Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:48:22 (29849): wrapper (7.7.26015): starting
10:48:22 (29849): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 10:48:22] Arguments: --nthreads 8
[2025-11-25 10:48:22] Threads: 8
[2025-11-25 10:48:22] Checking for CVMFS
[2025-11-25 10:48:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 10:48:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 10:48:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 10:48:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 10:48:22] 2.11.2.0 24877 116443 142808 153287 0 82 16928575 18432001 1885 130560 0 84390436 99.974 4823044 31909 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 10:48:22] CVMFS is ok
[2025-11-25 10:48:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 10:48:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 10:48:22] Further information can be found at the LHC@home message board.
[2025-11-25 10:48:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 10:48:22] Checking for apptainer binary...
[2025-11-25 10:48:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 10:48:22] Running /usr/bin/apptainer --version
[2025-11-25 10:48:22] apptainer version 1.3.2-1.el7
[2025-11-25 10:48:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 10:48:23] c-206-3.aglt2.org
[2025-11-25 10:48:23] apptainer works
[2025-11-25 10:48:23] Set ATHENA_PROC_NUMBER=8
[2025-11-25 10:48:23] Set ATHENA_CORE_NUMBER=8
[2025-11-25 10:48:23] Starting ATLAS job with PandaID=6895350522
[2025-11-25 10:48:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 05:52:32]  *** The last 200 lines of the pilot log: ***
[2025-11-26 05:52:32] 2025-11-26 10:51:30,693 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 05:52:32] 2025-11-26 10:51:30,699 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2433.5416666666665
[2025-11-26 05:52:32] 2025-11-26 10:51:30,704 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895350522/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 05:52:32] 2025-11-26 10:51:30,705 | INFO     | extracted standard info from prmon json
[2025-11-26 05:52:32] 2025-11-26 10:51:30,705 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 05:52:32] 2025-11-26 10:51:30,705 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 05:52:32] 2025-11-26 10:51:30,735 | INFO     | fitting pss+swap vs Time
[2025-11-26 05:52:32] 2025-11-26 10:51:30,737 | INFO     | sum of square deviations: 440328890009.0094
[2025-11-26 05:52:32] 2025-11-26 10:51:30,781 | INFO     | sum of deviations: 1804545953740.8696
[2025-11-26 05:52:32] 2025-11-26 10:51:30,781 | INFO     | mean x: 1764119991.0516014
[2025-11-26 05:52:32] 2025-11-26 10:51:30,781 | INFO     | mean y: 2866508.1574733094
[2025-11-26 05:52:32] 2025-11-26 10:51:30,781 | INFO     | intersect: -7226810362.920442
[2025-11-26 05:52:32] 2025-11-26 10:51:30,783 | INFO     | chi2: 6.358183988130648
[2025-11-26 05:52:32] 2025-11-26 10:51:30,785 | INFO     | sum of square deviations: 434478904302.47845
[2025-11-26 05:52:32] 2025-11-26 10:51:30,828 | INFO     | sum of deviations: 2131541729804.8105
[2025-11-26 05:52:32] 2025-11-26 10:51:30,828 | INFO     | mean x: 1764119838.5540662
[2025-11-26 05:52:32] 2025-11-26 10:51:30,829 | INFO     | mean y: 2875030.019660411
[2025-11-26 05:52:32] 2025-11-26 10:51:30,829 | INFO     | intersect: -8651849088.960001
[2025-11-26 05:52:32] 2025-11-26 10:51:30,830 | INFO     | chi2: 3.8778222621786567
[2025-11-26 05:52:32] 2025-11-26 10:51:30,831 | INFO     | current chi2=3.8778222621786567 (change=39.01053713736955 %)
[2025-11-26 05:52:32] 2025-11-26 10:51:30,832 | INFO     | sum of square deviations: 428680966083.4399
[2025-11-26 05:52:32] 2025-11-26 10:51:30,876 | INFO     | sum of deviations: 2325167290329.4976
[2025-11-26 05:52:32] 2025-11-26 10:51:30,883 | INFO     | mean x: 1764119686.056553
[2025-11-26 05:52:32] 2025-11-26 10:51:30,883 | INFO     | mean y: 2880122.801615799
[2025-11-26 05:52:32] 2025-11-26 10:51:30,884 | INFO     | intersect: -9565712174.918076
[2025-11-26 05:52:32] 2025-11-26 10:51:30,885 | INFO     | chi2: 2.943131224920183
[2025-11-26 05:52:32] 2025-11-26 10:51:30,885 | INFO     | current chi2=2.943131224920183 (change=24.10350382416292 %)
[2025-11-26 05:52:32] 2025-11-26 10:51:30,886 | INFO     | right removable region: 1113
[2025-11-26 05:52:32] 2025-11-26 10:51:30,887 | INFO     | sum of square deviations: 434478526102.479
[2025-11-26 05:52:32] 2025-11-26 10:51:30,930 | INFO     | sum of deviations: 1513442523786.6382
[2025-11-26 05:52:32] 2025-11-26 10:51:30,930 | INFO     | mean x: 1764120143.5540662
[2025-11-26 05:52:32] 2025-11-26 10:51:30,930 | INFO     | mean y: 2874087.5844504023
[2025-11-26 05:52:32] 2025-11-26 10:51:30,931 | INFO     | intersect: -6142180919.561226
[2025-11-26 05:52:32] 2025-11-26 10:51:30,932 | INFO     | chi2: 4.315301542614624
[2025-11-26 05:52:32] 2025-11-26 10:51:30,932 | INFO     | current chi2=4.315301542614624 (change=32.12996744557318 %)
[2025-11-26 05:52:32] 2025-11-26 10:51:30,934 | INFO     | sum of square deviations: 428680209683.43976
[2025-11-26 05:52:32] 2025-11-26 10:51:30,977 | INFO     | sum of deviations: 1441494434115.1619
[2025-11-26 05:52:32] 2025-11-26 10:51:30,977 | INFO     | mean x: 1764120296.056553
[2025-11-26 05:52:32] 2025-11-26 10:51:30,977 | INFO     | mean y: 2875979.5053859963
[2025-11-26 05:52:32] 2025-11-26 10:51:30,978 | INFO     | intersect: -5929214027.059126
[2025-11-26 05:52:32] 2025-11-26 10:51:30,979 | INFO     | chi2: 4.261026411175627
[2025-11-26 05:52:32] 2025-11-26 10:51:30,979 | INFO     | current chi2=4.261026411175627 (change=1.257736705141398 %)
[2025-11-26 05:52:32] 2025-11-26 10:51:30,979 | INFO     | left removable region: 20
[2025-11-26 05:52:32] 2025-11-26 10:51:30,981 | INFO     | sum of square deviations: 404891222856.3071
[2025-11-26 05:52:32] 2025-11-26 10:51:31,022 | INFO     | sum of deviations: 1900677480491.3557
[2025-11-26 05:52:32] 2025-11-26 10:51:31,022 | INFO     | mean x: 1764120265.5672462
[2025-11-26 05:52:32] 2025-11-26 10:51:31,023 | INFO     | mean y: 2893201.0155535224
[2025-11-26 05:52:32] 2025-11-26 10:51:31,023 | INFO     | intersect: -8278401804.561926
[2025-11-26 05:52:32] 2025-11-26 10:51:31,024 | INFO     | chi2: 0.6779305706661861
[2025-11-26 05:52:32] 2025-11-26 10:51:31,025 | INFO     | current memory leak: 4.69 B/s (using 1093 data points, chi2=0.68)
[2025-11-26 05:52:32] 2025-11-26 10:51:31,026 | INFO     | could have reported an average CPU frequency of 2628 MHz (41 samples)
[2025-11-26 05:52:32] 2025-11-26 10:51:31,026 | INFO     | ..............................
[2025-11-26 05:52:32] 2025-11-26 10:51:31,026 | INFO     | . Timing measurements:
[2025-11-26 05:52:32] 2025-11-26 10:51:31,026 | INFO     | . get job = 0 s
[2025-11-26 05:52:32] 2025-11-26 10:51:31,027 | INFO     | . initial setup = 2 s
[2025-11-26 05:52:32] 2025-11-26 10:51:31,027 | INFO     | . payload setup = 5 s
[2025-11-26 05:52:32] 2025-11-26 10:51:31,027 | INFO     | . stage-in = 0 s
[2025-11-26 05:52:32] 2025-11-26 10:51:31,027 | INFO     | . payload execution = 68541 s
[2025-11-26 05:52:32] 2025-11-26 10:51:31,027 | INFO     | . stage-out = 4 s
[2025-11-26 05:52:32] 2025-11-26 10:51:31,028 | INFO     | . log creation = 0 s
[2025-11-26 05:52:32] 2025-11-26 10:51:31,028 | INFO     | ..............................
[2025-11-26 05:52:32] 2025-11-26 10:51:31,173 | INFO     | time since job start (68577s) is within the limit (172800.0s)
[2025-11-26 05:52:32] 2025-11-26 10:51:31,661 | INFO     | 
[2025-11-26 05:52:32] 2025-11-26 10:51:31,661 | INFO     | job summary report
[2025-11-26 05:52:32] 2025-11-26 10:51:31,661 | INFO     | --------------------------------------------------
[2025-11-26 05:52:32] 2025-11-26 10:51:31,661 | INFO     | PanDA job id: 6895350522
[2025-11-26 05:52:32] 2025-11-26 10:51:31,661 | INFO     | task id: 47556149
[2025-11-26 05:52:32] 2025-11-26 10:51:31,662 | INFO     | errors: (none)
[2025-11-26 05:52:32] 2025-11-26 10:51:31,662 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 05:52:32] 2025-11-26 10:51:31,662 | INFO     | pilot state: finished 
[2025-11-26 05:52:32] 2025-11-26 10:51:31,662 | INFO     | transexitcode: 0
[2025-11-26 05:52:32] 2025-11-26 10:51:31,662 | INFO     | exeerrorcode: 0
[2025-11-26 05:52:32] 2025-11-26 10:51:31,662 | INFO     | exeerrordiag: 
[2025-11-26 05:52:32] 2025-11-26 10:51:31,663 | INFO     | exitcode: 0
[2025-11-26 05:52:32] 2025-11-26 10:51:31,663 | INFO     | exitmsg: OK
[2025-11-26 05:52:32] 2025-11-26 10:51:31,663 | INFO     | cpuconsumptiontime: 533336 s
[2025-11-26 05:52:32] 2025-11-26 10:51:31,663 | INFO     | nevents: 1000
[2025-11-26 05:52:32] 2025-11-26 10:51:31,663 | INFO     | neventsw: 0
[2025-11-26 05:52:32] 2025-11-26 10:51:31,663 | INFO     | pid: 7644
[2025-11-26 05:52:32] 2025-11-26 10:51:31,664 | INFO     | pgrp: 7644
[2025-11-26 05:52:32] 2025-11-26 10:51:31,664 | INFO     | corecount: 8
[2025-11-26 05:52:32] 2025-11-26 10:51:31,664 | INFO     | event service: False
[2025-11-26 05:52:32] 2025-11-26 10:51:31,664 | INFO     | sizes: {0: 2284149, 1: 2284291, 4: 2284553, 11: 2284581, 68549: 2340585, 68555: 2349763, 68561: 2350049}
[2025-11-26 05:52:32] 2025-11-26 10:51:31,664 | INFO     | --------------------------------------------------
[2025-11-26 05:52:32] 2025-11-26 10:51:31,665 | INFO     | 
[2025-11-26 05:52:32] 2025-11-26 10:51:31,665 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 05:52:32] 2025-11-26 10:51:31,683 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 05:52:32] 2025-11-26 10:51:31,684 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 05:52:32] 2025-11-26 10:51:31,684 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 05:52:32] 2025-11-26 10:51:31,684 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 05:52:32] 2025-11-26 10:51:31,684 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 05:52:32] 2025-11-26 10:51:31,684 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 05:52:32] 2025-11-26 10:51:31,684 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 05:52:32] 2025-11-26 10:51:31,685 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 05:52:32] 2025-11-26 10:51:31,685 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 05:52:32] 2025-11-26 10:51:31,685 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 05:52:32] 2025-11-26 10:51:31,685 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 05:52:32] 2025-11-26 10:51:31,685 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 05:52:32] 2025-11-26 10:51:31,686 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 05:52:32] 2025-11-26 10:51:31,686 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 05:52:32] 2025-11-26 10:51:31,686 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 05:52:32] 2025-11-26 10:51:31,686 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 05:52:32] 2025-11-26 10:51:31,686 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 05:52:32] 2025-11-26 10:51:31,687 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 05:52:32] 2025-11-26 10:51:31,687 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 05:52:32] 2025-11-26 10:51:31,687 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 05:52:32] 2025-11-26 10:51:31,687 | INFO     | job 6895350522 has completed (purged errors)
[2025-11-26 05:52:32] 2025-11-26 10:51:31,687 | INFO     | overall cleanup function is called
[2025-11-26 05:52:32] 2025-11-26 10:51:32,704 | INFO     | --- collectZombieJob: --- 10, [7644]
[2025-11-26 05:52:32] 2025-11-26 10:51:32,704 | INFO     | zombie collector waiting for pid 7644
[2025-11-26 05:52:32] 2025-11-26 10:51:32,705 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 05:52:32] 2025-11-26 10:51:32,705 | INFO     | collected zombie processes
[2025-11-26 05:52:32] 2025-11-26 10:51:32,705 | INFO     | will attempt to kill all subprocesses of pid=7644
[2025-11-26 05:52:32] 2025-11-26 10:51:32,864 | INFO     | process IDs to be killed: [7644] (in reverse order)
[2025-11-26 05:52:32] 2025-11-26 10:51:32,907 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 05:52:32] 2025-11-26 10:51:32,907 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 05:52:32] 2025-11-26 10:51:32,910 | INFO     | did not find any defunct processes belonging to 7644
[2025-11-26 05:52:32] 2025-11-26 10:51:32,912 | INFO     | did not find any defunct processes belonging to 7644
[2025-11-26 05:52:32] 2025-11-26 10:51:32,913 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 05:52:32] 2025-11-26 10:51:32,914 | INFO     | ready for new job
[2025-11-26 05:52:32] 2025-11-26 10:51:32,914 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 05:52:32] 2025-11-26 10:51:32,917 | INFO     | ***************************************
[2025-11-26 05:52:32] 2025-11-26 10:51:32,917 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 05:52:32] 2025-11-26 10:51:32,918 | INFO     | ***************************************
[2025-11-26 05:52:32] 2025-11-26 10:51:32,918 | INFO     | 
[2025-11-26 05:52:32] 2025-11-26 10:51:32,919 | INFO     | architecture information:
[2025-11-26 05:52:32] 2025-11-26 10:51:32,919 | INFO     | executing command: cat /etc/os-release
[2025-11-26 05:52:32] 2025-11-26 10:51:32,931 | INFO     | cat /etc/os-release:
[2025-11-26 05:52:32] NAME="CentOS Linux"
[2025-11-26 05:52:32] VERSION="7 (Core)"
[2025-11-26 05:52:32] ID="centos"
[2025-11-26 05:52:32] ID_LIKE="rhel fedora"
[2025-11-26 05:52:32] VERSION_ID="7"
[2025-11-26 05:52:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 05:52:32] ANSI_COLOR="0;31"
[2025-11-26 05:52:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 05:52:32] HOME_URL="https://www.centos.org/"
[2025-11-26 05:52:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 05:52:32] 
[2025-11-26 05:52:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 05:52:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 05:52:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 05:52:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 05:52:32] 
[2025-11-26 05:52:32] 2025-11-26 10:51:32,932 | INFO     | ***************************************
[2025-11-26 05:52:32] 2025-11-26 10:51:33,434 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 05:52:32] 2025-11-26 10:51:33,453 | INFO     | sufficient remaining disk space (25617760256 B)
[2025-11-26 05:52:32] 2025-11-26 10:51:33,453 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 05:52:32] 2025-11-26 10:51:33,454 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 05:52:32] 2025-11-26 10:51:33,454 | INFO     | update_server=False
[2025-11-26 05:52:32] 2025-11-26 10:51:33,454 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 05:52:32] 2025-11-26 10:51:33,454 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 05:52:32] 2025-11-26 10:51:33,741 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 05:52:32] 2025-11-26 10:51:33,741 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 05:52:32] 2025-11-26 10:51:33,742 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 05:52:32] 2025-11-26 10:51:33,742 | INFO     | will abort loop
[2025-11-26 05:52:32] 2025-11-26 10:51:33,879 | INFO     | all job control threads have been joined
[2025-11-26 05:52:32] 2025-11-26 10:51:33,931 | INFO     | all data control threads have been joined
[2025-11-26 05:52:32] 2025-11-26 10:51:34,455 | INFO     | [job] retrieve thread has finished
[2025-11-26 05:52:32] 2025-11-26 10:51:34,549 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 05:52:32] 2025-11-26 10:51:34,747 | INFO     | [job] job monitor thread has finished
[2025-11-26 05:52:32] 2025-11-26 10:51:34,750 | INFO     | [payload] failed_post thread has finished
[2025-11-26 05:52:32] 2025-11-26 10:51:34,784 | INFO     | [payload] validate_post thread has finished
[2025-11-26 05:52:32] 2025-11-26 10:51:34,881 | INFO     | all payload control threads have been joined
[2025-11-26 05:52:32] 2025-11-26 10:51:34,885 | INFO     | [job] control thread has finished
[2025-11-26 05:52:32] 2025-11-26 10:51:34,936 | INFO     | [data] control thread has finished
[2025-11-26 05:52:32] 2025-11-26 10:51:35,090 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 05:52:32] 2025-11-26 10:51:35,177 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 05:52:32] 2025-11-26 10:51:35,178 | INFO     | [data] copytool_in thread has finished
[2025-11-26 05:52:32] 2025-11-26 10:51:35,208 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 05:52:32] 2025-11-26 10:51:35,461 | INFO     | [data] copytool_out thread has finished
[2025-11-26 05:52:32] 2025-11-26 10:51:35,595 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 05:52:32] 2025-11-26 10:51:35,649 | INFO     | [job] validate thread has finished
[2025-11-26 05:52:32] 2025-11-26 10:51:35,883 | INFO     | [payload] control thread has finished
[2025-11-26 05:52:32] 2025-11-26 10:51:36,197 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 05:52:32] 2025-11-26 10:51:37,202 | INFO     | [job] queue monitor thread has finished
[2025-11-26 05:52:32] 2025-11-26 10:51:39,601 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 05:52:32] 2025-11-26 10:52:04,413 | INFO     | PID=1099 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-26 05:52:32] 2025-11-26 10:52:04,413 | INFO     | .. there are 3 such processes running
[2025-11-26 05:52:32] 2025-11-26 10:52:04,414 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 05:52:32] 2025-11-26 10:52:04,414 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 05:52:32] 2025-11-26 10:52:04,415 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 05:52:32] 2025-11-26 10:52:27,249 | INFO     | [monitor] cgroup control has ended
[2025-11-26 05:52:32] 2025-11-26 10:52:27,656 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139653020223296)>', '<ExcThread(monitor, started 139652463847168)>']
[2025-11-26 05:52:32] 2025-11-26 10:52:28,533 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 05:52:32] 2025-11-26 10:52:28,533 | INFO     | [monitor] control thread has ended
[2025-11-26 05:52:32] 2025-11-26 10:52:32,668 | INFO     | all workflow threads have been joined
[2025-11-26 05:52:32] 2025-11-26 10:52:32,668 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 05:52:32] 2025-11-26 10:52:32,668 | INFO     | traces error code: 0
[2025-11-26 05:52:32] 2025-11-26 10:52:32,669 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 05:52:32] 2025-11-26 10:52:32,787 [wrapper] ==== pilot stdout END ====
[2025-11-26 05:52:32] 2025-11-26 10:52:32,791 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 05:52:32] 2025-11-26 10:52:32,793 [wrapper] pilotpid: 1099
[2025-11-26 05:52:32] 2025-11-26 10:52:32,796 [wrapper] Pilot exit status: 0
[2025-11-26 05:52:32] 2025-11-26 10:52:32,805 [wrapper] pandaids: 6895350522
[2025-11-26 05:52:32] 2025-11-26 10:52:32,837 [wrapper] cleanup supervisor_pilot 17910 1100
[2025-11-26 05:52:32] 2025-11-26 10:52:32,839 [wrapper] Test setup, not cleaning
[2025-11-26 05:52:32] 2025-11-26 10:52:32,842 [wrapper] apfmon messages muted
[2025-11-26 05:52:32] 2025-11-26 10:52:32,845 [wrapper] ==== wrapper stdout END ====
[2025-11-26 05:52:32] 2025-11-26 10:52:32,847 [wrapper] ==== wrapper stderr END ====
[2025-11-26 05:52:32]  *** Error codes and diagnostics ***
[2025-11-26 05:52:32]     "exeErrorCode": 0,
[2025-11-26 05:52:32]     "exeErrorDiag": "",
[2025-11-26 05:52:32]     "pilotErrorCode": 0,
[2025-11-26 05:52:32]     "pilotErrorDiag": "",
[2025-11-26 05:52:32]  *** Listing of results directory ***
[2025-11-26 05:52:32] total 1331732
[2025-11-26 05:52:32] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 16:27 pilot3.tar.gz
[2025-11-26 05:52:32] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 16:33 queuedata.json
[2025-11-26 05:52:32] -rwx------ 1 boincer umatlas     36292 Nov 22 16:34 runpilot2-wrapper.sh
[2025-11-26 05:52:32] -rw-r--r-- 1 boincer umatlas       100 Nov 25 10:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 05:52:32] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 10:48 run_atlas
[2025-11-26 05:52:32] -rw-r--r-- 1 boincer umatlas       105 Nov 25 10:48 job.xml
[2025-11-26 05:52:32] -rw-r--r-- 2 boincer umatlas 410889327 Nov 25 10:48 EVNT.47483658._001117.pool.root.1
[2025-11-26 05:52:32] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 10:48 start_atlas.sh
[2025-11-26 05:52:32] drwxrwx--x 2 boincer umatlas      4096 Nov 25 10:48 shared
[2025-11-26 05:52:32] -rw-r--r-- 2 boincer umatlas    590104 Nov 25 10:48 input.tar.gz
[2025-11-26 05:52:32] -rw-r--r-- 1 boincer umatlas         0 Nov 25 10:48 boinc_lockfile
[2025-11-26 05:52:32] -rw-r--r-- 1 boincer umatlas      2784 Nov 25 10:48 pandaJob.out
[2025-11-26 05:52:32] -rw------- 1 boincer umatlas        57 Nov 25 10:48 setup.sh.local
[2025-11-26 05:52:32] -rw------- 1 boincer umatlas    991909 Nov 25 10:48 agis_schedconf.cvmfs.json
[2025-11-26 05:52:32] drwx------ 5 boincer umatlas      4096 Nov 25 10:48 pilot3
[2025-11-26 05:52:32] -rw-r--r-- 1 boincer umatlas       533 Nov 26 05:31 boinc_task_state.xml
[2025-11-26 05:52:32] -rw-r--r-- 1 boincer umatlas      5953 Nov 26 05:49 init_data.xml
[2025-11-26 05:52:32] -rw------- 1 boincer umatlas 925306931 Nov 26 05:50 HITS.47556149._001037.pool.root.1
[2025-11-26 05:52:32] -rw------- 1 boincer umatlas      1067 Nov 26 05:51 memory_monitor_summary.json
[2025-11-26 05:52:32] -rw------- 1 boincer umatlas   1516240 Nov 26 05:51 agis_ddmendpoints.agis.ALL.json
[2025-11-26 05:52:32] -rw------- 1 boincer umatlas   2300473 Nov 26 05:51 log.47556149._001037.job.log.tgz.1
[2025-11-26 05:52:32] -rw------- 1 boincer umatlas      8676 Nov 26 05:51 heartbeat.json
[2025-11-26 05:52:32] -rw------- 1 boincer umatlas        95 Nov 26 05:52 pilot_heartbeat.json
[2025-11-26 05:52:32] -rw-r--r-- 1 boincer umatlas        29 Nov 26 05:52 wrapper_checkpoint.txt
[2025-11-26 05:52:32] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 05:52 boinc_mmap_file
[2025-11-26 05:52:32] -rw------- 1 boincer umatlas      5006 Nov 26 05:52 pilotlog.txt
[2025-11-26 05:52:32] -rw------- 1 boincer umatlas   9484737 Nov 26 05:52 log.47556149._001037.job.log.1
[2025-11-26 05:52:32] -rw------- 1 boincer umatlas       353 Nov 26 05:52 output.list
[2025-11-26 05:52:32] -rw-r--r-- 1 boincer umatlas       620 Nov 26 05:52 runtime_log
[2025-11-26 05:52:32] -rw------- 1 boincer umatlas  11806720 Nov 26 05:52 result.tar.gz
[2025-11-26 05:52:32] -rw------- 1 boincer umatlas       667 Nov 26 05:52 WDyLDmDQAh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmEQKKDmetTGWm.diag
[2025-11-26 05:52:32] -rw-r--r-- 1 boincer umatlas      9338 Nov 26 05:52 runtime_log.err
[2025-11-26 05:52:32] -rw-r--r-- 1 boincer umatlas     21252 Nov 26 05:52 stderr.txt
[2025-11-26 05:52:32] HITS file was successfully produced:
[2025-11-26 05:52:32] -rw------- 1 boincer umatlas 925306931 Nov 26 05:50 shared/HITS.pool.root.1
[2025-11-26 05:52:32]  *** Contents of shared directory: ***
[2025-11-26 05:52:32] total 1317020
[2025-11-26 05:52:32] -rw-r--r-- 2 boincer umatlas 410889327 Nov 25 10:48 ATLAS.root_0
[2025-11-26 05:52:32] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 10:48 start_atlas.sh
[2025-11-26 05:52:32] -rw-r--r-- 2 boincer umatlas    590104 Nov 25 10:48 input.tar.gz
[2025-11-26 05:52:32] -rw------- 1 boincer umatlas 925306931 Nov 26 05:50 HITS.pool.root.1
[2025-11-26 05:52:32] -rw------- 1 boincer umatlas  11806720 Nov 26 05:52 result.tar.gz
05:52:34 (29849): run_atlas exited; CPU time 532902.657491
05:52:35 (29849): called boinc_finish(0)

</stderr_txt>
]]>

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