Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:45:54 (15231): wrapper (7.7.26015): starting
14:45:54 (15231): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 14:45:54] Arguments: --nthreads 8
[2025-11-26 14:45:54] Threads: 8
[2025-11-26 14:45:54] Checking for CVMFS
[2025-11-26 14:45:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 14:45:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 14:45:55] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 14:45:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 14:45:55] 2.11.2.0 2840 68072 79080 153333 2 82 19678451 20275201 1 130560 0 17870288 99.822 4543515 26831 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 14:45:55] CVMFS is ok
[2025-11-26 14:45:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 14:45:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 14:45:55] Further information can be found at the LHC@home message board.
[2025-11-26 14:45:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 14:45:55] Checking for apptainer binary...
[2025-11-26 14:45:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 14:45:55] Running /usr/bin/apptainer --version
[2025-11-26 14:45:55] apptainer version 1.3.2-1.el7
[2025-11-26 14:45:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 14:45:57] c-204-39.aglt2.org
[2025-11-26 14:45:57] apptainer works
[2025-11-26 14:45:57] Set ATHENA_PROC_NUMBER=8
[2025-11-26 14:45:57] Set ATHENA_CORE_NUMBER=8
[2025-11-26 14:45:57] Starting ATLAS job with PandaID=6897865007
[2025-11-26 14:45:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 03:15:35]  *** The last 200 lines of the pilot log: ***
[2025-11-27 03:15:35] 2025-11-27 08:14:40,902 | INFO     | time since job start (44906s) is within the limit (172800.0s)
[2025-11-27 03:15:35] 2025-11-27 08:14:42,908 | INFO     | time since job start (44908s) is within the limit (172800.0s)
[2025-11-27 03:15:35] 2025-11-27 08:14:43,128 | INFO     | monitor loop #3308: job 0:6897865007 is in state 'finished'
[2025-11-27 03:15:35] 2025-11-27 08:14:43,128 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 03:15:35] 2025-11-27 08:14:44,607 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 03:15:35] 2025-11-27 08:14:44,610 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-11-27 03:15:35] 2025-11-27 08:14:44,612 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6897865007/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 03:15:35] 2025-11-27 08:14:44,613 | INFO     | extracted standard info from prmon json
[2025-11-27 03:15:35] 2025-11-27 08:14:44,614 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 03:15:35] 2025-11-27 08:14:44,614 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 03:15:35] 2025-11-27 08:14:44,628 | INFO     | fitting pss+swap vs Time
[2025-11-27 03:15:35] 2025-11-27 08:14:44,629 | INFO     | sum of square deviations: 123626930209.34236
[2025-11-27 03:15:35] 2025-11-27 08:14:44,640 | INFO     | sum of deviations: 769372431469.6034
[2025-11-27 03:15:35] 2025-11-27 08:14:44,640 | INFO     | mean x: 1764208824.0298913
[2025-11-27 03:15:35] 2025-11-27 08:14:44,640 | INFO     | mean y: 2896357.1997282607
[2025-11-27 03:15:35] 2025-11-27 08:14:44,640 | INFO     | intersect: -10976375151.569279
[2025-11-27 03:15:35] 2025-11-27 08:14:44,641 | INFO     | chi2: 5.9183749163207215
[2025-11-27 03:15:35] 2025-11-27 08:14:44,642 | INFO     | sum of square deviations: 121124565027.92891
[2025-11-27 03:15:35] 2025-11-27 08:14:44,653 | INFO     | sum of deviations: 1000844892409.5348
[2025-11-27 03:15:35] 2025-11-27 08:14:44,653 | INFO     | mean x: 1764208671.5335157
[2025-11-27 03:15:35] 2025-11-27 08:14:44,653 | INFO     | mean y: 2910451.998632011
[2025-11-27 03:15:35] 2025-11-27 08:14:44,653 | INFO     | intersect: -14574638186.807995
[2025-11-27 03:15:35] 2025-11-27 08:14:44,654 | INFO     | chi2: 3.076269889838107
[2025-11-27 03:15:35] 2025-11-27 08:14:44,654 | INFO     | current chi2=3.076269889838107 (change=48.02171316732781 %)
[2025-11-27 03:15:35] 2025-11-27 08:14:44,655 | INFO     | sum of square deviations: 118656200483.99582
[2025-11-27 03:15:35] 2025-11-27 08:14:44,666 | INFO     | sum of deviations: 1096297437323.3884
[2025-11-27 03:15:35] 2025-11-27 08:14:44,666 | INFO     | mean x: 1764208519.0371902
[2025-11-27 03:15:35] 2025-11-27 08:14:44,666 | INFO     | mean y: 2916342.8374655647
[2025-11-27 03:15:35] 2025-11-27 08:14:44,666 | INFO     | intersect: -16297093858.36083
[2025-11-27 03:15:35] 2025-11-27 08:14:44,667 | INFO     | chi2: 2.477792499976801
[2025-11-27 03:15:35] 2025-11-27 08:14:44,667 | INFO     | current chi2=2.477792499976801 (change=19.45464511544538 %)
[2025-11-27 03:15:35] 2025-11-27 08:14:44,667 | INFO     | right removable region: 725
[2025-11-27 03:15:35] 2025-11-27 08:14:44,668 | INFO     | sum of square deviations: 121124327127.929
[2025-11-27 03:15:35] 2025-11-27 08:14:44,679 | INFO     | sum of deviations: 566857909382.064
[2025-11-27 03:15:35] 2025-11-27 08:14:44,680 | INFO     | mean x: 1764208976.5335157
[2025-11-27 03:15:35] 2025-11-27 08:14:44,680 | INFO     | mean y: 2908676.017783858
[2025-11-27 03:15:35] 2025-11-27 08:14:44,680 | INFO     | intersect: -8253531924.016437
[2025-11-27 03:15:35] 2025-11-27 08:14:44,681 | INFO     | chi2: 3.620852853251423
[2025-11-27 03:15:35] 2025-11-27 08:14:44,681 | INFO     | current chi2=3.620852853251423 (change=38.82015072640244 %)
[2025-11-27 03:15:35] 2025-11-27 08:14:44,682 | INFO     | sum of square deviations: 118655813866.13773
[2025-11-27 03:15:35] 2025-11-27 08:14:44,692 | INFO     | sum of deviations: 525997799237.3473
[2025-11-27 03:15:35] 2025-11-27 08:14:44,693 | INFO     | mean x: 1764209129.0344353
[2025-11-27 03:15:35] 2025-11-27 08:14:44,693 | INFO     | mean y: 2911199.0661157025
[2025-11-27 03:15:35] 2025-11-27 08:14:44,693 | INFO     | intersect: -7817776966.399129
[2025-11-27 03:15:35] 2025-11-27 08:14:44,694 | INFO     | chi2: 3.583305277360913
[2025-11-27 03:15:35] 2025-11-27 08:14:44,694 | INFO     | current chi2=3.583305277360913 (change=1.0369815458475007 %)
[2025-11-27 03:15:35] 2025-11-27 08:14:44,694 | INFO     | left removable region: 20
[2025-11-27 03:15:35] 2025-11-27 08:14:44,695 | INFO     | sum of square deviations: 108654462388.93092
[2025-11-27 03:15:35] 2025-11-27 08:14:44,705 | INFO     | sum of deviations: 808289188212.3982
[2025-11-27 03:15:35] 2025-11-27 08:14:44,705 | INFO     | mean x: 1764209098.5432625
[2025-11-27 03:15:35] 2025-11-27 08:14:44,705 | INFO     | mean y: 2935205.904964539
[2025-11-27 03:15:35] 2025-11-27 08:14:44,705 | INFO     | intersect: -13121156605.382963
[2025-11-27 03:15:35] 2025-11-27 08:14:44,706 | INFO     | chi2: 0.0937087334889718
[2025-11-27 03:15:35] 2025-11-27 08:14:44,706 | INFO     | current memory leak: 7.44 B/s (using 705 data points, chi2=0.09)
[2025-11-27 03:15:35] 2025-11-27 08:14:44,707 | INFO     | could have reported an average CPU frequency of 2138 MHz (28 samples)
[2025-11-27 03:15:35] 2025-11-27 08:14:44,707 | INFO     | ..............................
[2025-11-27 03:15:35] 2025-11-27 08:14:44,707 | INFO     | . Timing measurements:
[2025-11-27 03:15:35] 2025-11-27 08:14:44,707 | INFO     | . get job = 0 s
[2025-11-27 03:15:35] 2025-11-27 08:14:44,707 | INFO     | . initial setup = 2 s
[2025-11-27 03:15:35] 2025-11-27 08:14:44,707 | INFO     | . payload setup = 8 s
[2025-11-27 03:15:35] 2025-11-27 08:14:44,707 | INFO     | . stage-in = 0 s
[2025-11-27 03:15:35] 2025-11-27 08:14:44,707 | INFO     | . payload execution = 44869 s
[2025-11-27 03:15:35] 2025-11-27 08:14:44,708 | INFO     | . stage-out = 4 s
[2025-11-27 03:15:35] 2025-11-27 08:14:44,708 | INFO     | . log creation = 0 s
[2025-11-27 03:15:35] 2025-11-27 08:14:44,708 | INFO     | ..............................
[2025-11-27 03:15:35] 2025-11-27 08:14:44,797 | INFO     | 
[2025-11-27 03:15:35] 2025-11-27 08:14:44,797 | INFO     | job summary report
[2025-11-27 03:15:35] 2025-11-27 08:14:44,798 | INFO     | --------------------------------------------------
[2025-11-27 03:15:35] 2025-11-27 08:14:44,798 | INFO     | PanDA job id: 6897865007
[2025-11-27 03:15:35] 2025-11-27 08:14:44,798 | INFO     | task id: 47556161
[2025-11-27 03:15:35] 2025-11-27 08:14:44,798 | INFO     | errors: (none)
[2025-11-27 03:15:35] 2025-11-27 08:14:44,798 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 03:15:35] 2025-11-27 08:14:44,798 | INFO     | pilot state: finished 
[2025-11-27 03:15:35] 2025-11-27 08:14:44,799 | INFO     | transexitcode: 0
[2025-11-27 03:15:35] 2025-11-27 08:14:44,799 | INFO     | exeerrorcode: 0
[2025-11-27 03:15:35] 2025-11-27 08:14:44,799 | INFO     | exeerrordiag: 
[2025-11-27 03:15:35] 2025-11-27 08:14:44,799 | INFO     | exitcode: 0
[2025-11-27 03:15:35] 2025-11-27 08:14:44,799 | INFO     | exitmsg: OK
[2025-11-27 03:15:35] 2025-11-27 08:14:44,799 | INFO     | cpuconsumptiontime: 347208 s
[2025-11-27 03:15:35] 2025-11-27 08:14:44,800 | INFO     | nevents: 1000
[2025-11-27 03:15:35] 2025-11-27 08:14:44,800 | INFO     | neventsw: 0
[2025-11-27 03:15:35] 2025-11-27 08:14:44,800 | INFO     | pid: 26344
[2025-11-27 03:15:35] 2025-11-27 08:14:44,800 | INFO     | pgrp: 26344
[2025-11-27 03:15:35] 2025-11-27 08:14:44,800 | INFO     | corecount: 8
[2025-11-27 03:15:35] 2025-11-27 08:14:44,800 | INFO     | event service: False
[2025-11-27 03:15:35] 2025-11-27 08:14:44,801 | INFO     | sizes: {0: 2284151, 1: 2284293, 6: 2284555, 11: 2284583, 44882: 2330537, 44886: 2339715, 44893: 2339905}
[2025-11-27 03:15:35] 2025-11-27 08:14:44,801 | INFO     | --------------------------------------------------
[2025-11-27 03:15:35] 2025-11-27 08:14:44,801 | INFO     | 
[2025-11-27 03:15:35] 2025-11-27 08:14:44,801 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 03:15:35] 2025-11-27 08:14:44,832 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 03:15:35] 2025-11-27 08:14:44,833 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 03:15:35] 2025-11-27 08:14:44,833 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 03:15:35] 2025-11-27 08:14:44,833 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 03:15:35] 2025-11-27 08:14:44,833 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 03:15:35] 2025-11-27 08:14:44,834 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 03:15:35] 2025-11-27 08:14:44,834 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 03:15:35] 2025-11-27 08:14:44,834 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 03:15:35] 2025-11-27 08:14:44,834 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 03:15:35] 2025-11-27 08:14:44,834 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 03:15:35] 2025-11-27 08:14:44,834 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 03:15:35] 2025-11-27 08:14:44,835 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 03:15:35] 2025-11-27 08:14:44,835 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 03:15:35] 2025-11-27 08:14:44,835 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 03:15:35] 2025-11-27 08:14:44,835 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 03:15:35] 2025-11-27 08:14:44,835 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 03:15:35] 2025-11-27 08:14:44,836 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 03:15:35] 2025-11-27 08:14:44,836 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 03:15:35] 2025-11-27 08:14:44,836 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 03:15:35] 2025-11-27 08:14:44,836 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 03:15:35] 2025-11-27 08:14:44,836 | INFO     | job 6897865007 has completed (purged errors)
[2025-11-27 03:15:35] 2025-11-27 08:14:44,837 | INFO     | overall cleanup function is called
[2025-11-27 03:15:35] 2025-11-27 08:14:45,851 | INFO     | --- collectZombieJob: --- 10, [26344]
[2025-11-27 03:15:35] 2025-11-27 08:14:45,851 | INFO     | zombie collector waiting for pid 26344
[2025-11-27 03:15:35] 2025-11-27 08:14:45,852 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 03:15:35] 2025-11-27 08:14:45,852 | INFO     | collected zombie processes
[2025-11-27 03:15:35] 2025-11-27 08:14:45,852 | INFO     | will attempt to kill all subprocesses of pid=26344
[2025-11-27 03:15:35] 2025-11-27 08:14:45,944 | INFO     | process IDs to be killed: [26344] (in reverse order)
[2025-11-27 03:15:35] 2025-11-27 08:14:46,001 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 03:15:35] 2025-11-27 08:14:46,001 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 03:15:35] 2025-11-27 08:14:46,006 | INFO     | did not find any defunct processes belonging to 26344
[2025-11-27 03:15:35] 2025-11-27 08:14:46,008 | INFO     | did not find any defunct processes belonging to 26344
[2025-11-27 03:15:35] 2025-11-27 08:14:46,011 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 03:15:35] 2025-11-27 08:14:46,011 | INFO     | ready for new job
[2025-11-27 03:15:35] 2025-11-27 08:14:46,011 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 03:15:35] 2025-11-27 08:14:46,015 | INFO     | ***************************************
[2025-11-27 03:15:35] 2025-11-27 08:14:46,015 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 03:15:35] 2025-11-27 08:14:46,015 | INFO     | ***************************************
[2025-11-27 03:15:35] 2025-11-27 08:14:46,015 | INFO     | 
[2025-11-27 03:15:35] 2025-11-27 08:14:46,015 | INFO     | architecture information:
[2025-11-27 03:15:35] 2025-11-27 08:14:46,016 | INFO     | executing command: cat /etc/os-release
[2025-11-27 03:15:35] 2025-11-27 08:14:46,034 | INFO     | cat /etc/os-release:
[2025-11-27 03:15:35] NAME="CentOS Linux"
[2025-11-27 03:15:35] VERSION="7 (Core)"
[2025-11-27 03:15:35] ID="centos"
[2025-11-27 03:15:35] ID_LIKE="rhel fedora"
[2025-11-27 03:15:35] VERSION_ID="7"
[2025-11-27 03:15:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 03:15:35] ANSI_COLOR="0;31"
[2025-11-27 03:15:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 03:15:35] HOME_URL="https://www.centos.org/"
[2025-11-27 03:15:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 03:15:35] 
[2025-11-27 03:15:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 03:15:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 03:15:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 03:15:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 03:15:35] 
[2025-11-27 03:15:35] 2025-11-27 08:14:46,035 | INFO     | ***************************************
[2025-11-27 03:15:35] 2025-11-27 08:14:46,538 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 03:15:35] 2025-11-27 08:14:46,649 | INFO     | sufficient remaining disk space (17453547520 B)
[2025-11-27 03:15:35] 2025-11-27 08:14:46,650 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 03:15:35] 2025-11-27 08:14:46,650 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 03:15:35] 2025-11-27 08:14:46,650 | INFO     | update_server=False
[2025-11-27 03:15:35] 2025-11-27 08:14:46,650 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 03:15:35] 2025-11-27 08:14:46,651 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:15:35] 2025-11-27 08:14:46,651 | INFO     | aborting loop
[2025-11-27 03:15:35] 2025-11-27 08:14:46,651 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:15:35] 2025-11-27 08:14:46,651 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 03:15:35] 2025-11-27 08:14:46,750 | INFO     | all data control threads have been joined
[2025-11-27 03:15:35] 2025-11-27 08:14:47,170 | INFO     | all payload control threads have been joined
[2025-11-27 03:15:35] 2025-11-27 08:14:47,655 | INFO     | [job] queue monitor thread has finished
[2025-11-27 03:15:35] 2025-11-27 08:14:47,656 | INFO     | [job] retrieve thread has finished
[2025-11-27 03:15:35] 2025-11-27 08:14:47,657 | INFO     | [job] job monitor thread has finished
[2025-11-27 03:15:35] 2025-11-27 08:14:47,728 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 03:15:35] 2025-11-27 08:14:47,756 | INFO     | [data] control thread has finished
[2025-11-27 03:15:35] 2025-11-27 08:14:47,864 | INFO     | all job control threads have been joined
[2025-11-27 03:15:35] 2025-11-27 08:14:47,883 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 03:15:35] 2025-11-27 08:14:47,992 | INFO     | [job] validate thread has finished
[2025-11-27 03:15:35] 2025-11-27 08:14:48,091 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 03:15:35] 2025-11-27 08:14:48,098 | INFO     | [data] copytool_in thread has finished
[2025-11-27 03:15:35] 2025-11-27 08:14:48,175 | INFO     | [payload] control thread has finished
[2025-11-27 03:15:35] 2025-11-27 08:14:48,402 | INFO     | [payload] failed_post thread has finished
[2025-11-27 03:15:35] 2025-11-27 08:14:48,532 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 03:15:35] 2025-11-27 08:14:48,657 | INFO     | [data] copytool_out thread has finished
[2025-11-27 03:15:35] 2025-11-27 08:14:48,783 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 03:15:35] 2025-11-27 08:14:48,869 | INFO     | [job] control thread has finished
[2025-11-27 03:15:35] 2025-11-27 08:14:49,014 | INFO     | [payload] validate_post thread has finished
[2025-11-27 03:15:35] 2025-11-27 08:14:52,789 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 03:15:35] 2025-11-27 08:15:16,123 | INFO     | PID=18949 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 03:15:35] 2025-11-27 08:15:16,124 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 03:15:35] 2025-11-27 08:15:16,124 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 03:15:35] 2025-11-27 08:15:16,124 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 03:15:35] 2025-11-27 08:15:29,055 | INFO     | [monitor] cgroup control has ended
[2025-11-27 03:15:35] 2025-11-27 08:15:30,482 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139637296887616)>', '<ExcThread(monitor, started 139636550653696)>']
[2025-11-27 03:15:35] 2025-11-27 08:15:31,198 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 03:15:35] 2025-11-27 08:15:31,198 | INFO     | [monitor] control thread has ended
[2025-11-27 03:15:35] 2025-11-27 08:15:35,490 | INFO     | all workflow threads have been joined
[2025-11-27 03:15:35] 2025-11-27 08:15:35,490 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 03:15:35] 2025-11-27 08:15:35,491 | INFO     | traces error code: 0
[2025-11-27 03:15:35] 2025-11-27 08:15:35,491 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 03:15:35] 2025-11-27 08:15:35,602 [wrapper] ==== pilot stdout END ====
[2025-11-27 03:15:35] 2025-11-27 08:15:35,607 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 03:15:35] 2025-11-27 08:15:35,611 [wrapper] pilotpid: 18949
[2025-11-27 03:15:35] 2025-11-27 08:15:35,616 [wrapper] Pilot exit status: 0
[2025-11-27 03:15:35] 2025-11-27 08:15:35,633 [wrapper] pandaids: 6897865007
[2025-11-27 03:15:35] 2025-11-27 08:15:35,685 [wrapper] cleanup supervisor_pilot 31204 18950
[2025-11-27 03:15:35] 2025-11-27 08:15:35,689 [wrapper] Test setup, not cleaning
[2025-11-27 03:15:35] 2025-11-27 08:15:35,694 [wrapper] apfmon messages muted
[2025-11-27 03:15:35] 2025-11-27 08:15:35,700 [wrapper] ==== wrapper stdout END ====
[2025-11-27 03:15:35] 2025-11-27 08:15:35,704 [wrapper] ==== wrapper stderr END ====
[2025-11-27 03:15:35]  *** Error codes and diagnostics ***
[2025-11-27 03:15:35]     "exeErrorCode": 0,
[2025-11-27 03:15:35]     "exeErrorDiag": "",
[2025-11-27 03:15:35]     "pilotErrorCode": 0,
[2025-11-27 03:15:35]     "pilotErrorDiag": "",
[2025-11-27 03:15:35]  *** Listing of results directory ***
[2025-11-27 03:15:35] total 1302168
[2025-11-27 03:15:35] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 03:15:35] -rwx------ 1 boincer umatlas     36292 Nov 25 12:02 runpilot2-wrapper.sh
[2025-11-27 03:15:35] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 12:02 queuedata.json
[2025-11-27 03:15:35] -rw-r--r-- 1 boincer umatlas       100 Nov 26 14:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 03:15:35] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 14:45 run_atlas
[2025-11-27 03:15:35] -rw-r--r-- 1 boincer umatlas       105 Nov 26 14:45 job.xml
[2025-11-27 03:15:35] -rw-r--r-- 2 boincer umatlas 407926788 Nov 26 14:45 EVNT.47483658._002350.pool.root.1
[2025-11-27 03:15:35] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 14:45 start_atlas.sh
[2025-11-27 03:15:35] drwxrwx--x 2 boincer umatlas      4096 Nov 26 14:45 shared
[2025-11-27 03:15:35] -rw-r--r-- 2 boincer umatlas    590111 Nov 26 14:45 input.tar.gz
[2025-11-27 03:15:35] -rw-r--r-- 1 boincer umatlas         0 Nov 26 14:45 boinc_lockfile
[2025-11-27 03:15:35] -rw-r--r-- 1 boincer umatlas      2786 Nov 26 14:45 pandaJob.out
[2025-11-27 03:15:35] -rw------- 1 boincer umatlas        57 Nov 26 14:45 setup.sh.local
[2025-11-27 03:15:35] -rw------- 1 boincer umatlas    991522 Nov 26 14:46 agis_schedconf.cvmfs.json
[2025-11-27 03:15:35] drwx------ 5 boincer umatlas      4096 Nov 26 14:46 pilot3
[2025-11-27 03:15:35] -rw-r--r-- 1 boincer umatlas       533 Nov 27 03:03 boinc_task_state.xml
[2025-11-27 03:15:35] -rw-r--r-- 1 boincer umatlas      5913 Nov 27 03:09 init_data.xml
[2025-11-27 03:15:35] -rw------- 1 boincer umatlas 905231991 Nov 27 03:13 HITS.47556161._003327.pool.root.1
[2025-11-27 03:15:35] -rw------- 1 boincer umatlas      1064 Nov 27 03:14 memory_monitor_summary.json
[2025-11-27 03:15:35] -rw------- 1 boincer umatlas   1516240 Nov 27 03:14 agis_ddmendpoints.agis.ALL.json
[2025-11-27 03:15:35] -rw------- 1 boincer umatlas   1980401 Nov 27 03:14 log.47556161._003327.job.log.tgz.1
[2025-11-27 03:15:35] -rw------- 1 boincer umatlas      8659 Nov 27 03:14 heartbeat.json
[2025-11-27 03:15:35] -rw------- 1 boincer umatlas        95 Nov 27 03:15 pilot_heartbeat.json
[2025-11-27 03:15:35] -rw-r--r-- 1 boincer umatlas        29 Nov 27 03:15 wrapper_checkpoint.txt
[2025-11-27 03:15:35] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 03:15 boinc_mmap_file
[2025-11-27 03:15:35] -rw------- 1 boincer umatlas      4746 Nov 27 03:15 pilotlog.txt
[2025-11-27 03:15:35] -rw------- 1 boincer umatlas   6187130 Nov 27 03:15 log.47556161._003327.job.log.1
[2025-11-27 03:15:35] -rw------- 1 boincer umatlas       353 Nov 27 03:15 output.list
[2025-11-27 03:15:35] -rw-r--r-- 1 boincer umatlas       620 Nov 27 03:15 runtime_log
[2025-11-27 03:15:35] -rw------- 1 boincer umatlas   8192000 Nov 27 03:15 result.tar.gz
[2025-11-27 03:15:35] -rw------- 1 boincer umatlas       668 Nov 27 03:15 TEBNDmlbBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmpkJKDmB0vFCn.diag
[2025-11-27 03:15:35] -rw-r--r-- 1 boincer umatlas      9343 Nov 27 03:15 runtime_log.err
[2025-11-27 03:15:35] -rw-r--r-- 1 boincer umatlas     21295 Nov 27 03:15 stderr.txt
[2025-11-27 03:15:35] HITS file was successfully produced:
[2025-11-27 03:15:35] -rw------- 1 boincer umatlas 905231991 Nov 27 03:13 shared/HITS.pool.root.1
[2025-11-27 03:15:35]  *** Contents of shared directory: ***
[2025-11-27 03:15:35] total 1290988
[2025-11-27 03:15:35] -rw-r--r-- 2 boincer umatlas 407926788 Nov 26 14:45 ATLAS.root_0
[2025-11-27 03:15:35] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 14:45 start_atlas.sh
[2025-11-27 03:15:35] -rw-r--r-- 2 boincer umatlas    590111 Nov 26 14:45 input.tar.gz
[2025-11-27 03:15:35] -rw------- 1 boincer umatlas 905231991 Nov 27 03:13 HITS.pool.root.1
[2025-11-27 03:15:35] -rw------- 1 boincer umatlas   8192000 Nov 27 03:15 result.tar.gz
03:15:37 (15231): run_atlas exited; CPU time 343299.599103
03:15:37 (15231): called boinc_finish(0)

</stderr_txt>
]]>

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