08:31:21] 2025-11-28 07:30:49,808 | INFO     | ***************************************
[2025-11-28 08:31:21] 2025-11-28 07:30:49,808 | INFO     | 
[2025-11-28 08:31:21] 2025-11-28 07:30:49,809 | INFO     | architecture information:
[2025-11-28 08:31:21] 2025-11-28 07:30:49,809 | INFO     | executing command: cat /etc/os-release
[2025-11-28 08:31:21] 2025-11-28 07:30:49,815 | INFO     | cat /etc/os-release:
[2025-11-28 08:31:21] NAME="CentOS Linux"
[2025-11-28 08:31:21] VERSION="7 (Core)"
[2025-11-28 08:31:21] ID="centos"
[2025-11-28 08:31:21] ID_LIKE="rhel fedora"
[2025-11-28 08:31:21] VERSION_ID="7"
[2025-11-28 08:31:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 08:31:21] ANSI_COLOR="0;31"
[2025-11-28 08:31:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 08:31:21] HOME_URL="https://www.centos.org/"
[2025-11-28 08:31:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 08:31:21] 
[2025-11-28 08:31:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 08:31:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 08:31:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 08:31:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 08:31:21] 
[2025-11-28 08:31:21] 2025-11-28 07:30:49,815 | INFO     | ***************************************
[2025-11-28 08:31:21] 2025-11-28 07:30:50,318 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-11-28 08:31:21] 2025-11-28 07:30:50,325 | INFO     | sufficient remaining disk space (115874988032 B)
[2025-11-28 08:31:21] 2025-11-28 07:30:50,325 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 08:31:21] 2025-11-28 07:30:50,325 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 08:31:21] 2025-11-28 07:30:50,325 | INFO     | update_server=False
[2025-11-28 08:31:21] 2025-11-28 07:30:50,325 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 08:31:21] 2025-11-28 07:30:50,325 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 08:31:21] 2025-11-28 07:30:50,325 | INFO     | aborting loop
[2025-11-28 08:31:21] 2025-11-28 07:30:50,325 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 08:31:21] 2025-11-28 07:30:50,530 | INFO     | all data control threads have been joined
[2025-11-28 08:31:21] 2025-11-28 07:30:50,787 | INFO     | [monitor] cgroup control has ended
[2025-11-28 08:31:21] 2025-11-28 07:30:51,092 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 08:31:21] 2025-11-28 07:30:51,126 | INFO     | all payload control threads have been joined
[2025-11-28 08:31:21] 2025-11-28 07:30:51,330 | INFO     | [job] retrieve thread has finished
[2025-11-28 08:31:21] 2025-11-28 07:30:51,331 | INFO     | [job] job monitor thread has finished
[2025-11-28 08:31:21] 2025-11-28 07:30:51,331 | INFO     | [job] queue monitor thread has finished
[2025-11-28 08:31:21] 2025-11-28 07:30:51,347 | INFO     | [data] copytool_in thread has finished
[2025-11-28 08:31:21] 2025-11-28 07:30:51,535 | INFO     | [data] control thread has finished
[2025-11-28 08:31:21] 2025-11-28 07:30:51,663 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 08:31:21] 2025-11-28 07:30:51,703 | INFO     | [payload] validate_post thread has finished
[2025-11-28 08:31:21] 2025-11-28 07:30:51,706 | INFO     | all job control threads have been joined
[2025-11-28 08:31:21] 2025-11-28 07:30:52,131 | INFO     | [payload] control thread has finished
[2025-11-28 08:31:21] 2025-11-28 07:30:52,242 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 08:31:21] 2025-11-28 07:30:52,308 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 08:31:21] 2025-11-28 07:30:52,316 | INFO     | [job] validate thread has finished
[2025-11-28 08:31:21] 2025-11-28 07:30:52,386 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 08:31:21] 2025-11-28 07:30:52,649 | INFO     | [payload] failed_post thread has finished
[2025-11-28 08:31:21] 2025-11-28 07:30:52,711 | INFO     | [job] control thread has finished
[2025-11-28 08:31:21] 2025-11-28 07:30:53,098 | INFO     | [data] copytool_out thread has finished
[2025-11-28 08:31:21] 2025-11-28 07:30:55,669 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 08:31:21] 2025-11-28 07:31:00,729 | INFO     | job.realtimelogging is not enabled
[2025-11-28 08:31:21] 2025-11-28 07:31:01,734 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 08:31:21] 2025-11-28 07:31:01,956 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140190324352832)>', '<ExcThread(monitor, started 140189787735808)>']
[2025-11-28 08:31:21] 2025-11-28 07:31:06,982 | INFO     | all workflow threads have been joined
[2025-11-28 08:31:21] 2025-11-28 07:31:06,982 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 08:31:21] 2025-11-28 07:31:06,982 | INFO     | traces error code: 0
[2025-11-28 08:31:21] 2025-11-28 07:31:06,982 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 08:31:21] 2025-11-28 07:31:20,366 | INFO     | 27525s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-28 08:31:21] 2025-11-28 07:31:21,409 | INFO     | PID=1685198 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 08:31:21] 2025-11-28 07:31:21,410 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 08:31:21] 2025-11-28 07:31:21,410 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 08:31:21] 2025-11-28 07:31:21,410 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 08:31:21] 2025-11-28 07:31:21,410 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 08:31:21] 2025-11-28 07:31:21,410 | INFO     | [monitor] control thread has ended
[2025-11-28 08:31:21] 2025-11-28 07:31:21,486 [wrapper] ==== pilot stdout END ====
[2025-11-28 08:31:21] 2025-11-28 07:31:21,487 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 08:31:21] 2025-11-28 07:31:21,488 [wrapper] pilotpid: 1685198
[2025-11-28 08:31:21] 2025-11-28 07:31:21,489 [wrapper] Pilot exit status: 0
[2025-11-28 08:31:21] 2025-11-28 07:31:21,496 [wrapper] pandaids: 6898488756
[2025-11-28 08:31:21] 2025-11-28 07:31:21,505 [wrapper] cleanup supervisor_pilot 1760939 1685199
[2025-11-28 08:31:21] 2025-11-28 07:31:21,506 [wrapper] Test setup, not cleaning
[2025-11-28 08:31:21] 2025-11-28 07:31:21,508 [wrapper] apfmon messages muted
[2025-11-28 08:31:21] 2025-11-28 07:31:21,509 [wrapper] ==== wrapper stdout END ====
[2025-11-28 08:31:21] 2025-11-28 07:31:21,510 [wrapper] ==== wrapper stderr END ====
[2025-11-28 08:31:21]  *** Error codes and diagnostics ***
[2025-11-28 08:31:21]     "exeErrorCode": 0,
[2025-11-28 08:31:21]     "exeErrorDiag": "",
[2025-11-28 08:31:21]     "pilotErrorCode": 0,
[2025-11-28 08:31:21]     "pilotErrorDiag": "",
[2025-11-28 08:31:21]  *** Listing of results directory ***
[2025-11-28 08:31:21] total 1312020
[2025-11-28 08:31:21] -rw-r--r--. 1 boinc boinc    576529 Nov 26 17:12 pilot3.tar.gz
[2025-11-28 08:31:21] -rwx------. 1 boinc boinc     36292 Nov 26 17:36 runpilot2-wrapper.sh
[2025-11-28 08:31:21] -rw-r--r--. 1 boinc boinc      5112 Nov 26 17:37 queuedata.json
[2025-11-28 08:31:21] -rw-r--r--. 1 boinc boinc       100 Nov 28 00:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 08:31:21] -rwxr-xr-x. 1 boinc boinc      7986 Nov 28 00:52 run_atlas
[2025-11-28 08:31:21] -rw-r--r--. 1 boinc boinc       105 Nov 28 00:52 job.xml
[2025-11-28 08:31:21] -rw-r--r--. 2 boinc boinc 410219842 Nov 28 00:52 EVNT.47483658._002642.pool.root.1
[2025-11-28 08:31:21] -rw-r--r--. 1 boinc boinc      6277 Nov 28 00:52 init_data.xml
[2025-11-28 08:31:21] -rw-r--r--. 2 boinc boinc     15847 Nov 28 00:52 start_atlas.sh
[2025-11-28 08:31:21] drwxrwx--x. 2 boinc boinc        68 Nov 28 00:52 shared
[2025-11-28 08:31:21] -rw-r--r--. 2 boinc boinc    590106 Nov 28 00:52 input.tar.gz
[2025-11-28 08:31:21] -rw-r--r--. 1 boinc boinc         0 Nov 28 00:52 boinc_lockfile
[2025-11-28 08:31:21] -rw-r--r--. 1 boinc boinc      2787 Nov 28 00:52 pandaJob.out
[2025-11-28 08:31:21] -rw-------. 1 boinc boinc    991532 Nov 28 00:52 agis_schedconf.cvmfs.json
[2025-11-28 08:31:21] drwx------. 5 boinc boinc      4096 Nov 28 00:52 pilot3
[2025-11-28 08:31:21] -rw-r--r--. 1 boinc boinc       532 Nov 28 08:26 boinc_task_state.xml
[2025-11-28 08:31:21] -rw-------. 1 boinc boinc 918218857 Nov 28 08:30 HITS.47556161._006245.pool.root.1
[2025-11-28 08:31:21] -rw-------. 1 boinc boinc      1038 Nov 28 08:30 memory_monitor_summary.json
[2025-11-28 08:31:21] -rw-------. 1 boinc boinc   1516240 Nov 28 08:30 agis_ddmendpoints.agis.ALL.json
[2025-11-28 08:31:21] -rw-------. 1 boinc boinc   1712185 Nov 28 08:30 log.47556161._006245.job.log.tgz.1
[2025-11-28 08:31:21] -rw-------. 1 boinc boinc      8623 Nov 28 08:30 heartbeat.json
[2025-11-28 08:31:21] -rw-------. 1 boinc boinc        95 Nov 28 08:30 pilot_heartbeat.json
[2025-11-28 08:31:21] -rw-r--r--. 1 boinc boinc      8192 Nov 28 08:30 boinc_mmap_file
[2025-11-28 08:31:21] -rw-r--r--. 1 boinc boinc        29 Nov 28 08:30 wrapper_checkpoint.txt
[2025-11-28 08:31:21] -rw-------. 1 boinc boinc       863 Nov 28 08:31 pilotlog.txt
[2025-11-28 08:31:21] -rw-------. 1 boinc boinc   3872479 Nov 28 08:31 log.47556161._006245.job.log.1
[2025-11-28 08:31:21] -rw-------. 1 boinc boinc       353 Nov 28 08:31 output.list
[2025-11-28 08:31:21] -rw-r--r--. 1 boinc boinc       620 Nov 28 08:31 runtime_log
[2025-11-28 08:31:21] -rw-------. 1 boinc boinc   5601280 Nov 28 08:31 result.tar.gz
[2025-11-28 08:31:21] -rw-r--r--. 1 boinc boinc      8847 Nov 28 08:31 runtime_log.err
[2025-11-28 08:31:21] -rw-------. 1 boinc boinc       663 Nov 28 08:31 gqgNDm1fXi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmlCNKDmbsahFn.diag
[2025-11-28 08:31:21] -rw-r--r--. 1 boinc boinc     21450 Nov 28 08:31 stderr.txt
[2025-11-28 08:31:21] HITS file was successfully produced:
[2025-11-28 08:31:21] -rw-------. 1 boinc boinc 918218857 Nov 28 08:30 shared/HITS.pool.root.1
[2025-11-28 08:31:21]  *** Contents of shared directory: ***
[2025-11-28 08:31:21] total 1303376
[2025-11-28 08:31:21] -rw-r--r--. 2 boinc boinc 410219842 Nov 28 00:52 ATLAS.root_0
[2025-11-28 08:31:21] -rw-r--r--. 2 boinc boinc     15847 Nov 28 00:52 start_atlas.sh
[2025-11-28 08:31:21] -rw-r--r--. 2 boinc boinc    590106 Nov 28 00:52 input.tar.gz
[2025-11-28 08:31:21] -rw-------. 1 boinc boinc 918218857 Nov 28 08:30 HITS.pool.root.1
[2025-11-28 08:31:21] -rw-------. 1 boinc boinc   5601280 Nov 28 08:31 result.tar.gz
08:31:22 (1681430): run_atlas exited; CPU time 214557.053127
08:31:22 (1681430): called boinc_finish(0)

</stderr_txt>
]]>

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