Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
12:16:57 (21122): wrapper (7.7.26015): starting
12:16:57 (21122): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 12:16:57] Arguments: --nthreads 12
[2025-11-26 12:16:57] Threads: 12
[2025-11-26 12:16:57] Checking for CVMFS
[2025-11-26 12:16:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 12:17:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 12:17:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 12:17:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 12:17:07] 2.13.0.0 3511 13 61288 153320 2 49 3619231 4096001 948 130560 0 59290 99.968 5411 364 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://128.142.248.156:3125 1
[2025-11-26 12:17:07] CVMFS is ok
[2025-11-26 12:17:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 12:17:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 12:17:07] Further information can be found at the LHC@home message board.
[2025-11-26 12:17:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 12:17:07] Checking for apptainer binary...
[2025-11-26 12:17:07] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin)
[2025-11-26 12:17:07] apptainer is not installed, using version from CVMFS
[2025-11-26 12:17:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 12:17:09] dagobert
[2025-11-26 12:17:09] apptainer works
[2025-11-26 12:17:09] Set ATHENA_PROC_NUMBER=12
[2025-11-26 12:17:09] Set ATHENA_CORE_NUMBER=12
[2025-11-26 12:17:09] Starting ATLAS job with PandaID=6895674643
[2025-11-26 12:17:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 17:16:12]  *** The last 200 lines of the pilot log: ***
[2025-11-26 17:16:12] 2025-11-26 16:15:21,607 | INFO     | time since job start (17804s) is within the limit (172800.0s)
[2025-11-26 17:16:12] 2025-11-26 16:15:23,082 | INFO     | monitor loop #1318: job 0:6895674643 is in state 'finished'
[2025-11-26 17:16:12] 2025-11-26 16:15:23,082 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 17:16:12] 2025-11-26 16:15:23,612 | INFO     | time since job start (17806s) is within the limit (172800.0s)
[2025-11-26 17:16:12] 2025-11-26 16:15:24,349 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 17:16:12] 2025-11-26 16:15:24,350 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3818.7593333333334
[2025-11-26 17:16:12] 2025-11-26 16:15:24,350 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6895674643/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 17:16:12] 2025-11-26 16:15:24,351 | INFO     | extracted standard info from prmon json
[2025-11-26 17:16:12] 2025-11-26 16:15:24,351 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 17:16:12] 2025-11-26 16:15:24,351 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 17:16:12] 2025-11-26 16:15:24,352 | INFO     | fitting pss+swap vs Time
[2025-11-26 17:16:12] 2025-11-26 16:15:24,352 | INFO     | sum of square deviations: 7484370423.121122
[2025-11-26 17:16:12] 2025-11-26 16:15:24,353 | INFO     | sum of deviations: 322586788561.0795
[2025-11-26 17:16:12] 2025-11-26 16:15:24,353 | INFO     | mean x: 1764164876.633218
[2025-11-26 17:16:12] 2025-11-26 16:15:24,353 | INFO     | mean y: 3476506.3875432527
[2025-11-26 17:16:12] 2025-11-26 16:15:24,353 | INFO     | intersect: -76034486591.65472
[2025-11-26 17:16:12] 2025-11-26 16:15:24,353 | INFO     | chi2: 5.245839354163908
[2025-11-26 17:16:12] 2025-11-26 16:15:24,353 | INFO     | sum of square deviations: 7102633031.080981
[2025-11-26 17:16:12] 2025-11-26 16:15:24,354 | INFO     | sum of deviations: 346354631539.926
[2025-11-26 17:16:12] 2025-11-26 16:15:24,354 | INFO     | mean x: 1764164724.1443663
[2025-11-26 17:16:12] 2025-11-26 16:15:24,354 | INFO     | mean y: 3485824.1725352113
[2025-11-26 17:16:12] 2025-11-26 16:15:24,354 | INFO     | intersect: -86024698418.61699
[2025-11-26 17:16:12] 2025-11-26 16:15:24,354 | INFO     | chi2: 4.5584248246993315
[2025-11-26 17:16:12] 2025-11-26 16:15:24,354 | INFO     | current chi2=4.5584248246993315 (change=13.103995053126022 %)
[2025-11-26 17:16:12] 2025-11-26 16:15:24,354 | INFO     | right removable region: 283
[2025-11-26 17:16:12] 2025-11-26 16:15:24,354 | INFO     | sum of square deviations: 7102521401.080981
[2025-11-26 17:16:12] 2025-11-26 16:15:24,354 | INFO     | sum of deviations: 186269359517.47183
[2025-11-26 17:16:12] 2025-11-26 16:15:24,354 | INFO     | mean x: 1764165029.1443663
[2025-11-26 17:16:12] 2025-11-26 16:15:24,354 | INFO     | mean y: 3530913.232394366
[2025-11-26 17:16:12] 2025-11-26 16:15:24,355 | INFO     | intersect: -46263121660.57468
[2025-11-26 17:16:12] 2025-11-26 16:15:24,355 | INFO     | chi2: 1.1360441686418947
[2025-11-26 17:16:12] 2025-11-26 16:15:24,355 | INFO     | current chi2=1.1360441686418947 (change=78.34390090996297 %)
[2025-11-26 17:16:12] 2025-11-26 16:15:24,355 | INFO     | sum of square deviations: 6733916699.577063
[2025-11-26 17:16:12] 2025-11-26 16:15:24,355 | INFO     | sum of deviations: 147136618669.16135
[2025-11-26 17:16:12] 2025-11-26 16:15:24,355 | INFO     | mean x: 1764165181.6487455
[2025-11-26 17:16:12] 2025-11-26 16:15:24,355 | INFO     | mean y: 3547017.0322580645
[2025-11-26 17:16:12] 2025-11-26 16:15:24,355 | INFO     | intersect: -38543603353.563545
[2025-11-26 17:16:12] 2025-11-26 16:15:24,355 | INFO     | chi2: 0.7485722036771132
[2025-11-26 17:16:12] 2025-11-26 16:15:24,355 | INFO     | current chi2=0.7485722036771132 (change=34.10712150637524 %)
[2025-11-26 17:16:12] 2025-11-26 16:15:24,356 | INFO     | sum of square deviations: 6378306126.864994
[2025-11-26 17:16:12] 2025-11-26 16:15:24,356 | INFO     | sum of deviations: 133601197118.46706
[2025-11-26 17:16:12] 2025-11-26 16:15:24,356 | INFO     | mean x: 1764165334.149635
[2025-11-26 17:16:12] 2025-11-26 16:15:24,356 | INFO     | mean y: 3552815.6715328465
[2025-11-26 17:16:12] 2025-11-26 16:15:24,356 | INFO     | intersect: -36948985345.60642
[2025-11-26 17:16:12] 2025-11-26 16:15:24,356 | INFO     | chi2: 0.741507035925428
[2025-11-26 17:16:12] 2025-11-26 16:15:24,356 | INFO     | current chi2=0.741507035925428 (change=0.9438191422256795 %)
[2025-11-26 17:16:12] 2025-11-26 16:15:24,356 | INFO     | left removable region: 30
[2025-11-26 17:16:12] 2025-11-26 16:15:24,356 | INFO     | sum of square deviations: 5021301188.766785
[2025-11-26 17:16:12] 2025-11-26 16:15:24,357 | INFO     | sum of deviations: 131402489043.89325
[2025-11-26 17:16:12] 2025-11-26 16:15:24,357 | INFO     | mean x: 1764165608.660079
[2025-11-26 17:16:12] 2025-11-26 16:15:24,357 | INFO     | mean y: 3575469.3359683794
[2025-11-26 17:16:12] 2025-11-26 16:15:24,357 | INFO     | intersect: -46162894803.78113
[2025-11-26 17:16:12] 2025-11-26 16:15:24,357 | INFO     | chi2: 0.016212685917717306
[2025-11-26 17:16:12] 2025-11-26 16:15:24,357 | INFO     | current memory leak: 26.17 B/s (using 253 data points, chi2=0.02)
[2025-11-26 17:16:12] 2025-11-26 16:15:24,357 | INFO     | could have reported an average CPU frequency of 4503 MHz (13 samples)
[2025-11-26 17:16:12] 2025-11-26 16:15:24,357 | INFO     | ..............................
[2025-11-26 17:16:12] 2025-11-26 16:15:24,357 | INFO     | . Timing measurements:
[2025-11-26 17:16:12] 2025-11-26 16:15:24,357 | INFO     | . get job = 0 s
[2025-11-26 17:16:12] 2025-11-26 16:15:24,357 | INFO     | . initial setup = 6 s
[2025-11-26 17:16:12] 2025-11-26 16:15:24,357 | INFO     | . payload setup = 54 s
[2025-11-26 17:16:12] 2025-11-26 16:15:24,357 | INFO     | . stage-in = 0 s
[2025-11-26 17:16:12] 2025-11-26 16:15:24,357 | INFO     | . payload execution = 17644 s
[2025-11-26 17:16:12] 2025-11-26 16:15:24,357 | INFO     | . stage-out = 1 s
[2025-11-26 17:16:12] 2025-11-26 16:15:24,357 | INFO     | . log creation = 0 s
[2025-11-26 17:16:12] 2025-11-26 16:15:24,357 | INFO     | ..............................
[2025-11-26 17:16:12] 2025-11-26 16:15:24,379 | INFO     | 
[2025-11-26 17:16:12] 2025-11-26 16:15:24,379 | INFO     | job summary report
[2025-11-26 17:16:12] 2025-11-26 16:15:24,379 | INFO     | --------------------------------------------------
[2025-11-26 17:16:12] 2025-11-26 16:15:24,379 | INFO     | PanDA job id: 6895674643
[2025-11-26 17:16:12] 2025-11-26 16:15:24,379 | INFO     | task id: 47556149
[2025-11-26 17:16:12] 2025-11-26 16:15:24,379 | INFO     | errors: (none)
[2025-11-26 17:16:12] 2025-11-26 16:15:24,379 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 17:16:12] 2025-11-26 16:15:24,379 | INFO     | pilot state: finished 
[2025-11-26 17:16:12] 2025-11-26 16:15:24,379 | INFO     | transexitcode: 0
[2025-11-26 17:16:12] 2025-11-26 16:15:24,379 | INFO     | exeerrorcode: 0
[2025-11-26 17:16:12] 2025-11-26 16:15:24,379 | INFO     | exeerrordiag: 
[2025-11-26 17:16:12] 2025-11-26 16:15:24,379 | INFO     | exitcode: 0
[2025-11-26 17:16:12] 2025-11-26 16:15:24,379 | INFO     | exitmsg: OK
[2025-11-26 17:16:12] 2025-11-26 16:15:24,379 | INFO     | cpuconsumptiontime: 110327 s
[2025-11-26 17:16:12] 2025-11-26 16:15:24,379 | INFO     | nevents: 1000
[2025-11-26 17:16:12] 2025-11-26 16:15:24,379 | INFO     | neventsw: 0
[2025-11-26 17:16:12] 2025-11-26 16:15:24,379 | INFO     | pid: 31613
[2025-11-26 17:16:12] 2025-11-26 16:15:24,379 | INFO     | pgrp: 31613
[2025-11-26 17:16:12] 2025-11-26 16:15:24,379 | INFO     | corecount: 12
[2025-11-26 17:16:12] 2025-11-26 16:15:24,379 | INFO     | event service: False
[2025-11-26 17:16:12] 2025-11-26 16:15:24,379 | INFO     | sizes: {0: 2283436, 1: 2284292, 12: 2284292, 22: 2284320, 33: 2284348, 43: 2284666, 44: 2284822, 17702: 2317991, 17703: 2326985, 17704: 2327041, 17722: 2327287}
[2025-11-26 17:16:12] 2025-11-26 16:15:24,379 | INFO     | --------------------------------------------------
[2025-11-26 17:16:12] 2025-11-26 16:15:24,380 | INFO     | 
[2025-11-26 17:16:12] 2025-11-26 16:15:24,380 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-11-26 17:16:12] 2025-11-26 16:15:24,388 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 17:16:12] 2025-11-26 16:15:24,388 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 17:16:12] 2025-11-26 16:15:24,388 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 17:16:12] 2025-11-26 16:15:24,388 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 17:16:12] 2025-11-26 16:15:24,388 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 17:16:12] 2025-11-26 16:15:24,388 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 17:16:12] 2025-11-26 16:15:24,388 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 17:16:12] 2025-11-26 16:15:24,388 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 17:16:12] 2025-11-26 16:15:24,388 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 17:16:12] 2025-11-26 16:15:24,388 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 17:16:12] 2025-11-26 16:15:24,388 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 17:16:12] 2025-11-26 16:15:24,388 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 17:16:12] 2025-11-26 16:15:24,388 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 17:16:12] 2025-11-26 16:15:24,388 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 17:16:12] 2025-11-26 16:15:24,388 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 17:16:12] 2025-11-26 16:15:24,388 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 17:16:12] 2025-11-26 16:15:24,388 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 17:16:12] 2025-11-26 16:15:24,388 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 17:16:12] 2025-11-26 16:15:24,388 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 17:16:12] 2025-11-26 16:15:24,388 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 17:16:12] 2025-11-26 16:15:24,388 | INFO     | job 6895674643 has completed (purged errors)
[2025-11-26 17:16:12] 2025-11-26 16:15:24,389 | INFO     | overall cleanup function is called
[2025-11-26 17:16:12] 2025-11-26 16:15:25,400 | INFO     | --- collectZombieJob: --- 10, [31613]
[2025-11-26 17:16:12] 2025-11-26 16:15:25,400 | INFO     | zombie collector waiting for pid 31613
[2025-11-26 17:16:12] 2025-11-26 16:15:25,400 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 17:16:12] 2025-11-26 16:15:25,400 | INFO     | collected zombie processes
[2025-11-26 17:16:12] 2025-11-26 16:15:25,400 | INFO     | will attempt to kill all subprocesses of pid=31613
[2025-11-26 17:16:12] 2025-11-26 16:15:25,441 | INFO     | process IDs to be killed: [31613] (in reverse order)
[2025-11-26 17:16:12] 2025-11-26 16:15:25,459 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 17:16:12] 2025-11-26 16:15:25,459 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 17:16:12] 2025-11-26 16:15:25,460 | INFO     | did not find any defunct processes belonging to 31613
[2025-11-26 17:16:12] 2025-11-26 16:15:25,461 | INFO     | did not find any defunct processes belonging to 31613
[2025-11-26 17:16:12] 2025-11-26 16:15:25,461 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 17:16:12] 2025-11-26 16:15:25,461 | INFO     | ready for new job
[2025-11-26 17:16:12] 2025-11-26 16:15:25,461 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 17:16:12] 2025-11-26 16:15:25,462 | INFO     | ***************************************
[2025-11-26 17:16:12] 2025-11-26 16:15:25,462 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 17:16:12] 2025-11-26 16:15:25,462 | INFO     | ***************************************
[2025-11-26 17:16:12] 2025-11-26 16:15:25,462 | INFO     | 
[2025-11-26 17:16:12] 2025-11-26 16:15:25,462 | INFO     | architecture information:
[2025-11-26 17:16:12] 2025-11-26 16:15:25,462 | INFO     | executing command: cat /etc/os-release
[2025-11-26 17:16:12] 2025-11-26 16:15:25,468 | INFO     | cat /etc/os-release:
[2025-11-26 17:16:12] NAME="CentOS Linux"
[2025-11-26 17:16:12] VERSION="7 (Core)"
[2025-11-26 17:16:12] ID="centos"
[2025-11-26 17:16:12] ID_LIKE="rhel fedora"
[2025-11-26 17:16:12] VERSION_ID="7"
[2025-11-26 17:16:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 17:16:12] ANSI_COLOR="0;31"
[2025-11-26 17:16:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 17:16:12] HOME_URL="https://www.centos.org/"
[2025-11-26 17:16:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 17:16:12] 
[2025-11-26 17:16:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 17:16:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 17:16:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 17:16:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 17:16:12] 
[2025-11-26 17:16:12] 2025-11-26 16:15:25,468 | INFO     | ***************************************
[2025-11-26 17:16:12] 2025-11-26 16:15:25,971 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-11-26 17:16:12] 2025-11-26 16:15:25,980 | INFO     | sufficient remaining disk space (120813780992 B)
[2025-11-26 17:16:12] 2025-11-26 16:15:25,980 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 17:16:12] 2025-11-26 16:15:25,980 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 17:16:12] 2025-11-26 16:15:25,980 | INFO     | update_server=False
[2025-11-26 17:16:12] 2025-11-26 16:15:25,980 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 17:16:12] 2025-11-26 16:15:25,981 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 17:16:12] 2025-11-26 16:15:25,981 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 17:16:12] 2025-11-26 16:15:25,981 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 17:16:12] 2025-11-26 16:15:26,586 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 17:16:12] 2025-11-26 16:15:26,586 | INFO     | aborting loop
[2025-11-26 17:16:12] 2025-11-26 16:15:26,616 | INFO     | all data control threads have been joined
[2025-11-26 17:16:12] 2025-11-26 16:15:26,849 | INFO     | all payload control threads have been joined
[2025-11-26 17:16:12] 2025-11-26 16:15:26,986 | INFO     | [job] retrieve thread has finished
[2025-11-26 17:16:12] 2025-11-26 16:15:26,986 | INFO     | [job] queue monitor thread has finished
[2025-11-26 17:16:12] 2025-11-26 16:15:27,444 | INFO     | [payload] validate_post thread has finished
[2025-11-26 17:16:12] 2025-11-26 16:15:27,519 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 17:16:12] 2025-11-26 16:15:27,563 | INFO     | [data] copytool_in thread has finished
[2025-11-26 17:16:12] 2025-11-26 16:15:27,591 | INFO     | [job] job monitor thread has finished
[2025-11-26 17:16:12] 2025-11-26 16:15:27,619 | INFO     | all job control threads have been joined
[2025-11-26 17:16:12] 2025-11-26 16:15:27,621 | INFO     | [data] control thread has finished
[2025-11-26 17:16:12] 2025-11-26 16:15:27,664 | INFO     | [payload] failed_post thread has finished
[2025-11-26 17:16:12] 2025-11-26 16:15:27,850 | INFO     | [payload] control thread has finished
[2025-11-26 17:16:12] 2025-11-26 16:15:27,939 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 17:16:12] 2025-11-26 16:15:27,984 | INFO     | [data] copytool_out thread has finished
[2025-11-26 17:16:12] 2025-11-26 16:15:28,055 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 17:16:12] 2025-11-26 16:15:28,155 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 17:16:12] 2025-11-26 16:15:28,204 | INFO     | [job] validate thread has finished
[2025-11-26 17:16:12] 2025-11-26 16:15:28,625 | INFO     | [job] control thread has finished
[2025-11-26 17:16:12] 2025-11-26 16:15:29,986 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 17:16:12] 2025-11-26 16:15:56,715 | INFO     | PID=25156 has CPU usage=0.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 17:16:12] 2025-11-26 16:15:56,715 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 17:16:12] 2025-11-26 16:15:56,715 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 17:16:12] 2025-11-26 16:15:56,715 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 17:16:12] 2025-11-26 16:16:06,727 | INFO     | [monitor] cgroup control has ended
[2025-11-26 17:16:12] 2025-11-26 16:16:07,233 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140101273958208)>', '<ExcThread(monitor, started 140100717487872)>']
[2025-11-26 17:16:12] 2025-11-26 16:16:07,760 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 17:16:12] 2025-11-26 16:16:07,761 | INFO     | [monitor] control thread has ended
[2025-11-26 17:16:12] 2025-11-26 16:16:12,258 | INFO     | all workflow threads have been joined
[2025-11-26 17:16:12] 2025-11-26 16:16:12,258 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 17:16:12] 2025-11-26 16:16:12,258 | INFO     | traces error code: 0
[2025-11-26 17:16:12] 2025-11-26 16:16:12,258 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 17:16:12] 2025-11-26 16:16:12,294 [wrapper] ==== pilot stdout END ====
[2025-11-26 17:16:12] 2025-11-26 16:16:12,295 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 17:16:12] 2025-11-26 16:16:12,296 [wrapper] pilotpid: 25156
[2025-11-26 17:16:12] 2025-11-26 16:16:12,297 [wrapper] Pilot exit status: 0
[2025-11-26 17:16:12] 2025-11-26 16:16:12,301 [wrapper] pandaids: 6895674643
[2025-11-26 17:16:12] 2025-11-26 16:16:12,311 [wrapper] cleanup supervisor_pilot 32112 25157
[2025-11-26 17:16:12] 2025-11-26 16:16:12,313 [wrapper] Test setup, not cleaning
[2025-11-26 17:16:12] 2025-11-26 16:16:12,314 [wrapper] apfmon messages muted
[2025-11-26 17:16:12] 2025-11-26 16:16:12,315 [wrapper] ==== wrapper stdout END ====
[2025-11-26 17:16:12] 2025-11-26 16:16:12,316 [wrapper] ==== wrapper stderr END ====
[2025-11-26 17:16:12]  *** Error codes and diagnostics ***
[2025-11-26 17:16:12]     "exeErrorCode": 0,
[2025-11-26 17:16:12]     "exeErrorDiag": "",
[2025-11-26 17:16:12]     "pilotErrorCode": 0,
[2025-11-26 17:16:12]     "pilotErrorDiag": "",
[2025-11-26 17:16:12]  *** Listing of results directory ***
[2025-11-26 17:16:12] total 1309004
[2025-11-26 17:16:12] -rwx------ 1 boinc boinc     36292 Nov 24 16:13 runpilot2-wrapper.sh
[2025-11-26 17:16:12] -rw-r--r-- 1 boinc boinc      5112 Nov 24 16:13 queuedata.json
[2025-11-26 17:16:12] -rw-r--r-- 1 boinc boinc    576529 Nov 24 16:13 pilot3.tar.gz
[2025-11-26 17:16:12] -rw-r--r-- 1 boinc boinc       100 Nov 26 12:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 17:16:12] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 12:16 run_atlas
[2025-11-26 17:16:12] -rw-r--r-- 1 boinc boinc       105 Nov 26 12:16 job.xml
[2025-11-26 17:16:12] -rw-r--r-- 2 boinc boinc 409870083 Nov 26 12:16 EVNT.47483658._001365.pool.root.1
[2025-11-26 17:16:12] -rw-r--r-- 1 boinc boinc      7170 Nov 26 12:16 init_data.xml
[2025-11-26 17:16:12] drwxrwx--x 2 boinc boinc      4096 Nov 26 12:16 shared
[2025-11-26 17:16:12] -rw-r--r-- 2 boinc boinc    590097 Nov 26 12:16 input.tar.gz
[2025-11-26 17:16:12] -rw-r--r-- 2 boinc boinc     15847 Nov 26 12:16 start_atlas.sh
[2025-11-26 17:16:12] -rw-r--r-- 1 boinc boinc         0 Nov 26 12:16 boinc_lockfile
[2025-11-26 17:16:12] -rw-r--r-- 1 boinc boinc      2785 Nov 26 12:17 pandaJob.out
[2025-11-26 17:16:12] -rw------- 1 boinc boinc    991830 Nov 26 12:18 agis_schedconf.cvmfs.json
[2025-11-26 17:16:12] drwx------ 5 boinc boinc      4096 Nov 26 12:18 pilot3
[2025-11-26 17:16:12] -rw-r--r-- 1 boinc boinc       532 Nov 26 17:12 boinc_task_state.xml
[2025-11-26 17:16:12] -rw------- 1 boinc boinc 917744049 Nov 26 17:14 HITS.47556149._003515.pool.root.1
[2025-11-26 17:16:12] -rw------- 1 boinc boinc      1022 Nov 26 17:15 memory_monitor_summary.json
[2025-11-26 17:16:12] -rw------- 1 boinc boinc   1516240 Nov 26 17:15 agis_ddmendpoints.agis.ALL.json
[2025-11-26 17:16:12] -rw------- 1 boinc boinc   1980359 Nov 26 17:15 log.47556149._003515.job.log.tgz.1
[2025-11-26 17:16:12] -rw------- 1 boinc boinc      8562 Nov 26 17:15 heartbeat.json
[2025-11-26 17:16:12] -rw------- 1 boinc boinc        95 Nov 26 17:15 pilot_heartbeat.json
[2025-11-26 17:16:12] -rw-r--r-- 1 boinc boinc      8192 Nov 26 17:16 boinc_mmap_file
[2025-11-26 17:16:12] -rw-r--r-- 1 boinc boinc        29 Nov 26 17:16 wrapper_checkpoint.txt
[2025-11-26 17:16:12] -rw------- 1 boinc boinc      4747 Nov 26 17:16 pilotlog.txt
[2025-11-26 17:16:12] -rw------- 1 boinc boinc   2465176 Nov 26 17:16 log.47556149._003515.job.log.1
[2025-11-26 17:16:12] -rw------- 1 boinc boinc       353 Nov 26 17:16 output.list
[2025-11-26 17:16:12] -rw-r--r-- 1 boinc boinc       620 Nov 26 17:16 runtime_log
[2025-11-26 17:16:12] -rw------- 1 boinc boinc   4464640 Nov 26 17:16 result.tar.gz
[2025-11-26 17:16:12] -rw-r--r-- 1 boinc boinc      8767 Nov 26 17:16 runtime_log.err
[2025-11-26 17:16:12] -rw------- 1 boinc boinc       647 Nov 26 17:16 owvKDmvQnh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm45IKDmfyyydm.diag
[2025-11-26 17:16:12] -rw-r--r-- 1 boinc boinc     21474 Nov 26 17:16 stderr.txt
[2025-11-26 17:16:12] HITS file was successfully produced:
[2025-11-26 17:16:12] -rw------- 1 boinc boinc 917744049 Nov 26 17:14 shared/HITS.pool.root.1
[2025-11-26 17:16:12]  *** Contents of shared directory: ***
[2025-11-26 17:16:12] total 1301464
[2025-11-26 17:16:12] -rw-r--r-- 2 boinc boinc 409870083 Nov 26 12:16 ATLAS.root_0
[2025-11-26 17:16:12] -rw-r--r-- 2 boinc boinc    590097 Nov 26 12:16 input.tar.gz
[2025-11-26 17:16:12] -rw-r--r-- 2 boinc boinc     15847 Nov 26 12:16 start_atlas.sh
[2025-11-26 17:16:12] -rw------- 1 boinc boinc 917744049 Nov 26 17:14 HITS.pool.root.1
[2025-11-26 17:16:12] -rw------- 1 boinc boinc   4464640 Nov 26 17:16 result.tar.gz
17:16:13 (21122): run_atlas exited; CPU time 110268.397507
17:16:13 (21122): called boinc_finish(0)

</stderr_txt>
]]>

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