Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:37:23 (1864356): wrapper (7.7.26015): starting
21:37:23 (1864356): wrapper: running run_atlas (--nthreads 6)
[2025-11-26 21:37:23] Arguments: --nthreads 6
[2025-11-26 21:37:23] Threads: 6
[2025-11-26 21:37:23] Checking for CVMFS
[2025-11-26 21:37:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 21:37:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 21:37:23] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 21:37:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 21:37:23] 2.13.3.0 1581104 1975 73532 153334 0 81 21976276 81920001 0 130560 0 1009495 99.983 78124 1047 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://147.213.204.101:3128 1
[2025-11-26 21:37:23] CVMFS is ok
[2025-11-26 21:37:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 21:37:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 21:37:23] Further information can be found at the LHC@home message board.
[2025-11-26 21:37:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 21:37:23] Checking for apptainer binary...
[2025-11-26 21:37:23] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/var/lib/snapd/snap/bin)
[2025-11-26 21:37:23] apptainer is not installed, using version from CVMFS
[2025-11-26 21:37:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 21:37:23] monitor-atlas.iep
[2025-11-26 21:37:23] apptainer works
[2025-11-26 21:37:23] Set ATHENA_PROC_NUMBER=6
[2025-11-26 21:37:23] Set ATHENA_CORE_NUMBER=6
[2025-11-26 21:37:23] Starting ATLAS job with PandaID=6896766785
[2025-11-26 21:37:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 02:20:06]  *** The last 200 lines of the pilot log: ***
[2025-11-27 02:20:06] 2025-11-27 01:19:21,079 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:20:06] 2025-11-27 01:19:21,228 | INFO     | time since job start (16909s) is within the limit (172800.0s)
[2025-11-27 02:20:06] 2025-11-27 01:19:22,291 | INFO     | PID=1868057 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 02:20:06] 2025-11-27 01:19:22,689 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 02:20:06] 2025-11-27 01:19:22,690 | INFO     | found 6 cores (6 cores per socket, 1 socket) , CPU MHz: 4300.595
[2025-11-27 02:20:06] 2025-11-27 01:19:22,690 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6896766785/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 02:20:06] 2025-11-27 01:19:22,690 | INFO     | extracted standard info from prmon json
[2025-11-27 02:20:06] 2025-11-27 01:19:22,690 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 02:20:06] 2025-11-27 01:19:22,690 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 02:20:06] 2025-11-27 01:19:22,692 | INFO     | fitting pss+swap vs Time
[2025-11-27 02:20:06] 2025-11-27 01:19:22,692 | INFO     | sum of square deviations: 6590404498.0
[2025-11-27 02:20:06] 2025-11-27 01:19:22,693 | INFO     | sum of deviations: 107979724986.00005
[2025-11-27 02:20:06] 2025-11-27 01:19:22,693 | INFO     | mean x: 1764197891.0
[2025-11-27 02:20:06] 2025-11-27 01:19:22,693 | INFO     | mean y: 2711596.072202166
[2025-11-27 02:20:06] 2025-11-27 01:19:22,693 | INFO     | intersect: -28902585969.330933
[2025-11-27 02:20:06] 2025-11-27 01:19:22,693 | INFO     | chi2: 2.533145023504615
[2025-11-27 02:20:06] 2025-11-27 01:19:22,694 | INFO     | sum of square deviations: 6239923508.0
[2025-11-27 02:20:06] 2025-11-27 01:19:22,694 | INFO     | sum of deviations: 145211234622.99997
[2025-11-27 02:20:06] 2025-11-27 01:19:22,694 | INFO     | mean x: 1764197738.5
[2025-11-27 02:20:06] 2025-11-27 01:19:22,694 | INFO     | mean y: 2727644.3235294116
[2025-11-27 02:20:06] 2025-11-27 01:19:22,694 | INFO     | intersect: -41052476221.27639
[2025-11-27 02:20:06] 2025-11-27 01:19:22,695 | INFO     | chi2: 1.4205747574521659
[2025-11-27 02:20:06] 2025-11-27 01:19:22,695 | INFO     | current chi2=1.4205747574521659 (change=43.920512080007335 %)
[2025-11-27 02:20:06] 2025-11-27 01:19:22,695 | INFO     | sum of square deviations: 5902093918.0
[2025-11-27 02:20:06] 2025-11-27 01:19:22,696 | INFO     | sum of deviations: 139706470549.00003
[2025-11-27 02:20:06] 2025-11-27 01:19:22,696 | INFO     | mean x: 1764197586.0
[2025-11-27 02:20:06] 2025-11-27 01:19:22,696 | INFO     | mean y: 2725159.6254681647
[2025-11-27 02:20:06] 2025-11-27 01:19:22,696 | INFO     | intersect: -41756999696.5736
[2025-11-27 02:20:06] 2025-11-27 01:19:22,696 | INFO     | chi2: 1.420462752662691
[2025-11-27 02:20:06] 2025-11-27 01:19:22,696 | INFO     | current chi2=1.420462752662691 (change=0.007884469922287791 %)
[2025-11-27 02:20:06] 2025-11-27 01:19:22,696 | INFO     | right removable region: 266
[2025-11-27 02:20:06] 2025-11-27 01:19:22,696 | INFO     | sum of square deviations: 6239923508.0
[2025-11-27 02:20:06] 2025-11-27 01:19:22,697 | INFO     | sum of deviations: 63880707401.50001
[2025-11-27 02:20:06] 2025-11-27 01:19:22,697 | INFO     | mean x: 1764198043.5
[2025-11-27 02:20:06] 2025-11-27 01:19:22,697 | INFO     | mean y: 2730618.393382353
[2025-11-27 02:20:06] 2025-11-27 01:19:22,697 | INFO     | intersect: -18058102798.97714
[2025-11-27 02:20:06] 2025-11-27 01:19:22,697 | INFO     | chi2: 1.1843270346707209
[2025-11-27 02:20:06] 2025-11-27 01:19:22,697 | INFO     | current chi2=1.1843270346707209 (change=53.24677333190343 %)
[2025-11-27 02:20:06] 2025-11-27 01:19:22,697 | INFO     | sum of square deviations: 5902093918.0
[2025-11-27 02:20:06] 2025-11-27 01:19:22,698 | INFO     | sum of deviations: 58510700715.00001
[2025-11-27 02:20:06] 2025-11-27 01:19:22,698 | INFO     | mean x: 1764198196.0
[2025-11-27 02:20:06] 2025-11-27 01:19:22,698 | INFO     | mean y: 2733038.992509363
[2025-11-27 02:20:06] 2025-11-27 01:19:22,698 | INFO     | intersect: -17486733255.891163
[2025-11-27 02:20:06] 2025-11-27 01:19:22,698 | INFO     | chi2: 1.1838604926582734
[2025-11-27 02:20:06] 2025-11-27 01:19:22,698 | INFO     | current chi2=1.1838604926582734 (change=0.03939300537686021 %)
[2025-11-27 02:20:06] 2025-11-27 01:19:22,698 | INFO     | left removable region: 20
[2025-11-27 02:20:06] 2025-11-27 01:19:22,698 | INFO     | sum of square deviations: 4616114457.5
[2025-11-27 02:20:06] 2025-11-27 01:19:22,699 | INFO     | sum of deviations: 83558979282.49998
[2025-11-27 02:20:06] 2025-11-27 01:19:22,699 | INFO     | mean x: 1764198165.5
[2025-11-27 02:20:06] 2025-11-27 01:19:22,699 | INFO     | mean y: 2750847.6544715445
[2025-11-27 02:20:06] 2025-11-27 01:19:22,699 | INFO     | intersect: -31932028785.404266
[2025-11-27 02:20:06] 2025-11-27 01:19:22,699 | INFO     | chi2: 0.05056049059072501
[2025-11-27 02:20:06] 2025-11-27 01:19:22,699 | INFO     | current memory leak: 18.10 B/s (using 246 data points, chi2=0.05)
[2025-11-27 02:20:06] 2025-11-27 01:19:22,699 | INFO     | could have reported an average CPU frequency of 4303 MHz (13 samples)
[2025-11-27 02:20:06] 2025-11-27 01:19:22,700 | INFO     | ..............................
[2025-11-27 02:20:06] 2025-11-27 01:19:22,700 | INFO     | . Timing measurements:
[2025-11-27 02:20:06] 2025-11-27 01:19:22,700 | INFO     | . get job = 0 s
[2025-11-27 02:20:06] 2025-11-27 01:19:22,700 | INFO     | . initial setup = 1 s
[2025-11-27 02:20:06] 2025-11-27 01:19:22,700 | INFO     | . payload setup = 4 s
[2025-11-27 02:20:06] 2025-11-27 01:19:22,700 | INFO     | . stage-in = 0 s
[2025-11-27 02:20:06] 2025-11-27 01:19:22,700 | INFO     | . payload execution = 16878 s
[2025-11-27 02:20:06] 2025-11-27 01:19:22,700 | INFO     | . stage-out = 1 s
[2025-11-27 02:20:06] 2025-11-27 01:19:22,700 | INFO     | . log creation = 0 s
[2025-11-27 02:20:06] 2025-11-27 01:19:22,700 | INFO     | ..............................
[2025-11-27 02:20:06] 2025-11-27 01:19:22,729 | INFO     | 
[2025-11-27 02:20:06] 2025-11-27 01:19:22,729 | INFO     | job summary report
[2025-11-27 02:20:06] 2025-11-27 01:19:22,729 | INFO     | --------------------------------------------------
[2025-11-27 02:20:06] 2025-11-27 01:19:22,729 | INFO     | PanDA job id: 6896766785
[2025-11-27 02:20:06] 2025-11-27 01:19:22,729 | INFO     | task id: 47556185
[2025-11-27 02:20:06] 2025-11-27 01:19:22,730 | INFO     | errors: (none)
[2025-11-27 02:20:06] 2025-11-27 01:19:22,730 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 02:20:06] 2025-11-27 01:19:22,730 | INFO     | pilot state: finished 
[2025-11-27 02:20:06] 2025-11-27 01:19:22,730 | INFO     | transexitcode: 0
[2025-11-27 02:20:06] 2025-11-27 01:19:22,730 | INFO     | exeerrorcode: 0
[2025-11-27 02:20:06] 2025-11-27 01:19:22,730 | INFO     | exeerrordiag: 
[2025-11-27 02:20:06] 2025-11-27 01:19:22,730 | INFO     | exitcode: 0
[2025-11-27 02:20:06] 2025-11-27 01:19:22,730 | INFO     | exitmsg: OK
[2025-11-27 02:20:06] 2025-11-27 01:19:22,730 | INFO     | cpuconsumptiontime: 99108 s
[2025-11-27 02:20:06] 2025-11-27 01:19:22,730 | INFO     | nevents: 1000
[2025-11-27 02:20:06] 2025-11-27 01:19:22,730 | INFO     | neventsw: 0
[2025-11-27 02:20:06] 2025-11-27 01:19:22,730 | INFO     | pid: 1874630
[2025-11-27 02:20:06] 2025-11-27 01:19:22,730 | INFO     | pgrp: 1874630
[2025-11-27 02:20:06] 2025-11-27 01:19:22,730 | INFO     | corecount: 6
[2025-11-27 02:20:06] 2025-11-27 01:19:22,730 | INFO     | event service: False
[2025-11-27 02:20:06] 2025-11-27 01:19:22,730 | INFO     | sizes: {0: 2284312, 4: 2284574, 11: 2284602, 16886: 2317698, 16888: 2326692, 16889: 2326748, 16896: 2327122}
[2025-11-27 02:20:06] 2025-11-27 01:19:22,730 | INFO     | --------------------------------------------------
[2025-11-27 02:20:06] 2025-11-27 01:19:22,730 | INFO     | 
[2025-11-27 02:20:06] 2025-11-27 01:19:22,730 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-11-27 02:20:06] 2025-11-27 01:19:22,739 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 02:20:06] 2025-11-27 01:19:22,739 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 02:20:06] 2025-11-27 01:19:22,739 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 02:20:06] 2025-11-27 01:19:22,739 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 02:20:06] 2025-11-27 01:19:22,739 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 02:20:06] 2025-11-27 01:19:22,739 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 02:20:06] 2025-11-27 01:19:22,739 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 02:20:06] 2025-11-27 01:19:22,739 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 02:20:06] 2025-11-27 01:19:22,739 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 02:20:06] 2025-11-27 01:19:22,739 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 02:20:06] 2025-11-27 01:19:22,739 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 02:20:06] 2025-11-27 01:19:22,739 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 02:20:06] 2025-11-27 01:19:22,739 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 02:20:06] 2025-11-27 01:19:22,739 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 02:20:06] 2025-11-27 01:19:22,739 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 02:20:06] 2025-11-27 01:19:22,739 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 02:20:06] 2025-11-27 01:19:22,739 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 02:20:06] 2025-11-27 01:19:22,739 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 02:20:06] 2025-11-27 01:19:22,739 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 02:20:06] 2025-11-27 01:19:22,739 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 02:20:06] 2025-11-27 01:19:22,739 | INFO     | job 6896766785 has completed (purged errors)
[2025-11-27 02:20:06] 2025-11-27 01:19:22,740 | INFO     | overall cleanup function is called
[2025-11-27 02:20:06] 2025-11-27 01:19:23,748 | INFO     | --- collectZombieJob: --- 10, [1874630]
[2025-11-27 02:20:06] 2025-11-27 01:19:23,748 | INFO     | zombie collector waiting for pid 1874630
[2025-11-27 02:20:06] 2025-11-27 01:19:23,748 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 02:20:06] 2025-11-27 01:19:23,749 | INFO     | collected zombie processes
[2025-11-27 02:20:06] 2025-11-27 01:19:23,749 | INFO     | will attempt to kill all subprocesses of pid=1874630
[2025-11-27 02:20:06] 2025-11-27 01:19:23,784 | INFO     | process IDs to be killed: [1874630] (in reverse order)
[2025-11-27 02:20:06] 2025-11-27 01:19:23,801 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 02:20:06] 2025-11-27 01:19:23,801 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 02:20:06] 2025-11-27 01:19:23,802 | INFO     | did not find any defunct processes belonging to 1874630
[2025-11-27 02:20:06] 2025-11-27 01:19:23,803 | INFO     | did not find any defunct processes belonging to 1874630
[2025-11-27 02:20:06] 2025-11-27 01:19:23,804 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 02:20:06] 2025-11-27 01:19:23,804 | INFO     | ready for new job
[2025-11-27 02:20:06] 2025-11-27 01:19:23,804 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 02:20:06] 2025-11-27 01:19:23,804 | INFO     | ***************************************
[2025-11-27 02:20:06] 2025-11-27 01:19:23,804 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 02:20:06] 2025-11-27 01:19:23,804 | INFO     | ***************************************
[2025-11-27 02:20:06] 2025-11-27 01:19:23,804 | INFO     | 
[2025-11-27 02:20:06] 2025-11-27 01:19:23,805 | INFO     | architecture information:
[2025-11-27 02:20:06] 2025-11-27 01:19:23,805 | INFO     | executing command: cat /etc/os-release
[2025-11-27 02:20:06] 2025-11-27 01:19:23,810 | INFO     | cat /etc/os-release:
[2025-11-27 02:20:06] NAME="CentOS Linux"
[2025-11-27 02:20:06] VERSION="7 (Core)"
[2025-11-27 02:20:06] ID="centos"
[2025-11-27 02:20:06] ID_LIKE="rhel fedora"
[2025-11-27 02:20:06] VERSION_ID="7"
[2025-11-27 02:20:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 02:20:06] ANSI_COLOR="0;31"
[2025-11-27 02:20:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 02:20:06] HOME_URL="https://www.centos.org/"
[2025-11-27 02:20:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 02:20:06] 
[2025-11-27 02:20:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 02:20:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 02:20:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 02:20:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 02:20:06] 
[2025-11-27 02:20:06] 2025-11-27 01:19:23,810 | INFO     | ***************************************
[2025-11-27 02:20:06] 2025-11-27 01:19:24,313 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-11-27 02:20:06] 2025-11-27 01:19:24,323 | INFO     | sufficient remaining disk space (870576029696 B)
[2025-11-27 02:20:06] 2025-11-27 01:19:24,323 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 02:20:06] 2025-11-27 01:19:24,323 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 02:20:06] 2025-11-27 01:19:24,324 | INFO     | update_server=False
[2025-11-27 02:20:06] 2025-11-27 01:19:24,324 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 02:20:06] 2025-11-27 01:19:24,324 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 02:20:06] 2025-11-27 01:19:24,587 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 02:20:06] 2025-11-27 01:19:24,587 | INFO     | aborting loop
[2025-11-27 02:20:06] 2025-11-27 01:19:24,972 | INFO     | all data control threads have been joined
[2025-11-27 02:20:06] 2025-11-27 01:19:25,040 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 02:20:06] 2025-11-27 01:19:25,292 | INFO     | all job control threads have been joined
[2025-11-27 02:20:06] 2025-11-27 01:19:25,329 | INFO     | [job] retrieve thread has finished
[2025-11-27 02:20:06] 2025-11-27 01:19:25,330 | INFO     | [job] queue monitor thread has finished
[2025-11-27 02:20:06] 2025-11-27 01:19:25,593 | INFO     | [job] job monitor thread has finished
[2025-11-27 02:20:06] 2025-11-27 01:19:25,594 | INFO     | [data] copytool_in thread has finished
[2025-11-27 02:20:06] 2025-11-27 01:19:25,604 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 02:20:06] 2025-11-27 01:19:25,622 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 02:20:06] 2025-11-27 01:19:25,758 | INFO     | all payload control threads have been joined
[2025-11-27 02:20:06] 2025-11-27 01:19:25,978 | INFO     | [data] control thread has finished
[2025-11-27 02:20:06] 2025-11-27 01:19:26,200 | INFO     | [payload] failed_post thread has finished
[2025-11-27 02:20:06] 2025-11-27 01:19:26,298 | INFO     | [job] validate thread has finished
[2025-11-27 02:20:06] 2025-11-27 01:19:26,299 | INFO     | [job] control thread has finished
[2025-11-27 02:20:06] 2025-11-27 01:19:26,398 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 02:20:06] 2025-11-27 01:19:26,533 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 02:20:06] 2025-11-27 01:19:26,741 | INFO     | [payload] validate_post thread has finished
[2025-11-27 02:20:06] 2025-11-27 01:19:26,763 | INFO     | [payload] control thread has finished
[2025-11-27 02:20:06] 2025-11-27 01:19:27,045 | INFO     | [data] copytool_out thread has finished
[2025-11-27 02:20:06] 2025-11-27 01:19:29,628 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 02:20:06] 2025-11-27 01:19:34,476 | INFO     | job.realtimelogging is not enabled
[2025-11-27 02:20:06] 2025-11-27 01:19:35,481 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 02:20:06] 2025-11-27 01:19:54,423 | INFO     | PID=1868057 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 02:20:06] 2025-11-27 01:19:54,423 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 02:20:06] 2025-11-27 01:19:54,423 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 02:20:06] 2025-11-27 01:19:54,423 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 02:20:06] 2025-11-27 01:19:59,873 | INFO     | [monitor] cgroup control has ended
[2025-11-27 02:20:06] 2025-11-27 01:20:01,613 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140227475494720)>', '<ExcThread(monitor, started 140226697611008)>']
[2025-11-27 02:20:06] 2025-11-27 01:20:02,463 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 02:20:06] 2025-11-27 01:20:02,463 | INFO     | [monitor] control thread has ended
[2025-11-27 02:20:06] 2025-11-27 01:20:06,639 | INFO     | all workflow threads have been joined
[2025-11-27 02:20:06] 2025-11-27 01:20:06,639 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 02:20:06] 2025-11-27 01:20:06,640 | INFO     | traces error code: 0
[2025-11-27 02:20:06] 2025-11-27 01:20:06,640 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 02:20:06] 2025-11-27 01:20:06,721 [wrapper] ==== pilot stdout END ====
[2025-11-27 02:20:06] 2025-11-27 01:20:06,722 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 02:20:06] 2025-11-27 01:20:06,723 [wrapper] pilotpid: 1868057
[2025-11-27 02:20:06] 2025-11-27 01:20:06,724 [wrapper] Pilot exit status: 0
[2025-11-27 02:20:06] 2025-11-27 01:20:06,728 [wrapper] pandaids: 6896766785
[2025-11-27 02:20:06] 2025-11-27 01:20:06,737 [wrapper] cleanup supervisor_pilot 1902962 1868058
[2025-11-27 02:20:06] 2025-11-27 01:20:06,738 [wrapper] Test setup, not cleaning
[2025-11-27 02:20:06] 2025-11-27 01:20:06,739 [wrapper] apfmon messages muted
[2025-11-27 02:20:06] 2025-11-27 01:20:06,740 [wrapper] ==== wrapper stdout END ====
[2025-11-27 02:20:06] 2025-11-27 01:20:06,741 [wrapper] ==== wrapper stderr END ====
[2025-11-27 02:20:06]  *** Error codes and diagnostics ***
[2025-11-27 02:20:06]     "exeErrorCode": 0,
[2025-11-27 02:20:06]     "exeErrorDiag": "",
[2025-11-27 02:20:06]     "pilotErrorCode": 0,
[2025-11-27 02:20:06]     "pilotErrorDiag": "",
[2025-11-27 02:20:06]  *** Listing of results directory ***
[2025-11-27 02:20:06] total 1307116
[2025-11-27 02:20:06] -rw-r--r-- 1 boinc boinc    576529 Nov 25 10:44 pilot3.tar.gz
[2025-11-27 02:20:06] -rwx------ 1 boinc boinc     36292 Nov 25 11:06 runpilot2-wrapper.sh
[2025-11-27 02:20:06] -rw-r--r-- 1 boinc boinc      5112 Nov 25 11:06 queuedata.json
[2025-11-27 02:20:06] -rw-r--r-- 1 boinc boinc       100 Nov 26 21:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 02:20:06] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 21:37 run_atlas
[2025-11-27 02:20:06] -rw-r--r-- 1 boinc boinc       105 Nov 26 21:37 job.xml
[2025-11-27 02:20:06] -rw-r--r-- 2 boinc boinc     15847 Nov 26 21:37 start_atlas.sh
[2025-11-27 02:20:06] drwxrwx--x 2 boinc boinc        68 Nov 26 21:37 shared
[2025-11-27 02:20:06] -rw-r--r-- 2 boinc boinc    590101 Nov 26 21:37 input.tar.gz
[2025-11-27 02:20:06] -rw-r--r-- 1 boinc boinc      6551 Nov 26 21:37 init_data.xml
[2025-11-27 02:20:06] -rw-r--r-- 2 boinc boinc 411344083 Nov 26 21:37 EVNT.47483658._004280.pool.root.1
[2025-11-27 02:20:06] -rw-r--r-- 1 boinc boinc         0 Nov 26 21:37 boinc_lockfile
[2025-11-27 02:20:06] -rw-r--r-- 1 boinc boinc      2784 Nov 26 21:37 pandaJob.out
[2025-11-27 02:20:06] -rw------- 1 boinc boinc    991538 Nov 26 21:37 agis_schedconf.cvmfs.json
[2025-11-27 02:20:06] drwx------ 5 boinc boinc      4096 Nov 26 21:37 pilot3
[2025-11-27 02:20:06] -rw-r--r-- 1 boinc boinc       531 Nov 27 02:15 boinc_task_state.xml
[2025-11-27 02:20:06] -rw------- 1 boinc boinc 915718799 Nov 27 02:18 HITS.47556185._000439.pool.root.1
[2025-11-27 02:20:06] -rw------- 1 boinc boinc      1028 Nov 27 02:19 memory_monitor_summary.json
[2025-11-27 02:20:06] -rw------- 1 boinc boinc   1516240 Nov 27 02:19 agis_ddmendpoints.agis.ALL.json
[2025-11-27 02:20:06] -rw------- 1 boinc boinc   1362641 Nov 27 02:19 log.47556185._000439.job.log.tgz.1
[2025-11-27 02:20:06] -rw------- 1 boinc boinc      8602 Nov 27 02:19 heartbeat.json
[2025-11-27 02:20:06] -rw-r--r-- 1 boinc boinc      8192 Nov 27 02:19 boinc_mmap_file
[2025-11-27 02:20:06] -rw-r--r-- 1 boinc boinc        28 Nov 27 02:19 wrapper_checkpoint.txt
[2025-11-27 02:20:06] -rw------- 1 boinc boinc        95 Nov 27 02:19 pilot_heartbeat.json
[2025-11-27 02:20:06] -rw------- 1 boinc boinc      4821 Nov 27 02:20 pilotlog.txt
[2025-11-27 02:20:06] -rw------- 1 boinc boinc   2398176 Nov 27 02:20 log.47556185._000439.job.log.1
[2025-11-27 02:20:06] -rw------- 1 boinc boinc       353 Nov 27 02:20 output.list
[2025-11-27 02:20:06] -rw-r--r-- 1 boinc boinc       620 Nov 27 02:20 runtime_log
[2025-11-27 02:20:06] -rw------- 1 boinc boinc   3778560 Nov 27 02:20 result.tar.gz
[2025-11-27 02:20:06] -rw-r--r-- 1 boinc boinc      8831 Nov 27 02:20 runtime_log.err
[2025-11-27 02:20:06] -rw------- 1 boinc boinc       662 Nov 27 02:20 IGALDmP74h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm5JMKDmXNlOrm.diag
[2025-11-27 02:20:06] -rw-r--r-- 1 boinc boinc     21475 Nov 27 02:20 stderr.txt
[2025-11-27 02:20:06] HITS file was successfully produced:
[2025-11-27 02:20:06] -rw------- 1 boinc boinc 915718799 Nov 27 02:18 shared/HITS.pool.root.1
[2025-11-27 02:20:06]  *** Contents of shared directory: ***
[2025-11-27 02:20:06] total 1300252
[2025-11-27 02:20:06] -rw-r--r-- 2 boinc boinc     15847 Nov 26 21:37 start_atlas.sh
[2025-11-27 02:20:06] -rw-r--r-- 2 boinc boinc    590101 Nov 26 21:37 input.tar.gz
[2025-11-27 02:20:06] -rw-r--r-- 2 boinc boinc 411344083 Nov 26 21:37 ATLAS.root_0
[2025-11-27 02:20:06] -rw------- 1 boinc boinc 915718799 Nov 27 02:18 HITS.pool.root.1
[2025-11-27 02:20:06] -rw------- 1 boinc boinc   3778560 Nov 27 02:20 result.tar.gz
02:20:08 (1864356): run_atlas exited; CPU time 99116.266213
02:20:08 (1864356): called boinc_finish(0)

</stderr_txt>
]]>

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