Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
06:20:33 (1789237): wrapper (7.7.26015): starting
06:20:33 (1789237): wrapper: running run_atlas (--nthreads 4)
[2025-11-28 06:20:33] Arguments: --nthreads 4
[2025-11-28 06:20:33] Threads: 4
[2025-11-28 06:20:33] Checking for CVMFS
[2025-11-28 06:20:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 06:20:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 06:20:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 06:20:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 06:20:34] 2.12.7.0 2869 8500 65548 153399 0 72 4482869 6144001 841 130560 0 5235151 99.987 324540 2514 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.46:3128 1
[2025-11-28 06:20:34] CVMFS is ok
[2025-11-28 06:20:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 06:20:34] Checking for apptainer binary...
[2025-11-28 06:20:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-28 06:20:34] Running /usr/bin/apptainer --version
[2025-11-28 06:20:34] apptainer version 1.4.2
[2025-11-28 06:20:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 06:20:34] TS-P310
[2025-11-28 06:20:34] apptainer works
[2025-11-28 06:20:34] Set ATHENA_PROC_NUMBER=4
[2025-11-28 06:20:34] Set ATHENA_CORE_NUMBER=4
[2025-11-28 06:20:34] Starting ATLAS job with PandaID=6896714606
[2025-11-28 06:20:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc2/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 19:40:05]  *** The last 200 lines of the pilot log: ***
[2025-11-28 19:40:05] 2025-11-28 18:39:08,738 | INFO     | monitor loop #3587: job 0:6896714606 is in state 'finished'
[2025-11-28 19:40:05] 2025-11-28 18:39:08,738 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 19:40:05] 2025-11-28 18:39:10,525 | INFO     | time since job start (47910s) is within the limit (172800.0s)
[2025-11-28 19:40:05] 2025-11-28 18:39:10,589 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 19:40:05] 2025-11-28 18:39:10,591 | INFO     | found 4 cores (4 cores per socket, 1 socket) HT, CPU MHz: 3699.746625
[2025-11-28 19:40:05] 2025-11-28 18:39:10,592 | INFO     | using path: /var/lib/boinc2/slots/0/PanDA_Pilot-6896714606/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 19:40:05] 2025-11-28 18:39:10,592 | INFO     | extracted standard info from prmon json
[2025-11-28 19:40:05] 2025-11-28 18:39:10,592 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 19:40:05] 2025-11-28 18:39:10,593 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 19:40:05] 2025-11-28 18:39:10,602 | INFO     | fitting pss+swap vs Time
[2025-11-28 19:40:05] 2025-11-28 18:39:10,602 | INFO     | sum of square deviations: 149998421720.0
[2025-11-28 19:40:05] 2025-11-28 18:39:10,613 | INFO     | sum of deviations: 593187201167.0
[2025-11-28 19:40:05] 2025-11-28 18:39:10,613 | INFO     | mean x: 1764331174.0
[2025-11-28 19:40:05] 2025-11-28 18:39:10,613 | INFO     | mean y: 2368871.0203821654
[2025-11-28 19:40:05] 2025-11-28 18:39:10,613 | INFO     | intersect: -6974895683.071937
[2025-11-28 19:40:05] 2025-11-28 18:39:10,614 | INFO     | chi2: 2.913818692410243
[2025-11-28 19:40:05] 2025-11-28 18:39:10,615 | INFO     | sum of square deviations: 147150424135.0
[2025-11-28 19:40:05] 2025-11-28 18:39:10,625 | INFO     | sum of deviations: 712109399197.0
[2025-11-28 19:40:05] 2025-11-28 18:39:10,625 | INFO     | mean x: 1764331021.5
[2025-11-28 19:40:05] 2025-11-28 18:39:10,625 | INFO     | mean y: 2375225.5153846154
[2025-11-28 19:40:05] 2025-11-28 18:39:10,625 | INFO     | intersect: -8535804063.402873
[2025-11-28 19:40:05] 2025-11-28 18:39:10,626 | INFO     | chi2: 1.5200889335567556
[2025-11-28 19:40:05] 2025-11-28 18:39:10,626 | INFO     | current chi2=1.5200889335567556 (change=47.83172551139847 %)
[2025-11-28 19:40:05] 2025-11-28 18:39:10,627 | INFO     | sum of square deviations: 144338706300.0
[2025-11-28 19:40:05] 2025-11-28 18:39:10,637 | INFO     | sum of deviations: 705828823946.9998
[2025-11-28 19:40:05] 2025-11-28 18:39:10,637 | INFO     | mean x: 1764330869.0
[2025-11-28 19:40:05] 2025-11-28 18:39:10,637 | INFO     | mean y: 2374884.8632258065
[2025-11-28 19:40:05] 2025-11-28 18:39:10,637 | INFO     | intersect: -8625356471.764973
[2025-11-28 19:40:05] 2025-11-28 18:39:10,638 | INFO     | chi2: 1.5175627246420456
[2025-11-28 19:40:05] 2025-11-28 18:39:10,638 | INFO     | current chi2=1.5175627246420456 (change=0.16618823142137448 %)
[2025-11-28 19:40:05] 2025-11-28 18:39:10,638 | INFO     | right removable region: 774
[2025-11-28 19:40:05] 2025-11-28 18:39:10,639 | INFO     | sum of square deviations: 147150424135.0
[2025-11-28 19:40:05] 2025-11-28 18:39:10,649 | INFO     | sum of deviations: 475577995563.00006
[2025-11-28 19:40:05] 2025-11-28 18:39:10,649 | INFO     | mean x: 1764331326.5
[2025-11-28 19:40:05] 2025-11-28 18:39:10,649 | INFO     | mean y: 2375150.7102564103
[2025-11-28 19:40:05] 2025-11-28 18:39:10,649 | INFO     | intersect: -5699797715.581218
[2025-11-28 19:40:05] 2025-11-28 18:39:10,650 | INFO     | chi2: 1.5113862170651362
[2025-11-28 19:40:05] 2025-11-28 18:39:10,650 | INFO     | current chi2=1.5113862170651362 (change=48.13039599883434 %)
[2025-11-28 19:40:05] 2025-11-28 18:39:10,651 | INFO     | sum of square deviations: 144338706300.0
[2025-11-28 19:40:05] 2025-11-28 18:39:10,661 | INFO     | sum of deviations: 454384144095.00024
[2025-11-28 19:40:05] 2025-11-28 18:39:10,661 | INFO     | mean x: 1764331479.0
[2025-11-28 19:40:05] 2025-11-28 18:39:10,661 | INFO     | mean y: 2376299.486451613
[2025-11-28 19:40:05] 2025-11-28 18:39:10,661 | INFO     | intersect: -5551811274.559174
[2025-11-28 19:40:05] 2025-11-28 18:39:10,662 | INFO     | chi2: 1.5020344568513702
[2025-11-28 19:40:05] 2025-11-28 18:39:10,662 | INFO     | current chi2=1.5020344568513702 (change=0.6187538372505228 %)
[2025-11-28 19:40:05] 2025-11-28 18:39:10,662 | INFO     | left removable region: 20
[2025-11-28 19:40:05] 2025-11-28 18:39:10,662 | INFO     | sum of square deviations: 132920417792.5
[2025-11-28 19:40:05] 2025-11-28 18:39:10,672 | INFO     | sum of deviations: 537333372806.5
[2025-11-28 19:40:05] 2025-11-28 18:39:10,672 | INFO     | mean x: 1764331448.5
[2025-11-28 19:40:05] 2025-11-28 18:39:10,672 | INFO     | mean y: 2384060.7175066313
[2025-11-28 19:40:05] 2025-11-28 18:39:10,672 | INFO     | intersect: -7129960117.217925
[2025-11-28 19:40:05] 2025-11-28 18:39:10,673 | INFO     | chi2: 0.09852053861772324
[2025-11-28 19:40:05] 2025-11-28 18:39:10,673 | INFO     | current memory leak: 4.04 B/s (using 754 data points, chi2=0.10)
[2025-11-28 19:40:05] 2025-11-28 18:39:10,674 | INFO     | could have reported an average CPU frequency of 3702 MHz (30 samples)
[2025-11-28 19:40:05] 2025-11-28 18:39:10,674 | INFO     | ..............................
[2025-11-28 19:40:05] 2025-11-28 18:39:10,674 | INFO     | . Timing measurements:
[2025-11-28 19:40:05] 2025-11-28 18:39:10,674 | INFO     | . get job = 0 s
[2025-11-28 19:40:05] 2025-11-28 18:39:10,674 | INFO     | . initial setup = 1 s
[2025-11-28 19:40:05] 2025-11-28 18:39:10,674 | INFO     | . payload setup = 3 s
[2025-11-28 19:40:05] 2025-11-28 18:39:10,674 | INFO     | . stage-in = 0 s
[2025-11-28 19:40:05] 2025-11-28 18:39:10,674 | INFO     | . payload execution = 47882 s
[2025-11-28 19:40:05] 2025-11-28 18:39:10,674 | INFO     | . stage-out = 1 s
[2025-11-28 19:40:05] 2025-11-28 18:39:10,674 | INFO     | . log creation = 0 s
[2025-11-28 19:40:05] 2025-11-28 18:39:10,674 | INFO     | ..............................
[2025-11-28 19:40:05] 2025-11-28 18:39:10,802 | INFO     | 
[2025-11-28 19:40:05] 2025-11-28 18:39:10,802 | INFO     | job summary report
[2025-11-28 19:40:05] 2025-11-28 18:39:10,802 | INFO     | --------------------------------------------------
[2025-11-28 19:40:05] 2025-11-28 18:39:10,803 | INFO     | PanDA job id: 6896714606
[2025-11-28 19:40:05] 2025-11-28 18:39:10,803 | INFO     | task id: 47556161
[2025-11-28 19:40:05] 2025-11-28 18:39:10,803 | INFO     | errors: (none)
[2025-11-28 19:40:05] 2025-11-28 18:39:10,803 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 19:40:05] 2025-11-28 18:39:10,803 | INFO     | pilot state: finished 
[2025-11-28 19:40:05] 2025-11-28 18:39:10,803 | INFO     | transexitcode: 0
[2025-11-28 19:40:05] 2025-11-28 18:39:10,803 | INFO     | exeerrorcode: 0
[2025-11-28 19:40:05] 2025-11-28 18:39:10,803 | INFO     | exeerrordiag: 
[2025-11-28 19:40:05] 2025-11-28 18:39:10,803 | INFO     | exitcode: 0
[2025-11-28 19:40:05] 2025-11-28 18:39:10,803 | INFO     | exitmsg: OK
[2025-11-28 19:40:05] 2025-11-28 18:39:10,803 | INFO     | cpuconsumptiontime: 188506 s
[2025-11-28 19:40:05] 2025-11-28 18:39:10,803 | INFO     | nevents: 1000
[2025-11-28 19:40:05] 2025-11-28 18:39:10,803 | INFO     | neventsw: 0
[2025-11-28 19:40:05] 2025-11-28 18:39:10,803 | INFO     | pid: 1799364
[2025-11-28 19:40:05] 2025-11-28 18:39:10,803 | INFO     | pgrp: 1799364
[2025-11-28 19:40:05] 2025-11-28 18:39:10,803 | INFO     | corecount: 4
[2025-11-28 19:40:05] 2025-11-28 18:39:10,804 | INFO     | event service: False
[2025-11-28 19:40:05] 2025-11-28 18:39:10,804 | INFO     | sizes: {0: 2283436, 1: 2284293, 3: 2284555, 12: 2284583, 47889: 2332450, 47891: 2341630, 47896: 2341820}
[2025-11-28 19:40:05] 2025-11-28 18:39:10,804 | INFO     | --------------------------------------------------
[2025-11-28 19:40:05] 2025-11-28 18:39:10,804 | INFO     | 
[2025-11-28 19:40:05] 2025-11-28 18:39:10,804 | INFO     | executing command: ls -lF /var/lib/boinc2/slots/0
[2025-11-28 19:40:05] 2025-11-28 18:39:10,816 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 19:40:05] 2025-11-28 18:39:10,816 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 19:40:05] 2025-11-28 18:39:10,816 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 19:40:05] 2025-11-28 18:39:10,816 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 19:40:05] 2025-11-28 18:39:10,816 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 19:40:05] 2025-11-28 18:39:10,817 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 19:40:05] 2025-11-28 18:39:10,817 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 19:40:05] 2025-11-28 18:39:10,817 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 19:40:05] 2025-11-28 18:39:10,817 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 19:40:05] 2025-11-28 18:39:10,817 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 19:40:05] 2025-11-28 18:39:10,817 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 19:40:05] 2025-11-28 18:39:10,817 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 19:40:05] 2025-11-28 18:39:10,817 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 19:40:05] 2025-11-28 18:39:10,817 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 19:40:05] 2025-11-28 18:39:10,817 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 19:40:05] 2025-11-28 18:39:10,817 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 19:40:05] 2025-11-28 18:39:10,817 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 19:40:05] 2025-11-28 18:39:10,817 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 19:40:05] 2025-11-28 18:39:10,817 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 19:40:05] 2025-11-28 18:39:10,818 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 19:40:05] 2025-11-28 18:39:10,818 | INFO     | job 6896714606 has completed (purged errors)
[2025-11-28 19:40:05] 2025-11-28 18:39:10,818 | INFO     | overall cleanup function is called
[2025-11-28 19:40:05] 2025-11-28 18:39:11,825 | INFO     | --- collectZombieJob: --- 10, [1799364]
[2025-11-28 19:40:05] 2025-11-28 18:39:11,825 | INFO     | zombie collector waiting for pid 1799364
[2025-11-28 19:40:05] 2025-11-28 18:39:11,825 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 19:40:05] 2025-11-28 18:39:11,825 | INFO     | collected zombie processes
[2025-11-28 19:40:05] 2025-11-28 18:39:11,825 | INFO     | will attempt to kill all subprocesses of pid=1799364
[2025-11-28 19:40:05] 2025-11-28 18:39:11,891 | INFO     | process IDs to be killed: [1799364] (in reverse order)
[2025-11-28 19:40:05] 2025-11-28 18:39:11,917 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 19:40:05] 2025-11-28 18:39:11,918 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 19:40:05] 2025-11-28 18:39:11,920 | INFO     | did not find any defunct processes belonging to 1799364
[2025-11-28 19:40:05] 2025-11-28 18:39:11,921 | INFO     | did not find any defunct processes belonging to 1799364
[2025-11-28 19:40:05] 2025-11-28 18:39:11,923 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 19:40:05] 2025-11-28 18:39:11,923 | INFO     | ready for new job
[2025-11-28 19:40:05] 2025-11-28 18:39:11,923 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 19:40:05] 2025-11-28 18:39:11,925 | INFO     | ***************************************
[2025-11-28 19:40:05] 2025-11-28 18:39:11,925 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 19:40:05] 2025-11-28 18:39:11,926 | INFO     | ***************************************
[2025-11-28 19:40:05] 2025-11-28 18:39:11,926 | INFO     | 
[2025-11-28 19:40:05] 2025-11-28 18:39:11,926 | INFO     | architecture information:
[2025-11-28 19:40:05] 2025-11-28 18:39:11,926 | INFO     | executing command: cat /etc/os-release
[2025-11-28 19:40:05] 2025-11-28 18:39:11,935 | INFO     | cat /etc/os-release:
[2025-11-28 19:40:05] NAME="CentOS Linux"
[2025-11-28 19:40:05] VERSION="7 (Core)"
[2025-11-28 19:40:05] ID="centos"
[2025-11-28 19:40:05] ID_LIKE="rhel fedora"
[2025-11-28 19:40:05] VERSION_ID="7"
[2025-11-28 19:40:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 19:40:05] ANSI_COLOR="0;31"
[2025-11-28 19:40:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 19:40:05] HOME_URL="https://www.centos.org/"
[2025-11-28 19:40:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 19:40:05] 
[2025-11-28 19:40:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 19:40:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 19:40:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 19:40:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 19:40:05] 
[2025-11-28 19:40:05] 2025-11-28 18:39:11,935 | INFO     | ***************************************
[2025-11-28 19:40:05] 2025-11-28 18:39:12,438 | INFO     | executing command: df -mP /var/lib/boinc2/slots/0
[2025-11-28 19:40:05] 2025-11-28 18:39:12,448 | INFO     | sufficient remaining disk space (74279026688 B)
[2025-11-28 19:40:05] 2025-11-28 18:39:12,448 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 19:40:05] 2025-11-28 18:39:12,448 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 19:40:05] 2025-11-28 18:39:12,448 | INFO     | update_server=False
[2025-11-28 19:40:05] 2025-11-28 18:39:12,448 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 19:40:05] 2025-11-28 18:39:12,449 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-28 19:40:05] 2025-11-28 18:39:12,449 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 19:40:05] 2025-11-28 18:39:12,449 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 19:40:05] 2025-11-28 18:39:12,449 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 19:40:05] 2025-11-28 18:39:12,449 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 19:40:05] 2025-11-28 18:39:12,449 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 19:40:05] 2025-11-28 18:39:12,449 | INFO     | aborting loop
[2025-11-28 19:40:05] 2025-11-28 18:39:13,098 | INFO     | all job control threads have been joined
[2025-11-28 19:40:05] 2025-11-28 18:39:13,268 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 19:40:05] 2025-11-28 18:39:13,345 | INFO     | all data control threads have been joined
[2025-11-28 19:40:05] 2025-11-28 18:39:13,452 | INFO     | [job] job monitor thread has finished
[2025-11-28 19:40:05] 2025-11-28 18:39:13,454 | INFO     | [job] retrieve thread has finished
[2025-11-28 19:40:05] 2025-11-28 18:39:13,454 | INFO     | [job] queue monitor thread has finished
[2025-11-28 19:40:05] 2025-11-28 18:39:13,605 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 19:40:05] 2025-11-28 18:39:13,791 | INFO     | all payload control threads have been joined
[2025-11-28 19:40:05] 2025-11-28 18:39:14,103 | INFO     | [job] control thread has finished
[2025-11-28 19:40:05] 2025-11-28 18:39:14,282 | INFO     | [payload] validate_post thread has finished
[2025-11-28 19:40:05] 2025-11-28 18:39:14,348 | INFO     | [data] control thread has finished
[2025-11-28 19:40:05] 2025-11-28 18:39:14,493 | INFO     | [data] copytool_in thread has finished
[2025-11-28 19:40:05] 2025-11-28 18:39:14,612 | INFO     | [job] validate thread has finished
[2025-11-28 19:40:05] 2025-11-28 18:39:14,728 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 19:40:05] 2025-11-28 18:39:14,752 | INFO     | [payload] failed_post thread has finished
[2025-11-28 19:40:05] 2025-11-28 18:39:14,797 | INFO     | [payload] control thread has finished
[2025-11-28 19:40:05] 2025-11-28 18:39:14,883 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 19:40:05] 2025-11-28 18:39:15,271 | INFO     | [data] copytool_out thread has finished
[2025-11-28 19:40:05] 2025-11-28 18:39:15,851 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 19:40:05] 2025-11-28 18:39:19,855 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 19:40:05] 2025-11-28 18:39:22,691 | INFO     | job.realtimelogging is not enabled
[2025-11-28 19:40:05] 2025-11-28 18:39:23,697 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 19:40:05] 2025-11-28 18:39:59,708 | INFO     | [monitor] cgroup control has ended
[2025-11-28 19:40:05] 2025-11-28 18:39:59,870 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140190789003072)>', '<ExcThread(monitor, started 140190081349376)>']
[2025-11-28 19:40:05] 2025-11-28 18:40:00,668 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 19:40:05] 2025-11-28 18:40:00,668 | INFO     | [monitor] control thread has ended
[2025-11-28 19:40:05] 2025-11-28 18:40:04,895 | INFO     | all workflow threads have been joined
[2025-11-28 19:40:05] 2025-11-28 18:40:04,896 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 19:40:05] 2025-11-28 18:40:04,896 | INFO     | traces error code: 0
[2025-11-28 19:40:05] 2025-11-28 18:40:04,896 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 19:40:05] 2025-11-28 18:40:04,973 [wrapper] ==== pilot stdout END ====
[2025-11-28 19:40:05] 2025-11-28 18:40:04,975 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 19:40:05] 2025-11-28 18:40:04,977 [wrapper] pilotpid: 1792941
[2025-11-28 19:40:05] 2025-11-28 18:40:04,979 [wrapper] Pilot exit status: 0
[2025-11-28 19:40:05] 2025-11-28 18:40:04,985 [wrapper] pandaids: 6896714606
[2025-11-28 19:40:05] 2025-11-28 18:40:05,002 [wrapper] cleanup supervisor_pilot 1950136 1792942
[2025-11-28 19:40:05] 2025-11-28 18:40:05,004 [wrapper] Test setup, not cleaning
[2025-11-28 19:40:05] 2025-11-28 18:40:05,006 [wrapper] apfmon messages muted
[2025-11-28 19:40:05] 2025-11-28 18:40:05,008 [wrapper] ==== wrapper stdout END ====
[2025-11-28 19:40:05] 2025-11-28 18:40:05,009 [wrapper] ==== wrapper stderr END ====
[2025-11-28 19:40:05]  *** Error codes and diagnostics ***
[2025-11-28 19:40:05]     "exeErrorCode": 0,
[2025-11-28 19:40:05]     "exeErrorDiag": "",
[2025-11-28 19:40:05]     "pilotErrorCode": 0,
[2025-11-28 19:40:05]     "pilotErrorDiag": "",
[2025-11-28 19:40:05]  *** Listing of results directory ***
[2025-11-28 19:40:05] insgesamt 1311948
[2025-11-28 19:40:05] -rw-r--r-- 1 boinc boinc    576529 25. Nov 07:04 pilot3.tar.gz
[2025-11-28 19:40:05] -rw-r--r-- 1 boinc boinc      5112 25. Nov 07:41 queuedata.json
[2025-11-28 19:40:05] -rwx------ 1 boinc boinc     36292 25. Nov 07:43 runpilot2-wrapper.sh
[2025-11-28 19:40:05] -rw-r--r-- 1 boinc boinc       100 28. Nov 06:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 19:40:05] -rwxr-xr-x 1 boinc boinc      7986 28. Nov 06:20 run_atlas
[2025-11-28 19:40:05] -rw-r--r-- 1 boinc boinc       105 28. Nov 06:20 job.xml
[2025-11-28 19:40:05] -rw-r--r-- 2 boinc boinc     15847 28. Nov 06:20 start_atlas.sh
[2025-11-28 19:40:05] drwxrwx--x 2 boinc boinc      4096 28. Nov 06:20 shared
[2025-11-28 19:40:05] -rw-r--r-- 2 boinc boinc    590103 28. Nov 06:20 input.tar.gz
[2025-11-28 19:40:05] -rw-r--r-- 1 boinc boinc      6767 28. Nov 06:20 init_data.xml
[2025-11-28 19:40:05] -rw-r--r-- 2 boinc boinc 409646500 28. Nov 06:20 EVNT.47483658._002123.pool.root.1
[2025-11-28 19:40:05] -rw-r--r-- 1 boinc boinc         0 28. Nov 06:20 boinc_lockfile
[2025-11-28 19:40:05] -rw-r--r-- 1 boinc boinc      2785 28. Nov 06:20 pandaJob.out
[2025-11-28 19:40:05] -rw------- 1 boinc boinc        52 28. Nov 06:20 setup.sh.local
[2025-11-28 19:40:05] -rw------- 1 boinc boinc    991858 28. Nov 06:20 agis_schedconf.cvmfs.json
[2025-11-28 19:40:05] drwx------ 5 boinc boinc      4096 28. Nov 06:20 pilot3
[2025-11-28 19:40:05] -rw-r--r-- 1 boinc boinc       532 28. Nov 19:33 boinc_task_state.xml
[2025-11-28 19:40:05] -rw------- 1 boinc boinc 913123826 28. Nov 19:38 HITS.47556161._001069.pool.root.1
[2025-11-28 19:40:05] -rw------- 1 boinc boinc        95 28. Nov 19:38 pilot_heartbeat.json
[2025-11-28 19:40:05] -rw------- 1 boinc boinc      1028 28. Nov 19:39 memory_monitor_summary.json
[2025-11-28 19:40:05] -rw------- 1 boinc boinc   1516240 28. Nov 19:39 agis_ddmendpoints.agis.ALL.json
[2025-11-28 19:40:05] -rw------- 1 boinc boinc   1536228 28. Nov 19:39 log.47556161._001069.job.log.tgz.1
[2025-11-28 19:40:05] -rw------- 1 boinc boinc      8583 28. Nov 19:39 heartbeat.json
[2025-11-28 19:40:05] -rw-r--r-- 1 boinc boinc        29 28. Nov 19:39 wrapper_checkpoint.txt
[2025-11-28 19:40:05] -rw------- 1 boinc boinc      4625 28. Nov 19:40 pilotlog.txt
[2025-11-28 19:40:05] -rw-r--r-- 1 boinc boinc      8192 28. Nov 19:40 boinc_mmap_file
[2025-11-28 19:40:05] -rw------- 1 boinc boinc   6832635 28. Nov 19:40 log.47556161._001069.job.log.1
[2025-11-28 19:40:05] -rw------- 1 boinc boinc       353 28. Nov 19:40 output.list
[2025-11-28 19:40:05] -rw-r--r-- 1 boinc boinc       620 28. Nov 19:40 runtime_log
[2025-11-28 19:40:05] -rw------- 1 boinc boinc   8386560 28. Nov 19:40 result.tar.gz
[2025-11-28 19:40:05] -rw------- 1 boinc boinc       652 28. Nov 19:40 XSENDmew1h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmDDMKDmT4ulOn.diag
[2025-11-28 19:40:05] -rw-r--r-- 1 boinc boinc      9304 28. Nov 19:40 runtime_log.err
[2025-11-28 19:40:05] -rw-r--r-- 1 boinc boinc     20845 28. Nov 19:40 stderr.txt
[2025-11-28 19:40:05] HITS file was successfully produced:
[2025-11-28 19:40:05] -rw------- 1 boinc boinc 913123826 28. Nov 19:38 shared/HITS.pool.root.1
[2025-11-28 19:40:05]  *** Contents of shared directory: ***
[2025-11-28 19:40:05] insgesamt 1300568
[2025-11-28 19:40:05] -rw-r--r-- 2 boinc boinc     15847 28. Nov 06:20 start_atlas.sh
[2025-11-28 19:40:05] -rw-r--r-- 2 boinc boinc    590103 28. Nov 06:20 input.tar.gz
[2025-11-28 19:40:05] -rw-r--r-- 2 boinc boinc 409646500 28. Nov 06:20 ATLAS.root_0
[2025-11-28 19:40:05] -rw------- 1 boinc boinc 913123826 28. Nov 19:38 HITS.pool.root.1
[2025-11-28 19:40:05] -rw------- 1 boinc boinc   8386560 28. Nov 19:40 result.tar.gz
19:40:06 (1789237): run_atlas exited; CPU time 188680.753323
19:40:06 (1789237): called boinc_finish(0)

</stderr_txt>
]]>

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