Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:49:05 (15395): wrapper (7.7.26015): starting
13:49:05 (15395): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 13:49:05] Arguments: --nthreads 8
[2025-11-25 13:49:05] Threads: 8
[2025-11-25 13:49:05] Checking for CVMFS
[2025-11-25 13:49:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 13:49:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 13:49:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 13:49:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 13:49:06] 2.11.2.0 2840 66576 81832 153293 0 81 17790017 20275201 1 130560 0 17363239 99.818 4488066 26737 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 13:49:06] CVMFS is ok
[2025-11-25 13:49:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 13:49:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 13:49:06] Further information can be found at the LHC@home message board.
[2025-11-25 13:49:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 13:49:06] Checking for apptainer binary...
[2025-11-25 13:49:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 13:49:06] Running /usr/bin/apptainer --version
[2025-11-25 13:49:06] apptainer version 1.3.2-1.el7
[2025-11-25 13:49:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 13:49:07] c-204-39.aglt2.org
[2025-11-25 13:49:07] apptainer works
[2025-11-25 13:49:07] Set ATHENA_PROC_NUMBER=8
[2025-11-25 13:49:07] Set ATHENA_CORE_NUMBER=8
[2025-11-25 13:49:07] Starting ATLAS job with PandaID=6896242960
[2025-11-25 13:49:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 02:19:44]  *** The last 200 lines of the pilot log: ***
[2025-11-26 02:19:44] 2025-11-26 07:18:44,990 | INFO     | time since job start (44959s) is within the limit (172800.0s)
[2025-11-26 02:19:44] 2025-11-26 07:18:45,249 | INFO     | monitor loop #3311: job 0:6896242960 is in state 'finished'
[2025-11-26 02:19:44] 2025-11-26 07:18:45,249 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:19:44] 2025-11-26 07:18:46,573 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 02:19:44] 2025-11-26 07:18:46,577 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-11-26 02:19:44] 2025-11-26 07:18:46,579 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896242960/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 02:19:44] 2025-11-26 07:18:46,580 | INFO     | extracted standard info from prmon json
[2025-11-26 02:19:44] 2025-11-26 07:18:46,580 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 02:19:44] 2025-11-26 07:18:46,580 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 02:19:44] 2025-11-26 07:18:46,594 | INFO     | fitting pss+swap vs Time
[2025-11-26 02:19:44] 2025-11-26 07:18:46,594 | INFO     | sum of square deviations: 124131170361.78514
[2025-11-26 02:19:44] 2025-11-26 07:18:46,606 | INFO     | sum of deviations: 804931514583.5521
[2025-11-26 02:19:44] 2025-11-26 07:18:46,606 | INFO     | mean x: 1764119045.5251017
[2025-11-26 02:19:44] 2025-11-26 07:18:46,606 | INFO     | mean y: 2855713.3215739485
[2025-11-26 02:19:44] 2025-11-26 07:18:46,606 | INFO     | intersect: -11436616025.17553
[2025-11-26 02:19:44] 2025-11-26 07:18:46,607 | INFO     | chi2: 6.5986549865330595
[2025-11-26 02:19:44] 2025-11-26 07:18:46,608 | INFO     | sum of square deviations: 121621976230.397
[2025-11-26 02:19:44] 2025-11-26 07:18:46,620 | INFO     | sum of deviations: 1074374662272.9216
[2025-11-26 02:19:44] 2025-11-26 07:18:46,620 | INFO     | mean x: 1764118893.0286884
[2025-11-26 02:19:44] 2025-11-26 07:18:46,620 | INFO     | mean y: 2872090.908469945
[2025-11-26 02:19:44] 2025-11-26 07:18:46,620 | INFO     | intersect: -15580862844.598019
[2025-11-26 02:19:44] 2025-11-26 07:18:46,621 | INFO     | chi2: 2.8605964297210438
[2025-11-26 02:19:44] 2025-11-26 07:18:46,621 | INFO     | current chi2=2.8605964297210438 (change=56.64879531420986 %)
[2025-11-26 02:19:44] 2025-11-26 07:18:46,622 | INFO     | sum of square deviations: 119146829248.99031
[2025-11-26 02:19:44] 2025-11-26 07:18:46,633 | INFO     | sum of deviations: 1167155333024.9478
[2025-11-26 02:19:44] 2025-11-26 07:18:46,633 | INFO     | mean x: 1764118740.5323246
[2025-11-26 02:19:44] 2025-11-26 07:18:46,633 | INFO     | mean y: 2877801.1086657494
[2025-11-26 02:19:44] 2025-11-26 07:18:46,633 | INFO     | intersect: -17278325644.085033
[2025-11-26 02:19:44] 2025-11-26 07:18:46,634 | INFO     | chi2: 2.262527040941694
[2025-11-26 02:19:44] 2025-11-26 07:18:46,634 | INFO     | current chi2=2.262527040941694 (change=20.90715707275324 %)
[2025-11-26 02:19:44] 2025-11-26 07:18:46,634 | INFO     | right removable region: 726
[2025-11-26 02:19:44] 2025-11-26 07:18:46,635 | INFO     | sum of square deviations: 121621740160.39699
[2025-11-26 02:19:44] 2025-11-26 07:18:46,646 | INFO     | sum of deviations: 613935886820.7051
[2025-11-26 02:19:44] 2025-11-26 07:18:46,646 | INFO     | mean x: 1764119198.0286884
[2025-11-26 02:19:44] 2025-11-26 07:18:46,646 | INFO     | mean y: 2867301.1092896173
[2025-11-26 02:19:44] 2025-11-26 07:18:46,646 | INFO     | intersect: -8902251823.734835
[2025-11-26 02:19:44] 2025-11-26 07:18:46,647 | INFO     | chi2: 4.581187177135086
[2025-11-26 02:19:44] 2025-11-26 07:18:46,647 | INFO     | current chi2=4.581187177135086 (change=30.573924739440777 %)
[2025-11-26 02:19:44] 2025-11-26 07:18:46,648 | INFO     | sum of square deviations: 119146490821.17192
[2025-11-26 02:19:44] 2025-11-26 07:18:46,659 | INFO     | sum of deviations: 570845749084.8875
[2025-11-26 02:19:44] 2025-11-26 07:18:46,659 | INFO     | mean x: 1764119350.528198
[2025-11-26 02:19:44] 2025-11-26 07:18:46,659 | INFO     | mean y: 2869954.7372764787
[2025-11-26 02:19:44] 2025-11-26 07:18:46,659 | INFO     | intersect: -8449246638.76685
[2025-11-26 02:19:44] 2025-11-26 07:18:46,660 | INFO     | chi2: 4.5408982075075635
[2025-11-26 02:19:44] 2025-11-26 07:18:46,660 | INFO     | current chi2=4.5408982075075635 (change=0.8794438661796374 %)
[2025-11-26 02:19:44] 2025-11-26 07:18:46,660 | INFO     | left removable region: 20
[2025-11-26 02:19:44] 2025-11-26 07:18:46,661 | INFO     | sum of square deviations: 109117166879.04369
[2025-11-26 02:19:44] 2025-11-26 07:18:46,676 | INFO     | sum of deviations: 872746145327.2505
[2025-11-26 02:19:44] 2025-11-26 07:18:46,676 | INFO     | mean x: 1764119320.036827
[2025-11-26 02:19:44] 2025-11-26 07:18:46,676 | INFO     | mean y: 2897005.682719547
[2025-11-26 02:19:44] 2025-11-26 07:18:46,676 | INFO     | intersect: -14106966551.956638
[2025-11-26 02:19:44] 2025-11-26 07:18:46,677 | INFO     | chi2: 0.13751281958513145
[2025-11-26 02:19:44] 2025-11-26 07:18:46,677 | INFO     | current memory leak: 8.00 B/s (using 706 data points, chi2=0.14)
[2025-11-26 02:19:44] 2025-11-26 07:18:46,678 | INFO     | could have reported an average CPU frequency of 2175 MHz (28 samples)
[2025-11-26 02:19:44] 2025-11-26 07:18:46,678 | INFO     | ..............................
[2025-11-26 02:19:44] 2025-11-26 07:18:46,678 | INFO     | . Timing measurements:
[2025-11-26 02:19:44] 2025-11-26 07:18:46,678 | INFO     | . get job = 0 s
[2025-11-26 02:19:44] 2025-11-26 07:18:46,678 | INFO     | . initial setup = 2 s
[2025-11-26 02:19:44] 2025-11-26 07:18:46,678 | INFO     | . payload setup = 8 s
[2025-11-26 02:19:44] 2025-11-26 07:18:46,679 | INFO     | . stage-in = 0 s
[2025-11-26 02:19:44] 2025-11-26 07:18:46,679 | INFO     | . payload execution = 44916 s
[2025-11-26 02:19:44] 2025-11-26 07:18:46,679 | INFO     | . stage-out = 3 s
[2025-11-26 02:19:44] 2025-11-26 07:18:46,679 | INFO     | . log creation = 0 s
[2025-11-26 02:19:44] 2025-11-26 07:18:46,679 | INFO     | ..............................
[2025-11-26 02:19:44] 2025-11-26 07:18:46,768 | INFO     | 
[2025-11-26 02:19:44] 2025-11-26 07:18:46,768 | INFO     | job summary report
[2025-11-26 02:19:44] 2025-11-26 07:18:46,768 | INFO     | --------------------------------------------------
[2025-11-26 02:19:44] 2025-11-26 07:18:46,768 | INFO     | PanDA job id: 6896242960
[2025-11-26 02:19:44] 2025-11-26 07:18:46,769 | INFO     | task id: 47556173
[2025-11-26 02:19:44] 2025-11-26 07:18:46,769 | INFO     | errors: (none)
[2025-11-26 02:19:44] 2025-11-26 07:18:46,769 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 02:19:44] 2025-11-26 07:18:46,769 | INFO     | pilot state: finished 
[2025-11-26 02:19:44] 2025-11-26 07:18:46,769 | INFO     | transexitcode: 0
[2025-11-26 02:19:44] 2025-11-26 07:18:46,769 | INFO     | exeerrorcode: 0
[2025-11-26 02:19:44] 2025-11-26 07:18:46,770 | INFO     | exeerrordiag: 
[2025-11-26 02:19:44] 2025-11-26 07:18:46,770 | INFO     | exitcode: 0
[2025-11-26 02:19:44] 2025-11-26 07:18:46,770 | INFO     | exitmsg: OK
[2025-11-26 02:19:44] 2025-11-26 07:18:46,770 | INFO     | cpuconsumptiontime: 347484 s
[2025-11-26 02:19:44] 2025-11-26 07:18:46,770 | INFO     | nevents: 1000
[2025-11-26 02:19:44] 2025-11-26 07:18:46,770 | INFO     | neventsw: 0
[2025-11-26 02:19:44] 2025-11-26 07:18:46,771 | INFO     | pid: 25533
[2025-11-26 02:19:44] 2025-11-26 07:18:46,771 | INFO     | pgrp: 25533
[2025-11-26 02:19:44] 2025-11-26 07:18:46,771 | INFO     | corecount: 8
[2025-11-26 02:19:44] 2025-11-26 07:18:46,771 | INFO     | event service: False
[2025-11-26 02:19:44] 2025-11-26 07:18:46,771 | INFO     | sizes: {0: 2284035, 1: 2284290, 7: 2284552, 12: 2284580, 44929: 2330505, 44934: 2339499, 44937: 2339683, 44945: 2339929}
[2025-11-26 02:19:44] 2025-11-26 07:18:46,771 | INFO     | --------------------------------------------------
[2025-11-26 02:19:44] 2025-11-26 07:18:46,772 | INFO     | 
[2025-11-26 02:19:44] 2025-11-26 07:18:46,772 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 02:19:44] 2025-11-26 07:18:46,801 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 02:19:44] 2025-11-26 07:18:46,801 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 02:19:44] 2025-11-26 07:18:46,802 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 02:19:44] 2025-11-26 07:18:46,802 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 02:19:44] 2025-11-26 07:18:46,802 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 02:19:44] 2025-11-26 07:18:46,802 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 02:19:44] 2025-11-26 07:18:46,802 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 02:19:44] 2025-11-26 07:18:46,803 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 02:19:44] 2025-11-26 07:18:46,803 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 02:19:44] 2025-11-26 07:18:46,803 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 02:19:44] 2025-11-26 07:18:46,803 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 02:19:44] 2025-11-26 07:18:46,803 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 02:19:44] 2025-11-26 07:18:46,804 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 02:19:44] 2025-11-26 07:18:46,804 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 02:19:44] 2025-11-26 07:18:46,804 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 02:19:44] 2025-11-26 07:18:46,804 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 02:19:44] 2025-11-26 07:18:46,804 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 02:19:44] 2025-11-26 07:18:46,804 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 02:19:44] 2025-11-26 07:18:46,805 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 02:19:44] 2025-11-26 07:18:46,805 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 02:19:44] 2025-11-26 07:18:46,805 | INFO     | job 6896242960 has completed (purged errors)
[2025-11-26 02:19:44] 2025-11-26 07:18:46,805 | INFO     | overall cleanup function is called
[2025-11-26 02:19:44] 2025-11-26 07:18:47,819 | INFO     | --- collectZombieJob: --- 10, [25533]
[2025-11-26 02:19:44] 2025-11-26 07:18:47,819 | INFO     | zombie collector waiting for pid 25533
[2025-11-26 02:19:44] 2025-11-26 07:18:47,819 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 02:19:44] 2025-11-26 07:18:47,820 | INFO     | collected zombie processes
[2025-11-26 02:19:44] 2025-11-26 07:18:47,820 | INFO     | will attempt to kill all subprocesses of pid=25533
[2025-11-26 02:19:44] 2025-11-26 07:18:47,909 | INFO     | process IDs to be killed: [25533] (in reverse order)
[2025-11-26 02:19:44] 2025-11-26 07:18:47,969 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 02:19:44] 2025-11-26 07:18:47,969 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 02:19:44] 2025-11-26 07:18:47,974 | INFO     | did not find any defunct processes belonging to 25533
[2025-11-26 02:19:44] 2025-11-26 07:18:47,977 | INFO     | did not find any defunct processes belonging to 25533
[2025-11-26 02:19:44] 2025-11-26 07:18:47,979 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 02:19:44] 2025-11-26 07:18:47,980 | INFO     | ready for new job
[2025-11-26 02:19:44] 2025-11-26 07:18:47,980 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 02:19:44] 2025-11-26 07:18:47,983 | INFO     | ***************************************
[2025-11-26 02:19:44] 2025-11-26 07:18:47,983 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 02:19:44] 2025-11-26 07:18:47,983 | INFO     | ***************************************
[2025-11-26 02:19:44] 2025-11-26 07:18:47,983 | INFO     | 
[2025-11-26 02:19:44] 2025-11-26 07:18:47,984 | INFO     | architecture information:
[2025-11-26 02:19:44] 2025-11-26 07:18:47,985 | INFO     | executing command: cat /etc/os-release
[2025-11-26 02:19:44] 2025-11-26 07:18:48,002 | INFO     | cat /etc/os-release:
[2025-11-26 02:19:44] NAME="CentOS Linux"
[2025-11-26 02:19:44] VERSION="7 (Core)"
[2025-11-26 02:19:44] ID="centos"
[2025-11-26 02:19:44] ID_LIKE="rhel fedora"
[2025-11-26 02:19:44] VERSION_ID="7"
[2025-11-26 02:19:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 02:19:44] ANSI_COLOR="0;31"
[2025-11-26 02:19:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 02:19:44] HOME_URL="https://www.centos.org/"
[2025-11-26 02:19:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 02:19:44] 
[2025-11-26 02:19:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 02:19:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 02:19:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 02:19:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 02:19:44] 
[2025-11-26 02:19:44] 2025-11-26 07:18:48,003 | INFO     | ***************************************
[2025-11-26 02:19:44] 2025-11-26 07:18:48,506 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 02:19:44] 2025-11-26 07:18:48,526 | INFO     | sufficient remaining disk space (17456693248 B)
[2025-11-26 02:19:44] 2025-11-26 07:18:48,527 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 02:19:44] 2025-11-26 07:18:48,527 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 02:19:44] 2025-11-26 07:18:48,528 | INFO     | update_server=False
[2025-11-26 02:19:44] 2025-11-26 07:18:48,528 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 02:19:44] 2025-11-26 07:18:48,528 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 02:19:44] 2025-11-26 07:18:48,623 | INFO     | all payload control threads have been joined
[2025-11-26 02:19:44] 2025-11-26 07:18:48,758 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 02:19:44] 2025-11-26 07:18:48,758 | INFO     | aborting loop
[2025-11-26 02:19:44] 2025-11-26 07:18:48,829 | INFO     | all data control threads have been joined
[2025-11-26 02:19:44] 2025-11-26 07:18:48,883 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 02:19:44] 2025-11-26 07:18:49,223 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 02:19:44] 2025-11-26 07:18:49,534 | INFO     | [job] retrieve thread has finished
[2025-11-26 02:19:44] 2025-11-26 07:18:49,534 | INFO     | [job] queue monitor thread has finished
[2025-11-26 02:19:44] 2025-11-26 07:18:49,629 | INFO     | [payload] control thread has finished
[2025-11-26 02:19:44] 2025-11-26 07:18:49,634 | INFO     | all job control threads have been joined
[2025-11-26 02:19:44] 2025-11-26 07:18:49,675 | INFO     | [payload] validate_post thread has finished
[2025-11-26 02:19:44] 2025-11-26 07:18:49,763 | INFO     | [job] job monitor thread has finished
[2025-11-26 02:19:44] 2025-11-26 07:18:49,835 | INFO     | [data] control thread has finished
[2025-11-26 02:19:44] 2025-11-26 07:18:49,921 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 02:19:44] 2025-11-26 07:18:50,068 | INFO     | [job] validate thread has finished
[2025-11-26 02:19:44] 2025-11-26 07:18:50,149 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 02:19:44] 2025-11-26 07:18:50,341 | INFO     | [payload] failed_post thread has finished
[2025-11-26 02:19:44] 2025-11-26 07:18:50,640 | INFO     | [job] control thread has finished
[2025-11-26 02:19:44] 2025-11-26 07:18:50,767 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 02:19:44] 2025-11-26 07:18:50,788 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 02:19:44] 2025-11-26 07:18:50,889 | INFO     | [data] copytool_out thread has finished
[2025-11-26 02:19:44] 2025-11-26 07:18:50,910 | INFO     | [data] copytool_in thread has finished
[2025-11-26 02:19:44] 2025-11-26 07:18:53,229 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 02:19:44] 2025-11-26 07:19:18,206 | INFO     | PID=19142 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 02:19:44] 2025-11-26 07:19:18,207 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 02:19:44] 2025-11-26 07:19:18,207 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 02:19:44] 2025-11-26 07:19:18,207 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 02:19:44] 2025-11-26 07:19:29,160 [wrapper] supervise_pilot (15 min periods counter: 51)
[2025-11-26 02:19:44] 2025-11-26 07:19:39,274 | INFO     | [monitor] cgroup control has ended
[2025-11-26 02:19:44] 2025-11-26 07:19:39,545 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140606424966976)>', '<ExcThread(monitor, started 140605594257152)>']
[2025-11-26 02:19:44] 2025-11-26 07:19:40,310 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 02:19:44] 2025-11-26 07:19:40,310 | INFO     | [monitor] control thread has ended
[2025-11-26 02:19:44] 2025-11-26 07:19:44,571 | INFO     | all workflow threads have been joined
[2025-11-26 02:19:44] 2025-11-26 07:19:44,571 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 02:19:44] 2025-11-26 07:19:44,571 | INFO     | traces error code: 0
[2025-11-26 02:19:44] 2025-11-26 07:19:44,572 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 02:19:44] 2025-11-26 07:19:44,688 [wrapper] ==== pilot stdout END ====
[2025-11-26 02:19:44] 2025-11-26 07:19:44,693 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 02:19:44] 2025-11-26 07:19:44,697 [wrapper] pilotpid: 19142
[2025-11-26 02:19:44] 2025-11-26 07:19:44,703 [wrapper] Pilot exit status: 0
[2025-11-26 02:19:44] 2025-11-26 07:19:44,720 [wrapper] pandaids: 6896242960
[2025-11-26 02:19:44] 2025-11-26 07:19:44,769 [wrapper] cleanup supervisor_pilot 12303 19143
[2025-11-26 02:19:44] 2025-11-26 07:19:44,775 [wrapper] Test setup, not cleaning
[2025-11-26 02:19:44] 2025-11-26 07:19:44,779 [wrapper] apfmon messages muted
[2025-11-26 02:19:44] 2025-11-26 07:19:44,785 [wrapper] ==== wrapper stdout END ====
[2025-11-26 02:19:44] 2025-11-26 07:19:44,790 [wrapper] ==== wrapper stderr END ====
[2025-11-26 02:19:44]  *** Error codes and diagnostics ***
[2025-11-26 02:19:44]     "exeErrorCode": 0,
[2025-11-26 02:19:44]     "exeErrorDiag": "",
[2025-11-26 02:19:44]     "pilotErrorCode": 0,
[2025-11-26 02:19:44]     "pilotErrorDiag": "",
[2025-11-26 02:19:44]  *** Listing of results directory ***
[2025-11-26 02:19:44] total 1299992
[2025-11-26 02:19:44] -rwx------ 1 boincer umatlas     36292 Nov 24 16:08 runpilot2-wrapper.sh
[2025-11-26 02:19:44] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 16:08 queuedata.json
[2025-11-26 02:19:44] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 16:08 pilot3.tar.gz
[2025-11-26 02:19:44] -rw-r--r-- 1 boincer umatlas       100 Nov 25 13:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 02:19:44] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 13:49 run_atlas
[2025-11-26 02:19:44] -rw-r--r-- 1 boincer umatlas       105 Nov 25 13:49 job.xml
[2025-11-26 02:19:44] -rw-r--r-- 2 boincer umatlas 408179219 Nov 25 13:49 EVNT.47483658._003057.pool.root.1
[2025-11-26 02:19:44] drwxrwx--x 2 boincer umatlas      4096 Nov 25 13:49 shared
[2025-11-26 02:19:44] -rw-r--r-- 2 boincer umatlas    590103 Nov 25 13:49 input.tar.gz
[2025-11-26 02:19:44] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 13:49 start_atlas.sh
[2025-11-26 02:19:44] -rw-r--r-- 1 boincer umatlas         0 Nov 25 13:49 boinc_lockfile
[2025-11-26 02:19:44] -rw-r--r-- 1 boincer umatlas      2784 Nov 25 13:49 pandaJob.out
[2025-11-26 02:19:44] -rw------- 1 boincer umatlas        57 Nov 25 13:49 setup.sh.local
[2025-11-26 02:19:44] -rw------- 1 boincer umatlas    991543 Nov 25 13:49 agis_schedconf.cvmfs.json
[2025-11-26 02:19:44] drwx------ 5 boincer umatlas      4096 Nov 25 13:49 pilot3
[2025-11-26 02:19:44] -rw-r--r-- 1 boincer umatlas       533 Nov 26 02:06 boinc_task_state.xml
[2025-11-26 02:19:44] -rw-r--r-- 1 boincer umatlas      5913 Nov 26 02:13 init_data.xml
[2025-11-26 02:19:44] -rw------- 1 boincer umatlas 902747796 Nov 26 02:17 HITS.47556173._000400.pool.root.1
[2025-11-26 02:19:44] -rw------- 1 boincer umatlas        95 Nov 26 02:18 pilot_heartbeat.json
[2025-11-26 02:19:44] -rw------- 1 boincer umatlas      1063 Nov 26 02:18 memory_monitor_summary.json
[2025-11-26 02:19:44] -rw------- 1 boincer umatlas   1516240 Nov 26 02:18 agis_ddmendpoints.agis.ALL.json
[2025-11-26 02:19:44] -rw------- 1 boincer umatlas   1981354 Nov 26 02:18 log.47556173._000400.job.log.tgz.1
[2025-11-26 02:19:44] -rw------- 1 boincer umatlas      8658 Nov 26 02:18 heartbeat.json
[2025-11-26 02:19:44] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 02:19 boinc_mmap_file
[2025-11-26 02:19:44] -rw-r--r-- 1 boincer umatlas        29 Nov 26 02:19 wrapper_checkpoint.txt
[2025-11-26 02:19:44] -rw------- 1 boincer umatlas      4746 Nov 26 02:19 pilotlog.txt
[2025-11-26 02:19:44] -rw------- 1 boincer umatlas   6190960 Nov 26 02:19 log.47556173._000400.job.log.1
[2025-11-26 02:19:44] -rw------- 1 boincer umatlas       353 Nov 26 02:19 output.list
[2025-11-26 02:19:44] -rw-r--r-- 1 boincer umatlas       620 Nov 26 02:19 runtime_log
[2025-11-26 02:19:44] -rw------- 1 boincer umatlas   8192000 Nov 26 02:19 result.tar.gz
[2025-11-26 02:19:44] -rw-r--r-- 1 boincer umatlas      9343 Nov 26 02:19 runtime_log.err
[2025-11-26 02:19:44] -rw------- 1 boincer umatlas       668 Nov 26 02:19 nc1MDmEysh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmkCJKDmlQwKyn.diag
[2025-11-26 02:19:44] -rw-r--r-- 1 boincer umatlas     21297 Nov 26 02:19 stderr.txt
[2025-11-26 02:19:44] HITS file was successfully produced:
[2025-11-26 02:19:44] -rw------- 1 boincer umatlas 902747796 Nov 26 02:17 shared/HITS.pool.root.1
[2025-11-26 02:19:44]  *** Contents of shared directory: ***
[2025-11-26 02:19:44] total 1288808
[2025-11-26 02:19:44] -rw-r--r-- 2 boincer umatlas 408179219 Nov 25 13:49 ATLAS.root_0
[2025-11-26 02:19:44] -rw-r--r-- 2 boincer umatlas    590103 Nov 25 13:49 input.tar.gz
[2025-11-26 02:19:44] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 13:49 start_atlas.sh
[2025-11-26 02:19:44] -rw------- 1 boincer umatlas 902747796 Nov 26 02:17 HITS.pool.root.1
[2025-11-26 02:19:44] -rw------- 1 boincer umatlas   8192000 Nov 26 02:19 result.tar.gz
02:19:46 (15395): run_atlas exited; CPU time 343667.436194
02:19:46 (15395): called boinc_finish(0)

</stderr_txt>
]]>

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