Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:20:12 (1908028): wrapper (7.7.26015): starting
02:20:12 (1908028): wrapper: running run_atlas (--nthreads 6)
[2025-11-27 02:20:12] Arguments: --nthreads 6
[2025-11-27 02:20:12] Threads: 6
[2025-11-27 02:20:12] Checking for CVMFS
[2025-11-27 02:20:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 02:20:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 02:20:13] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 02:20:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 02:20:13] 2.13.3.0 1581104 2258 76260 153342 2 81 22024671 81920000 0 130560 0 1165338 99.983 88750 1164 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://147.213.204.101:3128 1
[2025-11-27 02:20:13] CVMFS is ok
[2025-11-27 02:20:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 02:20:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 02:20:13] Further information can be found at the LHC@home message board.
[2025-11-27 02:20:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 02:20:13] Checking for apptainer binary...
[2025-11-27 02:20:13] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/var/lib/snapd/snap/bin)
[2025-11-27 02:20:13] apptainer is not installed, using version from CVMFS
[2025-11-27 02:20:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 02:20:13] monitor-atlas.iep
[2025-11-27 02:20:13] apptainer works
[2025-11-27 02:20:13] Set ATHENA_PROC_NUMBER=6
[2025-11-27 02:20:13] Set ATHENA_CORE_NUMBER=6
[2025-11-27 02:20:13] Starting ATLAS job with PandaID=6897394720
[2025-11-27 02:20:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 07:00:55]  *** The last 200 lines of the pilot log: ***
[2025-11-27 07:00:55] 2025-11-27 05:59:59,463 | INFO     | monitor loop #1271: job 0:6897394720 is in state 'finished'
[2025-11-27 07:00:55] 2025-11-27 05:59:59,463 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 07:00:55] 2025-11-27 05:59:59,585 | INFO     | time since job start (16777s) is within the limit (172800.0s)
[2025-11-27 07:00:55] 2025-11-27 06:00:00,676 | INFO     | PID=1911719 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 07:00:55] 2025-11-27 06:00:00,787 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 07:00:55] 2025-11-27 06:00:00,787 | INFO     | found 6 cores (6 cores per socket, 1 socket) , CPU MHz: 4299.114166666666
[2025-11-27 07:00:55] 2025-11-27 06:00:00,788 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6897394720/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 07:00:55] 2025-11-27 06:00:00,788 | INFO     | extracted standard info from prmon json
[2025-11-27 07:00:55] 2025-11-27 06:00:00,788 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 07:00:55] 2025-11-27 06:00:00,788 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 07:00:55] 2025-11-27 06:00:00,790 | INFO     | fitting pss+swap vs Time
[2025-11-27 07:00:55] 2025-11-27 06:00:00,790 | INFO     | sum of square deviations: 6448679050.0
[2025-11-27 07:00:55] 2025-11-27 06:00:00,791 | INFO     | sum of deviations: 73372406618.00002
[2025-11-27 07:00:55] 2025-11-27 06:00:00,791 | INFO     | mean x: 1764214801.0
[2025-11-27 07:00:55] 2025-11-27 06:00:00,791 | INFO     | mean y: 2743685.9454545453
[2025-11-27 07:00:55] 2025-11-27 06:00:00,791 | INFO     | intersect: -20070310770.13978
[2025-11-27 07:00:55] 2025-11-27 06:00:00,791 | INFO     | chi2: 2.550598143862012
[2025-11-27 07:00:55] 2025-11-27 06:00:00,791 | INFO     | sum of square deviations: 6103286527.5
[2025-11-27 07:00:55] 2025-11-27 06:00:00,792 | INFO     | sum of deviations: 110011841379.5
[2025-11-27 07:00:55] 2025-11-27 06:00:00,792 | INFO     | mean x: 1764214648.5
[2025-11-27 07:00:55] 2025-11-27 06:00:00,792 | INFO     | mean y: 2759702.951851852
[2025-11-27 07:00:55] 2025-11-27 06:00:00,792 | INFO     | intersect: -31797238739.800655
[2025-11-27 07:00:55] 2025-11-27 06:00:00,792 | INFO     | chi2: 1.438223297433801
[2025-11-27 07:00:55] 2025-11-27 06:00:00,792 | INFO     | current chi2=1.438223297433801 (change=43.61231302175647 %)
[2025-11-27 07:00:55] 2025-11-27 06:00:00,793 | INFO     | sum of square deviations: 5770452380.0
[2025-11-27 07:00:55] 2025-11-27 06:00:00,793 | INFO     | sum of deviations: 105794723895.99998
[2025-11-27 07:00:55] 2025-11-27 06:00:00,793 | INFO     | mean x: 1764214496.0
[2025-11-27 07:00:55] 2025-11-27 06:00:00,793 | INFO     | mean y: 2757771.0566037735
[2025-11-27 07:00:55] 2025-11-27 06:00:00,793 | INFO     | intersect: -32342121487.37699
[2025-11-27 07:00:55] 2025-11-27 06:00:00,794 | INFO     | chi2: 1.4384825178460678
[2025-11-27 07:00:55] 2025-11-27 06:00:00,794 | INFO     | current chi2=1.4384825178460678 (change=-0.018023655487253935 %)
[2025-11-27 07:00:55] 2025-11-27 06:00:00,794 | INFO     | right removable region: 264
[2025-11-27 07:00:55] 2025-11-27 06:00:00,794 | INFO     | sum of square deviations: 6103286527.5
[2025-11-27 07:00:55] 2025-11-27 06:00:00,794 | INFO     | sum of deviations: 28424189581.0
[2025-11-27 07:00:55] 2025-11-27 06:00:00,795 | INFO     | mean x: 1764214953.5
[2025-11-27 07:00:55] 2025-11-27 06:00:00,795 | INFO     | mean y: 2763362.407407407
[2025-11-27 07:00:55] 2025-11-27 06:00:00,795 | INFO     | intersect: -8213527987.174671
[2025-11-27 07:00:55] 2025-11-27 06:00:00,795 | INFO     | chi2: 1.1742693727020121
[2025-11-27 07:00:55] 2025-11-27 06:00:00,795 | INFO     | current chi2=1.1742693727020121 (change=53.961019867912974 %)
[2025-11-27 07:00:55] 2025-11-27 06:00:00,795 | INFO     | sum of square deviations: 5770452380.0
[2025-11-27 07:00:55] 2025-11-27 06:00:00,796 | INFO     | sum of deviations: 21306120748.0
[2025-11-27 07:00:55] 2025-11-27 06:00:00,796 | INFO     | mean x: 1764215106.0
[2025-11-27 07:00:55] 2025-11-27 06:00:00,796 | INFO     | mean y: 2766620.3471698114
[2025-11-27 07:00:55] 2025-11-27 06:00:00,796 | INFO     | intersect: -6511207951.934392
[2025-11-27 07:00:55] 2025-11-27 06:00:00,796 | INFO     | chi2: 1.1647863231432303
[2025-11-27 07:00:55] 2025-11-27 06:00:00,796 | INFO     | current chi2=1.1647863231432303 (change=0.8075702031605603 %)
[2025-11-27 07:00:55] 2025-11-27 06:00:00,796 | INFO     | left removable region: 20
[2025-11-27 07:00:55] 2025-11-27 06:00:00,796 | INFO     | sum of square deviations: 4504437945.0
[2025-11-27 07:00:55] 2025-11-27 06:00:00,797 | INFO     | sum of deviations: 44368781422.49996
[2025-11-27 07:00:55] 2025-11-27 06:00:00,797 | INFO     | mean x: 1764215075.5
[2025-11-27 07:00:55] 2025-11-27 06:00:00,797 | INFO     | mean y: 2786821.1106557376
[2025-11-27 07:00:55] 2025-11-27 06:00:00,797 | INFO     | intersect: -17374758174.048283
[2025-11-27 07:00:55] 2025-11-27 06:00:00,797 | INFO     | chi2: 0.034471883923181415
[2025-11-27 07:00:55] 2025-11-27 06:00:00,797 | INFO     | current memory leak: 9.85 B/s (using 244 data points, chi2=0.03)
[2025-11-27 07:00:55] 2025-11-27 06:00:00,797 | INFO     | could have reported an average CPU frequency of 4305 MHz (13 samples)
[2025-11-27 07:00:55] 2025-11-27 06:00:00,797 | INFO     | ..............................
[2025-11-27 07:00:55] 2025-11-27 06:00:00,797 | INFO     | . Timing measurements:
[2025-11-27 07:00:55] 2025-11-27 06:00:00,797 | INFO     | . get job = 0 s
[2025-11-27 07:00:55] 2025-11-27 06:00:00,797 | INFO     | . initial setup = 1 s
[2025-11-27 07:00:55] 2025-11-27 06:00:00,797 | INFO     | . payload setup = 5 s
[2025-11-27 07:00:55] 2025-11-27 06:00:00,797 | INFO     | . stage-in = 0 s
[2025-11-27 07:00:55] 2025-11-27 06:00:00,797 | INFO     | . payload execution = 16742 s
[2025-11-27 07:00:55] 2025-11-27 06:00:00,797 | INFO     | . stage-out = 1 s
[2025-11-27 07:00:55] 2025-11-27 06:00:00,797 | INFO     | . log creation = 0 s
[2025-11-27 07:00:55] 2025-11-27 06:00:00,797 | INFO     | ..............................
[2025-11-27 07:00:55] 2025-11-27 06:00:00,827 | INFO     | 
[2025-11-27 07:00:55] 2025-11-27 06:00:00,827 | INFO     | job summary report
[2025-11-27 07:00:55] 2025-11-27 06:00:00,827 | INFO     | --------------------------------------------------
[2025-11-27 07:00:55] 2025-11-27 06:00:00,827 | INFO     | PanDA job id: 6897394720
[2025-11-27 07:00:55] 2025-11-27 06:00:00,827 | INFO     | task id: 47556161
[2025-11-27 07:00:55] 2025-11-27 06:00:00,828 | INFO     | errors: (none)
[2025-11-27 07:00:55] 2025-11-27 06:00:00,828 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 07:00:55] 2025-11-27 06:00:00,828 | INFO     | pilot state: finished 
[2025-11-27 07:00:55] 2025-11-27 06:00:00,828 | INFO     | transexitcode: 0
[2025-11-27 07:00:55] 2025-11-27 06:00:00,828 | INFO     | exeerrorcode: 0
[2025-11-27 07:00:55] 2025-11-27 06:00:00,828 | INFO     | exeerrordiag: 
[2025-11-27 07:00:55] 2025-11-27 06:00:00,828 | INFO     | exitcode: 0
[2025-11-27 07:00:55] 2025-11-27 06:00:00,828 | INFO     | exitmsg: OK
[2025-11-27 07:00:55] 2025-11-27 06:00:00,828 | INFO     | cpuconsumptiontime: 98439 s
[2025-11-27 07:00:55] 2025-11-27 06:00:00,828 | INFO     | nevents: 1000
[2025-11-27 07:00:55] 2025-11-27 06:00:00,828 | INFO     | neventsw: 0
[2025-11-27 07:00:55] 2025-11-27 06:00:00,828 | INFO     | pid: 1918290
[2025-11-27 07:00:55] 2025-11-27 06:00:00,828 | INFO     | pgrp: 1918290
[2025-11-27 07:00:55] 2025-11-27 06:00:00,828 | INFO     | corecount: 6
[2025-11-27 07:00:55] 2025-11-27 06:00:00,828 | INFO     | event service: False
[2025-11-27 07:00:55] 2025-11-27 06:00:00,828 | INFO     | sizes: {0: 2284265, 1: 2284265, 4: 2284555, 11: 2284583, 16751: 2317624, 16754: 2326618, 16758: 2326830, 16763: 2327076}
[2025-11-27 07:00:55] 2025-11-27 06:00:00,828 | INFO     | --------------------------------------------------
[2025-11-27 07:00:55] 2025-11-27 06:00:00,828 | INFO     | 
[2025-11-27 07:00:55] 2025-11-27 06:00:00,828 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-11-27 07:00:55] 2025-11-27 06:00:00,837 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 07:00:55] 2025-11-27 06:00:00,837 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 07:00:55] 2025-11-27 06:00:00,837 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 07:00:55] 2025-11-27 06:00:00,837 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 07:00:55] 2025-11-27 06:00:00,837 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 07:00:55] 2025-11-27 06:00:00,837 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 07:00:55] 2025-11-27 06:00:00,837 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 07:00:55] 2025-11-27 06:00:00,837 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 07:00:55] 2025-11-27 06:00:00,837 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 07:00:55] 2025-11-27 06:00:00,837 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 07:00:55] 2025-11-27 06:00:00,837 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 07:00:55] 2025-11-27 06:00:00,837 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 07:00:55] 2025-11-27 06:00:00,837 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 07:00:55] 2025-11-27 06:00:00,837 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 07:00:55] 2025-11-27 06:00:00,837 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 07:00:55] 2025-11-27 06:00:00,837 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 07:00:55] 2025-11-27 06:00:00,837 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 07:00:55] 2025-11-27 06:00:00,837 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 07:00:55] 2025-11-27 06:00:00,837 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 07:00:55] 2025-11-27 06:00:00,837 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 07:00:55] 2025-11-27 06:00:00,838 | INFO     | job 6897394720 has completed (purged errors)
[2025-11-27 07:00:55] 2025-11-27 06:00:00,838 | INFO     | overall cleanup function is called
[2025-11-27 07:00:55] 2025-11-27 06:00:01,842 | INFO     | --- collectZombieJob: --- 10, [1918290]
[2025-11-27 07:00:55] 2025-11-27 06:00:01,842 | INFO     | zombie collector waiting for pid 1918290
[2025-11-27 07:00:55] 2025-11-27 06:00:01,842 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 07:00:55] 2025-11-27 06:00:01,842 | INFO     | collected zombie processes
[2025-11-27 07:00:55] 2025-11-27 06:00:01,843 | INFO     | will attempt to kill all subprocesses of pid=1918290
[2025-11-27 07:00:55] 2025-11-27 06:00:01,877 | INFO     | process IDs to be killed: [1918290] (in reverse order)
[2025-11-27 07:00:55] 2025-11-27 06:00:01,895 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 07:00:55] 2025-11-27 06:00:01,895 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 07:00:55] 2025-11-27 06:00:01,896 | INFO     | did not find any defunct processes belonging to 1918290
[2025-11-27 07:00:55] 2025-11-27 06:00:01,897 | INFO     | did not find any defunct processes belonging to 1918290
[2025-11-27 07:00:55] 2025-11-27 06:00:01,897 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 07:00:55] 2025-11-27 06:00:01,897 | INFO     | ready for new job
[2025-11-27 07:00:55] 2025-11-27 06:00:01,897 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 07:00:55] 2025-11-27 06:00:01,898 | INFO     | ***************************************
[2025-11-27 07:00:55] 2025-11-27 06:00:01,898 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 07:00:55] 2025-11-27 06:00:01,898 | INFO     | ***************************************
[2025-11-27 07:00:55] 2025-11-27 06:00:01,898 | INFO     | 
[2025-11-27 07:00:55] 2025-11-27 06:00:01,898 | INFO     | architecture information:
[2025-11-27 07:00:55] 2025-11-27 06:00:01,898 | INFO     | executing command: cat /etc/os-release
[2025-11-27 07:00:55] 2025-11-27 06:00:01,904 | INFO     | cat /etc/os-release:
[2025-11-27 07:00:55] NAME="CentOS Linux"
[2025-11-27 07:00:55] VERSION="7 (Core)"
[2025-11-27 07:00:55] ID="centos"
[2025-11-27 07:00:55] ID_LIKE="rhel fedora"
[2025-11-27 07:00:55] VERSION_ID="7"
[2025-11-27 07:00:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 07:00:55] ANSI_COLOR="0;31"
[2025-11-27 07:00:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 07:00:55] HOME_URL="https://www.centos.org/"
[2025-11-27 07:00:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 07:00:55] 
[2025-11-27 07:00:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 07:00:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 07:00:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 07:00:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 07:00:55] 
[2025-11-27 07:00:55] 2025-11-27 06:00:01,904 | INFO     | ***************************************
[2025-11-27 07:00:55] 2025-11-27 06:00:02,406 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-11-27 07:00:55] 2025-11-27 06:00:02,416 | INFO     | sufficient remaining disk space (870160793600 B)
[2025-11-27 07:00:55] 2025-11-27 06:00:02,416 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 07:00:55] 2025-11-27 06:00:02,416 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 07:00:55] 2025-11-27 06:00:02,416 | INFO     | update_server=False
[2025-11-27 07:00:55] 2025-11-27 06:00:02,416 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 07:00:55] 2025-11-27 06:00:02,416 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 07:00:55] 2025-11-27 06:00:02,416 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 07:00:55] 2025-11-27 06:00:02,738 | INFO     | all data control threads have been joined
[2025-11-27 07:00:55] 2025-11-27 06:00:02,971 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 07:00:55] 2025-11-27 06:00:02,971 | INFO     | aborting loop
[2025-11-27 07:00:55] 2025-11-27 06:00:03,035 | INFO     | all job control threads have been joined
[2025-11-27 07:00:55] 2025-11-27 06:00:03,420 | INFO     | [job] retrieve thread has finished
[2025-11-27 07:00:55] 2025-11-27 06:00:03,422 | INFO     | [job] queue monitor thread has finished
[2025-11-27 07:00:55] 2025-11-27 06:00:03,523 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 07:00:55] 2025-11-27 06:00:03,606 | INFO     | [payload] failed_post thread has finished
[2025-11-27 07:00:55] 2025-11-27 06:00:03,740 | INFO     | all payload control threads have been joined
[2025-11-27 07:00:55] 2025-11-27 06:00:03,743 | INFO     | [data] control thread has finished
[2025-11-27 07:00:55] 2025-11-27 06:00:03,976 | INFO     | [job] job monitor thread has finished
[2025-11-27 07:00:55] 2025-11-27 06:00:04,040 | INFO     | [job] control thread has finished
[2025-11-27 07:00:55] 2025-11-27 06:00:04,109 | INFO     | [data] copytool_in thread has finished
[2025-11-27 07:00:55] 2025-11-27 06:00:04,159 | INFO     | [payload] validate_post thread has finished
[2025-11-27 07:00:55] 2025-11-27 06:00:04,232 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 07:00:55] 2025-11-27 06:00:04,422 | INFO     | [data] copytool_out thread has finished
[2025-11-27 07:00:55] 2025-11-27 06:00:04,681 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 07:00:55] 2025-11-27 06:00:04,693 | INFO     | [job] validate thread has finished
[2025-11-27 07:00:55] 2025-11-27 06:00:04,745 | INFO     | [payload] control thread has finished
[2025-11-27 07:00:55] 2025-11-27 06:00:04,774 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 07:00:55] 2025-11-27 06:00:05,510 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 07:00:55] 2025-11-27 06:00:09,516 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 07:00:55] 2025-11-27 06:00:32,810 | INFO     | PID=1911719 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 07:00:55] 2025-11-27 06:00:32,810 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 07:00:55] 2025-11-27 06:00:32,810 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 07:00:55] 2025-11-27 06:00:32,810 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 07:00:55] 2025-11-27 06:00:50,069 | INFO     | [monitor] cgroup control has ended
[2025-11-27 07:00:55] 2025-11-27 06:00:50,238 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139827190572864)>', '<ExcThread(monitor, started 139826653280000)>']
[2025-11-27 07:00:55] 2025-11-27 06:00:50,897 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 07:00:55] 2025-11-27 06:00:50,897 | INFO     | [monitor] control thread has ended
[2025-11-27 07:00:55] 2025-11-27 06:00:55,264 | INFO     | all workflow threads have been joined
[2025-11-27 07:00:55] 2025-11-27 06:00:55,264 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 07:00:55] 2025-11-27 06:00:55,264 | INFO     | traces error code: 0
[2025-11-27 07:00:55] 2025-11-27 06:00:55,265 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 07:00:55] 2025-11-27 06:00:55,312 [wrapper] ==== pilot stdout END ====
[2025-11-27 07:00:55] 2025-11-27 06:00:55,313 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 07:00:55] 2025-11-27 06:00:55,314 [wrapper] pilotpid: 1911719
[2025-11-27 07:00:55] 2025-11-27 06:00:55,315 [wrapper] Pilot exit status: 0
[2025-11-27 07:00:55] 2025-11-27 06:00:55,319 [wrapper] pandaids: 6897394720
[2025-11-27 07:00:55] 2025-11-27 06:00:55,328 [wrapper] cleanup supervisor_pilot 1946092 1911720
[2025-11-27 07:00:55] 2025-11-27 06:00:55,329 [wrapper] Test setup, not cleaning
[2025-11-27 07:00:55] 2025-11-27 06:00:55,330 [wrapper] apfmon messages muted
[2025-11-27 07:00:55] 2025-11-27 06:00:55,331 [wrapper] ==== wrapper stdout END ====
[2025-11-27 07:00:55] 2025-11-27 06:00:55,332 [wrapper] ==== wrapper stderr END ====
[2025-11-27 07:00:55]  *** Error codes and diagnostics ***
[2025-11-27 07:00:55]     "exeErrorCode": 0,
[2025-11-27 07:00:55]     "exeErrorDiag": "",
[2025-11-27 07:00:55]     "pilotErrorCode": 0,
[2025-11-27 07:00:55]     "pilotErrorDiag": "",
[2025-11-27 07:00:55]  *** Listing of results directory ***
[2025-11-27 07:00:55] total 1313948
[2025-11-27 07:00:55] -rw-r--r-- 1 boinc boinc    576529 Nov 25 17:48 pilot3.tar.gz
[2025-11-27 07:00:55] -rw-r--r-- 1 boinc boinc      5112 Nov 25 17:55 queuedata.json
[2025-11-27 07:00:55] -rwx------ 1 boinc boinc     36292 Nov 25 17:57 runpilot2-wrapper.sh
[2025-11-27 07:00:55] -rw-r--r-- 1 boinc boinc       100 Nov 27 02:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 07:00:55] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 02:20 run_atlas
[2025-11-27 07:00:55] -rw-r--r-- 1 boinc boinc       105 Nov 27 02:20 job.xml
[2025-11-27 07:00:55] -rw-r--r-- 2 boinc boinc 410430844 Nov 27 02:20 EVNT.47483658._002234.pool.root.1
[2025-11-27 07:00:55] -rw-r--r-- 2 boinc boinc     15847 Nov 27 02:20 start_atlas.sh
[2025-11-27 07:00:55] drwxrwx--x 2 boinc boinc        68 Nov 27 02:20 shared
[2025-11-27 07:00:55] -rw-r--r-- 2 boinc boinc    590108 Nov 27 02:20 input.tar.gz
[2025-11-27 07:00:55] -rw-r--r-- 1 boinc boinc      6551 Nov 27 02:20 init_data.xml
[2025-11-27 07:00:55] -rw-r--r-- 1 boinc boinc         0 Nov 27 02:20 boinc_lockfile
[2025-11-27 07:00:55] -rw-r--r-- 1 boinc boinc      2786 Nov 27 02:20 pandaJob.out
[2025-11-27 07:00:55] -rw------- 1 boinc boinc    991530 Nov 27 02:20 agis_schedconf.cvmfs.json
[2025-11-27 07:00:55] drwx------ 5 boinc boinc      4096 Nov 27 02:20 pilot3
[2025-11-27 07:00:55] -rw-r--r-- 1 boinc boinc       531 Nov 27 06:56 boinc_task_state.xml
[2025-11-27 07:00:55] -rw------- 1 boinc boinc 923684605 Nov 27 06:59 HITS.47556161._002179.pool.root.1
[2025-11-27 07:00:55] -rw------- 1 boinc boinc        95 Nov 27 06:59 pilot_heartbeat.json
[2025-11-27 07:00:55] -rw------- 1 boinc boinc      1030 Nov 27 06:59 memory_monitor_summary.json
[2025-11-27 07:00:55] -rw------- 1 boinc boinc   1516240 Nov 27 06:59 agis_ddmendpoints.agis.ALL.json
[2025-11-27 07:00:55] -rw------- 1 boinc boinc   1351763 Nov 27 06:59 log.47556161._002179.job.log.tgz.1
[2025-11-27 07:00:55] -rw------- 1 boinc boinc      8602 Nov 27 07:00 heartbeat.json
[2025-11-27 07:00:55] -rw-r--r-- 1 boinc boinc      8192 Nov 27 07:00 boinc_mmap_file
[2025-11-27 07:00:55] -rw-r--r-- 1 boinc boinc        28 Nov 27 07:00 wrapper_checkpoint.txt
[2025-11-27 07:00:55] -rw------- 1 boinc boinc      4749 Nov 27 07:00 pilotlog.txt
[2025-11-27 07:00:55] -rw------- 1 boinc boinc   2381097 Nov 27 07:00 log.47556161._002179.job.log.1
[2025-11-27 07:00:55] -rw------- 1 boinc boinc       353 Nov 27 07:00 output.list
[2025-11-27 07:00:55] -rw-r--r-- 1 boinc boinc       620 Nov 27 07:00 runtime_log
[2025-11-27 07:00:55] -rw------- 1 boinc boinc   3747840 Nov 27 07:00 result.tar.gz
[2025-11-27 07:00:55] -rw-r--r-- 1 boinc boinc      8831 Nov 27 07:00 runtime_log.err
[2025-11-27 07:00:55] -rw------- 1 boinc boinc       662 Nov 27 07:00 GZBNDmDXBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmuVMKDm9CSefn.diag
[2025-11-27 07:00:55] -rw-r--r-- 1 boinc boinc     21509 Nov 27 07:00 stderr.txt
[2025-11-27 07:00:55] HITS file was successfully produced:
[2025-11-27 07:00:55] -rw------- 1 boinc boinc 923684605 Nov 27 06:59 shared/HITS.pool.root.1
[2025-11-27 07:00:55]  *** Contents of shared directory: ***
[2025-11-27 07:00:55] total 1307104
[2025-11-27 07:00:55] -rw-r--r-- 2 boinc boinc 410430844 Nov 27 02:20 ATLAS.root_0
[2025-11-27 07:00:55] -rw-r--r-- 2 boinc boinc     15847 Nov 27 02:20 start_atlas.sh
[2025-11-27 07:00:55] -rw-r--r-- 2 boinc boinc    590108 Nov 27 02:20 input.tar.gz
[2025-11-27 07:00:55] -rw------- 1 boinc boinc 923684605 Nov 27 06:59 HITS.pool.root.1
[2025-11-27 07:00:55] -rw------- 1 boinc boinc   3747840 Nov 27 07:00 result.tar.gz
07:00:56 (1908028): run_atlas exited; CPU time 98445.090779
07:00:56 (1908028): called boinc_finish(0)

</stderr_txt>
]]>

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