Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:29:59 (21698): wrapper (7.7.26015): starting
22:29:59 (21698): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 22:30:00] Arguments: --nthreads 8
[2025-11-27 22:30:00] Threads: 8
[2025-11-27 22:30:00] Checking for CVMFS
[2025-11-27 22:30:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 22:30:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 22:30:01] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 22:30:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 22:30:02] 2.11.2.0 11156 287205 141392 153385 3 84 15080462 25165824 1330 130560 14 141981654 99.878 78382169 2532 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-27 22:30:02] CVMFS is ok
[2025-11-27 22:30:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 22:30:02] Checking for apptainer binary...
[2025-11-27 22:30:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 22:30:02] Running /usr/bin/apptainer --version
[2025-11-27 22:30:02] apptainer version 1.3.2-1.el7
[2025-11-27 22:30:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 22:30:29] cg-vwn264.simple-grid.lan
[2025-11-27 22:30:29] apptainer works
[2025-11-27 22:30:29] Set ATHENA_PROC_NUMBER=8
[2025-11-27 22:30:29] Set ATHENA_CORE_NUMBER=8
[2025-11-27 22:30:29] Starting ATLAS job with PandaID=6895375683
[2025-11-27 22:30:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/27 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 21:19:23]  *** The last 200 lines of the pilot log: ***
[2025-11-28 21:19:23] 2025-11-28 20:18:38,135 | INFO     | time since job start (81845s) is within the limit (172800.0s)
[2025-11-28 21:19:23] 2025-11-28 20:18:39,604 | INFO     | monitor loop #5521: job 0:6895375683 is in state 'finished'
[2025-11-28 21:19:23] 2025-11-28 20:18:39,605 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 21:19:23] 2025-11-28 20:18:40,152 | INFO     | time since job start (81847s) is within the limit (172800.0s)
[2025-11-28 21:19:23] 2025-11-28 20:18:42,111 | INFO     | monitor loop #5522: job 0:6895375683 is in state 'finished'
[2025-11-28 21:19:23] 2025-11-28 20:18:42,112 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 21:19:23] 2025-11-28 20:18:42,159 | INFO     | time since job start (81849s) is within the limit (172800.0s)
[2025-11-28 21:19:23] 2025-11-28 20:18:44,165 | INFO     | time since job start (81851s) is within the limit (172800.0s)
[2025-11-28 21:19:23] 2025-11-28 20:18:44,620 | INFO     | monitor loop #5523: job 0:6895375683 is in state 'finished'
[2025-11-28 21:19:23] 2025-11-28 20:18:44,621 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 21:19:23] 2025-11-28 20:18:46,172 | INFO     | time since job start (81853s) is within the limit (172800.0s)
[2025-11-28 21:19:23] 2025-11-28 20:18:47,125 | INFO     | monitor loop #5524: job 0:6895375683 is in state 'finished'
[2025-11-28 21:19:23] 2025-11-28 20:18:47,126 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 21:19:23] 2025-11-28 20:18:47,956 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 21:19:23] 2025-11-28 20:18:47,957 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-28 21:19:23] 2025-11-28 20:18:47,959 | INFO     | using path: /var/lib/boinc/slots/27/PanDA_Pilot-6895375683/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 21:19:23] 2025-11-28 20:18:47,960 | INFO     | extracted standard info from prmon json
[2025-11-28 21:19:23] 2025-11-28 20:18:47,960 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 21:19:23] 2025-11-28 20:18:47,960 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 21:19:23] 2025-11-28 20:18:47,986 | INFO     | fitting pss+swap vs Time
[2025-11-28 21:19:23] 2025-11-28 20:18:47,988 | INFO     | sum of square deviations: 734461187516.9299
[2025-11-28 21:19:23] 2025-11-28 20:18:48,046 | INFO     | sum of deviations: 3247735332484.7607
[2025-11-28 21:19:23] 2025-11-28 20:18:48,047 | INFO     | mean x: 1764320364.0990248
[2025-11-28 21:19:23] 2025-11-28 20:18:48,047 | INFO     | mean y: 2828021.2063015755
[2025-11-28 21:19:23] 2025-11-28 20:18:48,047 | INFO     | intersect: -7798871621.601166
[2025-11-28 21:19:23] 2025-11-28 20:18:48,049 | INFO     | chi2: 23.696220925378277
[2025-11-28 21:19:23] 2025-11-28 20:18:48,051 | INFO     | sum of square deviations: 726227842745.8673
[2025-11-28 21:19:23] 2025-11-28 20:18:48,105 | INFO     | sum of deviations: 3684484021194.0205
[2025-11-28 21:19:23] 2025-11-28 20:18:48,105 | INFO     | mean x: 1764320211.6031628
[2025-11-28 21:19:23] 2025-11-28 20:18:48,105 | INFO     | mean y: 2836109.6603915663
[2025-11-28 21:19:23] 2025-11-28 20:18:48,105 | INFO     | intersect: -8948362460.946188
[2025-11-28 21:19:23] 2025-11-28 20:18:48,107 | INFO     | chi2: 20.52371038292182
[2025-11-28 21:19:23] 2025-11-28 20:18:48,107 | INFO     | current chi2=20.52371038292182 (change=13.388255251531476 %)
[2025-11-28 21:19:23] 2025-11-28 20:18:48,107 | INFO     | right removable region: 1327
[2025-11-28 21:19:23] 2025-11-28 20:18:48,109 | INFO     | sum of square deviations: 726226949095.8682
[2025-11-28 21:19:23] 2025-11-28 20:18:48,194 | INFO     | sum of deviations: 2681859488200.6387
[2025-11-28 21:19:23] 2025-11-28 20:18:48,195 | INFO     | mean x: 1764320516.6031628
[2025-11-28 21:19:23] 2025-11-28 20:18:48,195 | INFO     | mean y: 2838501.2763554216
[2025-11-28 21:19:23] 2025-11-28 20:18:48,195 | INFO     | intersect: -6512562398.635202
[2025-11-28 21:19:23] 2025-11-28 20:18:48,196 | INFO     | chi2: 18.779803470951318
[2025-11-28 21:19:23] 2025-11-28 20:18:48,197 | INFO     | current chi2=18.779803470951318 (change=20.74768575929993 %)
[2025-11-28 21:19:23] 2025-11-28 20:18:48,197 | INFO     | left removable region: 10
[2025-11-28 21:19:23] 2025-11-28 20:18:48,199 | INFO     | sum of square deviations: 708329794973.3682
[2025-11-28 21:19:23] 2025-11-28 20:18:48,217 | INFO     | time since job start (81855s) is within the limit (172800.0s)
[2025-11-28 21:19:23] 2025-11-28 20:18:48,257 | INFO     | sum of deviations: 2708994879185.658
[2025-11-28 21:19:23] 2025-11-28 20:18:48,258 | INFO     | mean x: 1764320486.1123767
[2025-11-28 21:19:23] 2025-11-28 20:18:48,258 | INFO     | mean y: 2858085.2050113897
[2025-11-28 21:19:23] 2025-11-28 20:18:48,258 | INFO     | intersect: -6744754673.764814
[2025-11-28 21:19:23] 2025-11-28 20:18:48,259 | INFO     | chi2: 10.910734480717144
[2025-11-28 21:19:23] 2025-11-28 20:18:48,260 | INFO     | current memory leak: 3.82 B/s (using 1317 data points, chi2=10.91)
[2025-11-28 21:19:23] 2025-11-28 20:18:48,261 | INFO     | could have reported an average CPU frequency of 1999 MHz (45 samples)
[2025-11-28 21:19:23] 2025-11-28 20:18:48,261 | INFO     | ..............................
[2025-11-28 21:19:23] 2025-11-28 20:18:48,261 | INFO     | . Timing measurements:
[2025-11-28 21:19:23] 2025-11-28 20:18:48,261 | INFO     | . get job = 0 s
[2025-11-28 21:19:23] 2025-11-28 20:18:48,261 | INFO     | . initial setup = 7 s
[2025-11-28 21:19:23] 2025-11-28 20:18:48,261 | INFO     | . payload setup = 135 s
[2025-11-28 21:19:23] 2025-11-28 20:18:48,261 | INFO     | . stage-in = 0 s
[2025-11-28 21:19:23] 2025-11-28 20:18:48,262 | INFO     | . payload execution = 81431 s
[2025-11-28 21:19:23] 2025-11-28 20:18:48,262 | INFO     | . stage-out = 5 s
[2025-11-28 21:19:23] 2025-11-28 20:18:48,262 | INFO     | . log creation = 1 s
[2025-11-28 21:19:23] 2025-11-28 20:18:48,262 | INFO     | ..............................
[2025-11-28 21:19:23] 2025-11-28 20:18:48,378 | INFO     | 
[2025-11-28 21:19:23] 2025-11-28 20:18:48,379 | INFO     | job summary report
[2025-11-28 21:19:23] 2025-11-28 20:18:48,379 | INFO     | --------------------------------------------------
[2025-11-28 21:19:23] 2025-11-28 20:18:48,379 | INFO     | PanDA job id: 6895375683
[2025-11-28 21:19:23] 2025-11-28 20:18:48,379 | INFO     | task id: 47556137
[2025-11-28 21:19:23] 2025-11-28 20:18:48,379 | INFO     | errors: (none)
[2025-11-28 21:19:23] 2025-11-28 20:18:48,379 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 21:19:23] 2025-11-28 20:18:48,379 | INFO     | pilot state: finished 
[2025-11-28 21:19:23] 2025-11-28 20:18:48,379 | INFO     | transexitcode: 0
[2025-11-28 21:19:23] 2025-11-28 20:18:48,379 | INFO     | exeerrorcode: 0
[2025-11-28 21:19:23] 2025-11-28 20:18:48,379 | INFO     | exeerrordiag: 
[2025-11-28 21:19:23] 2025-11-28 20:18:48,379 | INFO     | exitcode: 0
[2025-11-28 21:19:23] 2025-11-28 20:18:48,380 | INFO     | exitmsg: OK
[2025-11-28 21:19:23] 2025-11-28 20:18:48,380 | INFO     | cpuconsumptiontime: 308097 s
[2025-11-28 21:19:23] 2025-11-28 20:18:48,380 | INFO     | nevents: 1000
[2025-11-28 21:19:23] 2025-11-28 20:18:48,380 | INFO     | neventsw: 0
[2025-11-28 21:19:23] 2025-11-28 20:18:48,380 | INFO     | pid: 32048
[2025-11-28 21:19:23] 2025-11-28 20:18:48,380 | INFO     | pgrp: 32048
[2025-11-28 21:19:23] 2025-11-28 20:18:48,380 | INFO     | corecount: 8
[2025-11-28 21:19:23] 2025-11-28 20:18:48,380 | INFO     | event service: False
[2025-11-28 21:19:23] 2025-11-28 20:18:48,380 | INFO     | sizes: {0: 2284088, 1: 2284343, 2: 2284343, 12: 2284371, 23: 2284399, 34: 2284427, 45: 2284583, 55: 2284611, 66: 2284639, 77: 2284667, 86: 2284985, 87: 2285293, 81
[2025-11-28 21:19:23] 2025-11-28 20:18:48,380 | INFO     | --------------------------------------------------
[2025-11-28 21:19:23] 2025-11-28 20:18:48,380 | INFO     | 
[2025-11-28 21:19:23] 2025-11-28 20:18:48,381 | INFO     | executing command: ls -lF /var/lib/boinc/slots/27
[2025-11-28 21:19:23] 2025-11-28 20:18:48,547 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 21:19:23] 2025-11-28 20:18:48,547 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 21:19:23] 2025-11-28 20:18:48,547 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 21:19:23] 2025-11-28 20:18:48,548 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 21:19:23] 2025-11-28 20:18:48,548 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 21:19:23] 2025-11-28 20:18:48,548 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 21:19:23] 2025-11-28 20:18:48,548 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 21:19:23] 2025-11-28 20:18:48,548 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 21:19:23] 2025-11-28 20:18:48,548 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 21:19:23] 2025-11-28 20:18:48,548 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 21:19:23] 2025-11-28 20:18:48,548 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 21:19:23] 2025-11-28 20:18:48,548 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 21:19:23] 2025-11-28 20:18:48,548 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 21:19:23] 2025-11-28 20:18:48,548 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 21:19:23] 2025-11-28 20:18:48,548 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 21:19:23] 2025-11-28 20:18:48,549 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 21:19:23] 2025-11-28 20:18:48,549 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 21:19:23] 2025-11-28 20:18:48,549 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 21:19:23] 2025-11-28 20:18:48,549 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 21:19:23] 2025-11-28 20:18:48,549 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 21:19:23] 2025-11-28 20:18:48,549 | INFO     | job 6895375683 has completed (purged errors)
[2025-11-28 21:19:23] 2025-11-28 20:18:48,549 | INFO     | overall cleanup function is called
[2025-11-28 21:19:23] 2025-11-28 20:18:49,564 | INFO     | --- collectZombieJob: --- 10, [32048]
[2025-11-28 21:19:23] 2025-11-28 20:18:49,565 | INFO     | zombie collector waiting for pid 32048
[2025-11-28 21:19:23] 2025-11-28 20:18:49,565 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 21:19:23] 2025-11-28 20:18:49,565 | INFO     | collected zombie processes
[2025-11-28 21:19:23] 2025-11-28 20:18:49,565 | INFO     | will attempt to kill all subprocesses of pid=32048
[2025-11-28 21:19:23] 2025-11-28 20:18:49,675 | INFO     | process IDs to be killed: [32048] (in reverse order)
[2025-11-28 21:19:23] 2025-11-28 20:18:50,566 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 21:19:23] 2025-11-28 20:18:50,566 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 21:19:23] 2025-11-28 20:18:50,569 | INFO     | did not find any defunct processes belonging to 32048
[2025-11-28 21:19:23] 2025-11-28 20:18:50,572 | INFO     | did not find any defunct processes belonging to 32048
[2025-11-28 21:19:23] 2025-11-28 20:18:50,634 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 21:19:23] 2025-11-28 20:18:50,634 | INFO     | ready for new job
[2025-11-28 21:19:23] 2025-11-28 20:18:50,634 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 21:19:23] 2025-11-28 20:18:50,639 | INFO     | ***************************************
[2025-11-28 21:19:23] 2025-11-28 20:18:50,639 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 21:19:23] 2025-11-28 20:18:50,639 | INFO     | ***************************************
[2025-11-28 21:19:23] 2025-11-28 20:18:50,639 | INFO     | 
[2025-11-28 21:19:23] 2025-11-28 20:18:50,640 | INFO     | pilot is running in a VM
[2025-11-28 21:19:23] 2025-11-28 20:18:50,640 | INFO     | architecture information:
[2025-11-28 21:19:23] 2025-11-28 20:18:50,653 | INFO     | executing command: cat /etc/os-release
[2025-11-28 21:19:23] 2025-11-28 20:18:50,968 | INFO     | cat /etc/os-release:
[2025-11-28 21:19:23] NAME="CentOS Linux"
[2025-11-28 21:19:23] VERSION="7 (Core)"
[2025-11-28 21:19:23] ID="centos"
[2025-11-28 21:19:23] ID_LIKE="rhel fedora"
[2025-11-28 21:19:23] VERSION_ID="7"
[2025-11-28 21:19:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 21:19:23] ANSI_COLOR="0;31"
[2025-11-28 21:19:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 21:19:23] HOME_URL="https://www.centos.org/"
[2025-11-28 21:19:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 21:19:23] 
[2025-11-28 21:19:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 21:19:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 21:19:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 21:19:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 21:19:23] 
[2025-11-28 21:19:23] 2025-11-28 20:18:50,968 | INFO     | ***************************************
[2025-11-28 21:19:23] 2025-11-28 20:18:51,471 | INFO     | executing command: df -mP /var/lib/boinc/slots/27
[2025-11-28 21:19:23] 2025-11-28 20:18:51,717 | INFO     | sufficient remaining disk space (494791557120 B)
[2025-11-28 21:19:23] 2025-11-28 20:18:51,717 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 21:19:23] 2025-11-28 20:18:51,718 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 21:19:23] 2025-11-28 20:18:51,718 | INFO     | update_server=False
[2025-11-28 21:19:23] 2025-11-28 20:18:51,718 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 21:19:23] 2025-11-28 20:18:51,971 | INFO     | all data control threads have been joined
[2025-11-28 21:19:23] 2025-11-28 20:18:52,185 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-28 21:19:23] 2025-11-28 20:18:52,186 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-28 21:19:23] 2025-11-28 20:18:52,186 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 21:19:23] 2025-11-28 20:18:52,186 | INFO     | will abort loop
[2025-11-28 21:19:23] 2025-11-28 20:18:52,723 | INFO     | all payload control threads have been joined
[2025-11-28 21:19:23] 2025-11-28 20:18:52,726 | INFO     | [job] retrieve thread has finished
[2025-11-28 21:19:23] 2025-11-28 20:18:52,728 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 21:19:23] 2025-11-28 20:18:52,977 | INFO     | [data] control thread has finished
[2025-11-28 21:19:23] 2025-11-28 20:18:53,114 | INFO     | [payload] failed_post thread has finished
[2025-11-28 21:19:23] 2025-11-28 20:18:53,163 | INFO     | [data] copytool_in thread has finished
[2025-11-28 21:19:23] 2025-11-28 20:18:53,179 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 21:19:23] 2025-11-28 20:18:53,191 | INFO     | [job] job monitor thread has finished
[2025-11-28 21:19:23] 2025-11-28 20:18:53,338 | INFO     | [payload] validate_post thread has finished
[2025-11-28 21:19:23] 2025-11-28 20:18:53,362 | INFO     | all job control threads have been joined
[2025-11-28 21:19:23] 2025-11-28 20:18:53,391 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 21:19:23] 2025-11-28 20:18:53,425 | INFO     | [job] validate thread has finished
[2025-11-28 21:19:23] 2025-11-28 20:18:53,729 | INFO     | [payload] control thread has finished
[2025-11-28 21:19:23] 2025-11-28 20:18:53,779 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 21:19:23] 2025-11-28 20:18:54,002 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 21:19:23] 2025-11-28 20:18:54,125 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 21:19:23] 2025-11-28 20:18:54,368 | INFO     | [job] control thread has finished
[2025-11-28 21:19:23] 2025-11-28 20:18:54,397 | INFO     | [job] queue monitor thread has finished
[2025-11-28 21:19:23] 2025-11-28 20:18:54,735 | INFO     | [data] copytool_out thread has finished
[2025-11-28 21:19:23] 2025-11-28 20:18:55,136 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 21:19:23] 2025-11-28 20:18:55,161 | INFO     | [monitor] cgroup control has ended
[2025-11-28 21:19:23] 2025-11-28 20:18:59,145 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 21:19:23] 2025-11-28 20:19:00,266 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140313286666048)>', '<ExcThread(monitor, started 140312974432000)>']
[2025-11-28 21:19:23] 2025-11-28 20:19:05,292 | INFO     | all workflow threads have been joined
[2025-11-28 21:19:23] 2025-11-28 20:19:05,293 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 21:19:23] 2025-11-28 20:19:05,293 | INFO     | traces error code: 0
[2025-11-28 21:19:23] 2025-11-28 20:19:05,293 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 21:19:23] 2025-11-28 20:19:21,413 | INFO     | PID=25448 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-28 21:19:23] 2025-11-28 20:19:21,413 | INFO     | .. there are 9 such processes running
[2025-11-28 21:19:23] 2025-11-28 20:19:21,414 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 21:19:23] 2025-11-28 20:19:21,414 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 21:19:23] 2025-11-28 20:19:21,414 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 21:19:23] 2025-11-28 20:19:21,414 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 21:19:23] 2025-11-28 20:19:21,414 | INFO     | [monitor] control thread has ended
[2025-11-28 21:19:23] 2025-11-28 20:19:21,662 [wrapper] ==== pilot stdout END ====
[2025-11-28 21:19:23] 2025-11-28 20:19:21,727 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 21:19:23] 2025-11-28 20:19:21,805 [wrapper] pilotpid: 25448
[2025-11-28 21:19:23] 2025-11-28 20:19:21,915 [wrapper] Pilot exit status: 0
[2025-11-28 21:19:23] 2025-11-28 20:19:22,289 [wrapper] pandaids: 6895375683
[2025-11-28 21:19:23] 2025-11-28 20:19:23,060 [wrapper] cleanup supervisor_pilot 21459 25449
[2025-11-28 21:19:23] 2025-11-28 20:19:23,174 [wrapper] Test setup, not cleaning
[2025-11-28 21:19:23] 2025-11-28 20:19:23,300 [wrapper] apfmon messages muted
[2025-11-28 21:19:23] 2025-11-28 20:19:23,346 [wrapper] ==== wrapper stdout END ====
[2025-11-28 21:19:23] 2025-11-28 20:19:23,351 [wrapper] ==== wrapper stderr END ====
[2025-11-28 21:19:23]  *** Error codes and diagnostics ***
[2025-11-28 21:19:23]     "exeErrorCode": 0,
[2025-11-28 21:19:23]     "exeErrorDiag": "",
[2025-11-28 21:19:23]     "pilotErrorCode": 0,
[2025-11-28 21:19:23]     "pilotErrorDiag": "",
[2025-11-28 21:19:23]  *** Listing of results directory ***
[2025-11-28 21:19:23] total 1317872
[2025-11-28 21:19:23] -rw-r--r--. 1 boinc boinc    576529 Nov 24 00:11 pilot3.tar.gz
[2025-11-28 21:19:23] -rw-r--r--. 1 boinc boinc      5112 Nov 24 01:02 queuedata.json
[2025-11-28 21:19:23] -rwx------. 1 boinc boinc     36292 Nov 24 01:03 runpilot2-wrapper.sh
[2025-11-28 21:19:23] -rw-r--r--. 1 boinc boinc       100 Nov 27 22:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 21:19:23] -rwxr-xr-x. 1 boinc boinc      7986 Nov 27 22:29 run_atlas
[2025-11-28 21:19:23] -rw-r--r--. 1 boinc boinc       105 Nov 27 22:29 job.xml
[2025-11-28 21:19:23] -rw-r--r--. 2 boinc boinc 409491341 Nov 27 22:29 EVNT.47483658._000955.pool.root.1
[2025-11-28 21:19:23] -rw-r--r--. 2 boinc boinc     15847 Nov 27 22:29 start_atlas.sh
[2025-11-28 21:19:23] drwxrwx--x. 2 boinc boinc        68 Nov 27 22:29 shared
[2025-11-28 21:19:23] -rw-r--r--. 2 boinc boinc    590103 Nov 27 22:29 input.tar.gz
[2025-11-28 21:19:23] -rw-r--r--. 1 boinc boinc      6392 Nov 27 22:29 init_data.xml
[2025-11-28 21:19:23] -rw-r--r--. 1 boinc boinc         0 Nov 27 22:29 boinc_lockfile
[2025-11-28 21:19:23] -rw-r--r--. 1 boinc boinc      2785 Nov 27 22:30 pandaJob.out
[2025-11-28 21:19:23] -rw-------. 1 boinc boinc    991540 Nov 27 22:34 agis_schedconf.cvmfs.json
[2025-11-28 21:19:23] drwx------. 5 boinc boinc      4096 Nov 27 22:34 pilot3
[2025-11-28 21:19:23] -rw-r--r--. 1 boinc boinc       533 Nov 28 20:54 boinc_task_state.xml
[2025-11-28 21:19:23] -rw-------. 1 boinc boinc 909384826 Nov 28 21:15 HITS.47556137._009414.pool.root.1
[2025-11-28 21:19:23] -rw-------. 1 boinc boinc      1033 Nov 28 21:16 memory_monitor_summary.json
[2025-11-28 21:19:23] -rw-------. 1 boinc boinc   1516240 Nov 28 21:17 agis_ddmendpoints.agis.ALL.json
[2025-11-28 21:19:23] -rw-------. 1 boinc boinc   2432957 Nov 28 21:17 log.47556137._009414.job.log.tgz.1
[2025-11-28 21:19:23] -rw-------. 1 boinc boinc        95 Nov 28 21:18 pilot_heartbeat.json
[2025-11-28 21:19:23] -rw-------. 1 boinc boinc      8640 Nov 28 21:18 heartbeat.json
[2025-11-28 21:19:23] -rw-r--r--. 1 boinc boinc        29 Nov 28 21:18 wrapper_checkpoint.txt
[2025-11-28 21:19:23] -rw-r--r--. 1 boinc boinc      8192 Nov 28 21:18 boinc_mmap_file
[2025-11-28 21:19:23] -rw-------. 1 boinc boinc       820 Nov 28 21:19 pilotlog.txt
[2025-11-28 21:19:23] -rw-------. 1 boinc boinc  10931740 Nov 28 21:19 log.47556137._009414.job.log.1
[2025-11-28 21:19:23] -rw-------. 1 boinc boinc       353 Nov 28 21:19 output.list
[2025-11-28 21:19:23] -rw-r--r--. 1 boinc boinc       620 Nov 28 21:19 runtime_log
[2025-11-28 21:19:23] -rw-------. 1 boinc boinc  13383680 Nov 28 21:19 result.tar.gz
[2025-11-28 21:19:23] -rw-r--r--. 1 boinc boinc      8833 Nov 28 21:19 runtime_log.err
[2025-11-28 21:19:23] -rw-------. 1 boinc boinc       662 Nov 28 21:19 hfLODmzDZh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmbILKDmUF4Urm.diag
[2025-11-28 21:19:23] -rw-r--r--. 1 boinc boinc     21422 Nov 28 21:19 stderr.txt
[2025-11-28 21:19:23] HITS file was successfully produced:
[2025-11-28 21:19:23] -rw-------. 1 boinc boinc 909384826 Nov 28 21:15 shared/HITS.pool.root.1
[2025-11-28 21:19:23]  *** Contents of shared directory: ***
[2025-11-28 21:19:23] total 1301636
[2025-11-28 21:19:23] -rw-r--r--. 2 boinc boinc 409491341 Nov 27 22:29 ATLAS.root_0
[2025-11-28 21:19:23] -rw-r--r--. 2 boinc boinc     15847 Nov 27 22:29 start_atlas.sh
[2025-11-28 21:19:23] -rw-r--r--. 2 boinc boinc    590103 Nov 27 22:29 input.tar.gz
[2025-11-28 21:19:23] -rw-------. 1 boinc boinc 909384826 Nov 28 21:15 HITS.pool.root.1
[2025-11-28 21:19:23] -rw-------. 1 boinc boinc  13383680 Nov 28 21:19 result.tar.gz
21:19:25 (21698): run_atlas exited; CPU time 308635.598723
21:19:25 (21698): called boinc_finish(0)

</stderr_txt>
]]>

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