Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:14:07 (10337): wrapper (7.7.26015): starting
11:14:07 (10337): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 11:14:07] Arguments: --nthreads 8
[2025-11-25 11:14:07] Threads: 8
[2025-11-25 11:14:07] Checking for CVMFS
[2025-11-25 11:14:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 11:14:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 11:14:07] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 11:14:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 11:14:07] 2.11.2.0 24877 116469 142492 153287 2 90 16928575 18432001 1885 130560 0 84489530 99.974 4823048 31909 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 11:14:07] CVMFS is ok
[2025-11-25 11:14:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 11:14:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 11:14:07] Further information can be found at the LHC@home message board.
[2025-11-25 11:14:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 11:14:07] Checking for apptainer binary...
[2025-11-25 11:14:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 11:14:07] Running /usr/bin/apptainer --version
[2025-11-25 11:14:08] apptainer version 1.3.2-1.el7
[2025-11-25 11:14:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 11:14:08] c-206-3.aglt2.org
[2025-11-25 11:14:08] apptainer works
[2025-11-25 11:14:08] Set ATHENA_PROC_NUMBER=8
[2025-11-25 11:14:08] Set ATHENA_CORE_NUMBER=8
[2025-11-25 11:14:08] Starting ATLAS job with PandaID=6896044261
[2025-11-25 11:14:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 06:38:22]  *** The last 200 lines of the pilot log: ***
[2025-11-26 06:38:22] 2025-11-26 11:37:47,293 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 06:38:22] 2025-11-26 11:37:48,130 | INFO     | PID=14765 has CPU usage=18.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 06:38:22] 2025-11-26 11:37:48,131 | INFO     | .. there are 3 such processes running
[2025-11-26 06:38:22] 2025-11-26 11:37:48,527 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 06:38:22] 2025-11-26 11:37:48,533 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2433.5416666666665
[2025-11-26 06:38:22] 2025-11-26 11:37:48,538 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6896044261/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 06:38:22] 2025-11-26 11:37:48,538 | INFO     | extracted standard info from prmon json
[2025-11-26 06:38:22] 2025-11-26 11:37:48,539 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 06:38:22] 2025-11-26 11:37:48,539 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 06:38:22] 2025-11-26 11:37:48,567 | INFO     | fitting pss+swap vs Time
[2025-11-26 06:38:22] 2025-11-26 11:37:48,569 | INFO     | sum of square deviations: 464251971685.8735
[2025-11-26 06:38:22] 2025-11-26 11:37:48,611 | INFO     | sum of deviations: 2122531155544.7708
[2025-11-26 06:38:22] 2025-11-26 11:37:48,612 | INFO     | mean x: 1764122147.125874
[2025-11-26 06:38:22] 2025-11-26 11:37:48,612 | INFO     | mean y: 2862495.105769231
[2025-11-26 06:38:22] 2025-11-26 11:37:48,612 | INFO     | intersect: -8062594299.53931
[2025-11-26 06:38:22] 2025-11-26 11:37:48,614 | INFO     | chi2: 6.439414682712689
[2025-11-26 06:38:22] 2025-11-26 11:37:48,616 | INFO     | sum of square deviations: 458191499683.90674
[2025-11-26 06:38:22] 2025-11-26 11:37:48,658 | INFO     | sum of deviations: 2473464406204.974
[2025-11-26 06:38:22] 2025-11-26 11:37:48,658 | INFO     | mean x: 1764121994.6286216
[2025-11-26 06:38:22] 2025-11-26 11:37:48,658 | INFO     | mean y: 2871323.9455662863
[2025-11-26 06:38:22] 2025-11-26 11:37:48,658 | INFO     | intersect: -9520423990.191574
[2025-11-26 06:38:22] 2025-11-26 11:37:48,660 | INFO     | chi2: 3.6511973568535825
[2025-11-26 06:38:22] 2025-11-26 11:37:48,660 | INFO     | current chi2=3.6511973568535825 (change=43.29923546225995 %)
[2025-11-26 06:38:22] 2025-11-26 11:37:48,662 | INFO     | sum of square deviations: 452184005419.4227
[2025-11-26 06:38:22] 2025-11-26 11:37:48,703 | INFO     | sum of deviations: 2657512378234.7563
[2025-11-26 06:38:22] 2025-11-26 11:37:48,703 | INFO     | mean x: 1764121842.1313932
[2025-11-26 06:38:22] 2025-11-26 11:37:48,703 | INFO     | mean y: 2875995.102292769
[2025-11-26 06:38:22] 2025-11-26 11:37:48,703 | INFO     | intersect: -10364973322.853937
[2025-11-26 06:38:22] 2025-11-26 11:37:48,705 | INFO     | chi2: 2.8044982701945878
[2025-11-26 06:38:22] 2025-11-26 11:37:48,705 | INFO     | current chi2=2.8044982701945878 (change=23.18962805638743 %)
[2025-11-26 06:38:22] 2025-11-26 11:37:48,705 | INFO     | right removable region: 1133
[2025-11-26 06:38:22] 2025-11-26 11:37:48,707 | INFO     | sum of square deviations: 458191062923.9064
[2025-11-26 06:38:22] 2025-11-26 11:37:48,736 | INFO     | sum of deviations: 1811652125643.6565
[2025-11-26 06:38:22] 2025-11-26 11:37:48,736 | INFO     | mean x: 1764122299.6286216
[2025-11-26 06:38:22] 2025-11-26 11:37:48,736 | INFO     | mean y: 2870309.568920105
[2025-11-26 06:38:22] 2025-11-26 11:37:48,736 | INFO     | intersect: -6972333208.419243
[2025-11-26 06:38:22] 2025-11-26 11:37:48,737 | INFO     | chi2: 4.2814386043148005
[2025-11-26 06:38:22] 2025-11-26 11:37:48,737 | INFO     | current chi2=4.2814386043148005 (change=33.511991147133465 %)
[2025-11-26 06:38:22] 2025-11-26 11:37:48,738 | INFO     | sum of square deviations: 452183201134.68445
[2025-11-26 06:38:22] 2025-11-26 11:37:48,761 | INFO     | sum of deviations: 1717725964797.4065
[2025-11-26 06:38:22] 2025-11-26 11:37:48,761 | INFO     | mean x: 1764122452.1305115
[2025-11-26 06:38:22] 2025-11-26 11:37:48,762 | INFO     | mean y: 2872693.335097002
[2025-11-26 06:38:22] 2025-11-26 11:37:48,762 | INFO     | intersect: -6698568080.012141
[2025-11-26 06:38:22] 2025-11-26 11:37:48,763 | INFO     | chi2: 4.179992661524055
[2025-11-26 06:38:22] 2025-11-26 11:37:48,763 | INFO     | current chi2=4.179992661524055 (change=2.3694358874727173 %)
[2025-11-26 06:38:22] 2025-11-26 11:37:48,763 | INFO     | left removable region: 20
[2025-11-26 06:38:22] 2025-11-26 11:37:48,764 | INFO     | sum of square deviations: 427524462155.079
[2025-11-26 06:38:22] 2025-11-26 11:37:48,800 | INFO     | sum of deviations: 2141892554316.3801
[2025-11-26 06:38:22] 2025-11-26 11:37:48,801 | INFO     | mean x: 1764122421.6379156
[2025-11-26 06:38:22] 2025-11-26 11:37:48,801 | INFO     | mean y: 2890671.991015274
[2025-11-26 06:38:22] 2025-11-26 11:37:48,801 | INFO     | intersect: -8835342024.125937
[2025-11-26 06:38:22] 2025-11-26 11:37:48,803 | INFO     | chi2: 0.3658371901722839
[2025-11-26 06:38:22] 2025-11-26 11:37:48,803 | INFO     | current memory leak: 5.01 B/s (using 1113 data points, chi2=0.37)
[2025-11-26 06:38:22] 2025-11-26 11:37:48,804 | INFO     | could have reported an average CPU frequency of 2626 MHz (42 samples)
[2025-11-26 06:38:22] 2025-11-26 11:37:48,804 | INFO     | ..............................
[2025-11-26 06:38:22] 2025-11-26 11:37:48,805 | INFO     | . Timing measurements:
[2025-11-26 06:38:22] 2025-11-26 11:37:48,805 | INFO     | . get job = 0 s
[2025-11-26 06:38:22] 2025-11-26 11:37:48,805 | INFO     | . initial setup = 2 s
[2025-11-26 06:38:22] 2025-11-26 11:37:48,805 | INFO     | . payload setup = 5 s
[2025-11-26 06:38:22] 2025-11-26 11:37:48,805 | INFO     | . stage-in = 0 s
[2025-11-26 06:38:22] 2025-11-26 11:37:48,805 | INFO     | . payload execution = 69774 s
[2025-11-26 06:38:22] 2025-11-26 11:37:48,806 | INFO     | . stage-out = 4 s
[2025-11-26 06:38:22] 2025-11-26 11:37:48,806 | INFO     | . log creation = 0 s
[2025-11-26 06:38:22] 2025-11-26 11:37:48,806 | INFO     | ..............................
[2025-11-26 06:38:22] 2025-11-26 11:37:48,941 | INFO     | 
[2025-11-26 06:38:22] 2025-11-26 11:37:48,941 | INFO     | job summary report
[2025-11-26 06:38:22] 2025-11-26 11:37:48,942 | INFO     | --------------------------------------------------
[2025-11-26 06:38:22] 2025-11-26 11:37:48,942 | INFO     | PanDA job id: 6896044261
[2025-11-26 06:38:22] 2025-11-26 11:37:48,942 | INFO     | task id: 47556173
[2025-11-26 06:38:22] 2025-11-26 11:37:48,942 | INFO     | errors: (none)
[2025-11-26 06:38:22] 2025-11-26 11:37:48,942 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 06:38:22] 2025-11-26 11:37:48,942 | INFO     | pilot state: finished 
[2025-11-26 06:38:22] 2025-11-26 11:37:48,943 | INFO     | transexitcode: 0
[2025-11-26 06:38:22] 2025-11-26 11:37:48,943 | INFO     | exeerrorcode: 0
[2025-11-26 06:38:22] 2025-11-26 11:37:48,943 | INFO     | exeerrordiag: 
[2025-11-26 06:38:22] 2025-11-26 11:37:48,943 | INFO     | exitcode: 0
[2025-11-26 06:38:22] 2025-11-26 11:37:48,943 | INFO     | exitmsg: OK
[2025-11-26 06:38:22] 2025-11-26 11:37:48,943 | INFO     | cpuconsumptiontime: 535889 s
[2025-11-26 06:38:22] 2025-11-26 11:37:48,944 | INFO     | nevents: 1000
[2025-11-26 06:38:22] 2025-11-26 11:37:48,944 | INFO     | neventsw: 0
[2025-11-26 06:38:22] 2025-11-26 11:37:48,944 | INFO     | pid: 21221
[2025-11-26 06:38:22] 2025-11-26 11:37:48,944 | INFO     | pgrp: 21221
[2025-11-26 06:38:22] 2025-11-26 11:37:48,944 | INFO     | corecount: 8
[2025-11-26 06:38:22] 2025-11-26 11:37:48,944 | INFO     | event service: False
[2025-11-26 06:38:22] 2025-11-26 11:37:48,945 | INFO     | sizes: {0: 2284089, 1: 2284288, 4: 2284550, 12: 2284578, 69784: 2341121, 69788: 2350115, 69789: 2350299, 69794: 2350545}
[2025-11-26 06:38:22] 2025-11-26 11:37:48,945 | INFO     | --------------------------------------------------
[2025-11-26 06:38:22] 2025-11-26 11:37:48,945 | INFO     | 
[2025-11-26 06:38:22] 2025-11-26 11:37:48,945 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 06:38:22] 2025-11-26 11:37:48,966 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 06:38:22] 2025-11-26 11:37:48,967 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 06:38:22] 2025-11-26 11:37:48,967 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 06:38:22] 2025-11-26 11:37:48,967 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 06:38:22] 2025-11-26 11:37:48,967 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 06:38:22] 2025-11-26 11:37:48,968 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 06:38:22] 2025-11-26 11:37:48,968 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 06:38:22] 2025-11-26 11:37:48,968 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 06:38:22] 2025-11-26 11:37:48,968 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 06:38:22] 2025-11-26 11:37:48,968 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 06:38:22] 2025-11-26 11:37:48,968 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 06:38:22] 2025-11-26 11:37:48,969 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 06:38:22] 2025-11-26 11:37:48,969 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 06:38:22] 2025-11-26 11:37:48,969 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 06:38:22] 2025-11-26 11:37:48,969 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 06:38:22] 2025-11-26 11:37:48,969 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 06:38:22] 2025-11-26 11:37:48,969 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 06:38:22] 2025-11-26 11:37:48,970 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 06:38:22] 2025-11-26 11:37:48,970 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 06:38:22] 2025-11-26 11:37:48,970 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 06:38:22] 2025-11-26 11:37:48,970 | INFO     | job 6896044261 has completed (purged errors)
[2025-11-26 06:38:22] 2025-11-26 11:37:48,971 | INFO     | overall cleanup function is called
[2025-11-26 06:38:22] 2025-11-26 11:37:49,987 | INFO     | --- collectZombieJob: --- 10, [21221]
[2025-11-26 06:38:22] 2025-11-26 11:37:49,988 | INFO     | zombie collector waiting for pid 21221
[2025-11-26 06:38:22] 2025-11-26 11:37:49,988 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 06:38:22] 2025-11-26 11:37:49,988 | INFO     | collected zombie processes
[2025-11-26 06:38:22] 2025-11-26 11:37:49,988 | INFO     | will attempt to kill all subprocesses of pid=21221
[2025-11-26 06:38:22] 2025-11-26 11:37:50,147 | INFO     | process IDs to be killed: [21221] (in reverse order)
[2025-11-26 06:38:22] 2025-11-26 11:37:50,196 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 06:38:22] 2025-11-26 11:37:50,196 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 06:38:22] 2025-11-26 11:37:50,199 | INFO     | did not find any defunct processes belonging to 21221
[2025-11-26 06:38:22] 2025-11-26 11:37:50,201 | INFO     | did not find any defunct processes belonging to 21221
[2025-11-26 06:38:22] 2025-11-26 11:37:50,202 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 06:38:22] 2025-11-26 11:37:50,203 | INFO     | ready for new job
[2025-11-26 06:38:22] 2025-11-26 11:37:50,203 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 06:38:22] 2025-11-26 11:37:50,207 | INFO     | ***************************************
[2025-11-26 06:38:22] 2025-11-26 11:37:50,207 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 06:38:22] 2025-11-26 11:37:50,207 | INFO     | ***************************************
[2025-11-26 06:38:22] 2025-11-26 11:37:50,207 | INFO     | 
[2025-11-26 06:38:22] 2025-11-26 11:37:50,208 | INFO     | architecture information:
[2025-11-26 06:38:22] 2025-11-26 11:37:50,208 | INFO     | executing command: cat /etc/os-release
[2025-11-26 06:38:22] 2025-11-26 11:37:50,220 | INFO     | cat /etc/os-release:
[2025-11-26 06:38:22] NAME="CentOS Linux"
[2025-11-26 06:38:22] VERSION="7 (Core)"
[2025-11-26 06:38:22] ID="centos"
[2025-11-26 06:38:22] ID_LIKE="rhel fedora"
[2025-11-26 06:38:22] VERSION_ID="7"
[2025-11-26 06:38:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 06:38:22] ANSI_COLOR="0;31"
[2025-11-26 06:38:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 06:38:22] HOME_URL="https://www.centos.org/"
[2025-11-26 06:38:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 06:38:22] 
[2025-11-26 06:38:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 06:38:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 06:38:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 06:38:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 06:38:22] 
[2025-11-26 06:38:22] 2025-11-26 11:37:50,220 | INFO     | ***************************************
[2025-11-26 06:38:22] 2025-11-26 11:37:50,723 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 06:38:22] 2025-11-26 11:37:50,738 | INFO     | sufficient remaining disk space (26693599232 B)
[2025-11-26 06:38:22] 2025-11-26 11:37:50,739 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 06:38:22] 2025-11-26 11:37:50,739 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 06:38:22] 2025-11-26 11:37:50,739 | INFO     | update_server=False
[2025-11-26 06:38:22] 2025-11-26 11:37:50,739 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 06:38:22] 2025-11-26 11:37:50,739 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 06:38:22] 2025-11-26 11:37:50,802 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 06:38:22] 2025-11-26 11:37:50,802 | INFO     | aborting loop
[2025-11-26 06:38:22] 2025-11-26 11:37:51,192 | INFO     | all data control threads have been joined
[2025-11-26 06:38:22] 2025-11-26 11:37:51,235 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 06:38:22] 2025-11-26 11:37:51,332 | INFO     | all job control threads have been joined
[2025-11-26 06:38:22] 2025-11-26 11:37:51,634 | INFO     | all payload control threads have been joined
[2025-11-26 06:38:22] 2025-11-26 11:37:51,742 | INFO     | [job] retrieve thread has finished
[2025-11-26 06:38:22] 2025-11-26 11:37:51,744 | INFO     | [job] queue monitor thread has finished
[2025-11-26 06:38:22] 2025-11-26 11:37:51,808 | INFO     | [job] job monitor thread has finished
[2025-11-26 06:38:22] 2025-11-26 11:37:51,940 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 06:38:22] 2025-11-26 11:37:51,954 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 06:38:22] 2025-11-26 11:37:52,197 | INFO     | [data] control thread has finished
[2025-11-26 06:38:22] 2025-11-26 11:37:52,337 | INFO     | [job] control thread has finished
[2025-11-26 06:38:22] 2025-11-26 11:37:52,643 | INFO     | [payload] control thread has finished
[2025-11-26 06:38:22] 2025-11-26 11:37:52,664 | INFO     | [payload] validate_post thread has finished
[2025-11-26 06:38:22] 2025-11-26 11:37:52,735 | INFO     | [job] validate thread has finished
[2025-11-26 06:38:22] 2025-11-26 11:37:52,742 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 06:38:22] 2025-11-26 11:37:52,873 | INFO     | [data] copytool_in thread has finished
[2025-11-26 06:38:22] 2025-11-26 11:37:52,937 | INFO     | [payload] failed_post thread has finished
[2025-11-26 06:38:22] 2025-11-26 11:37:52,977 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 06:38:22] 2025-11-26 11:37:53,240 | INFO     | [data] copytool_out thread has finished
[2025-11-26 06:38:22] 2025-11-26 11:37:54,149 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 06:38:22] 2025-11-26 11:37:58,154 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 06:38:22] 2025-11-26 11:38:14,952 | INFO     | [monitor] cgroup control has ended
[2025-11-26 06:38:22] 2025-11-26 11:38:16,864 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140460101211968)>', '<ExcThread(monitor, started 140459882616576)>']
[2025-11-26 06:38:22] 2025-11-26 11:38:20,361 | INFO     | PID=14765 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 06:38:22] 2025-11-26 11:38:20,361 | INFO     | .. there are 3 such processes running
[2025-11-26 06:38:22] 2025-11-26 11:38:20,362 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 06:38:22] 2025-11-26 11:38:20,362 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 06:38:22] 2025-11-26 11:38:20,362 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 06:38:22] 2025-11-26 11:38:20,363 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 06:38:22] 2025-11-26 11:38:20,363 | INFO     | [monitor] control thread has ended
[2025-11-26 06:38:22] 2025-11-26 11:38:21,890 | INFO     | all workflow threads have been joined
[2025-11-26 06:38:22] 2025-11-26 11:38:21,890 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 06:38:22] 2025-11-26 11:38:21,891 | INFO     | traces error code: 0
[2025-11-26 06:38:22] 2025-11-26 11:38:21,891 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 06:38:22] 2025-11-26 11:38:22,020 [wrapper] ==== pilot stdout END ====
[2025-11-26 06:38:22] 2025-11-26 11:38:22,022 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 06:38:22] 2025-11-26 11:38:22,025 [wrapper] pilotpid: 14765
[2025-11-26 06:38:22] 2025-11-26 11:38:22,027 [wrapper] Pilot exit status: 0
[2025-11-26 06:38:22] 2025-11-26 11:38:22,036 [wrapper] pandaids: 6896044261
[2025-11-26 06:38:22] 2025-11-26 11:38:22,070 [wrapper] cleanup supervisor_pilot  8364 14766
[2025-11-26 06:38:22] 2025-11-26 11:38:22,073 [wrapper] Test setup, not cleaning
[2025-11-26 06:38:22] 2025-11-26 11:38:22,076 [wrapper] apfmon messages muted
[2025-11-26 06:38:22] 2025-11-26 11:38:22,078 [wrapper] ==== wrapper stdout END ====
[2025-11-26 06:38:22] 2025-11-26 11:38:22,081 [wrapper] ==== wrapper stderr END ====
[2025-11-26 06:38:22]  *** Error codes and diagnostics ***
[2025-11-26 06:38:22]     "exeErrorCode": 0,
[2025-11-26 06:38:22]     "exeErrorDiag": "",
[2025-11-26 06:38:22]     "pilotErrorCode": 0,
[2025-11-26 06:38:22]     "pilotErrorDiag": "",
[2025-11-26 06:38:22]  *** Listing of results directory ***
[2025-11-26 06:38:22] total 1323856
[2025-11-26 06:38:22] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 13:01 pilot3.tar.gz
[2025-11-26 06:38:22] -rwx------ 1 boincer umatlas     36292 Nov 24 13:14 runpilot2-wrapper.sh
[2025-11-26 06:38:22] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 13:14 queuedata.json
[2025-11-26 06:38:22] -rw-r--r-- 1 boincer umatlas       100 Nov 25 11:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 06:38:22] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 11:14 run_atlas
[2025-11-26 06:38:22] -rw-r--r-- 1 boincer umatlas       105 Nov 25 11:14 job.xml
[2025-11-26 06:38:22] -rw-r--r-- 2 boincer umatlas 407152057 Nov 25 11:14 EVNT.47483658._003027.pool.root.1
[2025-11-26 06:38:22] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 11:14 start_atlas.sh
[2025-11-26 06:38:22] drwxrwx--x 2 boincer umatlas      4096 Nov 25 11:14 shared
[2025-11-26 06:38:22] -rw-r--r-- 2 boincer umatlas    590102 Nov 25 11:14 input.tar.gz
[2025-11-26 06:38:22] -rw-r--r-- 1 boincer umatlas         0 Nov 25 11:14 boinc_lockfile
[2025-11-26 06:38:22] -rw-r--r-- 1 boincer umatlas      2783 Nov 25 11:14 pandaJob.out
[2025-11-26 06:38:22] -rw------- 1 boincer umatlas        57 Nov 25 11:14 setup.sh.local
[2025-11-26 06:38:22] -rw------- 1 boincer umatlas    991909 Nov 25 11:14 agis_schedconf.cvmfs.json
[2025-11-26 06:38:22] drwx------ 5 boincer umatlas      4096 Nov 25 11:14 pilot3
[2025-11-26 06:38:22] -rw-r--r-- 1 boincer umatlas       533 Nov 26 06:22 boinc_task_state.xml
[2025-11-26 06:38:22] -rw------- 1 boincer umatlas 920488341 Nov 26 06:37 HITS.47556173._000093.pool.root.1
[2025-11-26 06:38:22] -rw-r--r-- 1 boincer umatlas      5953 Nov 26 06:37 init_data.xml
[2025-11-26 06:38:22] -rw------- 1 boincer umatlas      1067 Nov 26 06:37 memory_monitor_summary.json
[2025-11-26 06:38:22] -rw------- 1 boincer umatlas   1516240 Nov 26 06:37 agis_ddmendpoints.agis.ALL.json
[2025-11-26 06:38:22] -rw------- 1 boincer umatlas   2329619 Nov 26 06:37 log.47556173._000093.job.log.tgz.1
[2025-11-26 06:38:22] -rw------- 1 boincer umatlas      8664 Nov 26 06:37 heartbeat.json
[2025-11-26 06:38:22] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 06:38 boinc_mmap_file
[2025-11-26 06:38:22] -rw-r--r-- 1 boincer umatlas        29 Nov 26 06:38 wrapper_checkpoint.txt
[2025-11-26 06:38:22] -rw------- 1 boincer umatlas        95 Nov 26 06:38 pilot_heartbeat.json
[2025-11-26 06:38:22] -rw------- 1 boincer umatlas      4821 Nov 26 06:38 pilotlog.txt
[2025-11-26 06:38:22] -rw------- 1 boincer umatlas   9700388 Nov 26 06:38 log.47556173._000093.job.log.1
[2025-11-26 06:38:22] -rw------- 1 boincer umatlas       353 Nov 26 06:38 output.list
[2025-11-26 06:38:22] -rw-r--r-- 1 boincer umatlas       620 Nov 26 06:38 runtime_log
[2025-11-26 06:38:22] -rw------- 1 boincer umatlas  12052480 Nov 26 06:38 result.tar.gz
[2025-11-26 06:38:22] -rw-r--r-- 1 boincer umatlas      9338 Nov 26 06:38 runtime_log.err
[2025-11-26 06:38:22] -rw------- 1 boincer umatlas       667 Nov 26 06:38 rFbLDmQGqh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmW9IKDmzpm8mn.diag
[2025-11-26 06:38:22] -rw-r--r-- 1 boincer umatlas     21389 Nov 26 06:38 stderr.txt
[2025-11-26 06:38:22] HITS file was successfully produced:
[2025-11-26 06:38:22] -rw------- 1 boincer umatlas 920488341 Nov 26 06:37 shared/HITS.pool.root.1
[2025-11-26 06:38:22]  *** Contents of shared directory: ***
[2025-11-26 06:38:22] total 1308904
[2025-11-26 06:38:22] -rw-r--r-- 2 boincer umatlas 407152057 Nov 25 11:14 ATLAS.root_0
[2025-11-26 06:38:22] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 11:14 start_atlas.sh
[2025-11-26 06:38:22] -rw-r--r-- 2 boincer umatlas    590102 Nov 25 11:14 input.tar.gz
[2025-11-26 06:38:22] -rw------- 1 boincer umatlas 920488341 Nov 26 06:37 HITS.pool.root.1
[2025-11-26 06:38:22] -rw------- 1 boincer umatlas  12052480 Nov 26 06:38 result.tar.gz
06:38:23 (10337): run_atlas exited; CPU time 534612.523456
06:38:23 (10337): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN