Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:32:57 (13287): wrapper (7.7.26015): starting
00:32:57 (13287): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 00:32:57] Arguments: --nthreads 8
[2025-11-26 00:32:57] Threads: 8
[2025-11-26 00:32:57] Checking for CVMFS
[2025-11-26 00:32:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:32:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:32:58] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:32:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:32:58] 2.11.2.0 2783 81555 80100 153311 2 82 17643407 20275201 1 130560 0 26689541 99.897 4434418 30089 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 00:32:58] CVMFS is ok
[2025-11-26 00:32:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:32:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:32:58] Further information can be found at the LHC@home message board.
[2025-11-26 00:32:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:32:58] Checking for apptainer binary...
[2025-11-26 00:32:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:32:58] Running /usr/bin/apptainer --version
[2025-11-26 00:32:58] apptainer version 1.3.2-1.el7
[2025-11-26 00:32:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:32:59] c-204-38.aglt2.org
[2025-11-26 00:32:59] apptainer works
[2025-11-26 00:33:00] Set ATHENA_PROC_NUMBER=8
[2025-11-26 00:33:00] Set ATHENA_CORE_NUMBER=8
[2025-11-26 00:33:00] Starting ATLAS job with PandaID=6896765410
[2025-11-26 00:33:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 13:02:37]  *** The last 200 lines of the pilot log: ***
[2025-11-26 13:02:37] 2025-11-26 18:01:34,229 | INFO     | monitor loop #3306: job 0:6896765410 is in state 'finished'
[2025-11-26 13:02:37] 2025-11-26 18:01:34,230 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 13:02:37] 2025-11-26 18:01:34,767 | INFO     | time since job start (44897s) is within the limit (172800.0s)
[2025-11-26 13:02:37] 2025-11-26 18:01:35,497 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 13:02:37] 2025-11-26 18:01:35,500 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-11-26 13:02:37] 2025-11-26 18:01:35,503 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896765410/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 13:02:37] 2025-11-26 18:01:35,504 | INFO     | extracted standard info from prmon json
[2025-11-26 13:02:37] 2025-11-26 18:01:35,504 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 13:02:37] 2025-11-26 18:01:35,504 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 13:02:37] 2025-11-26 18:01:35,518 | INFO     | fitting pss+swap vs Time
[2025-11-26 13:02:37] 2025-11-26 18:01:35,519 | INFO     | sum of square deviations: 123626564023.14005
[2025-11-26 13:02:37] 2025-11-26 18:01:35,530 | INFO     | sum of deviations: 710547326164.1917
[2025-11-26 13:02:37] 2025-11-26 18:01:35,531 | INFO     | mean x: 1764157647.0502717
[2025-11-26 13:02:37] 2025-11-26 18:01:35,531 | INFO     | mean y: 2873132.2921195654
[2025-11-26 13:02:37] 2025-11-26 18:01:35,531 | INFO     | intersect: -10136675021.849354
[2025-11-26 13:02:37] 2025-11-26 18:01:35,532 | INFO     | chi2: 6.661953112558022
[2025-11-26 13:02:37] 2025-11-26 18:01:35,533 | INFO     | sum of square deviations: 121124203416.61574
[2025-11-26 13:02:37] 2025-11-26 18:01:35,544 | INFO     | sum of deviations: 977748976172.7092
[2025-11-26 13:02:37] 2025-11-26 18:01:35,544 | INFO     | mean x: 1764157494.5540357
[2025-11-26 13:02:37] 2025-11-26 18:01:35,544 | INFO     | mean y: 2889418.437756498
[2025-11-26 13:02:37] 2025-11-26 18:01:35,544 | INFO     | intersect: -14237890999.11997
[2025-11-26 13:02:37] 2025-11-26 18:01:35,545 | INFO     | chi2: 3.0259719700487375
[2025-11-26 13:02:37] 2025-11-26 18:01:35,545 | INFO     | current chi2=3.0259719700487375 (change=54.57830580727639 %)
[2025-11-26 13:02:37] 2025-11-26 18:01:35,546 | INFO     | sum of square deviations: 118655843447.5703
[2025-11-26 13:02:37] 2025-11-26 18:01:35,558 | INFO     | sum of deviations: 1072108080205.0234
[2025-11-26 13:02:37] 2025-11-26 18:01:35,558 | INFO     | mean x: 1764157342.0578513
[2025-11-26 13:02:37] 2025-11-26 18:01:35,558 | INFO     | mean y: 2895243.9517906336
[2025-11-26 13:02:37] 2025-11-26 18:01:35,558 | INFO     | intersect: -15937047418.956053
[2025-11-26 13:02:37] 2025-11-26 18:01:35,559 | INFO     | chi2: 2.442268197438238
[2025-11-26 13:02:37] 2025-11-26 18:01:35,559 | INFO     | current chi2=2.442268197438238 (change=19.28979443260005 %)
[2025-11-26 13:02:37] 2025-11-26 18:01:35,559 | INFO     | right removable region: 725
[2025-11-26 13:02:37] 2025-11-26 18:01:35,560 | INFO     | sum of square deviations: 121123956366.61586
[2025-11-26 13:02:37] 2025-11-26 18:01:35,573 | INFO     | sum of deviations: 510532786560.21387
[2025-11-26 13:02:37] 2025-11-26 18:01:35,573 | INFO     | mean x: 1764157799.5540357
[2025-11-26 13:02:37] 2025-11-26 18:01:35,573 | INFO     | mean y: 2885298.8932968536
[2025-11-26 13:02:37] 2025-11-26 18:01:35,573 | INFO     | intersect: -7432971523.783086
[2025-11-26 13:02:37] 2025-11-26 18:01:35,574 | INFO     | chi2: 4.388738685760355
[2025-11-26 13:02:37] 2025-11-26 18:01:35,574 | INFO     | current chi2=4.388738685760355 (change=34.12234202778425 %)
[2025-11-26 13:02:37] 2025-11-26 18:01:35,575 | INFO     | sum of square deviations: 118655438773.7962
[2025-11-26 13:02:37] 2025-11-26 18:01:35,586 | INFO     | sum of deviations: 468720267546.6013
[2025-11-26 13:02:37] 2025-11-26 18:01:35,587 | INFO     | mean x: 1764157952.0550964
[2025-11-26 13:02:37] 2025-11-26 18:01:35,587 | INFO     | mean y: 2887880.634986226
[2025-11-26 13:02:37] 2025-11-26 18:01:35,587 | INFO     | intersect: -6966001163.36508
[2025-11-26 13:02:37] 2025-11-26 18:01:35,588 | INFO     | chi2: 4.346180752244315
[2025-11-26 13:02:37] 2025-11-26 18:01:35,588 | INFO     | current chi2=4.346180752244315 (change=0.9697076213291738 %)
[2025-11-26 13:02:37] 2025-11-26 18:01:35,588 | INFO     | left removable region: 20
[2025-11-26 13:02:37] 2025-11-26 18:01:35,589 | INFO     | sum of square deviations: 108654001835.04964
[2025-11-26 13:02:37] 2025-11-26 18:01:35,599 | INFO     | sum of deviations: 774314922813.8438
[2025-11-26 13:02:37] 2025-11-26 18:01:35,600 | INFO     | mean x: 1764157921.567376
[2025-11-26 13:02:37] 2025-11-26 18:01:35,600 | INFO     | mean y: 2913590.445390071
[2025-11-26 13:02:37] 2025-11-26 18:01:35,600 | INFO     | intersect: -12569230847.857521
[2025-11-26 13:02:37] 2025-11-26 18:01:35,601 | INFO     | chi2: 0.0839815699802508
[2025-11-26 13:02:37] 2025-11-26 18:01:35,601 | INFO     | current memory leak: 7.13 B/s (using 705 data points, chi2=0.08)
[2025-11-26 13:02:37] 2025-11-26 18:01:35,601 | INFO     | could have reported an average CPU frequency of 2171 MHz (28 samples)
[2025-11-26 13:02:37] 2025-11-26 18:01:35,602 | INFO     | ..............................
[2025-11-26 13:02:37] 2025-11-26 18:01:35,602 | INFO     | . Timing measurements:
[2025-11-26 13:02:37] 2025-11-26 18:01:35,602 | INFO     | . get job = 0 s
[2025-11-26 13:02:37] 2025-11-26 18:01:35,602 | INFO     | . initial setup = 3 s
[2025-11-26 13:02:37] 2025-11-26 18:01:35,602 | INFO     | . payload setup = 8 s
[2025-11-26 13:02:37] 2025-11-26 18:01:35,602 | INFO     | . stage-in = 0 s
[2025-11-26 13:02:37] 2025-11-26 18:01:35,602 | INFO     | . payload execution = 44855 s
[2025-11-26 13:02:37] 2025-11-26 18:01:35,602 | INFO     | . stage-out = 4 s
[2025-11-26 13:02:37] 2025-11-26 18:01:35,602 | INFO     | . log creation = 0 s
[2025-11-26 13:02:37] 2025-11-26 18:01:35,603 | INFO     | ..............................
[2025-11-26 13:02:37] 2025-11-26 18:01:35,768 | INFO     | 
[2025-11-26 13:02:37] 2025-11-26 18:01:35,768 | INFO     | job summary report
[2025-11-26 13:02:37] 2025-11-26 18:01:35,769 | INFO     | --------------------------------------------------
[2025-11-26 13:02:37] 2025-11-26 18:01:35,769 | INFO     | PanDA job id: 6896765410
[2025-11-26 13:02:37] 2025-11-26 18:01:35,769 | INFO     | task id: 47556185
[2025-11-26 13:02:37] 2025-11-26 18:01:35,769 | INFO     | errors: (none)
[2025-11-26 13:02:37] 2025-11-26 18:01:35,769 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 13:02:37] 2025-11-26 18:01:35,770 | INFO     | pilot state: finished 
[2025-11-26 13:02:37] 2025-11-26 18:01:35,770 | INFO     | transexitcode: 0
[2025-11-26 13:02:37] 2025-11-26 18:01:35,770 | INFO     | exeerrorcode: 0
[2025-11-26 13:02:37] 2025-11-26 18:01:35,770 | INFO     | exeerrordiag: 
[2025-11-26 13:02:37] 2025-11-26 18:01:35,770 | INFO     | exitcode: 0
[2025-11-26 13:02:37] 2025-11-26 18:01:35,770 | INFO     | exitmsg: OK
[2025-11-26 13:02:37] 2025-11-26 18:01:35,771 | INFO     | cpuconsumptiontime: 347498 s
[2025-11-26 13:02:37] 2025-11-26 18:01:35,771 | INFO     | nevents: 1000
[2025-11-26 13:02:37] 2025-11-26 18:01:35,771 | INFO     | neventsw: 0
[2025-11-26 13:02:37] 2025-11-26 18:01:35,771 | INFO     | pid: 23465
[2025-11-26 13:02:37] 2025-11-26 18:01:35,771 | INFO     | pgrp: 23465
[2025-11-26 13:02:37] 2025-11-26 18:01:35,771 | INFO     | corecount: 8
[2025-11-26 13:02:37] 2025-11-26 18:01:35,772 | INFO     | event service: False
[2025-11-26 13:02:37] 2025-11-26 18:01:35,772 | INFO     | sizes: {0: 2284306, 1: 2284306, 6: 2284596, 11: 2284624, 44867: 2330518, 44872: 2339512, 44874: 2339696, 44881: 2339942}
[2025-11-26 13:02:37] 2025-11-26 18:01:35,772 | INFO     | --------------------------------------------------
[2025-11-26 13:02:37] 2025-11-26 18:01:35,772 | INFO     | 
[2025-11-26 13:02:37] 2025-11-26 18:01:35,772 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 13:02:37] 2025-11-26 18:01:35,802 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 13:02:37] 2025-11-26 18:01:35,803 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 13:02:37] 2025-11-26 18:01:35,803 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 13:02:37] 2025-11-26 18:01:35,803 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 13:02:37] 2025-11-26 18:01:35,803 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 13:02:37] 2025-11-26 18:01:35,804 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 13:02:37] 2025-11-26 18:01:35,804 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 13:02:37] 2025-11-26 18:01:35,804 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 13:02:37] 2025-11-26 18:01:35,804 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 13:02:37] 2025-11-26 18:01:35,804 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 13:02:37] 2025-11-26 18:01:35,804 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 13:02:37] 2025-11-26 18:01:35,805 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 13:02:37] 2025-11-26 18:01:35,805 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 13:02:37] 2025-11-26 18:01:35,805 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 13:02:37] 2025-11-26 18:01:35,805 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 13:02:37] 2025-11-26 18:01:35,805 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 13:02:37] 2025-11-26 18:01:35,806 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 13:02:37] 2025-11-26 18:01:35,806 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 13:02:37] 2025-11-26 18:01:35,806 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 13:02:37] 2025-11-26 18:01:35,806 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 13:02:37] 2025-11-26 18:01:35,806 | INFO     | job 6896765410 has completed (purged errors)
[2025-11-26 13:02:37] 2025-11-26 18:01:35,807 | INFO     | overall cleanup function is called
[2025-11-26 13:02:37] 2025-11-26 18:01:36,822 | INFO     | --- collectZombieJob: --- 10, [23465]
[2025-11-26 13:02:37] 2025-11-26 18:01:36,823 | INFO     | zombie collector waiting for pid 23465
[2025-11-26 13:02:37] 2025-11-26 18:01:36,823 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 13:02:37] 2025-11-26 18:01:36,823 | INFO     | collected zombie processes
[2025-11-26 13:02:37] 2025-11-26 18:01:36,823 | INFO     | will attempt to kill all subprocesses of pid=23465
[2025-11-26 13:02:37] 2025-11-26 18:01:36,913 | INFO     | process IDs to be killed: [23465] (in reverse order)
[2025-11-26 13:02:37] 2025-11-26 18:01:36,972 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 13:02:37] 2025-11-26 18:01:36,972 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 13:02:37] 2025-11-26 18:01:36,976 | INFO     | did not find any defunct processes belonging to 23465
[2025-11-26 13:02:37] 2025-11-26 18:01:36,979 | INFO     | did not find any defunct processes belonging to 23465
[2025-11-26 13:02:37] 2025-11-26 18:01:36,981 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 13:02:37] 2025-11-26 18:01:36,982 | INFO     | ready for new job
[2025-11-26 13:02:37] 2025-11-26 18:01:36,982 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 13:02:37] 2025-11-26 18:01:36,985 | INFO     | ***************************************
[2025-11-26 13:02:37] 2025-11-26 18:01:36,985 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 13:02:37] 2025-11-26 18:01:36,986 | INFO     | ***************************************
[2025-11-26 13:02:37] 2025-11-26 18:01:36,986 | INFO     | 
[2025-11-26 13:02:37] 2025-11-26 18:01:36,986 | INFO     | architecture information:
[2025-11-26 13:02:37] 2025-11-26 18:01:36,987 | INFO     | executing command: cat /etc/os-release
[2025-11-26 13:02:37] 2025-11-26 18:01:37,005 | INFO     | cat /etc/os-release:
[2025-11-26 13:02:37] NAME="CentOS Linux"
[2025-11-26 13:02:37] VERSION="7 (Core)"
[2025-11-26 13:02:37] ID="centos"
[2025-11-26 13:02:37] ID_LIKE="rhel fedora"
[2025-11-26 13:02:37] VERSION_ID="7"
[2025-11-26 13:02:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 13:02:37] ANSI_COLOR="0;31"
[2025-11-26 13:02:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 13:02:37] HOME_URL="https://www.centos.org/"
[2025-11-26 13:02:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 13:02:37] 
[2025-11-26 13:02:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 13:02:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 13:02:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 13:02:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 13:02:37] 
[2025-11-26 13:02:37] 2025-11-26 18:01:37,005 | INFO     | ***************************************
[2025-11-26 13:02:37] 2025-11-26 18:01:37,508 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 13:02:37] 2025-11-26 18:01:37,528 | INFO     | sufficient remaining disk space (17437818880 B)
[2025-11-26 13:02:37] 2025-11-26 18:01:37,528 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 13:02:37] 2025-11-26 18:01:37,529 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 13:02:37] 2025-11-26 18:01:37,529 | INFO     | update_server=False
[2025-11-26 13:02:37] 2025-11-26 18:01:37,529 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 13:02:37] 2025-11-26 18:01:37,529 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 13:02:37] 2025-11-26 18:01:37,738 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 13:02:37] 2025-11-26 18:01:37,739 | INFO     | aborting loop
[2025-11-26 13:02:37] 2025-11-26 18:01:37,805 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 13:02:37] 2025-11-26 18:01:38,020 | INFO     | all data control threads have been joined
[2025-11-26 13:02:37] 2025-11-26 18:01:38,344 | INFO     | all job control threads have been joined
[2025-11-26 13:02:37] 2025-11-26 18:01:38,535 | INFO     | [job] retrieve thread has finished
[2025-11-26 13:02:37] 2025-11-26 18:01:38,535 | INFO     | [job] queue monitor thread has finished
[2025-11-26 13:02:37] 2025-11-26 18:01:38,593 | INFO     | [data] copytool_in thread has finished
[2025-11-26 13:02:37] 2025-11-26 18:01:38,744 | INFO     | [job] job monitor thread has finished
[2025-11-26 13:02:37] 2025-11-26 18:01:38,852 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 13:02:37] 2025-11-26 18:01:38,900 | INFO     | [job] validate thread has finished
[2025-11-26 13:02:37] 2025-11-26 18:01:38,968 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 13:02:37] 2025-11-26 18:01:39,021 | INFO     | all payload control threads have been joined
[2025-11-26 13:02:37] 2025-11-26 18:01:39,022 | INFO     | [data] control thread has finished
[2025-11-26 13:02:37] 2025-11-26 18:01:39,175 | INFO     | [payload] validate_post thread has finished
[2025-11-26 13:02:37] 2025-11-26 18:01:39,277 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 13:02:37] 2025-11-26 18:01:39,350 | INFO     | [job] control thread has finished
[2025-11-26 13:02:37] 2025-11-26 18:01:39,383 | INFO     | [payload] failed_post thread has finished
[2025-11-26 13:02:37] 2025-11-26 18:01:39,580 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 13:02:37] 2025-11-26 18:01:39,811 | INFO     | [data] copytool_out thread has finished
[2025-11-26 13:02:37] 2025-11-26 18:01:40,026 | INFO     | [payload] control thread has finished
[2025-11-26 13:02:37] 2025-11-26 18:01:42,974 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 13:02:37] 2025-11-26 18:01:48,278 | INFO     | job.realtimelogging is not enabled
[2025-11-26 13:02:37] 2025-11-26 18:01:49,284 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 13:02:37] 2025-11-26 18:02:07,982 | INFO     | PID=17088 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 13:02:37] 2025-11-26 18:02:07,982 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 13:02:37] 2025-11-26 18:02:07,982 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 13:02:37] 2025-11-26 18:02:07,982 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 13:02:37] 2025-11-26 18:02:31,810 | INFO     | [monitor] cgroup control has ended
[2025-11-26 13:02:37] 2025-11-26 18:02:31,954 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140217372829504)>', '<ExcThread(monitor, started 140216538994432)>']
[2025-11-26 13:02:37] 2025-11-26 18:02:32,084 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 13:02:37] 2025-11-26 18:02:32,084 | INFO     | [monitor] control thread has ended
[2025-11-26 13:02:37] 2025-11-26 18:02:36,980 | INFO     | all workflow threads have been joined
[2025-11-26 13:02:37] 2025-11-26 18:02:36,980 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 13:02:37] 2025-11-26 18:02:36,981 | INFO     | traces error code: 0
[2025-11-26 13:02:37] 2025-11-26 18:02:36,984 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 13:02:37] 2025-11-26 18:02:37,120 [wrapper] ==== pilot stdout END ====
[2025-11-26 13:02:37] 2025-11-26 18:02:37,126 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 13:02:37] 2025-11-26 18:02:37,130 [wrapper] pilotpid: 17088
[2025-11-26 13:02:37] 2025-11-26 18:02:37,135 [wrapper] Pilot exit status: 0
[2025-11-26 13:02:37] 2025-11-26 18:02:37,152 [wrapper] pandaids: 6896765410
[2025-11-26 13:02:37] 2025-11-26 18:02:37,208 [wrapper] cleanup supervisor_pilot 15663 17089
[2025-11-26 13:02:37] 2025-11-26 18:02:37,212 [wrapper] Test setup, not cleaning
[2025-11-26 13:02:37] 2025-11-26 18:02:37,218 [wrapper] apfmon messages muted
[2025-11-26 13:02:37] 2025-11-26 18:02:37,223 [wrapper] ==== wrapper stdout END ====
[2025-11-26 13:02:37] 2025-11-26 18:02:37,228 [wrapper] ==== wrapper stderr END ====
[2025-11-26 13:02:37]  *** Error codes and diagnostics ***
[2025-11-26 13:02:37]     "exeErrorCode": 0,
[2025-11-26 13:02:37]     "exeErrorDiag": "",
[2025-11-26 13:02:37]     "pilotErrorCode": 0,
[2025-11-26 13:02:37]     "pilotErrorDiag": "",
[2025-11-26 13:02:37]  *** Listing of results directory ***
[2025-11-26 13:02:37] total 1314968
[2025-11-26 13:02:37] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 03:55 pilot3.tar.gz
[2025-11-26 13:02:37] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 04:08 queuedata.json
[2025-11-26 13:02:37] -rwx------ 1 boincer umatlas     36292 Nov 25 04:09 runpilot2-wrapper.sh
[2025-11-26 13:02:37] -rw-r--r-- 1 boincer umatlas       100 Nov 26 00:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 13:02:37] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 00:32 run_atlas
[2025-11-26 13:02:37] -rw-r--r-- 1 boincer umatlas       105 Nov 26 00:32 job.xml
[2025-11-26 13:02:37] -rw-r--r-- 2 boincer umatlas 409171285 Nov 26 00:32 EVNT.47483658._004264.pool.root.1
[2025-11-26 13:02:37] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 00:32 start_atlas.sh
[2025-11-26 13:02:37] drwxrwx--x 2 boincer umatlas      4096 Nov 26 00:32 shared
[2025-11-26 13:02:37] -rw-r--r-- 2 boincer umatlas    590108 Nov 26 00:32 input.tar.gz
[2025-11-26 13:02:37] -rw-r--r-- 1 boincer umatlas         0 Nov 26 00:32 boinc_lockfile
[2025-11-26 13:02:37] -rw-r--r-- 1 boincer umatlas      2781 Nov 26 00:32 pandaJob.out
[2025-11-26 13:02:37] -rw------- 1 boincer umatlas        57 Nov 26 00:33 setup.sh.local
[2025-11-26 13:02:37] -rw------- 1 boincer umatlas    991877 Nov 26 00:33 agis_schedconf.cvmfs.json
[2025-11-26 13:02:37] drwx------ 5 boincer umatlas      4096 Nov 26 00:33 pilot3
[2025-11-26 13:02:37] -rw-r--r-- 1 boincer umatlas       533 Nov 26 12:50 boinc_task_state.xml
[2025-11-26 13:02:37] -rw------- 1 boincer umatlas 917108483 Nov 26 13:00 HITS.47556185._000271.pool.root.1
[2025-11-26 13:02:37] -rw-r--r-- 1 boincer umatlas      5913 Nov 26 13:01 init_data.xml
[2025-11-26 13:02:37] -rw------- 1 boincer umatlas      1064 Nov 26 13:01 memory_monitor_summary.json
[2025-11-26 13:02:37] -rw------- 1 boincer umatlas        95 Nov 26 13:01 pilot_heartbeat.json
[2025-11-26 13:02:37] -rw------- 1 boincer umatlas   1516240 Nov 26 13:01 agis_ddmendpoints.agis.ALL.json
[2025-11-26 13:02:37] -rw------- 1 boincer umatlas   1980956 Nov 26 13:01 log.47556185._000271.job.log.tgz.1
[2025-11-26 13:02:37] -rw------- 1 boincer umatlas      8651 Nov 26 13:01 heartbeat.json
[2025-11-26 13:02:37] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 13:02 boinc_mmap_file
[2025-11-26 13:02:37] -rw-r--r-- 1 boincer umatlas        29 Nov 26 13:02 wrapper_checkpoint.txt
[2025-11-26 13:02:37] -rw------- 1 boincer umatlas      4818 Nov 26 13:02 pilotlog.txt
[2025-11-26 13:02:37] -rw------- 1 boincer umatlas   6182818 Nov 26 13:02 log.47556185._000271.job.log.1
[2025-11-26 13:02:37] -rw------- 1 boincer umatlas       353 Nov 26 13:02 output.list
[2025-11-26 13:02:37] -rw-r--r-- 1 boincer umatlas       620 Nov 26 13:02 runtime_log
[2025-11-26 13:02:37] -rw------- 1 boincer umatlas   8181760 Nov 26 13:02 result.tar.gz
[2025-11-26 13:02:37] -rw-r--r-- 1 boincer umatlas      9343 Nov 26 13:02 runtime_log.err
[2025-11-26 13:02:37] -rw------- 1 boincer umatlas       668 Nov 26 13:02 llMMDm9D4h8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmAPJKDmVwWhlm.diag
[2025-11-26 13:02:37] -rw-r--r-- 1 boincer umatlas     21285 Nov 26 13:02 stderr.txt
[2025-11-26 13:02:37] HITS file was successfully produced:
[2025-11-26 13:02:37] -rw------- 1 boincer umatlas 917108483 Nov 26 13:00 shared/HITS.pool.root.1
[2025-11-26 13:02:37]  *** Contents of shared directory: ***
[2025-11-26 13:02:37] total 1303792
[2025-11-26 13:02:37] -rw-r--r-- 2 boincer umatlas 409171285 Nov 26 00:32 ATLAS.root_0
[2025-11-26 13:02:37] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 00:32 start_atlas.sh
[2025-11-26 13:02:37] -rw-r--r-- 2 boincer umatlas    590108 Nov 26 00:32 input.tar.gz
[2025-11-26 13:02:37] -rw------- 1 boincer umatlas 917108483 Nov 26 13:00 HITS.pool.root.1
[2025-11-26 13:02:37] -rw------- 1 boincer umatlas   8181760 Nov 26 13:02 result.tar.gz
13:02:38 (13287): run_atlas exited; CPU time 343825.746780
13:02:38 (13287): called boinc_finish(0)

</stderr_txt>
]]>

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