Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-25 19:15:33 (40480): vboxwrapper version 26210
2025-11-25 19:15:33 (40480): BOINC client version: 8.2.4
2025-11-25 19:15:34 (40480): Detected: VirtualBox VboxManage Interface (Version: 7.0.14)
2025-11-25 19:15:34 (40480): Successfully copied 'init_data.xml' to the shared directory.
2025-11-25 19:15:34 (40480): Create VM. (boinc_8baca0c342cdf522, slot#8)
2025-11-25 19:15:35 (40480): Setting Memory Size for VM. (4200MB)
2025-11-25 19:15:35 (40480): Setting CPU Count for VM. (2)
2025-11-25 19:15:36 (40480): Setting Chipset Options for VM.
2025-11-25 19:15:36 (40480): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-25 19:15:36 (40480): Setting Boot Options for VM.
2025-11-25 19:15:37 (40480): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-25 19:15:37 (40480): Enabling VM Network Access.
2025-11-25 19:15:37 (40480): Disabling USB Support for VM.
2025-11-25 19:15:37 (40480): Disabling COM Port Support for VM.
2025-11-25 19:15:38 (40480): Disabling LPT Port Support for VM.
2025-11-25 19:15:38 (40480): Disabling Audio Support for VM.
2025-11-25 19:15:38 (40480): Disabling Clipboard Support for VM.
2025-11-25 19:15:38 (40480): Disabling Drag and Drop Support for VM.
2025-11-25 19:15:39 (40480): Adding storage controller(s) to VM.
2025-11-25 19:15:39 (40480): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-25 19:15:41 (40480): Adding VirtualBox Guest Additions to VM.
2025-11-25 19:15:41 (40480): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-25 19:15:42 (40480): forwarding host port 36366 to guest port 80
2025-11-25 19:15:42 (40480): Enabling remote desktop for VM.
2025-11-25 19:15:42 (40480): Enabling shared directory for VM.
2025-11-25 19:15:43 (40480): Starting VM using VBoxManage interface. (boinc_8baca0c342cdf522, slot#8)
2025-11-25 19:15:49 (40480): Successfully started VM. (PID = '31748')
2025-11-25 19:15:49 (40480): Reporting VM Process ID to BOINC.
2025-11-25 19:15:49 (40480): Guest Log: BIOS: VirtualBox 7.0.14
2025-11-25 19:15:49 (40480): Guest Log: CPUID EDX: 0x178bfbff
2025-11-25 19:15:49 (40480): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-25 19:15:49 (40480): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-25 19:15:49 (40480): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-25 19:15:49 (40480): Detected: Web Application Enabled (http://localhost:36366)
2025-11-25 19:15:49 (40480): Detected: Remote Desktop Enabled (localhost:36370)
2025-11-25 19:15:49 (40480): Preference change detected
2025-11-25 19:15:49 (40480): Setting CPU throttle for VM. (100%)
2025-11-25 19:15:50 (40480): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 90 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-25 19:15:51 (40480): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-25 19:15:51 (40480): Guest Log: BIOS: Booting from Hard Disk...
2025-11-25 19:15:54 (40480): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-25 19:15:54 (40480): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-25 19:15:54 (40480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-25 19:15:54 (40480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-25 19:15:54 (40480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-25 19:15:54 (40480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-25 19:15:54 (40480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-25 19:15:54 (40480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-25 19:15:54 (40480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-25 19:15:54 (40480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-25 19:15:54 (40480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-25 19:15:54 (40480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-25 19:15:54 (40480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-25 19:15:54 (40480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-25 19:15:54 (40480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-25 19:15:54 (40480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-25 19:15:54 (40480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-25 19:15:54 (40480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-25 19:15:54 (40480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-25 19:15:54 (40480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-25 19:15:54 (40480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-25 19:15:54 (40480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-25 19:15:54 (40480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-25 19:15:54 (40480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-25 19:15:54 (40480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-25 19:15:54 (40480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-25 19:15:54 (40480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-25 19:15:54 (40480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-25 19:15:54 (40480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-25 19:15:54 (40480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-25 19:15:54 (40480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-25 19:15:54 (40480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-25 19:15:57 (40480): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-25 19:15:57 (40480): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-25 19:16:02 (40480): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-25 19:16:02 (40480): Guest Log: 00:00:00.000150 main     Log opened 2025-11-26T03:16:00.606126000Z
2025-11-25 19:16:02 (40480): Guest Log: 00:00:00.000256 main     OS Product: Linux
2025-11-25 19:16:02 (40480): Guest Log: 00:00:00.000285 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-25 19:16:02 (40480): Guest Log: 00:00:00.000306 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-25 19:16:02 (40480): Guest Log: 00:00:00.000324 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-25 19:16:02 (40480): Guest Log: 00:00:00.000325 main     Process ID: 1266
2025-11-25 19:16:02 (40480): Guest Log: 00:00:00.000325 main     Package type: LINUX_64BITS_GENERIC
2025-11-25 19:16:02 (40480): Guest Log: 00:00:00.001547 main     5.2.32 r132073 started. Verbose level = 0
2025-11-25 19:16:02 (40480): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-25 19:16:02 (40480): Guest Log: [INFO] Mounting shared directory
2025-11-25 19:16:02 (40480): Guest Log: [INFO] Checking for init_data.xml
2025-11-25 19:16:05 (40480): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-25 19:16:05 (40480): Guest Log: [INFO] Detected branch: prod
2025-11-25 19:16:05 (40480): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-25 19:16:05 (40480): Guest Log: Copying input files
2025-11-25 19:16:07 (40480): Guest Log: Copied input files into RunAtlas.
2025-11-25 19:16:07 (40480): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-25 19:16:07 (40480): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-25 19:16:07 (40480): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-25 19:16:07 (40480): Guest Log: Further information can be found at the LHC@home message board.
2025-11-25 19:16:37 (40480): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-25 19:16:37 (40480): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-25 19:16:37 (40480): Guest Log: 2.6.3.0 1555 0 32172 153306 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-11-25 19:16:38 (40480): Guest Log: copied the webapp to /var/www
2025-11-25 19:16:38 (40480): Guest Log: ATHENA_PROC_NUMBER=2
2025-11-25 19:16:38 (40480): Guest Log: ATHENA_CORE_NUMBER=2
2025-11-25 19:16:38 (40480): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-25 19:16:38 (40480): Guest Log:  *** Starting ATLAS job. (PandaID=6897488219 taskID=47556161) ***
2025-11-25 20:55:53 (40480): Status Report: Elapsed Time: '6000.000000'
2025-11-25 20:55:53 (40480): Status Report: CPU Time: '11356.109375'
2025-11-25 22:35:56 (40480): Status Report: Elapsed Time: '12000.000000'
2025-11-25 22:35:56 (40480): Status Report: CPU Time: '23319.000000'
2025-11-26 00:15:59 (40480): Status Report: Elapsed Time: '18000.000000'
2025-11-26 00:15:59 (40480): Status Report: CPU Time: '35283.937500'
2025-11-26 01:56:02 (40480): Status Report: Elapsed Time: '24000.000000'
2025-11-26 01:56:02 (40480): Status Report: CPU Time: '47251.953125'
2025-11-26 03:36:05 (40480): Status Report: Elapsed Time: '30000.000000'
2025-11-26 03:36:05 (40480): Status Report: CPU Time: '59215.343750'
2025-11-26 05:16:15 (40480): Status Report: Elapsed Time: '36000.000000'
2025-11-26 05:16:15 (40480): Status Report: CPU Time: '71196.562500'
2025-11-26 06:56:18 (40480): Status Report: Elapsed Time: '42000.000000'
2025-11-26 06:56:18 (40480): Status Report: CPU Time: '83163.843750'
2025-11-26 08:36:21 (40480): Status Report: Elapsed Time: '48000.000000'
2025-11-26 08:36:21 (40480): Status Report: CPU Time: '95127.734375'
2025-11-26 10:16:23 (40480): Status Report: Elapsed Time: '54000.000000'
2025-11-26 10:16:23 (40480): Status Report: CPU Time: '107094.671875'
2025-11-26 10:42:25 (40480): Guest Log:  *** Job finished ***
2025-11-26 10:42:25 (40480): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-26 10:42:25 (40480): Guest Log: 2025-11-26 18:41:49,660 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-26 10:42:25 (40480): Guest Log: 2025-11-26 18:41:49,660 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-26 10:42:25 (40480): Guest Log: 2025-11-26 18:42:17,133 | INFO     | [monitor] cgroup control has ended
2025-11-26 10:42:25 (40480): Guest Log: 2025-11-26 18:42:18,752 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140356858984256)>', '<ExcThread(monitor, started 140356276434688)>']
2025-11-26 10:42:25 (40480): Guest Log: 2025-11-26 18:42:18,784 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-26 10:42:25 (40480): Guest Log: 2025-11-26 18:42:18,784 | INFO     | [monitor] control thread has ended
2025-11-26 10:42:25 (40480): Guest Log: 2025-11-26 18:42:23,892 | INFO     | all workflow threads have been joined
2025-11-26 10:42:25 (40480): Guest Log: 2025-11-26 18:42:23,892 | INFO     | end of generic workflow (traces error code: 0)
2025-11-26 10:42:25 (40480): Guest Log: 2025-11-26 18:42:23,892 | INFO     | traces error code: 0
2025-11-26 10:42:25 (40480): Guest Log: 2025-11-26 18:42:23,892 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-26 10:42:25 (40480): Guest Log: 2025-11-26 18:42:23,950 [wrapper] ==== pilot stdout END ====
2025-11-26 10:42:25 (40480): Guest Log: 2025-11-26 18:42:23,955 [wrapper] ==== wrapper stdout RESUME ====
2025-11-26 10:42:25 (40480): Guest Log: 2025-11-26 18:42:23,959 [wrapper] pilotpid: 5930
2025-11-26 10:42:25 (40480): Guest Log: 2025-11-26 18:42:23,962 [wrapper] Pilot exit status: 0
2025-11-26 10:42:25 (40480): Guest Log: 2025-11-26 18:42:23,975 [wrapper] pandaids: 6897488219
2025-11-26 10:42:25 (40480): Guest Log: 2025-11-26 18:42:23,997 [wrapper] cleanup supervisor_pilot 21013 5931
2025-11-26 10:42:25 (40480): Guest Log: 2025-11-26 18:42:24,000 [wrapper] Test setup, not cleaning
2025-11-26 10:42:25 (40480): Guest Log: 2025-11-26 18:42:24,003 [wrapper] apfmon messages muted
2025-11-26 10:42:25 (40480): Guest Log: 2025-11-26 18:42:24,006 [wrapper] ==== wrapper stdout END ====
2025-11-26 10:42:25 (40480): Guest Log: 2025-11-26 18:42:24,010 [wrapper] ==== wrapper stderr END ====
2025-11-26 10:42:25 (40480): Guest Log:  *** Error codes and diagnostics ***
2025-11-26 10:42:25 (40480): Guest Log:     "exeErrorCode": 0,
2025-11-26 10:42:25 (40480): Guest Log:     "exeErrorDiag": "",
2025-11-26 10:42:25 (40480): Guest Log:     "pilotErrorCode": 0,
2025-11-26 10:42:25 (40480): Guest Log:     "pilotErrorDiag": "",
2025-11-26 10:42:25 (40480): Guest Log:  *** Listing of results directory ***
2025-11-26 10:42:25 (40480): Guest Log: total 917320
2025-11-26 10:42:25 (40480): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 25 16:48 pilot3.tar.gz
2025-11-26 10:42:25 (40480): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 25 16:55 queuedata.json
2025-11-26 10:42:25 (40480): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 25 16:57 runpilot2-wrapper.sh
2025-11-26 10:42:25 (40480): Guest Log: -rwxr-xr-x. 1 atlas atlas      8864 Nov 26 03:16 init_data.xml
2025-11-26 10:42:25 (40480): Guest Log: -rwxr-xr-x. 1 atlas atlas    590110 Nov 26 03:16 input.tar.gz
2025-11-26 10:42:25 (40480): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Nov 26 03:16 start_atlas.sh
2025-11-26 10:42:25 (40480): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 26 03:16 EVNT.47483658._002264.pool.root.1 -> /data/./ATLAS.root_0
2025-11-26 10:42:25 (40480): Guest Log: -rw-r--r--. 1 atlas atlas      2786 Nov 26 03:16 pandaJob.out
2025-11-26 10:42:25 (40480): Guest Log: -rw-------. 1 atlas atlas    991877 Nov 26 03:17 agis_schedconf.cvmfs.json
2025-11-26 10:42:25 (40480): Guest Log: drwx------. 5 atlas atlas      4096 Nov 26 03:17 pilot3
2025-11-26 10:42:25 (40480): Guest Log: -rw-------. 1 atlas atlas 917520730 Nov 26 18:40 HITS.47556161._002480.pool.root.1
2025-11-26 10:42:25 (40480): Guest Log: -rw-------. 1 atlas atlas      1041 Nov 26 18:41 memory_monitor_summary.json
2025-11-26 10:42:25 (40480): Guest Log: -rw-------. 1 atlas atlas   1516240 Nov 26 18:41 agis_ddmendpoints.agis.ALL.json
2025-11-26 10:42:25 (40480): Guest Log: -rw-------. 1 atlas atlas   1366998 Nov 26 18:41 log.47556161._002480.job.log.tgz.1
2025-11-26 10:42:25 (40480): Guest Log: -rw-------. 1 atlas atlas      8660 Nov 26 18:41 heartbeat.json
2025-11-26 10:42:25 (40480): Guest Log: -rw-------. 1 atlas atlas        95 Nov 26 18:41 pilot_heartbeat.json
2025-11-26 10:42:25 (40480): Guest Log: -rw-------. 1 atlas atlas      5063 Nov 26 18:42 pilotlog.txt
2025-11-26 10:42:25 (40480): Guest Log: -rw-------. 1 atlas atlas   7616817 Nov 26 18:42 log.47556161._002480.job.log.1
2025-11-26 10:42:25 (40480): Guest Log: -rw-------. 1 atlas atlas       353 Nov 26 18:42 output.list
2025-11-26 10:42:25 (40480): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 26 18:42 runtime_log
2025-11-26 10:42:25 (40480): Guest Log: -rw-------. 1 atlas atlas   9000960 Nov 26 18:42 result.tar.gz
2025-11-26 10:42:25 (40480): Guest Log: -rw-r--r--. 1 atlas atlas      8738 Nov 26 18:42 runtime_log.err
2025-11-26 10:42:25 (40480): Guest Log: -rw-------. 1 atlas atlas       658 Nov 26 18:42 8XrMDmMXBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxXMKDmGH6FGo.diag
2025-11-26 10:42:25 (40480): Guest Log: Looking for outputfile HITS.47556161._002480.pool.root.1
2025-11-26 10:42:25 (40480): Guest Log: HITS file was successfully produced
2025-11-26 10:42:25 (40480): Guest Log: -rw-------. 1 atlas atlas 917520730 Nov 26 18:40 /home/atlas/RunAtlas/HITS.47556161._002480.pool.root.1
2025-11-26 10:42:28 (40480): Guest Log: Successfully finished the ATLAS job!
2025-11-26 10:42:28 (40480): Guest Log: Copying the results back to the shared directory!
2025-11-26 10:42:28 (40480): Guest Log:  *** Contents of shared directory: ***
2025-11-26 10:42:28 (40480): Guest Log: total 1303468
2025-11-26 10:42:28 (40480): Guest Log: -rwxrwxrwx. 1 root root 407598242 Nov 26 03:15 ATLAS.root_0
2025-11-26 10:42:28 (40480): Guest Log: -rwxrwxrwx. 1 root root 917520730 Nov 26 18:42 HITS.pool.root.1
2025-11-26 10:42:28 (40480): Guest Log: -rwxrwxrwx. 1 root root      8864 Nov 26 03:15 init_data.xml
2025-11-26 10:42:28 (40480): Guest Log: -rwxrwxrwx. 1 root root    590110 Nov 26 03:14 input.tar.gz
2025-11-26 10:42:28 (40480): Guest Log: -rwxrwxrwx. 1 root root   9000960 Nov 26 18:42 result.tar.gz
2025-11-26 10:42:28 (40480): Guest Log: -rwxrwxrwx. 1 root root     15847 Nov 26 03:14 start_atlas.sh
2025-11-26 10:42:28 (40480): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-26 10:42:28 (40480): VM Completion File Detected.
2025-11-26 10:42:28 (40480): Powering off VM.
2025-11-26 10:42:29 (40480): Successfully stopped VM.
2025-11-26 10:42:29 (40480): Deregistering VM. (boinc_8baca0c342cdf522, slot#8)
2025-11-26 10:42:29 (40480): Removing network bandwidth throttle group from VM.
2025-11-26 10:42:29 (40480): Removing VM from VirtualBox.
2025-11-26 10:42:34 (40480): called boinc_finish(0)

</stderr_txt>
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