Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:52:35 (1821176): wrapper (7.7.26015): starting
16:52:35 (1821176): wrapper: running run_atlas (--nthreads 6)
[2025-11-26 16:52:35] Arguments: --nthreads 6
[2025-11-26 16:52:35] Threads: 6
[2025-11-26 16:52:35] Checking for CVMFS
[2025-11-26 16:52:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 16:52:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 16:52:35] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 16:52:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 16:52:35] 2.13.3.0 1581104 1690 71640 153326 0 81 21920467 81920000 0 130560 0 853514 99.982 67538 1260 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-11-26 16:52:35] CVMFS is ok
[2025-11-26 16:52:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 16:52:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 16:52:35] Further information can be found at the LHC@home message board.
[2025-11-26 16:52:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 16:52:35] Checking for apptainer binary...
[2025-11-26 16:52:35] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/var/lib/snapd/snap/bin)
[2025-11-26 16:52:35] apptainer is not installed, using version from CVMFS
[2025-11-26 16:52:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 16:52:35] monitor-atlas.iep
[2025-11-26 16:52:35] apptainer works
[2025-11-26 16:52:35] Set ATHENA_PROC_NUMBER=6
[2025-11-26 16:52:35] Set ATHENA_CORE_NUMBER=6
[2025-11-26 16:52:35] Starting ATLAS job with PandaID=6896713651
[2025-11-26 16:52:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 21:37:18]  *** The last 200 lines of the pilot log: ***
[2025-11-26 21:37:18] 2025-11-26 20:36:40,564 | INFO     | monitor loop #1287: job 0:6896713651 is in state 'finished'
[2025-11-26 21:37:18] 2025-11-26 20:36:40,565 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 21:37:18] 2025-11-26 20:36:41,293 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 21:37:18] 2025-11-26 20:36:41,294 | INFO     | found 6 cores (6 cores per socket, 1 socket) , CPU MHz: 4353.451999999999
[2025-11-26 21:37:18] 2025-11-26 20:36:41,294 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6896713651/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 21:37:18] 2025-11-26 20:36:41,295 | INFO     | extracted standard info from prmon json
[2025-11-26 21:37:18] 2025-11-26 20:36:41,295 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 21:37:18] 2025-11-26 20:36:41,295 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 21:37:18] 2025-11-26 20:36:41,297 | INFO     | fitting pss+swap vs Time
[2025-11-26 21:37:18] 2025-11-26 20:36:41,297 | INFO     | sum of square deviations: 6734191380.0
[2025-11-26 21:37:18] 2025-11-26 20:36:41,298 | INFO     | sum of deviations: 90952067317.0
[2025-11-26 21:37:18] 2025-11-26 20:36:41,298 | INFO     | mean x: 1764180865.0
[2025-11-26 21:37:18] 2025-11-26 20:36:41,298 | INFO     | mean y: 2730026.5627240143
[2025-11-26 21:37:18] 2025-11-26 20:36:41,298 | INFO     | intersect: -23824317311.204395
[2025-11-26 21:37:18] 2025-11-26 20:36:41,298 | INFO     | chi2: 2.698140814000976
[2025-11-26 21:37:18] 2025-11-26 20:36:41,298 | INFO     | sum of square deviations: 6378584712.5
[2025-11-26 21:37:18] 2025-11-26 20:36:41,299 | INFO     | sum of deviations: 135277472066.5
[2025-11-26 21:37:18] 2025-11-26 20:36:41,299 | INFO     | mean x: 1764180712.5
[2025-11-26 21:37:18] 2025-11-26 20:36:41,299 | INFO     | mean y: 2748891.937956204
[2025-11-26 21:37:18] 2025-11-26 20:36:41,299 | INFO     | intersect: -37412119423.25287
[2025-11-26 21:37:18] 2025-11-26 20:36:41,299 | INFO     | chi2: 1.4182608401897574
[2025-11-26 21:37:18] 2025-11-26 20:36:41,299 | INFO     | current chi2=1.4182608401897574 (change=47.435625567419166 %)
[2025-11-26 21:37:18] 2025-11-26 20:36:41,299 | INFO     | sum of square deviations: 6035722470.0
[2025-11-26 21:37:18] 2025-11-26 20:36:41,300 | INFO     | sum of deviations: 130381682674.0
[2025-11-26 21:37:18] 2025-11-26 20:36:41,300 | INFO     | mean x: 1764180560.0
[2025-11-26 21:37:18] 2025-11-26 20:36:41,300 | INFO     | mean y: 2746714.8364312267
[2025-11-26 21:37:18] 2025-11-26 20:36:41,300 | INFO     | intersect: -38106498880.34078
[2025-11-26 21:37:18] 2025-11-26 20:36:41,300 | INFO     | chi2: 1.4180227756816826
[2025-11-26 21:37:18] 2025-11-26 20:36:41,300 | INFO     | current chi2=1.4180227756816826 (change=0.016785664620267607 %)
[2025-11-26 21:37:18] 2025-11-26 20:36:41,300 | INFO     | right removable region: 268
[2025-11-26 21:37:18] 2025-11-26 20:36:41,301 | INFO     | sum of square deviations: 6378584712.5
[2025-11-26 21:37:18] 2025-11-26 20:36:41,301 | INFO     | sum of deviations: 45971697363.000015
[2025-11-26 21:37:18] 2025-11-26 20:36:41,301 | INFO     | mean x: 1764181017.5
[2025-11-26 21:37:18] 2025-11-26 20:36:41,301 | INFO     | mean y: 2749151.605839416
[2025-11-26 21:37:18] 2025-11-26 20:36:41,301 | INFO     | intersect: -12712045663.476652
[2025-11-26 21:37:18] 2025-11-26 20:36:41,301 | INFO     | chi2: 1.3396308020007464
[2025-11-26 21:37:18] 2025-11-26 20:36:41,302 | INFO     | current chi2=1.3396308020007464 (change=50.34985590636183 %)
[2025-11-26 21:37:18] 2025-11-26 20:36:41,302 | INFO     | sum of square deviations: 6035722470.0
[2025-11-26 21:37:18] 2025-11-26 20:36:41,302 | INFO     | sum of deviations: 39501152924.00001
[2025-11-26 21:37:18] 2025-11-26 20:36:41,302 | INFO     | mean x: 1764181170.0
[2025-11-26 21:37:18] 2025-11-26 20:36:41,302 | INFO     | mean y: 2752024.817843866
[2025-11-26 21:37:18] 2025-11-26 20:36:41,303 | INFO     | intersect: -11543038976.70434
[2025-11-26 21:37:18] 2025-11-26 20:36:41,303 | INFO     | chi2: 1.335681375143416
[2025-11-26 21:37:18] 2025-11-26 20:36:41,303 | INFO     | current chi2=1.335681375143416 (change=0.29481457513755727 %)
[2025-11-26 21:37:18] 2025-11-26 20:36:41,303 | INFO     | left removable region: 20
[2025-11-26 21:37:18] 2025-11-26 20:36:41,303 | INFO     | sum of square deviations: 4729621702.0
[2025-11-26 21:37:18] 2025-11-26 20:36:41,303 | INFO     | sum of deviations: 70185667889.49998
[2025-11-26 21:37:18] 2025-11-26 20:36:41,304 | INFO     | mean x: 1764181139.5
[2025-11-26 21:37:18] 2025-11-26 20:36:41,304 | INFO     | mean y: 2774150.1169354836
[2025-11-26 21:37:18] 2025-11-26 20:36:41,304 | INFO     | intersect: -26176958470.25462
[2025-11-26 21:37:18] 2025-11-26 20:36:41,304 | INFO     | chi2: 0.03898388987410447
[2025-11-26 21:37:18] 2025-11-26 20:36:41,304 | INFO     | current memory leak: 14.84 B/s (using 248 data points, chi2=0.04)
[2025-11-26 21:37:18] 2025-11-26 20:36:41,304 | INFO     | could have reported an average CPU frequency of 4308 MHz (13 samples)
[2025-11-26 21:37:18] 2025-11-26 20:36:41,304 | INFO     | ..............................
[2025-11-26 21:37:18] 2025-11-26 20:36:41,304 | INFO     | . Timing measurements:
[2025-11-26 21:37:18] 2025-11-26 20:36:41,304 | INFO     | . get job = 0 s
[2025-11-26 21:37:18] 2025-11-26 20:36:41,304 | INFO     | . initial setup = 1 s
[2025-11-26 21:37:18] 2025-11-26 20:36:41,304 | INFO     | . payload setup = 4 s
[2025-11-26 21:37:18] 2025-11-26 20:36:41,304 | INFO     | . stage-in = 0 s
[2025-11-26 21:37:18] 2025-11-26 20:36:41,304 | INFO     | . payload execution = 17004 s
[2025-11-26 21:37:18] 2025-11-26 20:36:41,304 | INFO     | . stage-out = 1 s
[2025-11-26 21:37:18] 2025-11-26 20:36:41,304 | INFO     | . log creation = 0 s
[2025-11-26 21:37:18] 2025-11-26 20:36:41,304 | INFO     | ..............................
[2025-11-26 21:37:18] 2025-11-26 20:36:41,334 | INFO     | 
[2025-11-26 21:37:18] 2025-11-26 20:36:41,334 | INFO     | job summary report
[2025-11-26 21:37:18] 2025-11-26 20:36:41,334 | INFO     | --------------------------------------------------
[2025-11-26 21:37:18] 2025-11-26 20:36:41,334 | INFO     | PanDA job id: 6896713651
[2025-11-26 21:37:18] 2025-11-26 20:36:41,335 | INFO     | task id: 47556161
[2025-11-26 21:37:18] 2025-11-26 20:36:41,335 | INFO     | errors: (none)
[2025-11-26 21:37:18] 2025-11-26 20:36:41,335 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 21:37:18] 2025-11-26 20:36:41,335 | INFO     | pilot state: finished 
[2025-11-26 21:37:18] 2025-11-26 20:36:41,335 | INFO     | transexitcode: 0
[2025-11-26 21:37:18] 2025-11-26 20:36:41,335 | INFO     | exeerrorcode: 0
[2025-11-26 21:37:18] 2025-11-26 20:36:41,335 | INFO     | exeerrordiag: 
[2025-11-26 21:37:18] 2025-11-26 20:36:41,335 | INFO     | exitcode: 0
[2025-11-26 21:37:18] 2025-11-26 20:36:41,335 | INFO     | exitmsg: OK
[2025-11-26 21:37:18] 2025-11-26 20:36:41,335 | INFO     | cpuconsumptiontime: 99667 s
[2025-11-26 21:37:18] 2025-11-26 20:36:41,335 | INFO     | nevents: 1000
[2025-11-26 21:37:18] 2025-11-26 20:36:41,335 | INFO     | neventsw: 0
[2025-11-26 21:37:18] 2025-11-26 20:36:41,335 | INFO     | pid: 1831458
[2025-11-26 21:37:18] 2025-11-26 20:36:41,335 | INFO     | pgrp: 1831458
[2025-11-26 21:37:18] 2025-11-26 20:36:41,335 | INFO     | corecount: 6
[2025-11-26 21:37:18] 2025-11-26 20:36:41,335 | INFO     | event service: False
[2025-11-26 21:37:18] 2025-11-26 20:36:41,335 | INFO     | sizes: {0: 2284262, 4: 2284524, 11: 2284552, 17012: 2317676, 17014: 2326726, 17022: 2326916}
[2025-11-26 21:37:18] 2025-11-26 20:36:41,335 | INFO     | --------------------------------------------------
[2025-11-26 21:37:18] 2025-11-26 20:36:41,335 | INFO     | 
[2025-11-26 21:37:18] 2025-11-26 20:36:41,335 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-11-26 21:37:18] 2025-11-26 20:36:41,344 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 21:37:18] 2025-11-26 20:36:41,344 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 21:37:18] 2025-11-26 20:36:41,344 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 21:37:18] 2025-11-26 20:36:41,344 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 21:37:18] 2025-11-26 20:36:41,344 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 21:37:18] 2025-11-26 20:36:41,344 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 21:37:18] 2025-11-26 20:36:41,344 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 21:37:18] 2025-11-26 20:36:41,344 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 21:37:18] 2025-11-26 20:36:41,344 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 21:37:18] 2025-11-26 20:36:41,344 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 21:37:18] 2025-11-26 20:36:41,344 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 21:37:18] 2025-11-26 20:36:41,344 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 21:37:18] 2025-11-26 20:36:41,344 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 21:37:18] 2025-11-26 20:36:41,344 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 21:37:18] 2025-11-26 20:36:41,344 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 21:37:18] 2025-11-26 20:36:41,344 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 21:37:18] 2025-11-26 20:36:41,344 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 21:37:18] 2025-11-26 20:36:41,344 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 21:37:18] 2025-11-26 20:36:41,344 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 21:37:18] 2025-11-26 20:36:41,344 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 21:37:18] 2025-11-26 20:36:41,345 | INFO     | job 6896713651 has completed (purged errors)
[2025-11-26 21:37:18] 2025-11-26 20:36:41,345 | INFO     | overall cleanup function is called
[2025-11-26 21:37:18] 2025-11-26 20:36:42,353 | INFO     | --- collectZombieJob: --- 10, [1831458]
[2025-11-26 21:37:18] 2025-11-26 20:36:42,353 | INFO     | zombie collector waiting for pid 1831458
[2025-11-26 21:37:18] 2025-11-26 20:36:42,353 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 21:37:18] 2025-11-26 20:36:42,354 | INFO     | collected zombie processes
[2025-11-26 21:37:18] 2025-11-26 20:36:42,354 | INFO     | will attempt to kill all subprocesses of pid=1831458
[2025-11-26 21:37:18] 2025-11-26 20:36:42,390 | INFO     | process IDs to be killed: [1831458] (in reverse order)
[2025-11-26 21:37:18] 2025-11-26 20:36:42,407 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 21:37:18] 2025-11-26 20:36:42,407 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 21:37:18] 2025-11-26 20:36:42,408 | INFO     | did not find any defunct processes belonging to 1831458
[2025-11-26 21:37:18] 2025-11-26 20:36:42,409 | INFO     | did not find any defunct processes belonging to 1831458
[2025-11-26 21:37:18] 2025-11-26 20:36:42,410 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 21:37:18] 2025-11-26 20:36:42,410 | INFO     | ready for new job
[2025-11-26 21:37:18] 2025-11-26 20:36:42,410 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 21:37:18] 2025-11-26 20:36:42,410 | INFO     | ***************************************
[2025-11-26 21:37:18] 2025-11-26 20:36:42,410 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 21:37:18] 2025-11-26 20:36:42,410 | INFO     | ***************************************
[2025-11-26 21:37:18] 2025-11-26 20:36:42,410 | INFO     | 
[2025-11-26 21:37:18] 2025-11-26 20:36:42,411 | INFO     | architecture information:
[2025-11-26 21:37:18] 2025-11-26 20:36:42,411 | INFO     | executing command: cat /etc/os-release
[2025-11-26 21:37:18] 2025-11-26 20:36:42,417 | INFO     | cat /etc/os-release:
[2025-11-26 21:37:18] NAME="CentOS Linux"
[2025-11-26 21:37:18] VERSION="7 (Core)"
[2025-11-26 21:37:18] ID="centos"
[2025-11-26 21:37:18] ID_LIKE="rhel fedora"
[2025-11-26 21:37:18] VERSION_ID="7"
[2025-11-26 21:37:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 21:37:18] ANSI_COLOR="0;31"
[2025-11-26 21:37:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 21:37:18] HOME_URL="https://www.centos.org/"
[2025-11-26 21:37:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 21:37:18] 
[2025-11-26 21:37:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 21:37:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 21:37:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 21:37:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 21:37:18] 
[2025-11-26 21:37:18] 2025-11-26 20:36:42,417 | INFO     | ***************************************
[2025-11-26 21:37:18] 2025-11-26 20:36:42,920 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-11-26 21:37:18] 2025-11-26 20:36:42,930 | INFO     | sufficient remaining disk space (869925912576 B)
[2025-11-26 21:37:18] 2025-11-26 20:36:42,930 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 21:37:18] 2025-11-26 20:36:42,930 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 21:37:18] 2025-11-26 20:36:42,930 | INFO     | update_server=False
[2025-11-26 21:37:18] 2025-11-26 20:36:42,930 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 21:37:18] 2025-11-26 20:36:42,930 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 21:37:18] 2025-11-26 20:36:42,947 | INFO     | all payload control threads have been joined
[2025-11-26 21:37:18] 2025-11-26 20:36:43,068 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 21:37:18] 2025-11-26 20:36:43,068 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 21:37:18] 2025-11-26 20:36:43,069 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 21:37:18] 2025-11-26 20:36:43,069 | INFO     | will abort loop
[2025-11-26 21:37:18] 2025-11-26 20:36:43,933 | INFO     | [job] retrieve thread has finished
[2025-11-26 21:37:18] 2025-11-26 20:36:43,936 | INFO     | [job] queue monitor thread has finished
[2025-11-26 21:37:18] 2025-11-26 20:36:43,952 | INFO     | [payload] control thread has finished
[2025-11-26 21:37:18] 2025-11-26 20:36:43,990 | INFO     | all data control threads have been joined
[2025-11-26 21:37:18] 2025-11-26 20:36:44,074 | INFO     | [job] job monitor thread has finished
[2025-11-26 21:37:18] 2025-11-26 20:36:44,085 | INFO     | [payload] validate_post thread has finished
[2025-11-26 21:37:18] 2025-11-26 20:36:44,178 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 21:37:18] 2025-11-26 20:36:44,201 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 21:37:18] 2025-11-26 20:36:44,333 | INFO     | all job control threads have been joined
[2025-11-26 21:37:18] 2025-11-26 20:36:44,495 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 21:37:18] 2025-11-26 20:36:44,610 | INFO     | [data] copytool_in thread has finished
[2025-11-26 21:37:18] 2025-11-26 20:36:44,901 | INFO     | [job] validate thread has finished
[2025-11-26 21:37:18] 2025-11-26 20:36:44,961 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 21:37:18] 2025-11-26 20:36:44,995 | INFO     | [data] control thread has finished
[2025-11-26 21:37:18] 2025-11-26 20:36:45,064 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 21:37:18] 2025-11-26 20:36:45,091 | INFO     | [payload] failed_post thread has finished
[2025-11-26 21:37:18] 2025-11-26 20:36:45,339 | INFO     | [job] control thread has finished
[2025-11-26 21:37:18] 2025-11-26 20:36:45,365 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 21:37:18] 2025-11-26 20:36:46,183 | INFO     | [data] copytool_out thread has finished
[2025-11-26 21:37:18] 2025-11-26 20:36:48,207 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 21:37:18] 2025-11-26 20:37:12,360 | INFO     | [monitor] cgroup control has ended
[2025-11-26 21:37:18] 2025-11-26 20:37:13,154 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139634425321280)>', '<ExcThread(monitor, started 139633706903296)>']
[2025-11-26 21:37:18] 2025-11-26 20:37:13,493 | INFO     | PID=1824880 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 21:37:18] 2025-11-26 20:37:13,493 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 21:37:18] 2025-11-26 20:37:13,493 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 21:37:18] 2025-11-26 20:37:13,493 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 21:37:18] 2025-11-26 20:37:13,493 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 21:37:18] 2025-11-26 20:37:13,493 | INFO     | [monitor] control thread has ended
[2025-11-26 21:37:18] 2025-11-26 20:37:18,180 | INFO     | all workflow threads have been joined
[2025-11-26 21:37:18] 2025-11-26 20:37:18,180 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 21:37:18] 2025-11-26 20:37:18,181 | INFO     | traces error code: 0
[2025-11-26 21:37:18] 2025-11-26 20:37:18,181 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 21:37:18] 2025-11-26 20:37:18,228 [wrapper] ==== pilot stdout END ====
[2025-11-26 21:37:18] 2025-11-26 20:37:18,229 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 21:37:18] 2025-11-26 20:37:18,230 [wrapper] pilotpid: 1824880
[2025-11-26 21:37:18] 2025-11-26 20:37:18,231 [wrapper] Pilot exit status: 0
[2025-11-26 21:37:18] 2025-11-26 20:37:18,234 [wrapper] pandaids: 6896713651
[2025-11-26 21:37:18] 2025-11-26 20:37:18,243 [wrapper] cleanup supervisor_pilot 1859263 1824881
[2025-11-26 21:37:18] 2025-11-26 20:37:18,244 [wrapper] Test setup, not cleaning
[2025-11-26 21:37:18] 2025-11-26 20:37:18,246 [wrapper] apfmon messages muted
[2025-11-26 21:37:18] 2025-11-26 20:37:18,246 [wrapper] ==== wrapper stdout END ====
[2025-11-26 21:37:18] 2025-11-26 20:37:18,247 [wrapper] ==== wrapper stderr END ====
[2025-11-26 21:37:18]  *** Error codes and diagnostics ***
[2025-11-26 21:37:18]     "exeErrorCode": 0,
[2025-11-26 21:37:18]     "exeErrorDiag": "",
[2025-11-26 21:37:18]     "pilotErrorCode": 0,
[2025-11-26 21:37:18]     "pilotErrorDiag": "",
[2025-11-26 21:37:18]  *** Listing of results directory ***
[2025-11-26 21:37:18] total 1316332
[2025-11-26 21:37:18] -rw-r--r-- 1 boinc boinc    576529 Nov 25 06:12 pilot3.tar.gz
[2025-11-26 21:37:18] -rw-r--r-- 1 boinc boinc      5112 Nov 25 06:25 queuedata.json
[2025-11-26 21:37:18] -rwx------ 1 boinc boinc     36292 Nov 25 06:26 runpilot2-wrapper.sh
[2025-11-26 21:37:18] -rw-r--r-- 1 boinc boinc       100 Nov 26 16:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 21:37:18] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 16:52 run_atlas
[2025-11-26 21:37:18] -rw-r--r-- 1 boinc boinc       105 Nov 26 16:52 job.xml
[2025-11-26 21:37:18] -rw-r--r-- 2 boinc boinc     15847 Nov 26 16:52 start_atlas.sh
[2025-11-26 21:37:18] drwxrwx--x 2 boinc boinc        68 Nov 26 16:52 shared
[2025-11-26 21:37:18] -rw-r--r-- 2 boinc boinc    590109 Nov 26 16:52 input.tar.gz
[2025-11-26 21:37:18] -rw-r--r-- 1 boinc boinc      6551 Nov 26 16:52 init_data.xml
[2025-11-26 21:37:18] -rw-r--r-- 2 boinc boinc 408621799 Nov 26 16:52 EVNT.47483658._002104.pool.root.1
[2025-11-26 21:37:18] -rw-r--r-- 1 boinc boinc         0 Nov 26 16:52 boinc_lockfile
[2025-11-26 21:37:18] -rw-r--r-- 1 boinc boinc      2784 Nov 26 16:52 pandaJob.out
[2025-11-26 21:37:18] -rw------- 1 boinc boinc    991855 Nov 26 16:52 agis_schedconf.cvmfs.json
[2025-11-26 21:37:18] drwx------ 5 boinc boinc      4096 Nov 26 16:52 pilot3
[2025-11-26 21:37:18] -rw-r--r-- 1 boinc boinc       531 Nov 26 21:32 boinc_task_state.xml
[2025-11-26 21:37:18] -rw------- 1 boinc boinc 927860282 Nov 26 21:36 HITS.47556161._000877.pool.root.1
[2025-11-26 21:37:18] -rw------- 1 boinc boinc      1030 Nov 26 21:36 memory_monitor_summary.json
[2025-11-26 21:37:18] -rw------- 1 boinc boinc   1516240 Nov 26 21:36 agis_ddmendpoints.agis.ALL.json
[2025-11-26 21:37:18] -rw------- 1 boinc boinc   1357007 Nov 26 21:36 log.47556161._000877.job.log.tgz.1
[2025-11-26 21:37:18] -rw------- 1 boinc boinc      8596 Nov 26 21:36 heartbeat.json
[2025-11-26 21:37:18] -rw-r--r-- 1 boinc boinc      8192 Nov 26 21:36 boinc_mmap_file
[2025-11-26 21:37:18] -rw-r--r-- 1 boinc boinc        28 Nov 26 21:36 wrapper_checkpoint.txt
[2025-11-26 21:37:18] -rw------- 1 boinc boinc        95 Nov 26 21:37 pilot_heartbeat.json
[2025-11-26 21:37:18] -rw------- 1 boinc boinc      4935 Nov 26 21:37 pilotlog.txt
[2025-11-26 21:37:18] -rw------- 1 boinc boinc   2411690 Nov 26 21:37 log.47556161._000877.job.log.1
[2025-11-26 21:37:18] -rw------- 1 boinc boinc       353 Nov 26 21:37 output.list
[2025-11-26 21:37:18] -rw-r--r-- 1 boinc boinc       620 Nov 26 21:37 runtime_log
[2025-11-26 21:37:18] -rw------- 1 boinc boinc   3788800 Nov 26 21:37 result.tar.gz
[2025-11-26 21:37:18] -rw------- 1 boinc boinc       663 Nov 26 21:37 uOANDmek0h8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmBMJKDmiPLDnn.diag
[2025-11-26 21:37:18] -rw-r--r-- 1 boinc boinc      8831 Nov 26 21:37 runtime_log.err
[2025-11-26 21:37:18] -rw-r--r-- 1 boinc boinc     21366 Nov 26 21:37 stderr.txt
[2025-11-26 21:37:18] HITS file was successfully produced:
[2025-11-26 21:37:18] -rw------- 1 boinc boinc 927860282 Nov 26 21:36 shared/HITS.pool.root.1
[2025-11-26 21:37:18]  *** Contents of shared directory: ***
[2025-11-26 21:37:18] total 1309460
[2025-11-26 21:37:18] -rw-r--r-- 2 boinc boinc     15847 Nov 26 16:52 start_atlas.sh
[2025-11-26 21:37:18] -rw-r--r-- 2 boinc boinc    590109 Nov 26 16:52 input.tar.gz
[2025-11-26 21:37:18] -rw-r--r-- 2 boinc boinc 408621799 Nov 26 16:52 ATLAS.root_0
[2025-11-26 21:37:18] -rw------- 1 boinc boinc 927860282 Nov 26 21:36 HITS.pool.root.1
[2025-11-26 21:37:18] -rw------- 1 boinc boinc   3788800 Nov 26 21:37 result.tar.gz
21:37:19 (1821176): run_atlas exited; CPU time 99677.398899
21:37:19 (1821176): called boinc_finish(0)

</stderr_txt>
]]>

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