Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:19:53 (2861721): wrapper (7.7.26015): starting
21:19:53 (2861721): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 21:19:53] Arguments: --nthreads 8
[2025-11-25 21:19:53] Threads: 8
[2025-11-25 21:19:53] Checking for CVMFS
[2025-11-25 21:19:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 21:19:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 21:19:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 21:19:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 21:19:54] 2.13.3.0 10892 29395 325476 153305 2 215 20536802 40960001 21083 16776704 0 87956840 99.617 91520547 39512 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 21:19:54] CVMFS is ok
[2025-11-25 21:19:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 21:19:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 21:19:54] Further information can be found at the LHC@home message board.
[2025-11-25 21:19:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 21:19:54] Checking for apptainer binary...
[2025-11-25 21:19:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 21:19:54] Running /usr/bin/apptainer --version
[2025-11-25 21:19:54] apptainer version 1.4.4-1.el9
[2025-11-25 21:19:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 21:19:55] c6-8-12-4.aglt2.org
[2025-11-25 21:19:55] apptainer works
[2025-11-25 21:19:55] Set ATHENA_PROC_NUMBER=8
[2025-11-25 21:19:55] Set ATHENA_CORE_NUMBER=8
[2025-11-25 21:19:55] Starting ATLAS job with PandaID=6893847966
[2025-11-25 21:19:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 13:57:07]  *** The last 200 lines of the pilot log: ***
[2025-11-26 13:57:07] 2025-11-26 18:55:31,519 | INFO     | monitor loop #3733: job 0:6893847966 is in state 'finished'
[2025-11-26 13:57:07] 2025-11-26 18:55:31,519 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 13:57:07] 2025-11-26 18:55:32,156 | INFO     | time since job start (59685s) is within the limit (172800.0s)
[2025-11-26 13:57:07] 2025-11-26 18:55:33,444 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 13:57:07] 2025-11-26 18:55:33,459 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2788.0450357142863
[2025-11-26 13:57:07] 2025-11-26 18:55:33,469 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6893847966/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 13:57:07] 2025-11-26 18:55:33,470 | INFO     | extracted standard info from prmon json
[2025-11-26 13:57:07] 2025-11-26 18:55:33,470 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 13:57:07] 2025-11-26 18:55:33,470 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 13:57:07] 2025-11-26 18:55:33,482 | INFO     | fitting pss+swap vs Time
[2025-11-26 13:57:07] 2025-11-26 18:55:33,484 | INFO     | sum of square deviations: 289230369816.0
[2025-11-26 13:57:07] 2025-11-26 18:55:33,503 | INFO     | sum of deviations: 2511638393781.998
[2025-11-26 13:57:07] 2025-11-26 18:55:33,504 | INFO     | mean x: 1764153531.0
[2025-11-26 13:57:07] 2025-11-26 18:55:33,504 | INFO     | mean y: 2963663.977482088
[2025-11-26 13:57:07] 2025-11-26 18:55:33,504 | INFO     | intersect: -15316712979.261955
[2025-11-26 13:57:07] 2025-11-26 18:55:33,505 | INFO     | chi2: 9.803396814347709
[2025-11-26 13:57:07] 2025-11-26 18:55:33,509 | INFO     | sum of square deviations: 284815386599.7396
[2025-11-26 13:57:07] 2025-11-26 18:55:33,538 | INFO     | sum of deviations: 2861774941851.5547
[2025-11-26 13:57:07] 2025-11-26 18:55:33,542 | INFO     | mean x: 1764153378.5360081
[2025-11-26 13:57:07] 2025-11-26 18:55:33,542 | INFO     | mean y: 2975754.8127572015
[2025-11-26 13:57:07] 2025-11-26 18:55:33,542 | INFO     | intersect: -17722927303.128723
[2025-11-26 13:57:07] 2025-11-26 18:55:33,543 | INFO     | chi2: 6.4181645661116224
[2025-11-26 13:57:07] 2025-11-26 18:55:33,544 | INFO     | current chi2=6.4181645661116224 (change=34.53121721321784 %)
[2025-11-26 13:57:07] 2025-11-26 18:55:33,545 | INFO     | sum of square deviations: 280444549205.2039
[2025-11-26 13:57:07] 2025-11-26 18:55:33,582 | INFO     | sum of deviations: 3037901837619.062
[2025-11-26 13:57:07] 2025-11-26 18:55:33,583 | INFO     | mean x: 1764153226.0537746
[2025-11-26 13:57:07] 2025-11-26 18:55:33,583 | INFO     | mean y: 2981891.037228542
[2025-11-26 13:57:07] 2025-11-26 18:55:33,583 | INFO     | intersect: -19107121487.54151
[2025-11-26 13:57:07] 2025-11-26 18:55:33,584 | INFO     | chi2: 5.208810754002313
[2025-11-26 13:57:07] 2025-11-26 18:55:33,584 | INFO     | current chi2=5.208810754002313 (change=18.8426737839473 %)
[2025-11-26 13:57:07] 2025-11-26 18:55:33,584 | INFO     | right removable region: 966
[2025-11-26 13:57:07] 2025-11-26 18:55:33,585 | INFO     | sum of square deviations: 284811214809.7394
[2025-11-26 13:57:07] 2025-11-26 18:55:33,620 | INFO     | sum of deviations: 2120672075272.3
[2025-11-26 13:57:07] 2025-11-26 18:55:33,620 | INFO     | mean x: 1764153683.5360081
[2025-11-26 13:57:07] 2025-11-26 18:55:33,620 | INFO     | mean y: 2977156.577160494
[2025-11-26 13:57:07] 2025-11-26 18:55:33,620 | INFO     | intersect: -13132711533.4303
[2025-11-26 13:57:07] 2025-11-26 18:55:33,621 | INFO     | chi2: 5.939639328045518
[2025-11-26 13:57:07] 2025-11-26 18:55:33,621 | INFO     | current chi2=5.939639328045518 (change=39.41243590841298 %)
[2025-11-26 13:57:07] 2025-11-26 18:55:33,659 | INFO     | sum of square deviations: 280437388195.2184
[2025-11-26 13:57:07] 2025-11-26 18:55:33,694 | INFO     | sum of deviations: 1930779513168.1445
[2025-11-26 13:57:07] 2025-11-26 18:55:33,694 | INFO     | mean x: 1764153836.0703206
[2025-11-26 13:57:07] 2025-11-26 18:55:33,694 | INFO     | mean y: 2983769.7331954497
[2025-11-26 13:57:07] 2025-11-26 18:55:33,694 | INFO     | intersect: -12143014688.897598
[2025-11-26 13:57:07] 2025-11-26 18:55:33,700 | INFO     | chi2: 4.960370119248051
[2025-11-26 13:57:07] 2025-11-26 18:55:33,700 | INFO     | current chi2=4.960370119248051 (change=16.48701469420204 %)
[2025-11-26 13:57:07] 2025-11-26 18:55:33,700 | INFO     | left removable region: 20
[2025-11-26 13:57:07] 2025-11-26 18:55:33,701 | INFO     | sum of square deviations: 262565957174.27548
[2025-11-26 13:57:07] 2025-11-26 18:55:33,731 | INFO     | sum of deviations: 2350302074891.2983
[2025-11-26 13:57:07] 2025-11-26 18:55:33,732 | INFO     | mean x: 1764153805.653277
[2025-11-26 13:57:07] 2025-11-26 18:55:33,732 | INFO     | mean y: 3006715.418604651
[2025-11-26 13:57:07] 2025-11-26 18:55:33,732 | INFO     | intersect: -15788432488.94945
[2025-11-26 13:57:07] 2025-11-26 18:55:33,737 | INFO     | chi2: 0.24857279102973776
[2025-11-26 13:57:07] 2025-11-26 18:55:33,737 | INFO     | current memory leak: 8.95 B/s (using 946 data points, chi2=0.25)
[2025-11-26 13:57:07] 2025-11-26 18:55:33,738 | INFO     | could have reported an average CPU frequency of 2862 MHz (36 samples)
[2025-11-26 13:57:07] 2025-11-26 18:55:33,739 | INFO     | ..............................
[2025-11-26 13:57:07] 2025-11-26 18:55:33,739 | INFO     | . Timing measurements:
[2025-11-26 13:57:07] 2025-11-26 18:55:33,739 | INFO     | . get job = 0 s
[2025-11-26 13:57:07] 2025-11-26 18:55:33,739 | INFO     | . initial setup = 6 s
[2025-11-26 13:57:07] 2025-11-26 18:55:33,739 | INFO     | . payload setup = 28 s
[2025-11-26 13:57:07] 2025-11-26 18:55:33,739 | INFO     | . stage-in = 0 s
[2025-11-26 13:57:07] 2025-11-26 18:55:33,739 | INFO     | . payload execution = 59566 s
[2025-11-26 13:57:07] 2025-11-26 18:55:33,739 | INFO     | . stage-out = 6 s
[2025-11-26 13:57:07] 2025-11-26 18:55:33,739 | INFO     | . log creation = 0 s
[2025-11-26 13:57:07] 2025-11-26 18:55:33,739 | INFO     | ..............................
[2025-11-26 13:57:07] 2025-11-26 18:55:33,920 | INFO     | 
[2025-11-26 13:57:07] 2025-11-26 18:55:33,920 | INFO     | job summary report
[2025-11-26 13:57:07] 2025-11-26 18:55:33,920 | INFO     | --------------------------------------------------
[2025-11-26 13:57:07] 2025-11-26 18:55:33,920 | INFO     | PanDA job id: 6893847966
[2025-11-26 13:57:07] 2025-11-26 18:55:33,920 | INFO     | task id: 47523449
[2025-11-26 13:57:07] 2025-11-26 18:55:33,920 | INFO     | errors: (none)
[2025-11-26 13:57:07] 2025-11-26 18:55:33,920 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 13:57:07] 2025-11-26 18:55:33,920 | INFO     | pilot state: finished 
[2025-11-26 13:57:07] 2025-11-26 18:55:33,920 | INFO     | transexitcode: 0
[2025-11-26 13:57:07] 2025-11-26 18:55:33,921 | INFO     | exeerrorcode: 0
[2025-11-26 13:57:07] 2025-11-26 18:55:33,921 | INFO     | exeerrordiag: 
[2025-11-26 13:57:07] 2025-11-26 18:55:33,921 | INFO     | exitcode: 0
[2025-11-26 13:57:07] 2025-11-26 18:55:33,921 | INFO     | exitmsg: OK
[2025-11-26 13:57:07] 2025-11-26 18:55:33,921 | INFO     | cpuconsumptiontime: 230449 s
[2025-11-26 13:57:07] 2025-11-26 18:55:33,921 | INFO     | nevents: 1000
[2025-11-26 13:57:07] 2025-11-26 18:55:33,921 | INFO     | neventsw: 0
[2025-11-26 13:57:07] 2025-11-26 18:55:33,921 | INFO     | pid: 2891123
[2025-11-26 13:57:07] 2025-11-26 18:55:33,921 | INFO     | pgrp: 2891123
[2025-11-26 13:57:07] 2025-11-26 18:55:33,921 | INFO     | corecount: 8
[2025-11-26 13:57:07] 2025-11-26 18:55:33,921 | INFO     | event service: False
[2025-11-26 13:57:07] 2025-11-26 18:55:33,921 | INFO     | sizes: {0: 2283487, 1: 2284172, 2: 2284371, 13: 2284371, 24: 2284427, 27: 2284717, 34: 2284873, 59599: 2337684, 59600: 2337683, 59606: 2346733, 59608: 2346789, 596
[2025-11-26 13:57:07] 2025-11-26 18:55:33,921 | INFO     | --------------------------------------------------
[2025-11-26 13:57:07] 2025-11-26 18:55:33,921 | INFO     | 
[2025-11-26 13:57:07] 2025-11-26 18:55:33,921 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-26 13:57:07] 2025-11-26 18:55:33,960 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 13:57:07] 2025-11-26 18:55:33,962 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 13:57:07] 2025-11-26 18:55:33,962 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 13:57:07] 2025-11-26 18:55:33,962 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 13:57:07] 2025-11-26 18:55:33,962 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 13:57:07] 2025-11-26 18:55:33,962 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 13:57:07] 2025-11-26 18:55:33,962 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 13:57:07] 2025-11-26 18:55:33,962 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 13:57:07] 2025-11-26 18:55:33,962 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 13:57:07] 2025-11-26 18:55:33,962 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 13:57:07] 2025-11-26 18:55:33,962 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 13:57:07] 2025-11-26 18:55:33,962 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 13:57:07] 2025-11-26 18:55:33,962 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 13:57:07] 2025-11-26 18:55:33,962 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 13:57:07] 2025-11-26 18:55:33,962 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 13:57:07] 2025-11-26 18:55:33,962 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 13:57:07] 2025-11-26 18:55:33,963 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 13:57:07] 2025-11-26 18:55:33,963 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 13:57:07] 2025-11-26 18:55:33,967 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 13:57:07] 2025-11-26 18:55:33,967 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 13:57:07] 2025-11-26 18:55:33,967 | INFO     | job 6893847966 has completed (purged errors)
[2025-11-26 13:57:07] 2025-11-26 18:55:33,967 | INFO     | overall cleanup function is called
[2025-11-26 13:57:07] 2025-11-26 18:55:34,991 | INFO     | --- collectZombieJob: --- 10, [2891123]
[2025-11-26 13:57:07] 2025-11-26 18:55:34,991 | INFO     | zombie collector waiting for pid 2891123
[2025-11-26 13:57:07] 2025-11-26 18:55:34,991 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 13:57:07] 2025-11-26 18:55:34,991 | INFO     | collected zombie processes
[2025-11-26 13:57:07] 2025-11-26 18:55:34,991 | INFO     | will attempt to kill all subprocesses of pid=2891123
[2025-11-26 13:57:07] 2025-11-26 18:55:35,672 | INFO     | process IDs to be killed: [2891123] (in reverse order)
[2025-11-26 13:57:07] 2025-11-26 18:55:35,802 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 13:57:07] 2025-11-26 18:55:35,802 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 13:57:07] 2025-11-26 18:55:35,887 | INFO     | did not find any defunct processes belonging to 2891123
[2025-11-26 13:57:07] 2025-11-26 18:55:36,038 | INFO     | did not find any defunct processes belonging to 2891123
[2025-11-26 13:57:07] 2025-11-26 18:55:36,085 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 13:57:07] 2025-11-26 18:55:36,085 | INFO     | ready for new job
[2025-11-26 13:57:07] 2025-11-26 18:55:36,085 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 13:57:07] 2025-11-26 18:55:36,129 | INFO     | ***************************************
[2025-11-26 13:57:07] 2025-11-26 18:55:36,129 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 13:57:07] 2025-11-26 18:55:36,129 | INFO     | ***************************************
[2025-11-26 13:57:07] 2025-11-26 18:55:36,129 | INFO     | 
[2025-11-26 13:57:07] 2025-11-26 18:55:36,132 | INFO     | architecture information:
[2025-11-26 13:57:07] 2025-11-26 18:55:36,132 | INFO     | executing command: cat /etc/os-release
[2025-11-26 13:57:07] 2025-11-26 18:55:36,207 | INFO     | cat /etc/os-release:
[2025-11-26 13:57:07] NAME="CentOS Linux"
[2025-11-26 13:57:07] VERSION="7 (Core)"
[2025-11-26 13:57:07] ID="centos"
[2025-11-26 13:57:07] ID_LIKE="rhel fedora"
[2025-11-26 13:57:07] VERSION_ID="7"
[2025-11-26 13:57:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 13:57:07] ANSI_COLOR="0;31"
[2025-11-26 13:57:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 13:57:07] HOME_URL="https://www.centos.org/"
[2025-11-26 13:57:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 13:57:07] 
[2025-11-26 13:57:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 13:57:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 13:57:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 13:57:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 13:57:07] 
[2025-11-26 13:57:07] 2025-11-26 18:55:36,208 | INFO     | ***************************************
[2025-11-26 13:57:07] 2025-11-26 18:55:36,712 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-26 13:57:07] 2025-11-26 18:55:36,777 | INFO     | sufficient remaining disk space (50372542464 B)
[2025-11-26 13:57:07] 2025-11-26 18:55:36,778 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 13:57:07] 2025-11-26 18:55:36,778 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 13:57:07] 2025-11-26 18:55:36,778 | INFO     | update_server=False
[2025-11-26 13:57:07] 2025-11-26 18:55:36,778 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 13:57:07] 2025-11-26 18:55:37,152 | INFO     | all payload control threads have been joined
[2025-11-26 13:57:07] 2025-11-26 18:55:37,309 | INFO     | all job control threads have been joined
[2025-11-26 13:57:07] 2025-11-26 18:55:37,315 | INFO     | all data control threads have been joined
[2025-11-26 13:57:07] 2025-11-26 18:55:37,584 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 13:57:07] 2025-11-26 18:55:37,584 | INFO     | aborting loop
[2025-11-26 13:57:07] 2025-11-26 18:55:37,784 | INFO     | [job] retrieve thread has finished
[2025-11-26 13:57:07] 2025-11-26 18:55:37,805 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 13:57:07] 2025-11-26 18:55:37,808 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 13:57:07] 2025-11-26 18:55:37,913 | INFO     | [data] copytool_in thread has finished
[2025-11-26 13:57:07] 2025-11-26 18:55:37,913 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 13:57:07] 2025-11-26 18:55:38,174 | INFO     | [payload] control thread has finished
[2025-11-26 13:57:07] 2025-11-26 18:55:38,318 | INFO     | [job] control thread has finished
[2025-11-26 13:57:07] 2025-11-26 18:55:38,321 | INFO     | [data] control thread has finished
[2025-11-26 13:57:07] 2025-11-26 18:55:38,330 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 13:57:07] 2025-11-26 18:55:38,592 | INFO     | [job] job monitor thread has finished
[2025-11-26 13:57:07] 2025-11-26 18:55:38,692 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 13:57:07] 2025-11-26 18:55:38,774 | INFO     | [payload] validate_post thread has finished
[2025-11-26 13:57:07] 2025-11-26 18:55:38,872 | INFO     | [payload] failed_post thread has finished
[2025-11-26 13:57:07] 2025-11-26 18:55:38,960 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 13:57:07] 2025-11-26 18:55:38,973 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 13:57:07] 2025-11-26 18:55:39,270 | INFO     | [job] validate thread has finished
[2025-11-26 13:57:07] 2025-11-26 18:55:39,814 | INFO     | [data] copytool_out thread has finished
[2025-11-26 13:57:07] 2025-11-26 18:55:39,979 | INFO     | [job] queue monitor thread has finished
[2025-11-26 13:57:07] 2025-11-26 18:55:41,818 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 13:57:07] 2025-11-26 18:56:05,869 | INFO     | PID=2869999 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 13:57:07] 2025-11-26 18:56:05,869 | INFO     | .. there are 32 such processes running
[2025-11-26 13:57:07] 2025-11-26 18:56:05,870 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 13:57:07] 2025-11-26 18:56:05,870 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 13:57:07] 2025-11-26 18:56:05,870 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 13:57:07] 2025-11-26 18:56:34,727 | INFO     | [monitor] cgroup control has ended
[2025-11-26 13:57:07] 2025-11-26 18:56:35,295 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139938983483200)>', '<ExcThread(monitor, started 139938305644288)>']
[2025-11-26 13:57:07] 2025-11-26 18:56:36,097 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 13:57:07] 2025-11-26 18:56:36,097 | INFO     | [monitor] control thread has ended
[2025-11-26 13:57:07] 2025-11-26 18:56:40,321 | INFO     | all workflow threads have been joined
[2025-11-26 13:57:07] 2025-11-26 18:56:40,321 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 13:57:07] 2025-11-26 18:56:40,321 | INFO     | traces error code: 0
[2025-11-26 13:57:07] 2025-11-26 18:56:40,321 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 13:57:07] 2025-11-26 18:56:40,714 [wrapper] ==== pilot stdout END ====
[2025-11-26 13:57:07] 2025-11-26 18:56:40,754 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 13:57:07] 2025-11-26 18:56:40,787 [wrapper] pilotpid: 2869999
[2025-11-26 13:57:07] 2025-11-26 18:56:40,832 [wrapper] Pilot exit status: 0
[2025-11-26 13:57:07] 2025-11-26 18:56:40,889 [wrapper] pandaids: 6893847966
[2025-11-26 13:57:07] 2025-11-26 18:56:40,980 [wrapper] cleanup supervisor_pilot 2003286 2870000
[2025-11-26 13:57:07] 2025-11-26 18:56:40,983 [wrapper] Test setup, not cleaning
[2025-11-26 13:57:07] 2025-11-26 18:56:40,987 [wrapper] apfmon messages muted
[2025-11-26 13:57:07] 2025-11-26 18:56:40,990 [wrapper] ==== wrapper stdout END ====
[2025-11-26 13:57:07] 2025-11-26 18:56:40,994 [wrapper] ==== wrapper stderr END ====
[2025-11-26 13:57:07]  *** Error codes and diagnostics ***
[2025-11-26 13:57:07]     "exeErrorCode": 0,
[2025-11-26 13:57:07]     "exeErrorDiag": "",
[2025-11-26 13:57:07]     "pilotErrorCode": 0,
[2025-11-26 13:57:07]     "pilotErrorDiag": "",
[2025-11-26 13:57:07]  *** Listing of results directory ***
[2025-11-26 13:57:07] total 1323128
[2025-11-26 13:57:07] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 05:06 pilot3.tar.gz
[2025-11-26 13:57:07] -rwx------. 1 boincer umatlas     36292 Nov 20 05:26 runpilot2-wrapper.sh
[2025-11-26 13:57:07] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 05:27 queuedata.json
[2025-11-26 13:57:07] -rw-r--r--. 1 boincer umatlas       100 Nov 25 21:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 13:57:07] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 21:19 run_atlas
[2025-11-26 13:57:07] -rw-r--r--. 1 boincer umatlas       105 Nov 25 21:19 job.xml
[2025-11-26 13:57:07] -rw-r--r--. 2 boincer umatlas 407832127 Nov 25 21:19 EVNT.47493127._000248.pool.root.1
[2025-11-26 13:57:07] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 21:19 start_atlas.sh
[2025-11-26 13:57:07] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 21:19 shared
[2025-11-26 13:57:07] -rw-r--r--. 2 boincer umatlas    590097 Nov 25 21:19 input.tar.gz
[2025-11-26 13:57:07] -rw-r--r--. 1 boincer umatlas         0 Nov 25 21:19 boinc_lockfile
[2025-11-26 13:57:07] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 21:19 pandaJob.out
[2025-11-26 13:57:07] -rw-------. 1 boincer umatlas        57 Nov 25 21:19 setup.sh.local
[2025-11-26 13:57:07] -rw-------. 1 boincer umatlas    991877 Nov 25 21:20 agis_schedconf.cvmfs.json
[2025-11-26 13:57:07] drwx------. 5 boincer umatlas      4096 Nov 25 21:20 pilot3
[2025-11-26 13:57:07] -rw-r--r--. 1 boincer umatlas       533 Nov 26 13:43 boinc_task_state.xml
[2025-11-26 13:57:07] -rw-------. 1 boincer umatlas 923430510 Nov 26 13:54 HITS.47523449._002480.pool.root.1
[2025-11-26 13:57:07] -rw-------. 1 boincer umatlas      1065 Nov 26 13:54 memory_monitor_summary.json
[2025-11-26 13:57:07] -rw-------. 1 boincer umatlas   1516240 Nov 26 13:55 agis_ddmendpoints.agis.ALL.json
[2025-11-26 13:57:07] -rw-------. 1 boincer umatlas   2132736 Nov 26 13:55 log.47523449._002480.job.log.tgz.1
[2025-11-26 13:57:07] -rw-r--r--. 1 boincer umatlas      6845 Nov 26 13:55 init_data.xml
[2025-11-26 13:57:07] -rw-------. 1 boincer umatlas      8632 Nov 26 13:55 heartbeat.json
[2025-11-26 13:57:07] -rw-------. 1 boincer umatlas        95 Nov 26 13:56 pilot_heartbeat.json
[2025-11-26 13:57:07] -rw-------. 1 boincer umatlas      4824 Nov 26 13:56 pilotlog.txt
[2025-11-26 13:57:07] -rw-------. 1 boincer umatlas   7716342 Nov 26 13:56 log.47523449._002480.job.log.1
[2025-11-26 13:57:07] -rw-------. 1 boincer umatlas       353 Nov 26 13:56 output.list
[2025-11-26 13:57:07] -rw-r--r--. 1 boincer umatlas       620 Nov 26 13:56 runtime_log
[2025-11-26 13:57:07] -rw-------. 1 boincer umatlas   9871360 Nov 26 13:56 result.tar.gz
[2025-11-26 13:57:07] -rw-r--r--. 1 boincer umatlas      9348 Nov 26 13:56 runtime_log.err
[2025-11-26 13:57:07] -rw-------. 1 boincer umatlas       662 Nov 26 13:56 148KDmm2Gg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm3SHKDmvvOygn.diag
[2025-11-26 13:57:07] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 13:57 boinc_mmap_file
[2025-11-26 13:57:07] -rw-r--r--. 1 boincer umatlas     21369 Nov 26 13:57 stderr.txt
[2025-11-26 13:57:07] -rw-r--r--. 1 boincer umatlas        29 Nov 26 13:57 wrapper_checkpoint.txt
[2025-11-26 13:57:07] HITS file was successfully produced:
[2025-11-26 13:57:07] -rw-------. 1 boincer umatlas 923430510 Nov 26 13:54 shared/HITS.pool.root.1
[2025-11-26 13:57:07]  *** Contents of shared directory: ***
[2025-11-26 13:57:07] total 1310308
[2025-11-26 13:57:07] -rw-r--r--. 2 boincer umatlas 407832127 Nov 25 21:19 ATLAS.root_0
[2025-11-26 13:57:07] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 21:19 start_atlas.sh
[2025-11-26 13:57:07] -rw-r--r--. 2 boincer umatlas    590097 Nov 25 21:19 input.tar.gz
[2025-11-26 13:57:07] -rw-------. 1 boincer umatlas 923430510 Nov 26 13:54 HITS.pool.root.1
[2025-11-26 13:57:07] -rw-------. 1 boincer umatlas   9871360 Nov 26 13:56 result.tar.gz
13:57:09 (2861721): run_atlas exited; CPU time 231710.864897
13:57:09 (2861721): called boinc_finish(0)

</stderr_txt>
]]>

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