Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:00:08 (152239): wrapper (7.7.26015): starting
00:00:08 (152239): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 00:00:08] Arguments: --nthreads 9
[2025-11-26 00:00:08] Threads: 9
[2025-11-26 00:00:08] Checking for CVMFS
[2025-11-26 00:00:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:00:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:00:08] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:00:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:00:08] 2.13.3.0 12460 29601 330008 153309 0 510 21407269 32935936 49468 16776704 0 296022021 99.633 281028934 37413 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 00:00:08] CVMFS is ok
[2025-11-26 00:00:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:00:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:00:08] Further information can be found at the LHC@home message board.
[2025-11-26 00:00:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:00:08] Checking for apptainer binary...
[2025-11-26 00:00:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:00:08] Running /usr/bin/apptainer --version
[2025-11-26 00:00:08] apptainer version 1.4.4-1.el9
[2025-11-26 00:00:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:00:09] c7-6-31.aglt2.org
[2025-11-26 00:00:09] apptainer works
[2025-11-26 00:00:09] Set ATHENA_PROC_NUMBER=9
[2025-11-26 00:00:09] Set ATHENA_CORE_NUMBER=9
[2025-11-26 00:00:09] Starting ATLAS job with PandaID=6893846330
[2025-11-26 00:00:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 08:53:41]  *** The last 200 lines of the pilot log: ***
[2025-11-26 08:53:41] 2025-11-26 13:52:56,416 | INFO     | .. there are 82 such processes running
[2025-11-26 08:53:41] 2025-11-26 13:52:56,734 | INFO     | monitor loop #2066: job 0:6893846330 is in state 'finished'
[2025-11-26 08:53:41] 2025-11-26 13:52:56,735 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 08:53:41] 2025-11-26 13:52:56,890 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 08:53:41] 2025-11-26 13:52:56,898 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3421.9841979166663
[2025-11-26 08:53:41] 2025-11-26 13:52:56,912 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6893846330/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 08:53:41] 2025-11-26 13:52:56,912 | INFO     | extracted standard info from prmon json
[2025-11-26 08:53:41] 2025-11-26 13:52:56,912 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 08:53:41] 2025-11-26 13:52:56,912 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 08:53:41] 2025-11-26 13:52:56,919 | INFO     | fitting pss+swap vs Time
[2025-11-26 08:53:41] 2025-11-26 13:52:56,920 | INFO     | sum of square deviations: 44355839182.53912
[2025-11-26 08:53:41] 2025-11-26 13:52:56,925 | INFO     | sum of deviations: 4270018460773.918
[2025-11-26 08:53:41] 2025-11-26 13:52:56,925 | INFO     | mean x: 1764149231.5200765
[2025-11-26 08:53:41] 2025-11-26 13:52:56,925 | INFO     | mean y: 7405444.007648184
[2025-11-26 08:53:41] 2025-11-26 13:52:56,925 | INFO     | intersect: -169822540848.97617
[2025-11-26 08:53:41] 2025-11-26 13:52:56,926 | INFO     | chi2: 16.528598936102977
[2025-11-26 08:53:41] 2025-11-26 13:52:56,926 | INFO     | sum of square deviations: 43095796188.673775
[2025-11-26 08:53:41] 2025-11-26 13:52:56,932 | INFO     | sum of deviations: 4792279211987.171
[2025-11-26 08:53:41] 2025-11-26 13:52:56,932 | INFO     | mean x: 1764149079.0250964
[2025-11-26 08:53:41] 2025-11-26 13:52:56,932 | INFO     | mean y: 7468625.602316602
[2025-11-26 08:53:41] 2025-11-26 13:52:56,932 | INFO     | intersect: -196167000950.16104
[2025-11-26 08:53:41] 2025-11-26 13:52:56,933 | INFO     | chi2: 11.879392329769766
[2025-11-26 08:53:41] 2025-11-26 13:52:56,933 | INFO     | current chi2=11.879392329769766 (change=28.128255905454107 %)
[2025-11-26 08:53:41] 2025-11-26 13:52:56,933 | INFO     | sum of square deviations: 41859846669.78195
[2025-11-26 08:53:41] 2025-11-26 13:52:56,938 | INFO     | sum of deviations: 5085127372708.272
[2025-11-26 08:53:41] 2025-11-26 13:52:56,939 | INFO     | mean x: 1764148926.5302143
[2025-11-26 08:53:41] 2025-11-26 13:52:56,939 | INFO     | mean y: 7504723.918128655
[2025-11-26 08:53:41] 2025-11-26 13:52:56,939 | INFO     | intersect: -214301020259.4926
[2025-11-26 08:53:41] 2025-11-26 13:52:56,939 | INFO     | chi2: 9.862855510093677
[2025-11-26 08:53:41] 2025-11-26 13:52:56,939 | INFO     | current chi2=9.862855510093677 (change=16.97508394114273 %)
[2025-11-26 08:53:41] 2025-11-26 13:52:56,939 | INFO     | right removable region: 512
[2025-11-26 08:53:41] 2025-11-26 13:52:56,940 | INFO     | sum of square deviations: 43095630268.67378
[2025-11-26 08:53:41] 2025-11-26 13:52:56,945 | INFO     | sum of deviations: 3712468357824.11
[2025-11-26 08:53:41] 2025-11-26 13:52:56,945 | INFO     | mean x: 1764149384.0250964
[2025-11-26 08:53:41] 2025-11-26 13:52:56,945 | INFO     | mean y: 7472908.915057915
[2025-11-26 08:53:41] 2025-11-26 13:52:56,946 | INFO     | intersect: -151964982902.42938
[2025-11-26 08:53:41] 2025-11-26 13:52:56,946 | INFO     | chi2: 12.304832171822703
[2025-11-26 08:53:41] 2025-11-26 13:52:56,946 | INFO     | current chi2=12.304832171822703 (change=25.554293988309034 %)
[2025-11-26 08:53:41] 2025-11-26 13:52:56,947 | INFO     | sum of square deviations: 41859609623.94525
[2025-11-26 08:53:41] 2025-11-26 13:52:56,952 | INFO     | sum of deviations: 3449046960215.33
[2025-11-26 08:53:41] 2025-11-26 13:52:56,952 | INFO     | mean x: 1764149536.5243664
[2025-11-26 08:53:41] 2025-11-26 13:52:56,952 | INFO     | mean y: 7505356.333333333
[2025-11-26 08:53:41] 2025-11-26 13:52:56,952 | INFO     | intersect: -145350625093.9328
[2025-11-26 08:53:41] 2025-11-26 13:52:56,953 | INFO     | chi2: 11.565610349632058
[2025-11-26 08:53:41] 2025-11-26 13:52:56,953 | INFO     | current chi2=11.565610349632058 (change=6.007573381483551 %)
[2025-11-26 08:53:41] 2025-11-26 13:52:56,953 | INFO     | left removable region: 20
[2025-11-26 08:53:41] 2025-11-26 13:52:56,953 | INFO     | sum of square deviations: 36926448118.65659
[2025-11-26 08:53:41] 2025-11-26 13:52:56,958 | INFO     | sum of deviations: 3922411009740.934
[2025-11-26 08:53:41] 2025-11-26 13:52:56,958 | INFO     | mean x: 1764149506.0264227
[2025-11-26 08:53:41] 2025-11-26 13:52:56,958 | INFO     | mean y: 7665710.235772357
[2025-11-26 08:53:41] 2025-11-26 13:52:56,958 | INFO     | intersect: -187384293111.03452
[2025-11-26 08:53:41] 2025-11-26 13:52:56,959 | INFO     | chi2: 4.3691415938543505
[2025-11-26 08:53:41] 2025-11-26 13:52:56,959 | INFO     | current memory leak: 106.22 B/s (using 492 data points, chi2=4.37)
[2025-11-26 08:53:41] 2025-11-26 13:52:56,960 | INFO     | could have reported an average CPU frequency of 3371 MHz (21 samples)
[2025-11-26 08:53:41] 2025-11-26 13:52:56,960 | INFO     | ..............................
[2025-11-26 08:53:41] 2025-11-26 13:52:56,960 | INFO     | . Timing measurements:
[2025-11-26 08:53:41] 2025-11-26 13:52:56,960 | INFO     | . get job = 0 s
[2025-11-26 08:53:41] 2025-11-26 13:52:56,960 | INFO     | . initial setup = 4 s
[2025-11-26 08:53:41] 2025-11-26 13:52:56,960 | INFO     | . payload setup = 21 s
[2025-11-26 08:53:41] 2025-11-26 13:52:56,960 | INFO     | . stage-in = 0 s
[2025-11-26 08:53:41] 2025-11-26 13:52:56,960 | INFO     | . payload execution = 31866 s
[2025-11-26 08:53:41] 2025-11-26 13:52:56,960 | INFO     | . stage-out = 2 s
[2025-11-26 08:53:41] 2025-11-26 13:52:56,960 | INFO     | . log creation = 0 s
[2025-11-26 08:53:41] 2025-11-26 13:52:56,960 | INFO     | ..............................
[2025-11-26 08:53:41] 2025-11-26 13:52:57,035 | INFO     | 
[2025-11-26 08:53:41] 2025-11-26 13:52:57,035 | INFO     | job summary report
[2025-11-26 08:53:41] 2025-11-26 13:52:57,035 | INFO     | --------------------------------------------------
[2025-11-26 08:53:41] 2025-11-26 13:52:57,035 | INFO     | PanDA job id: 6893846330
[2025-11-26 08:53:41] 2025-11-26 13:52:57,035 | INFO     | task id: 47523449
[2025-11-26 08:53:41] 2025-11-26 13:52:57,036 | INFO     | errors: (none)
[2025-11-26 08:53:41] 2025-11-26 13:52:57,036 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 08:53:41] 2025-11-26 13:52:57,036 | INFO     | pilot state: finished 
[2025-11-26 08:53:41] 2025-11-26 13:52:57,036 | INFO     | transexitcode: 0
[2025-11-26 08:53:41] 2025-11-26 13:52:57,036 | INFO     | exeerrorcode: 0
[2025-11-26 08:53:41] 2025-11-26 13:52:57,036 | INFO     | exeerrordiag: 
[2025-11-26 08:53:41] 2025-11-26 13:52:57,036 | INFO     | exitcode: 0
[2025-11-26 08:53:41] 2025-11-26 13:52:57,036 | INFO     | exitmsg: OK
[2025-11-26 08:53:41] 2025-11-26 13:52:57,036 | INFO     | cpuconsumptiontime: 190486 s
[2025-11-26 08:53:41] 2025-11-26 13:52:57,036 | INFO     | nevents: 1000
[2025-11-26 08:53:41] 2025-11-26 13:52:57,036 | INFO     | neventsw: 0
[2025-11-26 08:53:41] 2025-11-26 13:52:57,036 | INFO     | pid: 176960
[2025-11-26 08:53:41] 2025-11-26 13:52:57,036 | INFO     | pgrp: 176960
[2025-11-26 08:53:41] 2025-11-26 13:52:57,036 | INFO     | corecount: 9
[2025-11-26 08:53:41] 2025-11-26 13:52:57,037 | INFO     | event service: False
[2025-11-26 08:53:41] 2025-11-26 13:52:57,037 | INFO     | sizes: {0: 2284144, 1: 2284343, 11: 2284343, 12: 2284633, 22: 2284661, 31891: 2325539, 31895: 2334533, 31896: 2334589, 31901: 2334835}
[2025-11-26 08:53:41] 2025-11-26 13:52:57,037 | INFO     | --------------------------------------------------
[2025-11-26 08:53:41] 2025-11-26 13:52:57,037 | INFO     | 
[2025-11-26 08:53:41] 2025-11-26 13:52:57,037 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-11-26 08:53:41] 2025-11-26 13:52:57,058 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 08:53:41] 2025-11-26 13:52:57,059 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 08:53:41] 2025-11-26 13:52:57,059 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 08:53:41] 2025-11-26 13:52:57,059 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 08:53:41] 2025-11-26 13:52:57,059 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 08:53:41] 2025-11-26 13:52:57,059 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 08:53:41] 2025-11-26 13:52:57,059 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 08:53:41] 2025-11-26 13:52:57,059 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 08:53:41] 2025-11-26 13:52:57,059 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 08:53:41] 2025-11-26 13:52:57,059 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 08:53:41] 2025-11-26 13:52:57,059 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 08:53:41] 2025-11-26 13:52:57,059 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 08:53:41] 2025-11-26 13:52:57,059 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 08:53:41] 2025-11-26 13:52:57,059 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 08:53:41] 2025-11-26 13:52:57,060 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 08:53:41] 2025-11-26 13:52:57,060 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 08:53:41] 2025-11-26 13:52:57,060 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 08:53:41] 2025-11-26 13:52:57,060 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 08:53:41] 2025-11-26 13:52:57,060 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 08:53:41] 2025-11-26 13:52:57,060 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 08:53:41] 2025-11-26 13:52:57,060 | INFO     | job 6893846330 has completed (purged errors)
[2025-11-26 08:53:41] 2025-11-26 13:52:57,060 | INFO     | overall cleanup function is called
[2025-11-26 08:53:41] 2025-11-26 13:52:58,096 | INFO     | --- collectZombieJob: --- 10, [176960]
[2025-11-26 08:53:41] 2025-11-26 13:52:58,096 | INFO     | zombie collector waiting for pid 176960
[2025-11-26 08:53:41] 2025-11-26 13:52:58,096 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 08:53:41] 2025-11-26 13:52:58,096 | INFO     | collected zombie processes
[2025-11-26 08:53:41] 2025-11-26 13:52:58,096 | INFO     | will attempt to kill all subprocesses of pid=176960
[2025-11-26 08:53:41] 2025-11-26 13:52:58,744 | INFO     | process IDs to be killed: [176960] (in reverse order)
[2025-11-26 08:53:41] 2025-11-26 13:52:58,953 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 08:53:41] 2025-11-26 13:52:58,953 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 08:53:41] 2025-11-26 13:52:58,984 | INFO     | did not find any defunct processes belonging to 176960
[2025-11-26 08:53:41] 2025-11-26 13:52:59,015 | INFO     | did not find any defunct processes belonging to 176960
[2025-11-26 08:53:41] 2025-11-26 13:52:59,016 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 08:53:41] 2025-11-26 13:52:59,016 | INFO     | ready for new job
[2025-11-26 08:53:41] 2025-11-26 13:52:59,016 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 08:53:41] 2025-11-26 13:52:59,019 | INFO     | ***************************************
[2025-11-26 08:53:41] 2025-11-26 13:52:59,024 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 08:53:41] 2025-11-26 13:52:59,024 | INFO     | ***************************************
[2025-11-26 08:53:41] 2025-11-26 13:52:59,024 | INFO     | 
[2025-11-26 08:53:41] 2025-11-26 13:52:59,029 | INFO     | architecture information:
[2025-11-26 08:53:41] 2025-11-26 13:52:59,029 | INFO     | executing command: cat /etc/os-release
[2025-11-26 08:53:41] 2025-11-26 13:52:59,041 | INFO     | cat /etc/os-release:
[2025-11-26 08:53:41] NAME="CentOS Linux"
[2025-11-26 08:53:41] VERSION="7 (Core)"
[2025-11-26 08:53:41] ID="centos"
[2025-11-26 08:53:41] ID_LIKE="rhel fedora"
[2025-11-26 08:53:41] VERSION_ID="7"
[2025-11-26 08:53:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 08:53:41] ANSI_COLOR="0;31"
[2025-11-26 08:53:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 08:53:41] HOME_URL="https://www.centos.org/"
[2025-11-26 08:53:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 08:53:41] 
[2025-11-26 08:53:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 08:53:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 08:53:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 08:53:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 08:53:41] 
[2025-11-26 08:53:41] 2025-11-26 13:52:59,041 | INFO     | ***************************************
[2025-11-26 08:53:41] 2025-11-26 13:52:59,543 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-11-26 08:53:41] 2025-11-26 13:52:59,561 | INFO     | sufficient remaining disk space (67583868928 B)
[2025-11-26 08:53:41] 2025-11-26 13:52:59,561 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 08:53:41] 2025-11-26 13:52:59,561 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 08:53:41] 2025-11-26 13:52:59,561 | INFO     | update_server=False
[2025-11-26 08:53:41] 2025-11-26 13:52:59,561 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 08:53:41] 2025-11-26 13:52:59,562 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 08:53:41] 2025-11-26 13:52:59,562 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 08:53:41] 2025-11-26 13:53:00,245 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:53:41] 2025-11-26 13:53:00,245 | INFO     | aborting loop
[2025-11-26 08:53:41] 2025-11-26 13:53:00,458 | INFO     | all data control threads have been joined
[2025-11-26 08:53:41] 2025-11-26 13:53:00,559 | INFO     | all payload control threads have been joined
[2025-11-26 08:53:41] 2025-11-26 13:53:00,566 | INFO     | [job] retrieve thread has finished
[2025-11-26 08:53:41] 2025-11-26 13:53:00,645 | INFO     | all job control threads have been joined
[2025-11-26 08:53:41] 2025-11-26 13:53:00,729 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 08:53:41] 2025-11-26 13:53:00,731 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 08:53:41] 2025-11-26 13:53:00,882 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 08:53:41] 2025-11-26 13:53:01,001 | INFO     | [payload] failed_post thread has finished
[2025-11-26 08:53:41] 2025-11-26 13:53:01,090 | INFO     | [data] copytool_in thread has finished
[2025-11-26 08:53:41] 2025-11-26 13:53:01,249 | INFO     | [job] job monitor thread has finished
[2025-11-26 08:53:41] 2025-11-26 13:53:01,421 | INFO     | [payload] validate_post thread has finished
[2025-11-26 08:53:41] 2025-11-26 13:53:01,463 | INFO     | [data] control thread has finished
[2025-11-26 08:53:41] 2025-11-26 13:53:01,564 | INFO     | [payload] control thread has finished
[2025-11-26 08:53:41] 2025-11-26 13:53:01,567 | INFO     | [data] copytool_out thread has finished
[2025-11-26 08:53:41] 2025-11-26 13:53:01,642 | INFO     | [job] validate thread has finished
[2025-11-26 08:53:41] 2025-11-26 13:53:01,650 | INFO     | [job] control thread has finished
[2025-11-26 08:53:41] 2025-11-26 13:53:01,653 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 08:53:41] 2025-11-26 13:53:02,052 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:53:41] 2025-11-26 13:53:03,057 | INFO     | [job] queue monitor thread has finished
[2025-11-26 08:53:41] 2025-11-26 13:53:03,568 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 08:53:41] 2025-11-26 13:53:29,129 | INFO     | PID=160886 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 08:53:41] 2025-11-26 13:53:29,130 | INFO     | .. there are 81 such processes running
[2025-11-26 08:53:41] 2025-11-26 13:53:29,130 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 08:53:41] 2025-11-26 13:53:29,130 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 08:53:41] 2025-11-26 13:53:29,131 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 08:53:41] 2025-11-26 13:53:34,730 | INFO     | [monitor] cgroup control has ended
[2025-11-26 08:53:41] 2025-11-26 13:53:36,113 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140077084845888)>', '<ExcThread(monitor, started 140076812048128)>']
[2025-11-26 08:53:41] 2025-11-26 13:53:36,183 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 08:53:41] 2025-11-26 13:53:36,184 | INFO     | [monitor] control thread has ended
[2025-11-26 08:53:41] 2025-11-26 13:53:41,139 | INFO     | all workflow threads have been joined
[2025-11-26 08:53:41] 2025-11-26 13:53:41,139 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 08:53:41] 2025-11-26 13:53:41,144 | INFO     | traces error code: 0
[2025-11-26 08:53:41] 2025-11-26 13:53:41,146 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 08:53:41] 2025-11-26 13:53:41,313 [wrapper] ==== pilot stdout END ====
[2025-11-26 08:53:41] 2025-11-26 13:53:41,315 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 08:53:41] 2025-11-26 13:53:41,317 [wrapper] pilotpid: 160886
[2025-11-26 08:53:41] 2025-11-26 13:53:41,319 [wrapper] Pilot exit status: 0
[2025-11-26 08:53:41] 2025-11-26 13:53:41,369 [wrapper] pandaids: 6893846330
[2025-11-26 08:53:41] 2025-11-26 13:53:41,510 [wrapper] cleanup supervisor_pilot  884789 160887
[2025-11-26 08:53:41] 2025-11-26 13:53:41,513 [wrapper] Test setup, not cleaning
[2025-11-26 08:53:41] 2025-11-26 13:53:41,516 [wrapper] apfmon messages muted
[2025-11-26 08:53:41] 2025-11-26 13:53:41,519 [wrapper] ==== wrapper stdout END ====
[2025-11-26 08:53:41] 2025-11-26 13:53:41,522 [wrapper] ==== wrapper stderr END ====
[2025-11-26 08:53:41]  *** Error codes and diagnostics ***
[2025-11-26 08:53:41]     "exeErrorCode": 0,
[2025-11-26 08:53:41]     "exeErrorDiag": "",
[2025-11-26 08:53:41]     "pilotErrorCode": 0,
[2025-11-26 08:53:41]     "pilotErrorDiag": "",
[2025-11-26 08:53:41]  *** Listing of results directory ***
[2025-11-26 08:53:41] total 1320236
[2025-11-26 08:53:41] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 05:06 pilot3.tar.gz
[2025-11-26 08:53:41] -rwx------. 1 boincer umatlas     36292 Nov 20 05:23 runpilot2-wrapper.sh
[2025-11-26 08:53:41] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 05:25 queuedata.json
[2025-11-26 08:53:41] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 08:53:41] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:00 run_atlas
[2025-11-26 08:53:41] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:00 job.xml
[2025-11-26 08:53:41] -rw-r--r--. 2 boincer umatlas 410647630 Nov 26 00:00 EVNT.47493127._000222.pool.root.1
[2025-11-26 08:53:41] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:00 start_atlas.sh
[2025-11-26 08:53:41] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:00 shared
[2025-11-26 08:53:41] -rw-r--r--. 2 boincer umatlas    590097 Nov 26 00:00 input.tar.gz
[2025-11-26 08:53:41] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:00 boinc_lockfile
[2025-11-26 08:53:41] -rw-r--r--. 1 boincer umatlas      2786 Nov 26 00:00 pandaJob.out
[2025-11-26 08:53:41] -rw-------. 1 boincer umatlas        57 Nov 26 00:00 setup.sh.local
[2025-11-26 08:53:41] -rw-------. 1 boincer umatlas    991877 Nov 26 00:00 agis_schedconf.cvmfs.json
[2025-11-26 08:53:41] drwx------. 5 boincer umatlas      4096 Nov 26 00:00 pilot3
[2025-11-26 08:53:41] -rw-r--r--. 1 boincer umatlas       532 Nov 26 08:40 boinc_task_state.xml
[2025-11-26 08:53:41] -rw-r--r--. 1 boincer umatlas      6946 Nov 26 08:47 init_data.xml
[2025-11-26 08:53:41] -rw-------. 1 boincer umatlas 925022168 Nov 26 08:52 HITS.47523449._002212.pool.root.1
[2025-11-26 08:53:41] -rw-------. 1 boincer umatlas      1076 Nov 26 08:52 memory_monitor_summary.json
[2025-11-26 08:53:41] -rw-------. 1 boincer umatlas   1516240 Nov 26 08:52 agis_ddmendpoints.agis.ALL.json
[2025-11-26 08:53:41] -rw-------. 1 boincer umatlas   1919699 Nov 26 08:52 log.47523449._002212.job.log.tgz.1
[2025-11-26 08:53:41] -rw-------. 1 boincer umatlas      8646 Nov 26 08:52 heartbeat.json
[2025-11-26 08:53:41] -rw-------. 1 boincer umatlas        95 Nov 26 08:53 pilot_heartbeat.json
[2025-11-26 08:53:41] -rw-r--r--. 1 boincer umatlas        29 Nov 26 08:53 wrapper_checkpoint.txt
[2025-11-26 08:53:41] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 08:53 boinc_mmap_file
[2025-11-26 08:53:41] -rw-------. 1 boincer umatlas      4823 Nov 26 08:53 pilotlog.txt
[2025-11-26 08:53:41] -rw-------. 1 boincer umatlas   4246377 Nov 26 08:53 log.47523449._002212.job.log.1
[2025-11-26 08:53:41] -rw-------. 1 boincer umatlas       353 Nov 26 08:53 output.list
[2025-11-26 08:53:41] -rw-r--r--. 1 boincer umatlas       620 Nov 26 08:53 runtime_log
[2025-11-26 08:53:41] -rw-------. 1 boincer umatlas   6184960 Nov 26 08:53 result.tar.gz
[2025-11-26 08:53:41] -rw-------. 1 boincer umatlas       665 Nov 26 08:53 v8MKDmqzGg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTQHKDmPb5gGo.diag
[2025-11-26 08:53:41] -rw-r--r--. 1 boincer umatlas      9338 Nov 26 08:53 runtime_log.err
[2025-11-26 08:53:41] -rw-r--r--. 1 boincer umatlas     21321 Nov 26 08:53 stderr.txt
[2025-11-26 08:53:41] HITS file was successfully produced:
[2025-11-26 08:53:41] -rw-------. 1 boincer umatlas 925022168 Nov 26 08:52 shared/HITS.pool.root.1
[2025-11-26 08:53:41]  *** Contents of shared directory: ***
[2025-11-26 08:53:41] total 1311012
[2025-11-26 08:53:41] -rw-r--r--. 2 boincer umatlas 410647630 Nov 26 00:00 ATLAS.root_0
[2025-11-26 08:53:41] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:00 start_atlas.sh
[2025-11-26 08:53:41] -rw-r--r--. 2 boincer umatlas    590097 Nov 26 00:00 input.tar.gz
[2025-11-26 08:53:41] -rw-------. 1 boincer umatlas 925022168 Nov 26 08:52 HITS.pool.root.1
[2025-11-26 08:53:41] -rw-------. 1 boincer umatlas   6184960 Nov 26 08:53 result.tar.gz
08:53:43 (152239): run_atlas exited; CPU time 191072.263741
08:53:43 (152239): called boinc_finish(0)

</stderr_txt>
]]>

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