Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:31:38 (2295949): wrapper (7.7.26015): starting
15:31:38 (2295949): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 15:31:38] Arguments: --nthreads 8
[2025-11-26 15:31:38] Threads: 8
[2025-11-26 15:31:38] Checking for CVMFS
[2025-11-26 15:31:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 15:31:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 15:31:38] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 15:31:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 15:31:39] 2.13.3.0 12357 30486 249440 153334 1 621 23767479 32503808 68608 16776704 0 473705488 99.632 410114321 46775 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 15:31:39] CVMFS is ok
[2025-11-26 15:31:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 15:31:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 15:31:39] Further information can be found at the LHC@home message board.
[2025-11-26 15:31:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 15:31:39] Checking for apptainer binary...
[2025-11-26 15:31:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 15:31:39] Running /usr/bin/apptainer --version
[2025-11-26 15:31:39] apptainer version 1.4.4-1.el9
[2025-11-26 15:31:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 15:31:39] c8-7-2.aglt2.org
[2025-11-26 15:31:39] apptainer works
[2025-11-26 15:31:40] Set ATHENA_PROC_NUMBER=8
[2025-11-26 15:31:40] Set ATHENA_CORE_NUMBER=8
[2025-11-26 15:31:40] Starting ATLAS job with PandaID=6891571210
[2025-11-26 15:31:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 21:21:39]  *** The last 200 lines of the pilot log: ***
[2025-11-26 21:21:39] 2025-11-27 02:20:30,440 | INFO     | monitor loop #1206: job 0:6891571210 is in state 'finished'
[2025-11-26 21:21:39] 2025-11-27 02:20:30,440 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 21:21:39] 2025-11-27 02:20:32,829 | INFO     | PID=2302251 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 21:21:39] 2025-11-27 02:20:32,831 | INFO     | .. there are 105 such processes running
[2025-11-26 21:21:39] 2025-11-27 02:20:32,969 | INFO     | monitor loop #1207: job 0:6891571210 is in state 'finished'
[2025-11-26 21:21:39] 2025-11-27 02:20:32,969 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 21:21:39] 2025-11-27 02:20:33,832 | INFO     | time since job start (20884s) is within the limit (172800.0s)
[2025-11-26 21:21:39] 2025-11-27 02:20:35,476 | INFO     | monitor loop #1208: job 0:6891571210 is in state 'finished'
[2025-11-26 21:21:39] 2025-11-27 02:20:35,476 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 21:21:39] 2025-11-27 02:20:35,850 | INFO     | time since job start (20886s) is within the limit (172800.0s)
[2025-11-26 21:21:39] 2025-11-27 02:20:37,861 | INFO     | time since job start (20888s) is within the limit (172800.0s)
[2025-11-26 21:21:39] 2025-11-27 02:20:37,984 | INFO     | monitor loop #1209: job 0:6891571210 is in state 'finished'
[2025-11-26 21:21:39] 2025-11-27 02:20:37,984 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 21:21:39] 2025-11-27 02:20:39,873 | INFO     | time since job start (20890s) is within the limit (172800.0s)
[2025-11-26 21:21:39] 2025-11-27 02:20:40,501 | INFO     | monitor loop #1210: job 0:6891571210 is in state 'finished'
[2025-11-26 21:21:39] 2025-11-27 02:20:40,501 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 21:21:39] 2025-11-27 02:20:41,740 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 21:21:39] 2025-11-27 02:20:41,747 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3769.5180546875004
[2025-11-26 21:21:39] 2025-11-27 02:20:41,767 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6891571210/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 21:21:39] 2025-11-27 02:20:41,767 | INFO     | extracted standard info from prmon json
[2025-11-26 21:21:39] 2025-11-27 02:20:41,767 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 21:21:39] 2025-11-27 02:20:41,767 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 21:21:39] 2025-11-27 02:20:41,774 | INFO     | fitting pss+swap vs Time
[2025-11-26 21:21:39] 2025-11-27 02:20:41,774 | INFO     | sum of square deviations: 12295393650.973614
[2025-11-26 21:21:39] 2025-11-27 02:20:41,776 | INFO     | sum of deviations: -108864572637.12923
[2025-11-26 21:21:39] 2025-11-27 02:20:41,776 | INFO     | mean x: 1764199616.281525
[2025-11-26 21:21:39] 2025-11-27 02:20:41,776 | INFO     | mean y: 2740239.709677419
[2025-11-26 21:21:39] 2025-11-27 02:20:41,776 | INFO     | intersect: 15623129690.019579
[2025-11-26 21:21:39] 2025-11-27 02:20:41,777 | INFO     | chi2: 17.37831574120237
[2025-11-26 21:21:39] 2025-11-27 02:20:41,777 | INFO     | sum of square deviations: 11762464100.571405
[2025-11-26 21:21:39] 2025-11-27 02:20:41,778 | INFO     | sum of deviations: 7145936193.000217
[2025-11-26 21:21:39] 2025-11-27 02:20:41,778 | INFO     | mean x: 1764199463.7857144
[2025-11-26 21:21:39] 2025-11-27 02:20:41,779 | INFO     | mean y: 2773437.5833333335
[2025-11-26 21:21:39] 2025-11-27 02:20:41,779 | INFO     | intersect: -1069013620.9910251
[2025-11-26 21:21:39] 2025-11-27 02:20:41,779 | INFO     | chi2: 13.187307858675705
[2025-11-26 21:21:39] 2025-11-27 02:20:41,779 | INFO     | current chi2=13.187307858675705 (change=24.116306464556722 %)
[2025-11-26 21:21:39] 2025-11-27 02:20:41,779 | INFO     | right removable region: 335
[2025-11-26 21:21:39] 2025-11-27 02:20:41,779 | INFO     | sum of square deviations: 11762405540.571402
[2025-11-26 21:21:39] 2025-11-27 02:20:41,781 | INFO     | sum of deviations: -220219209758.92856
[2025-11-26 21:21:39] 2025-11-27 02:20:41,781 | INFO     | mean x: 1764199768.7857144
[2025-11-26 21:21:39] 2025-11-27 02:20:41,781 | INFO     | mean y: 2772043.556547619
[2025-11-26 21:21:39] 2025-11-27 02:20:41,781 | INFO     | intersect: 33032638051.730347
[2025-11-26 21:21:39] 2025-11-27 02:20:41,781 | INFO     | chi2: 14.42592859443944
[2025-11-26 21:21:39] 2025-11-27 02:20:41,781 | INFO     | current chi2=14.42592859443944 (change=16.988914177471727 %)
[2025-11-26 21:21:39] 2025-11-27 02:20:41,781 | INFO     | left removable region: 10
[2025-11-26 21:21:39] 2025-11-27 02:20:41,781 | INFO     | sum of square deviations: 10644625922.812296
[2025-11-26 21:21:39] 2025-11-27 02:20:41,783 | INFO     | sum of deviations: -96980826453.57234
[2025-11-26 21:21:39] 2025-11-27 02:20:41,783 | INFO     | mean x: 1764199738.2892308
[2025-11-26 21:21:39] 2025-11-27 02:20:41,783 | INFO     | mean y: 2819850.7507692305
[2025-11-26 21:21:39] 2025-11-27 02:20:41,783 | INFO     | intersect: 16076052474.341448
[2025-11-26 21:21:39] 2025-11-27 02:20:41,783 | INFO     | chi2: 9.06499199126101
[2025-11-26 21:21:39] 2025-11-27 02:20:41,783 | INFO     | current memory leak: -9.11 B/s (using 325 data points, chi2=9.06)
[2025-11-26 21:21:39] 2025-11-27 02:20:41,784 | INFO     | could have reported an average CPU frequency of 3793 MHz (15 samples)
[2025-11-26 21:21:39] 2025-11-27 02:20:41,784 | INFO     | ..............................
[2025-11-26 21:21:39] 2025-11-27 02:20:41,784 | INFO     | . Timing measurements:
[2025-11-26 21:21:39] 2025-11-27 02:20:41,784 | INFO     | . get job = 0 s
[2025-11-26 21:21:39] 2025-11-27 02:20:41,784 | INFO     | . initial setup = 3 s
[2025-11-26 21:21:39] 2025-11-27 02:20:41,784 | INFO     | . payload setup = 22 s
[2025-11-26 21:21:39] 2025-11-27 02:20:41,784 | INFO     | . stage-in = 0 s
[2025-11-26 21:21:39] 2025-11-27 02:20:41,784 | INFO     | . payload execution = 20773 s
[2025-11-26 21:21:39] 2025-11-27 02:20:41,784 | INFO     | . stage-out = 4 s
[2025-11-26 21:21:39] 2025-11-27 02:20:41,784 | INFO     | . log creation = 1 s
[2025-11-26 21:21:39] 2025-11-27 02:20:41,784 | INFO     | ..............................
[2025-11-26 21:21:39] 2025-11-27 02:20:41,880 | INFO     | time since job start (20892s) is within the limit (172800.0s)
[2025-11-26 21:21:39] 2025-11-27 02:20:42,093 | INFO     | 
[2025-11-26 21:21:39] 2025-11-27 02:20:42,093 | INFO     | job summary report
[2025-11-26 21:21:39] 2025-11-27 02:20:42,093 | INFO     | --------------------------------------------------
[2025-11-26 21:21:39] 2025-11-27 02:20:42,093 | INFO     | PanDA job id: 6891571210
[2025-11-26 21:21:39] 2025-11-27 02:20:42,093 | INFO     | task id: 47493068
[2025-11-26 21:21:39] 2025-11-27 02:20:42,093 | INFO     | errors: (none)
[2025-11-26 21:21:39] 2025-11-27 02:20:42,093 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 21:21:39] 2025-11-27 02:20:42,093 | INFO     | pilot state: finished 
[2025-11-26 21:21:39] 2025-11-27 02:20:42,093 | INFO     | transexitcode: 0
[2025-11-26 21:21:39] 2025-11-27 02:20:42,093 | INFO     | exeerrorcode: 0
[2025-11-26 21:21:39] 2025-11-27 02:20:42,093 | INFO     | exeerrordiag: 
[2025-11-26 21:21:39] 2025-11-27 02:20:42,093 | INFO     | exitcode: 0
[2025-11-26 21:21:39] 2025-11-27 02:20:42,093 | INFO     | exitmsg: OK
[2025-11-26 21:21:39] 2025-11-27 02:20:42,093 | INFO     | cpuconsumptiontime: 130905 s
[2025-11-26 21:21:39] 2025-11-27 02:20:42,093 | INFO     | nevents: 1000
[2025-11-26 21:21:39] 2025-11-27 02:20:42,093 | INFO     | neventsw: 0
[2025-11-26 21:21:39] 2025-11-27 02:20:42,094 | INFO     | pid: 2334099
[2025-11-26 21:21:39] 2025-11-27 02:20:42,094 | INFO     | pgrp: 2334099
[2025-11-26 21:21:39] 2025-11-27 02:20:42,094 | INFO     | corecount: 8
[2025-11-26 21:21:39] 2025-11-27 02:20:42,094 | INFO     | event service: False
[2025-11-26 21:21:39] 2025-11-27 02:20:42,094 | INFO     | sizes: {0: 2284304, 11: 2284304, 22: 2284594, 33: 2284622, 20800: 2318968, 20805: 2327962, 20806: 2328146, 20841: 2328392}
[2025-11-26 21:21:39] 2025-11-27 02:20:42,094 | INFO     | --------------------------------------------------
[2025-11-26 21:21:39] 2025-11-27 02:20:42,094 | INFO     | 
[2025-11-26 21:21:39] 2025-11-27 02:20:42,094 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-26 21:21:39] 2025-11-27 02:20:42,237 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 21:21:39] 2025-11-27 02:20:42,237 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 21:21:39] 2025-11-27 02:20:42,237 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 21:21:39] 2025-11-27 02:20:42,237 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 21:21:39] 2025-11-27 02:20:42,237 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 21:21:39] 2025-11-27 02:20:42,237 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 21:21:39] 2025-11-27 02:20:42,237 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 21:21:39] 2025-11-27 02:20:42,237 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 21:21:39] 2025-11-27 02:20:42,237 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 21:21:39] 2025-11-27 02:20:42,237 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 21:21:39] 2025-11-27 02:20:42,237 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 21:21:39] 2025-11-27 02:20:42,237 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 21:21:39] 2025-11-27 02:20:42,237 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 21:21:39] 2025-11-27 02:20:42,237 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 21:21:39] 2025-11-27 02:20:42,237 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 21:21:39] 2025-11-27 02:20:42,237 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 21:21:39] 2025-11-27 02:20:42,237 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 21:21:39] 2025-11-27 02:20:42,237 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 21:21:39] 2025-11-27 02:20:42,238 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 21:21:39] 2025-11-27 02:20:42,238 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 21:21:39] 2025-11-27 02:20:42,238 | INFO     | job 6891571210 has completed (purged errors)
[2025-11-26 21:21:39] 2025-11-27 02:20:42,238 | INFO     | overall cleanup function is called
[2025-11-26 21:21:39] 2025-11-27 02:20:43,282 | INFO     | --- collectZombieJob: --- 10, [2334099]
[2025-11-26 21:21:39] 2025-11-27 02:20:43,282 | INFO     | zombie collector waiting for pid 2334099
[2025-11-26 21:21:39] 2025-11-27 02:20:43,282 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 21:21:39] 2025-11-27 02:20:43,282 | INFO     | collected zombie processes
[2025-11-26 21:21:39] 2025-11-27 02:20:43,282 | INFO     | will attempt to kill all subprocesses of pid=2334099
[2025-11-26 21:21:39] 2025-11-27 02:20:44,712 | INFO     | process IDs to be killed: [2334099] (in reverse order)
[2025-11-26 21:21:39] 2025-11-27 02:20:45,019 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 21:21:39] 2025-11-27 02:20:45,020 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 21:21:39] 2025-11-27 02:20:45,148 | INFO     | did not find any defunct processes belonging to 2334099
[2025-11-26 21:21:39] 2025-11-27 02:20:45,221 | INFO     | did not find any defunct processes belonging to 2334099
[2025-11-26 21:21:39] 2025-11-27 02:20:45,229 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 21:21:39] 2025-11-27 02:20:45,229 | INFO     | ready for new job
[2025-11-26 21:21:39] 2025-11-27 02:20:45,229 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 21:21:39] 2025-11-27 02:20:45,231 | INFO     | ***************************************
[2025-11-26 21:21:39] 2025-11-27 02:20:45,231 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 21:21:39] 2025-11-27 02:20:45,231 | INFO     | ***************************************
[2025-11-26 21:21:39] 2025-11-27 02:20:45,231 | INFO     | 
[2025-11-26 21:21:39] 2025-11-27 02:20:45,237 | INFO     | architecture information:
[2025-11-26 21:21:39] 2025-11-27 02:20:45,237 | INFO     | executing command: cat /etc/os-release
[2025-11-26 21:21:39] 2025-11-27 02:20:45,274 | INFO     | cat /etc/os-release:
[2025-11-26 21:21:39] NAME="CentOS Linux"
[2025-11-26 21:21:39] VERSION="7 (Core)"
[2025-11-26 21:21:39] ID="centos"
[2025-11-26 21:21:39] ID_LIKE="rhel fedora"
[2025-11-26 21:21:39] VERSION_ID="7"
[2025-11-26 21:21:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 21:21:39] ANSI_COLOR="0;31"
[2025-11-26 21:21:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 21:21:39] HOME_URL="https://www.centos.org/"
[2025-11-26 21:21:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 21:21:39] 
[2025-11-26 21:21:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 21:21:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 21:21:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 21:21:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 21:21:39] 
[2025-11-26 21:21:39] 2025-11-27 02:20:45,274 | INFO     | ***************************************
[2025-11-26 21:21:39] 2025-11-27 02:20:45,777 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-26 21:21:39] 2025-11-27 02:20:45,857 | INFO     | sufficient remaining disk space (79823896576 B)
[2025-11-26 21:21:39] 2025-11-27 02:20:45,857 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 21:21:39] 2025-11-27 02:20:45,858 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 21:21:39] 2025-11-27 02:20:45,858 | INFO     | update_server=False
[2025-11-26 21:21:39] 2025-11-27 02:20:45,858 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 21:21:39] 2025-11-27 02:20:45,860 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 21:21:39] 2025-11-27 02:20:46,270 | INFO     | all payload control threads have been joined
[2025-11-26 21:21:39] 2025-11-27 02:20:46,333 | INFO     | all data control threads have been joined
[2025-11-26 21:21:39] 2025-11-27 02:20:46,449 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 21:21:39] 2025-11-27 02:20:46,539 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 21:21:39] 2025-11-27 02:20:46,539 | INFO     | aborting loop
[2025-11-26 21:21:39] 2025-11-27 02:20:46,852 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 21:21:39] 2025-11-27 02:20:46,862 | INFO     | [job] retrieve thread has finished
[2025-11-26 21:21:39] 2025-11-27 02:20:46,958 | INFO     | [payload] failed_post thread has finished
[2025-11-26 21:21:39] 2025-11-27 02:20:46,958 | INFO     | all job control threads have been joined
[2025-11-26 21:21:39] 2025-11-27 02:20:46,994 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 21:21:39] 2025-11-27 02:20:47,023 | INFO     | [payload] validate_post thread has finished
[2025-11-26 21:21:39] 2025-11-27 02:20:47,118 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 21:21:39] 2025-11-27 02:20:47,229 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 21:21:39] 2025-11-27 02:20:47,276 | INFO     | [payload] control thread has finished
[2025-11-26 21:21:39] 2025-11-27 02:20:47,339 | INFO     | [data] control thread has finished
[2025-11-26 21:21:39] 2025-11-27 02:20:47,525 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 21:21:39] 2025-11-27 02:20:47,547 | INFO     | [job] job monitor thread has finished
[2025-11-26 21:21:39] 2025-11-27 02:20:47,828 | INFO     | [data] copytool_in thread has finished
[2025-11-26 21:21:39] 2025-11-27 02:20:47,858 | INFO     | [job] queue monitor thread has finished
[2025-11-26 21:21:39] 2025-11-27 02:20:47,966 | INFO     | [job] control thread has finished
[2025-11-26 21:21:39] 2025-11-27 02:20:48,006 | INFO     | [job] validate thread has finished
[2025-11-26 21:21:39] 2025-11-27 02:20:48,459 | INFO     | [data] copytool_out thread has finished
[2025-11-26 21:21:39] 2025-11-27 02:20:49,869 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 21:21:39] 2025-11-27 02:21:06,812 | INFO     | [monitor] cgroup control has ended
[2025-11-26 21:21:39] 2025-11-27 02:21:07,272 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140301183756096)>', '<ExcThread(monitor, started 140300324427520)>']
[2025-11-26 21:21:39] 2025-11-27 02:21:12,298 | INFO     | all workflow threads have been joined
[2025-11-26 21:21:39] 2025-11-27 02:21:12,298 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 21:21:39] 2025-11-27 02:21:12,298 | INFO     | traces error code: 0
[2025-11-26 21:21:39] 2025-11-27 02:21:12,298 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 21:21:39] 2025-11-27 02:21:17,332 | INFO     | PID=2302251 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 21:21:39] 2025-11-27 02:21:17,332 | INFO     | .. there are 105 such processes running
[2025-11-26 21:21:39] 2025-11-27 02:21:17,333 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 21:21:39] 2025-11-27 02:21:17,333 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 21:21:39] 2025-11-27 02:21:17,333 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 21:21:39] 2025-11-27 02:21:17,333 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 21:21:39] 2025-11-27 02:21:17,333 | INFO     | [monitor] control thread has ended
[2025-11-26 21:21:39] 2025-11-27 02:21:17,708 [wrapper] ==== pilot stdout END ====
[2025-11-26 21:21:39] 2025-11-27 02:21:17,747 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 21:21:39] 2025-11-27 02:21:17,764 [wrapper] pilotpid: 2302251
[2025-11-26 21:21:39] 2025-11-27 02:21:18,045 [wrapper] Pilot exit status: 0
[2025-11-26 21:21:39] 2025-11-27 02:21:18,290 [wrapper] pandaids: 6891571210
[2025-11-26 21:21:39] 2025-11-27 02:21:18,573 [wrapper] cleanup supervisor_pilot 2620356 2302252
[2025-11-26 21:21:39] 2025-11-27 02:21:18,621 [wrapper] Test setup, not cleaning
[2025-11-26 21:21:39] 2025-11-27 02:21:18,756 [wrapper] apfmon messages muted
[2025-11-26 21:21:39] 2025-11-27 02:21:18,845 [wrapper] ==== wrapper stdout END ====
[2025-11-26 21:21:39] 2025-11-27 02:21:18,872 [wrapper] ==== wrapper stderr END ====
[2025-11-26 21:21:39]  *** Error codes and diagnostics ***
[2025-11-26 21:21:39]     "exeErrorCode": 0,
[2025-11-26 21:21:39]     "exeErrorDiag": "",
[2025-11-26 21:21:39]     "pilotErrorCode": 0,
[2025-11-26 21:21:39]     "pilotErrorDiag": "",
[2025-11-26 21:21:39]  *** Listing of results directory ***
[2025-11-26 21:21:39] total 1308780
[2025-11-26 21:21:39] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 10:45 queuedata.json
[2025-11-26 21:21:39] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 10:47 pilot3.tar.gz
[2025-11-26 21:21:39] -rwx------. 1 boincer umatlas     36292 Nov 18 10:48 runpilot2-wrapper.sh
[2025-11-26 21:21:39] -rw-r--r--. 1 boincer umatlas       100 Nov 26 15:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 21:21:39] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 15:31 run_atlas
[2025-11-26 21:21:39] -rw-r--r--. 1 boincer umatlas       105 Nov 26 15:31 job.xml
[2025-11-26 21:21:39] -rw-r--r--. 2 boincer umatlas 410353664 Nov 26 15:31 EVNT.47493065._000274.pool.root.1
[2025-11-26 21:21:39] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 15:31 start_atlas.sh
[2025-11-26 21:21:39] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 15:31 shared
[2025-11-26 21:21:39] -rw-r--r--. 2 boincer umatlas    590101 Nov 26 15:31 input.tar.gz
[2025-11-26 21:21:39] -rw-r--r--. 1 boincer umatlas         0 Nov 26 15:31 boinc_lockfile
[2025-11-26 21:21:39] -rw-r--r--. 1 boincer umatlas      2773 Nov 26 15:31 pandaJob.out
[2025-11-26 21:21:39] -rw-------. 1 boincer umatlas    991538 Nov 26 15:32 agis_schedconf.cvmfs.json
[2025-11-26 21:21:39] drwx------. 5 boincer umatlas      4096 Nov 26 15:32 pilot3
[2025-11-26 21:21:39] -rw-r--r--. 1 boincer umatlas       533 Nov 26 21:01 boinc_task_state.xml
[2025-11-26 21:21:39] -rw-r--r--. 1 boincer umatlas      7170 Nov 26 21:09 init_data.xml
[2025-11-26 21:21:39] -rw-------. 1 boincer umatlas 917388407 Nov 26 21:19 HITS.47493068._002735.pool.root.1
[2025-11-26 21:21:39] -rw-------. 1 boincer umatlas      1052 Nov 26 21:19 memory_monitor_summary.json
[2025-11-26 21:21:39] -rw-------. 1 boincer umatlas   1516240 Nov 26 21:20 agis_ddmendpoints.agis.ALL.json
[2025-11-26 21:21:39] -rw-------. 1 boincer umatlas   1633236 Nov 26 21:20 log.47493068._002735.job.log.tgz.1
[2025-11-26 21:21:39] -rw-------. 1 boincer umatlas      8578 Nov 26 21:20 heartbeat.json
[2025-11-26 21:21:39] -rw-------. 1 boincer umatlas        95 Nov 26 21:21 pilot_heartbeat.json
[2025-11-26 21:21:39] -rw-------. 1 boincer umatlas       824 Nov 26 21:21 pilotlog.txt
[2025-11-26 21:21:39] -rw-------. 1 boincer umatlas   2634835 Nov 26 21:21 log.47493068._002735.job.log.1
[2025-11-26 21:21:39] -rw-------. 1 boincer umatlas       353 Nov 26 21:21 output.list
[2025-11-26 21:21:39] -rw-r--r--. 1 boincer umatlas       620 Nov 26 21:21 runtime_log
[2025-11-26 21:21:39] -rw-------. 1 boincer umatlas   4290560 Nov 26 21:21 result.tar.gz
[2025-11-26 21:21:39] -rw-r--r--. 1 boincer umatlas      8694 Nov 26 21:21 runtime_log.err
[2025-11-26 21:21:39] -rw-------. 1 boincer umatlas       659 Nov 26 21:21 c0YLDmh7cf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmLPFKDmNRJxom.diag
[2025-11-26 21:21:39] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 21:21 boinc_mmap_file
[2025-11-26 21:21:39] -rw-r--r--. 1 boincer umatlas        29 Nov 26 21:21 wrapper_checkpoint.txt
[2025-11-26 21:21:39] -rw-r--r--. 1 boincer umatlas     21860 Nov 26 21:21 stderr.txt
[2025-11-26 21:21:39] HITS file was successfully produced:
[2025-11-26 21:21:39] -rw-------. 1 boincer umatlas 917388407 Nov 26 21:19 shared/HITS.pool.root.1
[2025-11-26 21:21:39]  *** Contents of shared directory: ***
[2025-11-26 21:21:39] total 1301416
[2025-11-26 21:21:39] -rw-r--r--. 2 boincer umatlas 410353664 Nov 26 15:31 ATLAS.root_0
[2025-11-26 21:21:39] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 15:31 start_atlas.sh
[2025-11-26 21:21:39] -rw-r--r--. 2 boincer umatlas    590101 Nov 26 15:31 input.tar.gz
[2025-11-26 21:21:39] -rw-------. 1 boincer umatlas 917388407 Nov 26 21:19 HITS.pool.root.1
[2025-11-26 21:21:39] -rw-------. 1 boincer umatlas   4290560 Nov 26 21:21 result.tar.gz
21:21:41 (2295949): run_atlas exited; CPU time 131398.714141
21:21:41 (2295949): called boinc_finish(0)

</stderr_txt>
]]>

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